Pregenerated sensors for CEPT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040774Ensembl transcript IDs: ENSMUST00000039153.14, ENSMUST00000068301.11, ENSMUST00000121231.8, ENSMUST00000137530.2, ENSMUST00000141525.2, ENSMUST00000148269.2, ENSMUST00000192438.6
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACTCGGTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTaGCAACATATTCAGTTTATAGGATGGGGCCTGAAATTCCCATTC | + |
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Preference number: 1 (lower is better) Translates to: TLGSFPACFLEPNPV*QHIQFIGWGLKFPF Trigger: GAATGGGAATTTCAGGCCCCATCCTATAAACTGAATATGTTGTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTACCGAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| 3UTR-3UTR GCA 90 bp | ATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCGTTCGAATTCCTTCTTaGAGGAACCATGAGCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: ITALTSQASKMYVPQAELVRIPS*RNHELS Trigger: ACTAAGCTCATGGTTCCTGCAAGAAGGAATTCGAAC...GAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGGGGATGTGCTCCTATGATAGTGATATTCTGAATAATCACAAACACTCGTCCCTGCATGCTTTCTaGAGCCAAACCCTGTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: PVGMCSYDSDILNNHKHSSLHAF*SQTLFD Trigger: GTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGA...CGAGTGTTTGTGATTATTCAGAATATCACTATCATAGGAGCACATCCCCACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTTATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGGTTCGAATTCCTTCTTaGAGGAACCATGAGCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: SLSLLSPHKLVRCMCHKLVRIPS*RNHELS Trigger: ACTAAGCTCATGGTTCCTGCAAGAAGGAATTCGAAC...CAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGATAAGGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| 3UTR-3UTR CCA 90 bp | ATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCATTCAGTTTATAGGATaGGGCCTGAAATTCCCATTC | + |
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Preference number: 2 (lower is better) Translates to: ITALTSQASKMYVPQAELIQFIG*GLKFPF Trigger: GAATGGGAATTTCAGGCCCCATCCTATAAACTGAAT...GAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGTCAGAGATTATCTTTATATCCTGACCCCTCCGATTTTCTGTGTCTTATATTCCTGCTTCTACCTCTaGGTGCTGGGATTCACTATC | + |
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Preference number: 2 (lower is better) Translates to: LVRDYLYILTPPIFCVLYSCFYL*VLGFTI Trigger: GATAGTGAATCCCAGCACTCAGAGGTAGAAGCAGGA...ATATAAGACACAGAAAATCGGAGGGGTCAGGATATAAAGATAATCTCTGACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068301.11 |
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| 3UTR-3UTR GCA 90 bp | GATTACCTCTTCTTTCTCCTGCCTTGTCAGAGATTATCTTTATATCCTGACCCCATAACCTTGAACTTCTaGTCCTCTTCCTGCTTCTAC | + |
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Preference number: 2 (lower is better) Translates to: DYLFFLLPCQRLSLYPDPITLNF*SSSCFY Trigger: GTAGAAGCAGGAAGAGGAGCAGAAGTTCAAGGTTAT...GGGGTCAGGATATAAAGATAATCTCTGACAAGGCAGGAGAAAGAAGAGGTAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068301.11 |
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| 3UTR-3UTR CCA 90 bp | ATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTCTCATCCCTGCATGCTTTCTaGAGCCAAACCCTGTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: IYRQETFHLNLRSLSLLSSLHAF*SQTLFD Trigger: GTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGA...TGAGAGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGGGGATGTGCTCCTATGATAGTGATATTCTGAATAATCACAAACACTCGATTCAGTTTATAGGATaGGGCCTGAAATTCCCATTC | + |
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Preference number: 2 (lower is better) Translates to: PVGMCSYDSDILNNHKHSIQFIG*GLKFPF Trigger: GAATGGGAATTTCAGGCCCCATCCTATAAACTGAAT...CGAGTGTTTGTGATTATTCAGAATATCACTATCATAGGAGCACATCCCCACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| 3UTR-3UTR CCA 90 bp | GATATTCTGAATAATCACAAACACTCGGTAGTTTCCCTGCATGCTTTCTGGAGCATTCAGTTTATAGGATaGGGCCTGAAATTCCCATTC | + |
|
Preference number: 2 (lower is better) Translates to: DILNNHKHSVVSLHAFWSIQFIG*GLKFPF Trigger: GAATGGGAATTTCAGGCCCCATCCTATAAACTGAAT...GCTCCAGAAAGCATGCAGGGAAACTACCGAGTGTTTGTGATTATTCAGAATATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| 3UTR-3UTR GCA 90 bp | ATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTCTCACCACCAGTGGGGATGTaGTCCTATGATAGTGATATT | + |
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Preference number: 2 (lower is better) Translates to: IYRQETFHLNLRSLSLLSPPVGM*SYDSDI Trigger: AATATCACTATCATAGGAGCACATCCCCACTGGTGG...TGAGAGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| 3UTR-3UTR GCA 90 bp | AATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTCTCCTAGTAAGATGTATGTaGCACAAGCTGAGCTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: NIQTGNLPSKFKVLITALLVRCM*HKLSSL Trigger: TAAGGAGCTCAGCTTGTGGCACATACATCTTACTAG...GAGAGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGTCAGAGATTATCTTTATATCCTGACCCCTCCGATTTTCTGTGTCTTATATACCACATTATCTGCATaGTATCAAGATTTCCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: LVRDYLYILTPPIFCVLYTTLSA*YQDFPS Trigger: GCTTGGGAAATCTTGATAGCATGCAGATAATGTGGT...ATATAAGACACAGAAAATCGGAGGGGTCAGGATATAAAGATAATCTCTGACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068301.11 |
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| 3UTR TCA 72 bp | AGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTaGCAACATATTCAGTTTATAGGATGGGGCCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: SFPACFLEPNPV*QHIQFIGWGLK Trigger: TTTCAGGCCCCATCCTATAAACTGAATATGTTGTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| 3UTR TCA 72 bp | ACCTTGAACTTCTGCTCCTCTTCCTGCTTCTACCTCTaGGTGCTGGGATTCACTATCCTTTATACTAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: TLNFCSSSCFYL*VLGFTILYTKE Trigger: TTCTTTAGTATAAAGGATAGTGAATCCCAGCACTCAGAGGTAGAAGCAGGAAGAGGAGCAGAAGTTCAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068301.11 |
