Pregenerated sensors for CEP95 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018372Ensembl transcript IDs: ENSMUST00000018516.11, ENSMUST00000103068.10, ENSMUST00000124898.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGGCAGCTGAGACTTCCCATCGTTGTTGGGGGCCATGAGGTGGTGGGACTTCTGGGTCTGTCTGCGGTCTaGAGGGCAGCACTGTGGCCG | + |
|
Preference number: 2 (lower is better) Translates to: WQLRLPIVVGGHEVVGLLGLSAV*RAALWP Trigger: CGGCCACAGTGCTGCCCTCCAGACCGCAGACAGACC...CAGAAGTCCCACCACCTCATGGCCCCCAACAACGATGGGAAGTCTCAGCTGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124898.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGGAGGGCAGCACTGTGGCCGGCAGATGGCCTAACCTTTGCCAGCATGCCTTGCAGATAGGGAAGACATaGATGTGGGTTCTTTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LEGSTVAGRWPNLCQHALQIGKT*MWVLSS Trigger: TGAAGAAAGAACCCACATGCATGTCTTCCCTATCTG...CAAGGCATGCTGGCAAAGGTTAGGCCATCTGCCGGCCACAGTGCTGCCCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124898.2 |
||
| 3UTR-3UTR TCA 90 bp | AAATCTACAATCAGGTCTGTCTGCGGTCTGGAGGGCAGCACTGTGGCCGGCAGAATAACGTGTGGTCTGTaGATCAGTACAGCAGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: KSTIRSVCGLEGSTVAGRITCGL*ISTAEA Trigger: AGCCTCTGCTGTACTGATTCACAGACCACACGTTAT...TCTGCCGGCCACAGTGCTGCCCTCCAGACCGCAGACAGACCTGATTGTAGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124898.2 |
||
| 3UTR CCA 72 bp | GTCTGCGGTCTGGAGGGCAGCACTGTGGCCGGCAGATaGCCTAACCTTTGCCAGCATGCCTTGGTGTTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VCGLEGSTVAGR*PNLCQHALVLN Trigger: GTTTAACACCAAGGCATGCTGGCAAAGGTTAGGCCATCTGCCGGCCACAGTGCTGCCCTCCAGACCGCAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124898.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGTCTGTCTGCGGTCTGGAGGGCAGCACTGTGGCCGGCAGATGGCCTAACCGAGTCCAGCTCATTCTaGTGCTGTCTCTTTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SGLSAVWRAALWPADGLTESSSF*CCLFSS Trigger: CGAAGAAAAGAGACAGCACCAGAATGAGCTGGACTC...GGTTAGGCCATCTGCCGGCCACAGTGCTGCCCTCCAGACCGCAGACAGACCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124898.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGTCTGTCTGCGGTCTGGAGGGCAGCACTGTGGCCGGCAGATGGCCTAACCTCCAGCTCATTCTGGTaGTGTCTCTTTTCTTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGLSAVWRAALWPADGLTSSSFW*CLFSSL Trigger: CAACGAAGAAAAGAGACAGCACCAGAATGAGCTGGA...GGTTAGGCCATCTGCCGGCCACAGTGCTGCCCTCCAGACCGCAGACAGACCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124898.2 |
||
| CDS-3UTR GCA 90 bp | AAATCTACAATCAGGTCTGTCTGCGGTCTGGAGGGCAGCACTGTGGCCGGCAGATGGAAGGAAGCCAACTaGAGCCGAGCTTTGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KSTIRSVCGLEGSTVAGRWKEAN*SRALKR Trigger: GCGCTTCAAAGCTCGGCTGCAGTTGGCTTCCTTCCA...TCTGCCGGCCACAGTGCTGCCCTCCAGACCGCAGACAGACCTGATTGTAGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124898.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTGTCTGCGGTCTGGAGGGCAGCACTGTGGCCGGCAGATGGCCTAACCTTTGACGTTCCTGTGAGATaGCTTCTGCTAGCAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLSAVWRAALWPADGLTFDVPVR*LLLAMK Trigger: TTTCATTGCTAGCAGAAGCCATCTCACAGGAACGTC...AAAGGTTAGGCCATCTGCCGGCCACAGTGCTGCCCTCCAGACCGCAGACAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124898.2 |
||
| CDS-3UTR CCA 90 bp | TGGCAGCTGAGACTTCCCATCGTTGTTGGGGGCCATGAGGTGGTGGGACTTCTGGGATTTTTACTGTACTaGAAGGAAGCCAACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WQLRLPIVVGGHEVVGLLGFLLY*KEANCS Trigger: GCTGCAGTTGGCTTCCTTCCAGTACAGTAAAAATCC...CAGAAGTCCCACCACCTCATGGCCCCCAACAACGATGGGAAGTCTCAGCTGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000124898.2 |
||
| CDS-3UTR TCA 90 bp | TGGCAGCTGAGACTTCCCATCGTTGTTGGGGGCCATGAGGTGGTGGGACTTCTGATTTCTGTCTCACTTTaGGTTCTTGACGTTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: WQLRLPIVVGGHEVVGLLISVSL*VLDVPV Trigger: CACAGGAACGTCAAGAACTCAAAGTGAGACAGAAAT...CAGAAGTCCCACCACCTCATGGCCCCCAACAACGATGGGAAGTCTCAGCTGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124898.2 |
||
| CDS-3UTR GCA 90 bp | TGGCAGCTGAGACTTCCCATCGTTGTTGGGGGCCATGAGGTGGTGGGACTTCTGGTCTCTTTTCTTCGTTaGGTTTCTCTTTGGCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: WQLRLPIVVGGHEVVGLLVSFLR*VSLWRS Trigger: ACTACGCCAAAGAGAAACGCAACGAAGAAAAGAGAC...CAGAAGTCCCACCACCTCATGGCCCCCAACAACGATGGGAAGTCTCAGCTGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124898.2 |
||
| CDS-3UTR CCA 90 bp | AAATCTACAATCAGGTCTGTCTGCGGTCTGGAGGGCAGCACTGTGGCCGGCAGACGTTGCGTTTCTCTTTaGCGTAGTTTCTTAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSTIRSVCGLEGSTVAGRRCVSL*RSFLGL Trigger: GAGACCTAAGAAACTACGCCAAAGAGAAACGCAACG...TCTGCCGGCCACAGTGCTGCCCTCCAGACCGCAGACAGACCTGATTGTAGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124898.2 |