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| 3UTR CCA 72 bp | AATCACAAACACTCGGTAGTTTCCCTGCATGCTTTCTaGAGCCAAACCCTGTTTGACAACATATTCAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: NHKHSVVSLHAF*SQTLFDNIFSL Trigger: TAAACTGAATATGTTGTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTACCGAGTGTTTGTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| 3UTR-3UTR CAA 90 bp | AGTAAGATGTATGTGCCACAAGCTGAGCTCCTTACAAAAGAACATCTGAGAAGATCTTATCCACCCCTGTaGTCCTTAATATGTTCGAAT | + |
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Preference number: 3 (lower is better) Translates to: SKMYVPQAELLTKEHLRRSYPPL*SLICSN Trigger: ATTCGAACATATTAAGGACAACAGGGGTGGATAAGA...TCTTCTCAGATGTTCTTTTGTAAGGAGCTCAGCTTGTGGCACATACATCTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| 3UTR-3UTR CAA 90 bp | AATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTCTCTCTTATCCACCCCTGTaGTCCTTAATATGTTCGAAT | + |
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Preference number: 3 (lower is better) Translates to: NIQTGNLPSKFKVLITALSYPPL*SLICSN Trigger: ATTCGAACATATTAAGGACAACAGGGGTGGATAAGA...GAGAGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| 3UTR-3UTR CAA 90 bp | AACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTTCTTATCCACCCCTGTaGTCCTTAATATGTTCGAAT | + |
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Preference number: 3 (lower is better) Translates to: NNIQTGNLPSKFKVLITASYPPL*SLICSN Trigger: ATTCGAACATATTAAGGACAACAGGGGTGGATAAGA...AGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR GCA 90 bp | GTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTGACAACATATTCAGTGCCCACAGAGGTGCCTaGTCTGTAGCTGTAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VVSLHAFWSQTLFDNIFSAHRGA*SVAVGQ Trigger: CTGCCCTACAGCTACAGAGCAGGCACCTCTGTGGGC...ACTGAATATGTTGTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR TCA 90 bp | ATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCACAGGGGACTCTGGGTaGGAATCTCCACATCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: ITALTSQASKMYVPQAELTGDSG*ESPHRF Trigger: GAAACGATGTGGAGATTCTCACCCAGAGTCCCCTGT...GAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR TCA 90 bp | CACAAACACTCGGTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTGACCCAGAGACTGGTAAATaGAAAGGCCACAAGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: HKHSVVSLHAFWSQTLFDPETGK*KGHKHR Trigger: CCTGTGCTTGTGGCCTTTTCATTTACCAGTCTCTGG...GTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTACCGAGTGTTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR GCA 90 bp | GATATTCTGAATAATCACAAACACTCGGTAGTTTCCCTGCATGCTTTCTGGAGCGCCCACAGAGGTGCCTaGTCTGTAGCTGTAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: DILNNHKHSVVSLHAFWSAHRGA*SVAVGQ Trigger: CTGCCCTACAGCTACAGAGCAGGCACCTCTGTGGGC...GCTCCAGAAAGCATGCAGGGAAACTACCGAGTGTTTGTGATTATTCAGAATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR GCA 90 bp | ACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCCTTACAAAAGAAGCCCACAGAGGTGCCTaGTCTGTAGCTGTAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TSQASKMYVPQAELLTKEAHRGA*SVAVGQ Trigger: CTGCCCTACAGCTACAGAGCAGGCACCTCTGTGGGC...TTCTTTTGTAAGGAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR CCA 90 bp | GTGTCTTATATAGCCCAGACTAGCCTACAACTCCAGTCAAGGATAACCTTGAACGCCCACAGGGGACTCTaGGTGAGAATCTCCACATCG | + |
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Preference number: 4 (lower is better) Translates to: VSYIAQTSLQLQSRITLNAHRGL*VRISTS Trigger: CGATGTGGAGATTCTCACCCAGAGTCCCCTGTGGGC...GTTCAAGGTTATCCTTGACTGGAGTTGTAGGCTAGTCTGGGCTATATAAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068301.11 |
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| CDS-3UTR TCA 90 bp | TCCTTATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGACAGGGGACTCTGGGTaGGAATCTCCACATCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: SLSLLSPHKLVRCMCHKLTGDSG*ESPHRF Trigger: GAAACGATGTGGAGATTCTCACCCAGAGTCCCCTGT...CAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGATAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR TCA 90 bp | ATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCTCAACACAGGAATCGTaGAGTTCCAGAACCAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: ITALTSQASKMYVPQAELSTQES*SSRTKA Trigger: GGCCTTGGTTCTGGAACTTCACGATTCCTGTGTTGA...GAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039153.14 |
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| CDS-3UTR TCA 90 bp | GTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTGACAACATATTCAGTACAGGGGACTCTGGGTaGGAATCTCCACATCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: VVSLHAFWSQTLFDNIFSTGDSG*ESPHRF Trigger: GAAACGATGTGGAGATTCTCACCCAGAGTCCCCTGT...ACTGAATATGTTGTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR TCA 90 bp | GTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTGACAACATATTCAGTGACCGTCCAGCACTCTaGTACCTGTGTTCTTCTAGC | + |
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Preference number: 4 (lower is better) Translates to: VVSLHAFWSQTLFDNIFSDRPAL*YLCSSS Trigger: GCTAGAAGAACACAGGTATCAGAGTGCTGGACGGTC...ACTGAATATGTTGTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR TCA 90 bp | ATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCTGTTCCTGCTATGGTTaGCCCATTTTTGCCAACACC | + |
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Preference number: 4 (lower is better) Translates to: ITALTSQASKMYVPQAELCSCYG*PIFANT Trigger: GGTGTTGGCAAAAATGGGTCAACCATAGCAGGAACA...GAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR GCA 90 bp | GTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTGACAACATATTCAGTCCTGTAGTACTCATATaGCCAAAGCCCACAGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: VVSLHAFWSQTLFDNIFSPVVLI*PKPTGD Trigger: GTCCCCTGTGGGCTTTGGGCATATGAGTACTACAGG...ACTGAATATGTTGTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR GCA 90 bp | GCGCAGTCTAAATACCAAAATGGAGAGTACAAAGTGACAACCCACCTCCACCCCGTCCAGAAACAGAAGTaGTGGACCTATGAATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: AQSKYQNGEYKVTTHLHPVQKQK*WTYECC Trigger: ACAGCATTCATAGGTCCAGCACTTCTGTTTCTGGAC...GGGGTGGAGGTGGGTTGTCACTTTGTACTCTCCATTTTGGTATTTAGACTGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068301.11 |
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| CDS-3UTR GCA 90 bp | CACAAACACTCGGTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTGACGTCCAGAAACAGAAGTaGTGGACCTATGAATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HKHSVVSLHAFWSQTLFDVQKQK*WTYECC Trigger: ACAGCATTCATAGGTCCAGCACTTCTGTTTCTGGAC...GTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTACCGAGTGTTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR GCA 90 bp | ACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCCTTACAAAAGAACCTGTAGTACTCATATaGCCAAAGCCCACAGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: TSQASKMYVPQAELLTKEPVVLI*PKPTGD Trigger: GTCCCCTGTGGGCTTTGGGCATATGAGTACTACAGG...TTCTTTTGTAAGGAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR CCA 90 bp | AAACCCTGTTTGACAACATATTCAGTTTATAGGATGGGGCCTGAAATTCCCATTGCCCACAGGGGACTCTaGGTGAGAATCTCCACATCG | + |
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Preference number: 4 (lower is better) Translates to: KPCLTTYSVYRMGPEIPIAHRGL*VRISTS Trigger: CGATGTGGAGATTCTCACCCAGAGTCCCCTGTGGGC...AATGGGAATTTCAGGCCCCATCCTATAAACTGAATATGTTGTCAAACAGGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR CCA 90 bp | ATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCTCTAGCCGTTTTAACTaGTGTCTTGACAGTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: ITALTSQASKMYVPQAELSSRFN*CLDSGG Trigger: ACCACCACTGTCAAGACACCAGTTAAAACGGCTAGA...GAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR GCA 90 bp | CACAAACACTCGGTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTGACTGCCACAGTACAAAGTaGAGGAAGAAGTTTCATTTG | + |
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Preference number: 4 (lower is better) Translates to: HKHSVVSLHAFWSQTLFDCHSTK*RKKFHL Trigger: CAAATGAAACTTCTTCCTGCACTTTGTACTGTGGCA...GTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTACCGAGTGTTTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR GCA 90 bp | GTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTGACAACATATTCAGTGGAAAATATGGTCCCTaGCACAGTACAAAGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VVSLHAFWSQTLFDNIFSGKYGP*HSTKCR Trigger: CCTGCACTTTGTACTGTGGCAGGGACCATATTTTCC...ACTGAATATGTTGTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR GCA 90 bp | ATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCTGCTGGACCTATGAATaGTGTGTCATGCAAATGCAT | + |
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Preference number: 4 (lower is better) Translates to: ITALTSQASKMYVPQAELCWTYE*CVMQMH Trigger: ATGCATTTGCATGACACAGCATTCATAGGTCCAGCA...GAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR TCA 90 bp | TCCTTATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGGTGCACAATAGAACATaGATGTCCCAGCAAAACAAC | + |
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Preference number: 4 (lower is better) Translates to: SLSLLSPHKLVRCMCHKLVHNRT*MSQQNN Trigger: GTTGTTTTGCTGGGACATTCATGTTCTATTGTGCAC...CAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGATAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS-3UTR TCA 90 bp | GTGTCTTATATAGCCCAGACTAGCCTACAACTCCAGTCAAGGATAACCTTGAACTGCCAACACCACCTGTaGAGATTACACGGAAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: VSYIAQTSLQLQSRITLNCQHHL*RLHGSN Trigger: ATTACTTCCGTGTAATCTTCACAGGTGGTGTTGGCA...GTTCAAGGTTATCCTTGACTGGAGTTGTAGGCTAGTCTGGGCTATATAAGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068301.11 |
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| CDS-3UTR TCA 90 bp | ATGTTCGAATTCCTTCTTGCAGGAACCATGAGCTTAGTAGAACCCAGACACATCTGCCAACACCACCTGTaGAGATTACACGGAAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: MFEFLLAGTMSLVEPRHICQHHL*RLHGSN Trigger: ATTACTTCCGTGTAATCTTCACAGGTGGTGTTGGCA...GATGTGTCTGGGTTCTACTAAGCTCATGGTTCCTGCAAGAAGGAATTCGAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR TCA 90 bp | ATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCTCACTTTTCGTCATGTaGGCAACCACAAGCTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: ITALTSQASKMYVPQAELSLFVM*ATTSLL Trigger: TAATAAGCTTGTGGTTGCTCACATGACGAAAAGTGA...GAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | ATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCTGTCCCAAGTTGTACTaGAATACAAGTTCCAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ITALTSQASKMYVPQAELCPKLY*NTSSKN Trigger: GTTCTTGGAACTTGTATTGCAGTACAACTTGGGACA...GAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | ACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCCTTACAAAAGAAGGAAAATATGGTCCCTaGCACAGTACAAAGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSQASKMYVPQAELLTKEGKYGP*HSTKCR Trigger: CCTGCACTTTGTACTGTGGCAGGGACCATATTTTCC...TTCTTTTGTAAGGAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | ACAACTCCAGTCAAGGATAACCTTGAACTTCTGCTCCTCTTCCTGCTTCTACCTACAGGAATCATAGATTaGCAAAAAGGTGGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TTPVKDNLELLLLFLLLPTGIID*QKGGPP Trigger: TGGAGGACCACCTTTTTGGCAATCTATGATTCCTGT...AGGTAGAAGCAGGAAGAGGAGCAGAAGTTCAAGGTTATCCTTGACTGGAGTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068301.11 |
||
| CDS-3UTR CCA 90 bp | AACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTGCCCACAGGGGACTCTaGGTGAGAATCTCCACATCG | + |
|
Preference number: 4 (lower is better) Translates to: NNIQTGNLPSKFKVLITAAHRGL*VRISTS Trigger: CGATGTGGAGATTCTCACCCAGAGTCCCCTGTGGGC...AGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CCA 90 bp | ATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCTTGTACAGGAAAATATaGTCCCTGCCACAGTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ITALTSQASKMYVPQAELLYRKI*SLPQYK Trigger: TTTGTACTGTGGCAGGGACCATATTTTCCTGTACAA...GAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTCAGAGATTATCTTTATATCCTGACCCCTCCGATTTTCTGTGTCTTATATGACCGTCCAGCACTCTaGTACCTGTGTTCTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVRDYLYILTPPIFCVLYDRPAL*YLCSSS Trigger: GCTAGAAGAACACAGGTATCAGAGTGCTGGACGGTC...ATATAAGACACAGAAAATCGGAGGGGTCAGGATATAAAGATAATCTCTGACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068301.11 |