||
| CDS-3UTR GCA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTTCTCCTCGTTCCCACTaGGCACCTCCTCACCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FWFRLFTGSGLALFILRCSPRSH*APPHLR Trigger: GCGGAGGTGAGGAGGTGCGCAGTGGGAACGAGGAGA...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCATCTCCTCGTTCCCACTaGGCACCTCCTCACCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSSPRSH*APPHLR Trigger: GCGGAGGTGAGGAGGTGCGCAGTGGGAACGAGGAGA...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTTTGGTCCGTACTCCATaGCGCTGTCACTGTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FWFRLFTGSGLALFILRCLVRTP*RCHCAA Trigger: CGCAGCACAGTGACAGCGTCATGGAGTACGGACCAA...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCATTGGTCCGTACTCCATaGCGCTGTCACTGTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSLVRTP*RCHCAA Trigger: CGCAGCACAGTGACAGCGTCATGGAGTACGGACCAA...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCCGTCTTCATCCCAGGTaGGGCCCAAAGTGTCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFRLHPR*GPKCPM Trigger: CATCGGACACTTTGGGCCCCACCTGGGATGAAGACG...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTGGCTTCCTGGCCTTCTaGGAGAAAGGCAGATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLFTGSGLALFILRCLETGFLAF*EKGRCS Trigger: AGAGCATCTGCCTTTCTCTCAGAAGGCCAGGAAGCC...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCACGCTGTCACTGTGCTaGGAGAGCATCTCCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFTLSLC*ESISSF Trigger: GAACGAGGAGATGCTCTCGCAGCACAGTGACAGCGT...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTACGCTGTCACTGTGCTaGGAGAGCATCTCCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLFTGSGLALFILRCLETTLSLC*ESISSF Trigger: GAACGAGGAGATGCTCTCGCAGCACAGTGACAGCGT...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTTGGAAGGAAGCCAACTaGAGCCGAGCTTTGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FWFRLFTGSGLALFILRCWKEAN*SRALKR Trigger: GCGCTTCAAAGCTCGGCTGCAGTTGGCTTCCTTCCA...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCTGGAAGGAAGCCAACTaGAGCCGAGCTTTGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFWKEAN*SRALKR Trigger: GCGCTTCAAAGCTCGGCTGCAGTTGGCTTCCTTCCA...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAACGTCTTCATCCCAGGTaGGGCCCAAAGTGTCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLERLHPR*GPKCPM Trigger: CATCGGACACTTTGGGCCCCACCTGGGATGAAGACG...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCGCTCGCCTAGCTTCCTaGCACTTGGAACCATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFARLAS*HLEPCS Trigger: TGAGCATGGTTCCAAGTGCCAGGAAGCTAGGCGAGC...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCGAGGATGTAAAGGAATaGCAGCTCGGATCGGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFEDVKE*QLGSAR Trigger: GCGAGCCGATCCGAGCTGCCATTCCTTTACATCCTC...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAGGCTTCCTGGCCTTCTaGGAGAAAGGCAGATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLEGFLAF*EKGRCS Trigger: AGAGCATCTGCCTTTCTCTCAGAAGGCCAGGAAGCC...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTGCCTATGGGACATGGTaGTCTAGGCTCAGAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RLFTGSGLALFILRCLETAYGTW*SRLRRM Trigger: CATCCTTCTGAGCCTAGAGCACCATGTCCCATAGGC...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCGCCTATGGGACATGGTaGTCTAGGCTCAGAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFAYGTW*SRLRRM Trigger: CATCCTTCTGAGCCTAGAGCACCATGTCCCATAGGC...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTACAGAAGGTGCCATGTaGTCTCCAGAAGTCGGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: FWFRLFTGSGLALFILRCTEGAM*SPEVGV Trigger: TACGCCGACTTCTGGAGAGCACATGGCACCTTCTGT...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTGCAGTGAGGAGGTCATaGCTTCTCAGGGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLFTGSGLALFILRCLETAVRRS*LLRASS Trigger: AGAAGAAGCCCTGAGAAGGCATGACCTCCTCACTGC...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCGCAGTGAGGAGGTCATaGCTTCTCAGGGCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFAVRRS*LLRASS Trigger: AGAAGAAGCCCTGAGAAGGCATGACCTCCTCACTGC...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAGCTCGCCTAGCTTCCTaGCACTTGGAACCATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLEARLAS*HLEPCS Trigger: TGAGCATGGTTCCAAGTGCCAGGAAGCTAGGCGAGC...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAGAGGATGTAAAGGAATaGCAGCTCGGATCGGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLEEDVKE*QLGSAR Trigger: GCGAGCCGATCCGAGCTGCCATTCCTTTACATCCTC...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCTGGGCCTCGTCTTCTTaGTTCCTGGGAAGAACTATG | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFWASSS*FLGRTM Trigger: CATAGTTCTTCCCAGGAATCAAGAAGACGAGGCCCA...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTAGTTCAGAGAGCCGCTaGGAGAGTTTCTCTGACATG | + |