||
| CDS-3UTR GCA 90 bp | AGTAAGATGTATGTGCCACAAGCTGAGCTCCTTACAAAAGAACATCTGAGAAGACATTCCCAGTATCCTTaGATTAAGGGCTCGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKMYVPQAELLTKEHLRRHSQYP*IKGSRR Trigger: CCTTCTCGAGCCCTTAATGCAAGGATACTGGGAATG...TCTTCTCAGATGTTCTTTTGTAAGGAGCTCAGCTTGTGGCACATACATCTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | ACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCCTTACAAAAGAAGTCCAGAAACAGAAGTaGTGGACCTATGAATGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSQASKMYVPQAELLTKEVQKQK*WTYECC Trigger: ACAGCATTCATAGGTCCAGCACTTCTGTTTCTGGAC...TTCTTTTGTAAGGAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | GTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTGACAACATATTCAGTTGGTCCTCCAATCACTaGCAGCAAATGCATGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: VVSLHAFWSQTLFDNIFSWSSNH*QQMHDY Trigger: ATAATCATGCATTTGCTGGCAGTGATTGGAGGACCA...ACTGAATATGTTGTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTCGAATTCCTTCTTGCAGGAACCATGAGCTTAGTAGAACCCAGACACATCCACTTGTTCCTGCTATaGTTGACCCATTTTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: MFEFLLAGTMSLVEPRHIHLFLL*LTHFCQ Trigger: TTGGCAAAAATGGGTCAACCATAGCAGGAACAAGTG...GATGTGTCTGGGTTCTACTAAGCTCATGGTTCCTGCAAGAAGGAATTCGAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR TCA 90 bp | GATATTCTGAATAATCACAAACACTCGGTAGTTTCCCTGCATGCTTTCTGGAGCGTGCACAATAGAACATaGATGTCCCAGCAAAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: DILNNHKHSVVSLHAFWSVHNRT*MSQQNN Trigger: GTTGTTTTGCTGGGACATTCATGTTCTATTGTGCAC...GCTCCAGAAAGCATGCAGGGAAACTACCGAGTGTTTGTGATTATTCAGAATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR TCA 90 bp | AGTAAGATGTATGTGCCACAAGCTGAGCTCCTTACAAAAGAACATCTGAGAAGATGCCAACACCACCTGTaGAGATTACACGGAAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKMYVPQAELLTKEHLRRCQHHL*RLHGSN Trigger: ATTACTTCCGTGTAATCTTCACAGGTGGTGTTGGCA...TCTTCTCAGATGTTCTTTTGTAAGGAGCTCAGCTTGTGGCACATACATCTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTCGAATTCCTTCTTGCAGGAACCATGAGCTTAGTAGAACCCAGACACATCTCACTTTTCGTCATGTaGGCAACCACAAGCTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: MFEFLLAGTMSLVEPRHISLFVM*ATTSLL Trigger: TAATAAGCTTGTGGTTGCTCACATGACGAAAAGTGA...GATGTGTCTGGGTTCTACTAAGCTCATGGTTCCTGCAAGAAGGAATTCGAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | AACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTCCTGTAGTACTCATATaGCCAAAGCCCACAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NNIQTGNLPSKFKVLITAPVVLI*PKPTGD Trigger: GTCCCCTGTGGGCTTTGGGCATATGAGTACTACAGG...AGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | AAACCCTGTTTGACAACATATTCAGTTTATAGGATGGGGCCTGAAATTCCCATTCATTCCCAGTATCCTTaGATTAAGGGCTCGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPCLTTYSVYRMGPEIPIHSQYP*IKGSRR Trigger: CCTTCTCGAGCCCTTAATGCAAGGATACTGGGAATG...AATGGGAATTTCAGGCCCCATCCTATAAACTGAATATGTTGTCAAACAGGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTGGGGATGTGCTCCTATGATAGTGATATTCTGAATAATCACAAACACTCGTGCTGGACCTATGAATaGTGTGTCATGCAAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PVGMCSYDSDILNNHKHSCWTYE*CVMQMH Trigger: ATGCATTTGCATGACACAGCATTCATAGGTCCAGCA...CGAGTGTTTGTGATTATTCAGAATATCACTATCATAGGAGCACATCCCCACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CCA 90 bp | AGTAAGATGTATGTGCCACAAGCTGAGCTCCTTACAAAAGAACATCTGAGAAGATCTAGCCGTTTTAACTaGTGTCTTGACAGTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKMYVPQAELLTKEHLRRSSRFN*CLDSGG Trigger: ACCACCACTGTCAAGACACCAGTTAAAACGGCTAGA...TCTTCTCAGATGTTCTTTTGTAAGGAGCTCAGCTTGTGGCACATACATCTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCCTTACAAAAGAACACTTGTTCCTGCTATaGTTGACCCATTTTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSQASKMYVPQAELLTKEHLFLL*LTHFCQ Trigger: TTGGCAAAAATGGGTCAACCATAGCAGGAACAAGTG...TTCTTTTGTAAGGAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTGGGGATGTGCTCCTATGATAGTGATATTCTGAATAATCACAAACACTCGCACTTGTTCCTGCTATaGTTGACCCATTTTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PVGMCSYDSDILNNHKHSHLFLL*LTHFCQ Trigger: TTGGCAAAAATGGGTCAACCATAGCAGGAACAAGTG...CGAGTGTTTGTGATTATTCAGAATATCACTATCATAGGAGCACATCCCCACTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR TCA 90 bp | AACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTCCAGAGACTGGTAAATaGAAAGGCCACAAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NNIQTGNLPSKFKVLITAPETGK*KGHKHR Trigger: CCTGTGCTTGTGGCCTTTTCATTTACCAGTCTCTGG...AGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR TCA 90 bp | GTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTGACAACATATTCAGTTCTGATTGCAAACACTaGCACAGTAACGAATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VVSLHAFWSQTLFDNIFSSDCKH*HSNESN Trigger: ATTTGATTCGTTACTGTGTCAGTGTTTGCAATCAGA...ACTGAATATGTTGTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCTTATATAGCCCAGACTAGCCTACAACTCCAGTCAAGGATAACCTTGAACTATATGCAGGTGAGATaGAATCTGATTGCAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: VSYIAQTSLQLQSRITLNYMQVR*NLIANT Trigger: AGTGTTTGCAATCAGATTGCATCTCACCTGCATATA...GTTCAAGGTTATCCTTGACTGGAGTTGTAGGCTAGTCTGGGCTATATAAGACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068301.11 |
||
| CDS-3UTR GCA 90 bp | ATGTTCGAATTCCTTCTTGCAGGAACCATGAGCTTAGTAGAACCCAGACACATCTATATGCAGGTGAGATaGAATCTGATTGCAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: MFEFLLAGTMSLVEPRHIYMQVR*NLIANT Trigger: AGTGTTTGCAATCAGATTGCATCTCACCTGCATATA...GATGTGTCTGGGTTCTACTAAGCTCATGGTTCCTGCAAGAAGGAATTCGAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCCTTACAAAAGAATTGTACAGGAAAATATaGTCCCTGCCACAGTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TSQASKMYVPQAELLTKELYRKI*SLPQYK Trigger: TTTGTACTGTGGCAGGGACCATATTTTCCTGTACAA...TTCTTTTGTAAGGAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTCGAATTCCTTCTTGCAGGAACCATGAGCTTAGTAGAACCCAGACACATCAAGCTGTTAAAATACTaGTCCAGAAACAGAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MFEFLLAGTMSLVEPRHIKLLKY*SRNRSA Trigger: AGCACTTCTGTTTCTGGACCAGTATTTTAACAGCTT...GATGTGTCTGGGTTCTACTAAGCTCATGGTTCCTGCAAGAAGGAATTCGAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTCAGAGATTATCTTTATATCCTGACCCCTCCGATTTTCTGTGTCTTATATAGATTGCCAAAAAGGTaGTCCTCCAATCACTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVRDYLYILTPPIFCVLYRLPKR*SSNHCQ Trigger: CTGGCAGTGATTGGAGGACCACCTTTTTGGCAATCT...ATATAAGACACAGAAAATCGGAGGGGTCAGGATATAAAGATAATCTCTGACAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068301.11 |
||
| CDS-3UTR TCA 90 bp | AACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTTGTTCCTGCTATGGTTaGCCCATTTTTGCCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: NNIQTGNLPSKFKVLITACSCYG*PIFANT Trigger: GGTGTTGGCAAAAATGGGTCAACCATAGCAGGAACA...AGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR TCA 90 bp | AATTTAAGGTCCTTATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCTCACTTTTCGTCATGTaGGCAACCACAAGCTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: NLRSLSLLSPHKLVRCMCSLFVM*ATTSLL Trigger: TAATAAGCTTGTGGTTGCTCACATGACGAAAAGTGA...GCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGATAAGGACCTTAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR TCA 90 bp | ATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTCTCAGAAGTGCTGGACCTATaGATGCTGTGTCATGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: IYRQETFHLNLRSLSLLSEVLDL*MLCHAN Trigger: ATTTGCATGACACAGCATTCATAGGTCCAGCACTTC...TGAGAGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTCAGAGATTATCTTTATATCCTGACCCCTCCGATTTTCTGTGTCTTATATGAAGTGCTGGACCTATaGATGCTGTGTCATGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVRDYLYILTPPIFCVLYEVLDL*MLCHAN Trigger: ATTTGCATGACACAGCATTCATAGGTCCAGCACTTC...ATATAAGACACAGAAAATCGGAGGGGTCAGGATATAAAGATAATCTCTGACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068301.11 |
||
| CDS-3UTR GCA 90 bp | AGTAAGATGTATGTGCCACAAGCTGAGCTCCTTACAAAAGAACATCTGAGAAGATGTCCCAAGTTGTACTaGAATACAAGTTCCAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKMYVPQAELLTKEHLRRCPKLY*NTSSKN Trigger: GTTCTTGGAACTTGTATTGCAGTACAACTTGGGACA...TCTTCTCAGATGTTCTTTTGTAAGGAGCTCAGCTTGTGGCACATACATCTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | AAACCCTGTTTGACAACATATTCAGTTTATAGGATGGGGCCTGAAATTCCCATTACAGGAATCATAGATTaGCAAAAAGGTGGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPCLTTYSVYRMGPEIPITGIID*QKGGPP Trigger: TGGAGGACCACCTTTTTGGCAATCTATGATTCCTGT...AATGGGAATTTCAGGCCCCATCCTATAAACTGAATATGTTGTCAAACAGGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CCA 90 bp | AACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTAGATTGCCAAAAAGGTaGTCCTCCAATCACTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NNIQTGNLPSKFKVLITARLPKR*SSNHCQ Trigger: CTGGCAGTGATTGGAGGACCACCTTTTTGGCAATCT...AGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR TCA 90 bp | AATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTCTCGTGCACAATAGAACATaGATGTCCCAGCAAAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: NIQTGNLPSKFKVLITALVHNRT*MSQQNN Trigger: GTTGTTTTGCTGGGACATTCATGTTCTATTGTGCAC...GAGAGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR TCA 90 bp | CTCAACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGAAGTGCTGGACCTATaGATGCTGTGTCATGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LNNIQTGNLPSKFKVLITEVLDL*MLCHAN Trigger: ATTTGCATGACACAGCATTCATAGGTCCAGCACTTC...AGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | TATTTGTTCTTATCCACCCCTGTTGTCCTTAATATGTTCGAATTCCTTCTTGCATGGTCCTCCAATCACTaGCAGCAAATGCATGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: YLFLSTPVVLNMFEFLLAWSSNH*QQMHDY Trigger: ATAATCATGCATTTGCTGGCAGTGATTGGAGGACCA...TGCAAGAAGGAATTCGAACATATTAAGGACAACAGGGGTGGATAAGAACAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | TATTTGTTCTTATCCACCCCTGTTGTCCTTAATATGTTCGAATTCCTTCTTGCATGCCACAGTACAAAGTaGAGGAAGAAGTTTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLFLSTPVVLNMFEFLLACHSTK*RKKFHL Trigger: CAAATGAAACTTCTTCCTGCACTTTGTACTGTGGCA...TGCAAGAAGGAATTCGAACATATTAAGGACAACAGGGGTGGATAAGAACAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | AACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTTGCTGGACCTATGAATaGTGTGTCATGCAAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NNIQTGNLPSKFKVLITACWTYE*CVMQMH Trigger: ATGCATTTGCATGACACAGCATTCATAGGTCCAGCA...AGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CCA 90 bp | ATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTCTCATTGTACAGGAAAATATaGTCCCTGCCACAGTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: IYRQETFHLNLRSLSLLSLYRKI*SLPQYK Trigger: TTTGTACTGTGGCAGGGACCATATTTTCCTGTACAA...TGAGAGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR TCA 90 bp | AATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTCTCTCTGATTGCAAACACTaGCACAGTAACGAATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NIQTGNLPSKFKVLITALSDCKH*HSNESN Trigger: ATTTGATTCGTTACTGTGTCAGTGTTTGCAATCAGA...GAGAGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | CTCAACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTTGTCCCAAGTTGTACTaGAATACAAGTTCCAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LNNIQTGNLPSKFKVLITCPKLY*NTSSKN Trigger: GTTCTTGGAACTTGTATTGCAGTACAACTTGGGACA...AGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTTGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | CTCAACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTTGCCACAGTACAAAGTaGAGGAAGAAGTTTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNNIQTGNLPSKFKVLITCHSTK*RKKFHL Trigger: CAAATGAAACTTCTTCCTGCACTTTGTACTGTGGCA...AGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTTGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR GCA 90 bp | TATTTGTTCTTATCCACCCCTGTTGTCCTTAATATGTTCGAATTCCTTCTTGCATATATGCAGGTGAGATaGAATCTGATTGCAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: YLFLSTPVVLNMFEFLLAYMQVR*NLIANT Trigger: AGTGTTTGCAATCAGATTGCATCTCACCTGCATATA...TGCAAGAAGGAATTCGAACATATTAAGGACAACAGGGGTGGATAAGAACAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CCA 90 bp | ATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTCTCAAAGCTGTTAAAATACTaGTCCAGAAACAGAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IYRQETFHLNLRSLSLLSKLLKY*SRNRSA Trigger: AGCACTTCTGTTTCTGGACCAGTATTTTAACAGCTT...TGAGAGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR TCA 90 bp | CTCAACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTTCTGATTGCAAACACTaGCACAGTAACGAATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LNNIQTGNLPSKFKVLITSDCKH*HSNESN Trigger: ATTTGATTCGTTACTGTGTCAGTGTTTGCAATCAGA...AGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTTGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CCA 90 bp | AACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTAAGCTGTTAAAATACTaGTCCAGAAACAGAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NNIQTGNLPSKFKVLITAKLLKY*SRNRSA Trigger: AGCACTTCTGTTTCTGGACCAGTATTTTAACAGCTT...AGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CCA 90 bp | CTCAACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGTTCCTGAGAGAAGCTaGAATAATATAATTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LNNIQTGNLPSKFKVLITVPERS*NNIIRI Trigger: GATCCTAATTATATTATTCCAGCTTCTCTCAGGAAC...AGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTTGAG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039153.14 |
||
| CDS-3UTR CAA 90 bp | CACAAACACTCGGTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTGACCTCCACATCGTTTCCTaGTTGACCGATGCCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: HKHSVVSLHAFWSQTLFDLHIVS*LTDAHS Trigger: TGAGTGGGCATCGGTCAACAAGGAAACGATGTGGAG...GTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTACCGAGTGTTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS TCA 90 bp | CAGTATCCTTGCATTAAGGGCTCGAGAAGGGACCGTCCAGCACTCTaGTACCTGTGTTCTTCTAGCCGTTTTAACTGGTGTCTTGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: QYPCIKGSRRDRPAL*YLCSSSRFNWCLDS Trigger: ACTGTCAAGACACCAGTTAAAACGGCTAGAAGAACACAGGTATCAGAGTGCTGGACGGTCCCTTCTCGAGCCCTTAATGCAAGGATACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 ENSMUST00000148269.2 ENSMUST00000192438.6 |
||
| CDS-3UTR CAA 90 bp | GTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTGACAACATATTCAGTCTCCACATCGTTTCCTaGTTGACCGATGCCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: VVSLHAFWSQTLFDNIFSLHIVS*LTDAHS Trigger: TGAGTGGGCATCGGTCAACAAGGAAACGATGTGGAG...ACTGAATATGTTGTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CAA 90 bp | ATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCAAGGAGAAAGGACACTaGTTCCTGCTATGGTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: ITALTSQASKMYVPQAELKEKGH*FLLWLT Trigger: GGTCAACCATAGCAGGAACAAGTGTCCTTTCTCCTT...GAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CAA 90 bp | CACAAACACTCGGTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTGACTCCAGAAACATATGTTaGCCAGTGTGCACAATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HKHSVVSLHAFWSQTLFDSRNIC*PVCTIE Trigger: TTCTATTGTGCACACTGGCAAACATATGTTTCTGGA...GTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTACCGAGTGTTTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CAA 90 bp | GTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTGACAACATATTCAGTTTGTTCCTGCTATGGTaGACCCATTTTTGCCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: VVSLHAFWSQTLFDNIFSLFLLW*THFCQH Trigger: GTGTTGGCAAAAATGGGTCAACCATAGCAGGAACAA...ACTGAATATGTTGTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTCTCCTGCCTTGTCAGAGATTATCTTTATATCCTGACCCCTCCGATTTTCAAGGAGAAAGGACACTaGTTCCTGCTATGGTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SFSCLVRDYLYILTPPIFKEKGH*FLLWLT Trigger: GGTCAACCATAGCAGGAACAAGTGTCCTTTCTCCTT...GAAAATCGGAGGGGTCAGGATATAAAGATAATCTCTGACAAGGCAGGAGAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068301.11 |
||
| CDS-3UTR CAA 90 bp | CCAGTGGGGATGTGCTCCTATGATAGTGATATTCTGAATAATCACAAACACTCGCACAGGAATCATAGATaGCCAAAAAGGTGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PVGMCSYDSDILNNHKHSHRNHR*PKRWSS Trigger: GGAGGACCACCTTTTTGGCAATCTATGATTCCTGTG...CGAGTGTTTGTGATTATTCAGAATATCACTATCATAGGAGCACATCCCCACTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS CCA 90 bp | GGCCCCACGGTTCCTGAGAGAAGCTGGAATAATATAATTAGGATCTaGGACTCTGTAACATCGAATATTCCAAATCGCAATGTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GPTVPERSWNNIIRI*DSVTSNIPNRNVPE Trigger: TTCTGGAACATTGCGATTTGGAATATTCGATGTTACAGAGTCCCAGATCCTAATTATATTATTCCAGCTTCTCTCAGGAACCGTGGGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039153.14 |
||
| CDS CCA 90 bp | ATCGTGAAGTTCCAGAACCAAGGCCCCACGGTTCCTGAGAGAAGCTaGAATAATATAATTAGGATCTGGGACTCTGTAACATCGAATATT | + |
|
Preference number: 5 (lower is better) Translates to: IVKFQNQGPTVPERS*NNIIRIWDSVTSNI Trigger: AATATTCGATGTTACAGAGTCCCAGATCCTAATTATATTATTCCAGCTTCTCTCAGGAACCGTGGGGCCTTGGTTCTGGAACTTCACGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039153.14 |
||