|
Preference number: 4 (lower is better) Translates to: FWFRLFTGSGLALFILRCSSESR*ESFSDM Trigger: CATGTCAGAGAAACTCTCTCAGCGGCTCTCTGAACT...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTAGTTCAGAGAGCCGCTaGGAGAGTTTCTCTGACATG | + |
|
Preference number: 4 (lower is better) Translates to: RLFTGSGLALFILRCLETSSESR*ESFSDM Trigger: CATGTCAGAGAAACTCTCTCAGCGGCTCTCTGAACT...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCTGGTTCCACAGAAGGTaGCATGTGCTCTCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFWFHRR*HVLSRS Trigger: ACTTCTGGAGAGCACATGGCACCTTCTGTGGAACCA...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCATGGTTCCACAGAAGGTaGCATGTGCTCTCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSWFHRR*HVLSRS Trigger: ACTTCTGGAGAGCACATGGCACCTTCTGTGGAACCA...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCAAGGTGGCCCATTCTaGGAAAGAAAACCCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: FWFRLFTGSGLALFILRCQGGPF*ERKPNG Trigger: CCCATTGGGTTTTCTTTCCCAGAATGGGCCACCTTG...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018516.11 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCTTTGCCTATGGGACATaGTGCTCTAGGCTCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFFAYGT*CSRLRR Trigger: CCTTCTGAGCCTAGAGCACCATGTCCCATAGGCAAA...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCATTTGCCTATGGGACATaGTGCTCTAGGCTCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSFAYGT*CSRLRR Trigger: CCTTCTGAGCCTAGAGCACCATGTCCCATAGGCAAA...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCCTGTTAACGGCTTCCTaGCCTTCTGAGAGAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFLLTAS*PSERKA Trigger: TGCCTTTCTCTCAGAAGGCCAGGAAGCCGTTAACAG...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCTTGAGTTGTTCAACCTaGGCCATCTGCTGCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFLSCST*AICCFH Trigger: GTGGAAGCAGCAGATGGCCCAGGTTGAACAACTCAA...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCATTGAGTTGTTCAACCTaGGCCATCTGCTGCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSLSCST*AICCFH Trigger: GTGGAAGCAGCAGATGGCCCAGGTTGAACAACTCAA...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCCCTGGAGTTTCTTCTTaGATCGGTTCTCTCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFPGVSS*IGSLSA Trigger: CGCAGAGAGAGAACCGATCCAAGAAGAAACTCCAGG...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTGCCCAAAGTGTCCGATaGGAAGGAACACCTCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLFTGSGLALFILRCLETAQSVR*EGTPHK Trigger: TTTATGAGGTGTTCCTTCTCATCGGACACTTTGGGC...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCAGCCCAAAGTGTCCGATaGGAAGGAACACCTCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSAQSVR*EGTPHK Trigger: TTTATGAGGTGTTCCTTCTCATCGGACACTTTGGGC...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTGAATCAATTACCGCTTaGACATTGTGGGCCTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FWFRLFTGSGLALFILRCESITA*TLWASS Trigger: AGACGAGGCCCACAATGTCCAAGCGGTAATTGATTC...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAACTGTTAACGGCTTCCTaGCCTTCTGAGAGAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLELLTAS*PSERKA Trigger: TGCCTTTCTCTCAGAAGGCCAGGAAGCCGTTAACAG...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTGTCAGTGCCTTTGCTTaGAAATGGCATGAGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLFTGSGLALFILRCLETVSAFA*KWHESV Trigger: GACAGACTCATGCCATTTCCAAGCAAAGGCACTGAC...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCGTCAGTGCCTTTGCTTaGAAATGGCATGAGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFVSAFA*KWHESV Trigger: GACAGACTCATGCCATTTCCAAGCAAAGGCACTGAC...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTGCGACCATCTCCTTTTaGACTTGGAGCTGCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FWFRLFTGSGLALFILRCATISF*TWSCSF Trigger: AAAACTGCAGCTCCAAGTCCAAAAGGAGATGGTCGC...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCAGCGACCATCTCCTTTTaGACTTGGAGCTGCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSATISF*TWSCSF Trigger: AAAACTGCAGCTCCAAGTCCAAAAGGAGATGGTCGC...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAACCTGGAGTTTCTTCTTaGATCGGTTCTCTCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLEPGVSS*IGSLSA Trigger: CGCAGAGAGAGAACCGATCCAAGAAGAAACTCCAGG...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCAGAGTCCAGCTCATTCTaGTGCTGTCTCTTTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSESSSF*CCLFSS Trigger: CGAAGAAAAGAGACAGCACCAGAATGAGCTGGACTC...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCTTAGCATCACAGTCTTaGAGTTCGTGTATCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFLASQS*SSCILR Trigger: CCTGAGGATACACGAACTTCAAGACTGTGATGCTAA...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCATTAGCATCACAGTCTTaGAGTTCGTGTATCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSLASQS*SSCILR Trigger: CCTGAGGATACACGAACTTCAAGACTGTGATGCTAA...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCATTATGTGAGACAGGCTaGCCTGAAGGTAATCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSLCETG*PEGNPK Trigger: CTTTGGATTACCTTCAGGTCAGCCTGTCTCACATAA...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTAACGACTTCTCTGTATaGCTTCCCTGTTTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FWFRLFTGSGLALFILRCNDFSV*LPCFLF Trigger: GAAGAGGAAACAGGGAAGTCATACAGAGAAGTCGTT...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCAACGACTTCTCTGTATaGCTTCCCTGTTTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFNDFSV*LPCFLF Trigger: GAAGAGGAAACAGGGAAGTCATACAGAGAAGTCGTT...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTTTGGGAAAAGGTATGTaGAGTGTCTCCCAGCCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: FWFRLFTGSGLALFILRCLGKGM*SVSQPN Trigger: ATTAGGCTGGGAGACACTGCACATACCTTTTCCCAA...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCCAGCTCATTCTGGTaGTGTCTCTTTTCTTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLFTGSGLALFILRCLETSSSFW*CLFSSL Trigger: CAACGAAGAAAAGAGACAGCACCAGAATGAGCTGGA...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCTCCAGCTCATTCTGGTaGTGTCTCTTTTCTTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFSSSFW*CLFSSL Trigger: CAACGAAGAAAAGAGACAGCACCAGAATGAGCTGGA...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTGGAAAGAAAACCCAATaGGCCAGGGTTCAACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FWFRLFTGSGLALFILRCGKKTQ*ARVQHF Trigger: GAAATGTTGAACCCTGGCCCATTGGGTTTTCTTTCC...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018516.11 |
||
| CDS-3UTR CCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCAGCCTTTGCTTGGAAATaGCATGAGTCTGTCCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSAFAWK*HESVPL Trigger: TAAAGGGACAGACTCATGCCATTTCCAAGCAAAGGC...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCGCTGCTTCCACATTTTaGTCAGTGTTGGGTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFAASTF*SVLGQK Trigger: TTTCTGACCCAACACTGACCAAAATGTGGAAGCAGC...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCGTTGCGTTTCTCTTTaGCGTAGTTTCTTAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FWFRLFTGSGLALFILRCRCVSL*RSFLGL Trigger: GAGACCTAAGAAACTACGCCAAAGAGAAACGCAACG...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCCGTTGCGTTTCTCTTTaGCGTAGTTTCTTAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFRCVSL*RSFLGL Trigger: GAGACCTAAGAAACTACGCCAAAGAGAAACGCAACG...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCGACGTTCCTGTGAGATaGCTTCTGCTAGCAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFDVPVR*LLLAMK Trigger: TTTCATTGCTAGCAGAAGCCATCTCACAGGAACGTC...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCAGGATTTTTACTGTACTaGAAGGAAGCCAACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSGFLLY*KEANCS Trigger: GCTGCAGTTGGCTTCCTTCCAGTACAGTAAAAATCC...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAATTATGTGAGACAGGCTaGCCTGAAGGTAATCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLELCETG*PEGNPK Trigger: CTTTGGATTACCTTCAGGTCAGCCTGTCTCACATAA...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTCCAGCTTCTTCTCCATaGGAATCTTTAGAATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLFTGSGLALFILRCLETPASSP*ESLEYC Trigger: GCAGTATTCTAAAGATTCTCATGGAGAAGAAGCTGG...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCTGCTTGGAAATGGCATaGGTCTGTCCCTTTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFCLEMA*VCPFRF Trigger: AAATCTAAAGGGACAGACTCATGCCATTTCCAAGCA...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTGCTTGGAAATGGCATaGGTCTGTCCCTTTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: RLFTGSGLALFILRCLETCLEMA*VCPFRF Trigger: AAATCTAAAGGGACAGACTCATGCCATTTCCAAGCA...