| CDS-3UTR CAA 90 bp | TATTTGTTCTTATCCACCCCTGTTGTCCTTAATATGTTCGAATTCCTTCTTGCACTCCACATCGTTTCCTaGTTGACCGATGCCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: YLFLSTPVVLNMFEFLLALHIVS*LTDAHS Trigger: TGAGTGGGCATCGGTCAACAAGGAAACGATGTGGAG...TGCAAGAAGGAATTCGAACATATTAAGGACAACAGGGGTGGATAAGAACAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CAA 90 bp | GTAGTTTCCCTGCATGCTTTCTGGAGCCAAACCCTGTTTGACAACATATTCAGTAGGATTTGTCCCAAGTaGTACTGCAATACAAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVSLHAFWSQTLFDNIFSRICPK*YCNTSS Trigger: GGAACTTGTATTGCAGTACAACTTGGGACAAATCCT...ACTGAATATGTTGTCAAACAGGGTTTGGCTCCAGAAAGCATGCAGGGAAACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTATCACTGCTCTCACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGTCCAGAAACATATGTTaGCCAGTGTGCACAATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLSLLSPHKLVRCMCHKLSRNIC*PVCTIE Trigger: TTCTATTGTGCACACTGGCAAACATATGTTTCTGGA...CAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGATAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS TCA 90 bp | TCTAGCCGTTTTAACTGGTGTCTTGACAGTGGTGGTGTCGGTAACTaGAACAATTTATTTAATACACACCCTGTAGTACTCATATGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSRFNWCLDSGGVGN*NNLFNTHPVVLICP Trigger: TGGGCATATGAGTACTACAGGGTGTGTATTAAATAAATTGTTTCAGTTACCGACACCACCACTGTCAAGACACCAGTTAAAACGGCTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 ENSMUST00000141525.2 ENSMUST00000148269.2 ENSMUST00000192438.6 |
||
| CDS GCA 90 bp | ATCATAGATTGCCAAAAAGGTGGTCCTCCAATCACTGCCAGCAAATaGATGATTATTATGAAGATTTGCACTGTCGATAGTGAGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: IIDCQKGGPPITASK*MIIMKICTVDSESQ Trigger: CTGTGACTCACTATCGACAGTGCAAATCTTCATAATAATCATGCATTTGCTGGCAGTGATTGGAGGACCACCTTTTTGGCAATCTATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192438.6 |
||
| CDS-3UTR CAA 90 bp | ACCTCACAAGCTAGTAAGATGTATGTGCCACAAGCTGAGCTCCTTACAAAAGAATCCAGAAACATATGTTaGCCAGTGTGCACAATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSQASKMYVPQAELLTKESRNIC*PVCTIE Trigger: TTCTATTGTGCACACTGGCAAACATATGTTTCTGGA...TTCTTTTGTAAGGAGCTCAGCTTGTGGCACATACATCTTACTAGCTTGTGAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CAA 90 bp | TATTTGTTCTTATCCACCCCTGTTGTCCTTAATATGTTCGAATTCCTTCTTGCAATGGTTGACCCATTTTaGCCAACACCACCTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YLFLSTPVVLNMFEFLLAMVDPF*PTPPVK Trigger: CTTCACAGGTGGTGTTGGCAAAAATGGGTCAACCAT...TGCAAGAAGGAATTCGAACATATTAAGGACAACAGGGGTGGATAAGAACAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CAA 90 bp | ATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTCTCAATGGTTGACCCATTTTaGCCAACACCACCTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IYRQETFHLNLRSLSLLSMVDPF*PTPPVK Trigger: CTTCACAGGTGGTGTTGGCAAAAATGGGTCAACCAT...TGAGAGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CAA 90 bp | AAACCCTGTTTGACAACATATTCAGTTTATAGGATGGGGCCTGAAATTCCCATTTTGTTCCTGCTATGGTaGACCCATTTTTGCCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: KPCLTTYSVYRMGPEIPILFLLW*THFCQH Trigger: GTGTTGGCAAAAATGGGTCAACCATAGCAGGAACAA...AATGGGAATTTCAGGCCCCATCCTATAAACTGAATATGTTGTCAAACAGGGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CAA 90 bp | AATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTCTCCACAGGAATCATAGATaGCCAAAAAGGTGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NIQTGNLPSKFKVLITALHRNHR*PKRWSS Trigger: GGAGGACCACCTTTTTGGCAATCTATGATTCCTGTG...GAGAGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CAA 90 bp | CTCAACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTATGGTTGACCCATTTTaGCCAACACCACCTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LNNIQTGNLPSKFKVLITMVDPF*PTPPVK Trigger: CTTCACAGGTGGTGTTGGCAAAAATGGGTCAACCAT...AGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CAA 90 bp | ATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTCTCATTGTTCCTGCTATGGTaGACCCATTTTTGCCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: IYRQETFHLNLRSLSLLSLFLLW*THFCQH Trigger: GTGTTGGCAAAAATGGGTCAACCATAGCAGGAACAA...TGAGAGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CAA 90 bp | CTCAACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTAAGGAGAAAGGACACTaGTTCCTGCTATGGTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LNNIQTGNLPSKFKVLITKEKGH*FLLWLT Trigger: GGTCAACCATAGCAGGAACAAGTGTCCTTTCTCCTT...AGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS GCA 90 bp | GGTCCTCCAATCACTGCCAGCAAATGCATGATTATTATGAAGATTTaGACTTCAGTCACATCAATTATTCCAAATCGCAATGTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GPPITASKCMIIMKI*TSVTSIIPNRNVPE Trigger: TTCTGGAACATTGCGATTTGGAATAATTGATGTGACTGAAGTGCAAATCTTCATAATAATCATGCATTTGCTGGCAGTGATTGGAGGACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS GCA 90 bp | GAAGTAATTTGTACAGGAAAATATGGTCCCTGCCACAGTACAAAGTaGAGGAAGAAGTTTCATTTGAATATTCAACACAGGAATCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EVICTGKYGPCHSTK*RKKFHLNIQHRNRE Trigger: TTCACGATTCCTGTGTTGAATATTCAAATGAAACTTCTTCCTGCACTTTGTACTGTGGCAGGGACCATATTTTCCTGTACAAATTACTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039153.14 |
||
| CDS GCA 90 bp | AGCTGTAGAGGCTTTAATTCTGAAGACATGTATATGCAGGTGAGATaGAATCTGATTGCAAACACTGACACAGTAACGAATCAAATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SCRGFNSEDMYMQVR*NLIANTDTVTNQIK Trigger: TTTGATTTGATTCGTTACTGTGTCAGTGTTTGCAATCAGATTGCATCTCACCTGCATATACATGTCTTCAGAATTAAAGCCTCTACAGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS-3UTR CAA 90 bp | AACAATATACAGACAGGAAACCTTCCATCTAAATTTAAGGTCCTTATCACTGCTAGGATTTGTCCCAAGTaGTACTGCAATACAAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NNIQTGNLPSKFKVLITARICPK*YCNTSS Trigger: GGAACTTGTATTGCAGTACAACTTGGGACAAATCCT...AGCAGTGATAAGGACCTTAAATTTAGATGGAAGGTTTCCTGTCTGTATATTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS GCA 90 bp | ATCATAGATTGCCAAAAAGGTGGTCCTCCAATCACTGCCAGCAAATaGATGATTATTATGAAGATTTGCACTTCAGTCACATCAATTATT | + |
|
Preference number: 5 (lower is better) Translates to: IIDCQKGGPPITASK*MIIMKICTSVTSII Trigger: AATAATTGATGTGACTGAAGTGCAAATCTTCATAATAATCATGCATTTGCTGGCAGTGATTGGAGGACCACCTTTTTGGCAATCTATGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068301.11 ENSMUST00000121231.8 |
||
| CDS GCA 90 bp | GAAGTAATTTGTACAGGAAAATATGGTCCCTGCCACAGTACAAAGTaGAGGAAGAAGTTTCATTTGAATATTCAACACAGGAATCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: EVICTGKYGPCHSTK*RKKFHLNIQHRNHR Trigger: TCTATGATTCCTGTGTTGAATATTCAAATGAAACTTCTTCCTGCACTTTGTACTGTGGCAGGGACCATATTTTCCTGTACAAATTACTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068301.11 ENSMUST00000121231.8 ENSMUST00000192438.6 |