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCAATTTCTGTCTCACTTTaGGTTCTTGACGTTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSISVSL*VLDVPV Trigger: CACAGGAACGTCAAGAACTCAAAGTGAGACAGAAAT...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTATTTCTGTCTCACTTTaGGTTCTTGACGTTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLFTGSGLALFILRCLETISVSL*VLDVPV Trigger: CACAGGAACGTCAAGAACTCAAAGTGAGACAGAAAT...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAATTGGGAAAAGGTATGTaGAGTGTCTCCCAGCCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLELGKGM*SVSQPN Trigger: ATTAGGCTGGGAGACACTGCACATACCTTTTCCCAA...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTGTCTCTTTTCTTCGTTaGGTTTCTCTTTGGCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLFTGSGLALFILRCLETVSFLR*VSLWRS Trigger: ACTACGCCAAAGAGAAACGCAACGAAGAAAAGAGAC...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCGCACCATTACTTCTTTaGGAAAAGGTATGTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFAPLLL*EKVCAV Trigger: CACTGCACATACCTTTTCCCAAAGAAGTAATGGTGC...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018516.11 |
||
| CDS-3UTR CCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAGCCTTTGCTTGGAAATaGCATGAGTCTGTCCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLEAFAWK*HESVPL Trigger: TAAAGGGACAGACTCATGCCATTTCCAAGCAAAGGC...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAGACGTTCCTGTGAGATaGCTTCTGCTAGCAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLEDVPVR*LLLAMK Trigger: TTTCATTGCTAGCAGAAGCCATCTCACAGGAACGTC...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAGGATTTTTACTGTACTaGAAGGAAGCCAACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLEGFLLY*KEANCS Trigger: GCTGCAGTTGGCTTCCTTCCAGTACAGTAAAAATCC...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCATTTTGGACTTGGAGCTaGAGTTTTTCTGGAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSFWTWS*SFSGVS Trigger: ACTTACTCCAGAAAAACTGCAGCTCCAAGTCCAAAA...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTTTTTGGACTTGGAGCTaGAGTTTTTCTGGAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FWFRLFTGSGLALFILRCFWTWS*SFSGVS Trigger: ACTTACTCCAGAAAAACTGCAGCTCCAAGTCCAAAA...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR GCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAGTCTCTTTTCTTCGTTaGGTTTCTCTTTGGCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLEVSFLR*VSLWRS Trigger: ACTACGCCAAAGAGAAACGCAACGAAGAAAAGAGAC...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTATCCTCAGGTGTATGTaGCATTTAAAAAGGAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RLFTGSGLALFILRCLETILRCM*HLKRRL Trigger: TAACCTCCTTTTTAAATGTCACATACACCTGAGGAT...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCAAGAACTATGAGGTCTaGTACCTTTTCTCCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFKNYEV*YLFSQN Trigger: ATTTTGGGAGAAAAGGTACCAGACCTCATAGTTCTT...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTAAGAACTATGAGGTCTaGTACCTTTTCTCCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RLFTGSGLALFILRCLETKNYEV*YLFSQN Trigger: ATTTTGGGAGAAAAGGTACCAGACCTCATAGTTCTT...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCAAGAAACATAGAGAAATaGAAACTGTTCCAGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSRNIEK*KLFQHQ Trigger: CTGATGCTGGAACAGTTTCCATTTCTCTATGTTTCT...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCATTTTGGTCAGTGTTaGGTCAGAAACATAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FWFRLFTGSGLALFILRCHFGQC*VRNIEK Trigger: TTTCTCTATGTTTCTGACCCAACACTGACCAAAATG...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCACATTTTGGTCAGTGTTaGGTCAGAAACATAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFTGSGLALFILRCLETSHFGQC*VRNIEK Trigger: TTTCTCTATGTTTCTGACCCAACACTGACCAAAATG...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTGCAGCCTCTTGTTATaGTCATATTCTTTCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RLFTGSGLALFILRCLETCSLLL*SYSFLT Trigger: TGTCAAGAAAGAATATGACCATAACAAGAGGCTGCA...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAGATGCATTACTTCTTTaGGAAAAGGTATGTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLEDALLL*EKVCAV Trigger: CACTGCACATACCTTTTCCCAAAGAAGTAATGCATC...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103068.10 |
||
| CDS-3UTR TCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAATCCTCAGGTGTATGTaGCATTTAAAAAGGAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLEILRCM*HLKRRL Trigger: TAACCTCCTTTTTAAATGTCACATACACCTGAGGAT...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAAGAAACATAGAGAAATaGAAACTGTTCCAGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLERNIEK*KLFQHQ Trigger: CTGATGCTGGAACAGTTTCCATTTCTCTATGTTTCT...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAATGCAGCCTCTTGTTATaGTCATATTCTTTCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: FRLFTGSGLALFILRCLECSLLL*SYSFLT Trigger: TGTCAAGAAAGAATATGACCATAACAAGAGGCTGCA...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | AGGTCTGTCTGCGGTCTGGAGGGCAGCACTGTGGCCGGCAGATGGCCTAACCTTAACTGCAGCCGAGCTTaGAAGCGCTCAGCTTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSVCGLEGSTVAGRWPNLNCSRA*KRSASS Trigger: GCTAGAAGCTGAGCGCTTCAAAGCTCGGCTGCAGTT...AAGGTTAGGCCATCTGCCGGCCACAGTGCTGCCCTCCAGACCGCAGACAGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124898.2 |
||
| CDS CCA 90 bp | GTAAGGTGCCTTTCTGCACGTAGAAAATCCTGGCCTCGGCTTCTTTaGTCCGTACTCCATGACGCTGTCACTGTGCTGCGAGAGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VRCLSARRKSWPRLL*SVLHDAVTVLREHL Trigger: GAGATGCTCTCGCAGCACAGTGACAGCGTCATGGAGTACGGACCAAAGAAGCCGAGGCCAGGATTTTCTACGTGCAGAAAGGCACCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 90 bp | GGACTCAGCTTCGTCTTCATCCCAGGTGGGGCCCAAAGTGTCCGATaGGAAGGAACACCTCATAAAAGAAGCGTTTCTCCACTTCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLSFVFIPGGAQSVR*EGTPHKRSVSPLRL Trigger: GAGGCGAAGTGGAGAAACGCTTCTTTTATGAGGTGTTCCTTCTCATCGGACACTTTGGGCCCCACCTGGGATGAAGACGAAGCTGAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 90 bp | AGGTGCCATGTGCTCTCCAGAAGTCGGCGTAGACAAGTAGCGACTTaGCCAGAGGTATTCTTTGCCTATGGGACATGGTGCTCTAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RCHVLSRSRRRQVAT*PEVFFAYGTWCSRL Trigger: GAGCCTAGAGCACCATGTCCCATAGGCAAAGAATACCTCTGGTCAAGTCGCTACTTGTCTACGCCGACTTCTGGAGAGCACATGGCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS GCA 90 bp | TCAGGGATAGCAGACTGTGTTCACTTACTTTCATCGGAGACGCCTTaGTTGACTTCAGGCGACCATCTCCTTTTGGACTTGGAGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGIADCVHLLSSETP*LTSGDHLLLDLELQ Trigger: CTGCAGCTCCAAGTCCAAAAGGAGATGGTCGCCTGAAGTCAAGCAAGGCGTCTCCGATGAAAGTAAGTGAACACAGTCTGCTATCCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS GCA 90 bp | TGGCCTCTTGGGAAAGGATTTTTACTGTACTGGAAGGAAGCCAACTaGAGCCGAGCTTTGAAGCGCTCAGCTTCTAGCTCCCGGAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: WPLGKGFLLYWKEAN*SRALKRSASSSRKK Trigger: TTTCTTCCGGGAGCTAGAAGCTGAGCGCTTCAAAGCTCGGCTGCAGTTGGCTTCCTTCCAGTACAGTAAAAATCCTTTCCCAAGAGGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 ENSMUST00000124898.2 |
||
| CDS CCA 90 bp | ACATCCAGTCTAGTTCAGAGAGCCGCTGAGAGAGTTTCTCTGACATaGCGTGCAGTTCTTGTTCTGTTAACGGCTTCCTGGCCTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSSLVQRAAERVSLT*RAVLVLLTASWPSE Trigger: CTCAGAAGGCCAGGAAGCCGTTAACAGAACAAGAACTGCACGCCATGTCAGAGAAACTCTCTCAGCGGCTCTCTGAACTAGACTGGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 90 bp | AAGGATTTTTACTGTACTGGAAGGAAGCCAACTGCAGCCGAGCTTTaGAGCGCTCAGCTTCTAGCTCCCGGAAGAAAGCATCATCGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: KDFYCTGRKPTAAEL*SAQLLAPGRKHHRR Trigger: ACGACGATGATGCTTTCTTCCGGGAGCTAGAAGCTGAGCGCTTCAAAGCTCGGCTGCAGTTGGCTTCCTTCCAGTACAGTAAAAATCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 ENSMUST00000124898.2 |
||
| CDS TCA 90 bp | GCGAGTGAATCAATTACCGCTTGGACATTGTGGGCCTCGTCTTCTTaGTTCCTGGGAAGAACTATGAGGTCTGGTACCTTTTCTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ASESITAWTLWASSS*FLGRTMRSGTFSPK Trigger: TTTGGGAGAAAAGGTACCAGACCTCATAGTTCTTCCCAGGAATCAAGAAGACGAGGCCCACAATGTCCAAGCGGTAATTGATTCACTCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 90 bp | TTCGCCTCCTCGGTACGTTCTAGGTCCTCCCCAGCTTCTTCTCCATaGGAATCTTTAGAATACTGCTCAGTTTCACTTTTGTTGGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FASSVRSRSSPASSP*ESLEYCSVSLLLGD Trigger: GTCTCCCAACAAAAGTGAAACTGAGCAGTATTCTAAAGATTCTCATGGAGAAGAAGCTGGGGAGGACCTAGAACGTACCGAGGAGGCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 90 bp | TCACCCAGGGCAGTTTTTAACATCCAGTCTAGTTCAGAGAGCCGCTaGGAGAGTTTCTCTGACATGGCGTGCAGTTCTTGTTCTGTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPRAVFNIQSSSESR*ESFSDMACSSCSVN Trigger: GTTAACAGAACAAGAACTGCACGCCATGTCAGAGAAACTCTCTCAGCGGCTCTCTGAACTAGACTGGATGTTAAAAACTGCCCTGGGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 90 bp | TCCTGTTATGTGAGACAGGCTGACCTGAAGGTAATCCAAAGCGAGTaGATCAATTACCGCTTGGACATTGTGGGCCTCGTCTTCTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: SCYVRQADLKVIQSE*INYRLDIVGLVFLI Trigger: AATCAAGAAGACGAGGCCCACAATGTCCAAGCGGTAATTGATTCACTCGCTTTGGATTACCTTCAGGTCAGCCTGTCTCACATAACAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CCA 90 bp | TTGTTCAACCTGGGCCATCTGCTGCTTCCACATTTTGGTCAGTGTTaGGTCAGAAACATAGAGAAATGGAAACTGTTCCAGCATCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LFNLGHLLLPHFGQC*VRNIEKWKLFQHQG Trigger: TCCCTGATGCTGGAACAGTTTCCATTTCTCTATGTTTCTGACCCAACACTGACCAAAATGTGGAAGCAGCAGATGGCCCAGGTTGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCCTCTGCGCTTCCCTTTaGAGTTGTTCAACCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFLCASL*SCSTWA Trigger: GGCCCAGGTTGAACAACTCAAAAGGGAAGCGCAGAG...