||
| CDS GCA 72 bp | GAGGGTACTCTTCCAACTAGCCATTCCCAGTATCCTTaGATTAAGGGCTCGAGAAGGGACCGTCCAGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: EGTLPTSHSQYP*IKGSRRDRPAL Trigger: GAGTGCTGGACGGTCCCTTCTCGAGCCCTTAATGCAAGGATACTGGGAATGGCTAGTTGGAAGAGTACCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 ENSMUST00000148269.2 ENSMUST00000192438.6 |
||
| CDS TCA 72 bp | GTACTCATATGCCCAAAGCCCACAGGGGACTCTGGGTaGGAATCTCCACATCGTTTCCTTGTTGACCGATGC | + |
|
Preference number: 6 (lower is better) Translates to: VLICPKPTGDSG*ESPHRFLVDRC Trigger: GCATCGGTCAACAAGGAAACGATGTGGAGATTCTCACCCAGAGTCCCCTGTGGGCTTTGGGCATATGAGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 ENSMUST00000137530.2 ENSMUST00000141525.2 ENSMUST00000148269.2 ENSMUST00000192438.6 |
||
| CDS TCA 72 bp | TGCATTAAGGGCTCGAGAAGGGACCGTCCAGCACTCTaGTACCTGTGTTCTTCTAGCCGTTTTAACTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CIKGSRRDRPAL*YLCSSSRFNWC Trigger: ACACCAGTTAAAACGGCTAGAAGAACACAGGTATCAGAGTGCTGGACGGTCCCTTCTCGAGCCCTTAATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 ENSMUST00000148269.2 ENSMUST00000192438.6 |
||
| CDS CCA 72 bp | TTCCAGAACCAAGGCCCCACGGTTCCTGAGAGAAGCTaGAATAATATAATTAGGATCTGGGACTCTGTAACA | + |
|
Preference number: 6 (lower is better) Translates to: FQNQGPTVPERS*NNIIRIWDSVT Trigger: TGTTACAGAGTCCCAGATCCTAATTATATTATTCCAGCTTCTCTCAGGAACCGTGGGGCCTTGGTTCTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039153.14 |
||
| CDS CAA 72 bp | GATACCTGTGTTCTTCTAGCCGTTTTAACTGGTGTCTaGACAGTGGTGGTGTCGGTAACTGAAACAATTTAT | + |
|
Preference number: 6 (lower is better) Translates to: DTCVLLAVLTGV*TVVVSVTETIY Trigger: ATAAATTGTTTCAGTTACCGACACCACCACTGTCAAGACACCAGTTAAAACGGCTAGAAGAACACAGGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 ENSMUST00000141525.2 ENSMUST00000148269.2 ENSMUST00000192438.6 |
||
| CDS CAA 90 bp | CAGCACTCTGATACCTGTGTTCTTCTAGCCGTTTTAACTGGTGTCTaGACAGTGGTGGTGTCGGTAACTGAAACAATTTATTTAATACAC | + |
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Preference number: 6 (lower is better) Translates to: QHSDTCVLLAVLTGV*TVVVSVTETIYLIH Trigger: GTGTATTAAATAAATTGTTTCAGTTACCGACACCACCACTGTCAAGACACCAGTTAAAACGGCTAGAAGAACACAGGTATCAGAGTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 ENSMUST00000141525.2 ENSMUST00000148269.2 ENSMUST00000192438.6 |
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| CDS GCA 72 bp | AATGAAGCTGTTAAAATACTGGTCCAGAAACAGAAGTaGTGGACCTATGAATGCTGTGTCATGCAAATGCAT | + |
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Preference number: 6 (lower is better) Translates to: NEAVKILVQKQK*WTYECCVMQMH Trigger: ATGCATTTGCATGACACAGCATTCATAGGTCCAGCACTTCTGTTTCTGGACCAGTATTTTAACAGCTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS CAA 72 bp | GAATATTCCAAATCGCAATGTTCCAGAAACATATGTTaGCCAGTGTGCACAATAGAACATGAATGTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: EYSKSQCSRNIC*PVCTIEHECPS Trigger: GCTGGGACATTCATGTTCTATTGTGCACACTGGCAAACATATGTTTCTGGAACATTGCGATTTGGAATATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039153.14 |
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| CDS CAA 90 bp | TGGTCCTCCAATCACTGCCAGCAAATGCATGATTATTATGAAGATTaGCACTTCAGTCACATCAATTATTCCAAATCGCAATGTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: WSSNHCQQMHDYYED*HFSHINYSKSQCSR Trigger: TCTGGAACATTGCGATTTGGAATAATTGATGTGACTGAAGTGCAAATCTTCATAATAATCATGCATTTGCTGGCAGTGATTGGAGGACCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS TCA 72 bp | TTTAACTGGTGTCTTGACAGTGGTGGTGTCGGTAACTaGAACAATTTATTTAATACACACCCTGTAGTACTC | + |
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Preference number: 6 (lower is better) Translates to: FNWCLDSGGVGN*NNLFNTHPVVL Trigger: GAGTACTACAGGGTGTGTATTAAATAAATTGTTTCAGTTACCGACACCACCACTGTCAAGACACCAGTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000039153.14 ENSMUST00000068301.11 ENSMUST00000121231.8 ENSMUST00000141525.2 ENSMUST00000148269.2 ENSMUST00000192438.6 |
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| CDS CCA 72 bp | AATATTCAACACAGGAATCATAGATTGCCAAAAAGGTaGTCCTCCAATCACTGCCAGCAAATGCATGATTAT | + |
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Preference number: 6 (lower is better) Translates to: NIQHRNHRLPKR*SSNHCQQMHDY Trigger: ATAATCATGCATTTGCTGGCAGTGATTGGAGGACCACCTTTTTGGCAATCTATGATTCCTGTGTTGAATATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068301.11 ENSMUST00000121231.8 ENSMUST00000192438.6 |
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| CDS CAA 72 bp | AATTATTCCAAATCGCAATGTTCCAGAAACATATGTTaGCCAGTGTGCACAATAGAACATGAATGTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: NYSKSQCSRNIC*PVCTIEHECPS Trigger: GCTGGGACATTCATGTTCTATTGTGCACACTGGCAAACATATGTTTCTGGAACATTGCGATTTGGAATAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068301.11 ENSMUST00000121231.8 |
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| CDS CAA 90 bp | TGTAACATCGAATATTCCAAATCGCAATGTTCCAGAAACATATGTTaGCCAGTGTGCACAATAGAACATGAATGTCCCAGCAAAACAACA | + |
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Preference number: 6 (lower is better) Translates to: CNIEYSKSQCSRNIC*PVCTIEHECPSKTT Trigger: TGTTGTTTTGCTGGGACATTCATGTTCTATTGTGCACACTGGCAAACATATGTTTCTGGAACATTGCGATTTGGAATATTCGATGTTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039153.14 |
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| CDS CAA 90 bp | AGTCACATCAATTATTCCAAATCGCAATGTTCCAGAAACATATGTTaGCCAGTGTGCACAATAGAACATGAATGTCCCAGCAAAACAACA | + |
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Preference number: 6 (lower is better) Translates to: SHINYSKSQCSRNIC*PVCTIEHECPSKTT Trigger: TGTTGTTTTGCTGGGACATTCATGTTCTATTGTGCACACTGGCAAACATATGTTTCTGGAACATTGCGATTTGGAATAATTGATGTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068301.11 ENSMUST00000121231.8 |
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