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCACTCTGCGCTTCCCTTTaGAGTTGTTCAACCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LFTGSGLALFILRCLETSLCASL*SCSTWA Trigger: GGCCCAGGTTGAACAACTCAAAAGGGAAGCGCAGAG...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCAAACTGCAGCCGAGCTTaGAAGCGCTCAGCTTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LFTGSGLALFILRCLETSNCSRA*KRSASS Trigger: GCTAGAAGCTGAGCGCTTCAAAGCTCGGCTGCAGTT...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 90 bp | CTTGGACATTGTGGGCCTCGTCTTCTTGATTCCTGGGAAGAACTATaGGGTCTGGTACCTTTTCTCCCAAAATGGATTGATAAAGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LGHCGPRLLDSWEEL*GLVPFLPKWIDKGQ Trigger: TTGCCCTTTATCAATCCATTTTGGGAGAAAAGGTACCAGACCTCATAGTTCTTCCCAGGAATCAAGAAGACGAGGCCCACAATGTCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS GCA 90 bp | TCTCCATCGAGTCCAGCTCATTCTGGTGCTGTCTCTTTTCTTCGTTaGGTTTCTCTTTGGCGTAGTTTCTTAGGTCTCGTAGTCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SPSSPAHSGAVSFLR*VSLWRSFLGLVVFV Trigger: AACAAAGACTACGAGACCTAAGAAACTACGCCAAAGAGAAACGCAACGAAGAAAAGAGACAGCACCAGAATGAGCTGGACTCGATGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCAGGCGACCATCTCCTTTaGGACTTGGAGCTGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFTGSGLALFILRCLETSGDHLL*DLELQF Trigger: AAACTGCAGCTCCAAGTCCAAAAGGAGATGGTCGCC...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCTCGGTCCCTGAAGTCTaGCAGCCTCTTGTTATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFSVPEV*QPLVMV Trigger: GACCATAACAAGAGGCTGCAAGACTTCAGGGACCGA...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAAACTGCAGCCGAGCTTaGAAGCGCTCAGCTTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: FRLFTGSGLALFILRCLENCSRA*KRSASS Trigger: GCTAGAAGCTGAGCGCTTCAAAGCTCGGCTGCAGTT...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAGGCGACCATCTCCTTTaGGACTTGGAGCTGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FRLFTGSGLALFILRCLEGDHLL*DLELQF Trigger: AAACTGCAGCTCCAAGTCCAAAAGGAGATGGTCGCC...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CCA 90 bp | CTTGGAACCATGCTCATAGGAGGAGTTTCTGATGCATTACTTCTTTaGGAAAAGGTATGTGCAGTGTCTCCCAGCCTAATTATTTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LGTMLIGGVSDALLL*EKVCAVSPSLIISP Trigger: AGGTGAAATAATTAGGCTGGGAGACACTGCACATACCTTTTCCCAAAGAAGTAATGCATCAGAAACTCCTCCTATGAGCATGGTTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCAGGAGGTTATTGGCAATaGTTACCCATTCAGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFTGSGLALFILRCLETSGGYWQ*LPIQPL Trigger: CAGAGGCTGAATGGGTAACAATTGCCAATAACCTCC...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTGCTGCTTCCACATTTaGGTCAGTGTTGGGTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RLFTGSGLALFILRCLETCCFHI*VSVGSE Trigger: TTCTGACCCAACACTGACCAAAATGTGGAAGCAGCA...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTTGCTGCTTCCACATTTaGGTCAGTGTTGGGTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FWFRLFTGSGLALFILRCCCFHI*VSVGSE Trigger: TTCTGACCCAACACTGACCAAAATGTGGAAGCAGCA...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 90 bp | TCTTCACCTTATGTAATGTCTGAGCCTGGAATTTCTGTCTCACTTTaGGTTCTTGACGTTCCTGTGAGATGGCTTCTGCTAGCAATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSPYVMSEPGISVSL*VLDVPVRWLLLAMK Trigger: TTTCATTGCTAGCAGAAGCCATCTCACAGGAACGTCAAGAACTCAAAGTGAGACAGAAATTCCAGGCTCAGACATTACATAAGGTGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 ENSMUST00000124898.2 |
||
| CDS CCA 90 bp | TGTTTTCTTAGTTCCCGTTCAAATGCTTCAGTCAGTGCCTTTGCTTaGAAATGGCATGAGTCTGTCCCTTTAGATTTGTGCTGCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CFLSSRSNASVSAFA*KWHESVPLDLCCLF Trigger: AAAAAGGCAGCACAAATCTAAAGGGACAGACTCATGCCATTTCCAAGCAAAGGCACTGACTGAAGCATTTGAACGGGAACTAAGAAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CCA 90 bp | CCAGCTCATTCTGGTGCTGTCTCTTTTCTTCGTTGCGTTTCTCTTTaGCGTAGTTTCTTAGGTCTCGTAGTCTTTGTTTCTGAATTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PAHSGAVSFLRCVSL*RSFLGLVVFVSEFV Trigger: TACAAATTCAGAAACAAAGACTACGAGACCTAAGAAACTACGCCAAAGAGAAACGCAACGAAGAAAAGAGACAGCACCAGAATGAGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 90 bp | ATATTTCCGGGCACGAACACTTTGATGACGATTTTCTTTTATCTTTaGTTGGGTCAACCTTTGTCTCTGAATTCGGTCCCTGAAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IFPGTNTLMTIFFYL*LGQPLSLNSVPEVL Trigger: CAAGACTTCAGGGACCGAATTCAGAGACAAAGGTTGACCCAATCAAAGATAAAAGAAAATCGTCATCAAAGTGTTCGTGCCCGGAAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTATTAGCATCACAGTCTaGAAGTTCGTGTATCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FWFRLFTGSGLALFILRCISITV*KFVYPQ Trigger: CTGAGGATACACGAACTTCAAGACTGTGATGCTAAT...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTTCTAATTGTCTGTGTTaGTTCACTGAAGATGGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: FWFRLFTGSGLALFILRCSNCLC*FTEDGD Trigger: GTCGCCATCTTCAGTGAACAAACACAGACAATTAGA...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | TTCTGGTTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCCGGGCACGAACACTTaGATGACGATTTTCTTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: FWFRLFTGSGLALFILRCPGTNT*MTIFFY Trigger: ATAAAAGAAAATCGTCATCAAAGTGTTCGTGCCCGG...ACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAACCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAATTAGCATCACAGTCTaGAAGTTCGTGTATCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FRLFTGSGLALFILRCLEISITV*KFVYPQ Trigger: CTGAGGATACACGAACTTCAAGACTGTGATGCTAAT...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAATCTAATTGTCTGTGTTaGTTCACTGAAGATGGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: FRLFTGSGLALFILRCLESNCLC*FTEDGD Trigger: GTCGCCATCTTCAGTGAACAAACACAGACAATTAGA...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | AGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTAAGTCTTGCAGCCTCTaGTTATGGTCATATTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLFTGSGLALFILRCLETKSCSL*LWSYSF Trigger: GAAAGAATATGACCATAACAAGAGGCTGCAAGACTT...AGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCAAAGTCTTGCAGCCTCTaGTTATGGTCATATTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFTGSGLALFILRCLETSKSCSL*LWSYSF Trigger: GAAAGAATATGACCATAACAAGAGGCTGCAAGACTT...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | TTTAGACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAACCGGGCACGAACACTTaGATGACGATTTTCTTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: FRLFTGSGLALFILRCLEPGTNT*MTIFFY Trigger: ATAAAAGAAAATCGTCATCAAAGTGTTCGTGCCCGG...TTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGTCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | CTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCATCATCTTCATCATTTTaGCACGTAACTGAACTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LFTGSGLALFILRCLETSSSSSF*HVTELC Trigger: ACAGAGTTCAGTTACGTGCAAAAATGATGAAGATGA...TGAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS-3UTR CAA 90 bp | ACTGTTTACTGGCTCAGGTCTAGCTCTGTTCATATTAAGGTGTCTAGAAACTTCTCATCTTCATCATTTTaGCACGTAACTGAACTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TVYWLRSSSVHIKVSRNFSSSSF*HVTELC Trigger: ACAGAGTTCAGTTACGTGCAAAAATGATGAAGATGA...GAAGTTTCTAGACACCTTAATATGAACAGAGCTAGACCTGAGCCAGTAAACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 72 bp | CCTGGCACTTGGAACCATGCTCATAGGAGGAGTTTCTaGTGCTGCCTCACAAGGTGGCCCATTCTGGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PGTWNHAHRRSF*CCLTRWPILGK Trigger: CTTTCCCAGAATGGGCCACCTTGTGAGGCAGCATCAGAAACTCCTCCTATGAGCATGGTTCCAAGTGCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018516.11 |
||
| CDS TCA 72 bp | CGGCTTCCTGGCCTTCTGAGAGAAAGGCAGATGCTCTaGGGGGATCGCAGCTCTGTTTTCATCTCTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLPGLLRERQML*GDRSSVFISFS Trigger: GGAGAAAGAGATGAAAACAGAGCTGCGATCCCCTCAGAGCATCTGCCTTTCTCTCAGAAGGCCAGGAAGCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CCA 72 bp | TTTCACCTGTGGACTCAGCTTCGTCTTCATCCCAGGTaGGGCCCAAAGTGTCCGATGAGAAGGAACACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FHLWTQLRLHPR*GPKCPMRRNTS Trigger: TGAGGTGTTCCTTCTCATCGGACACTTTGGGCCCCACCTGGGATGAAGACGAAGCTGAGTCCACAGGTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CCA 72 bp | CTTTCTGCACGTAGAAAATCCTGGCCTCGGCTTCTTTaGTCCGTACTCCATGACGCTGTCACTGTGCTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LSARRKSWPRLL*SVLHDAVTVLR Trigger: TCGCAGCACAGTGACAGCGTCATGGAGTACGGACCAAAGAAGCCGAGGCCAGGATTTTCTACGTGCAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 72 bp | TGCAGTTCTTGTTCTGTTAACGGCTTCCTGGCCTTCTaGGAGAAAGGCAGATGCTCTGAGGGGATCGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CSSCSVNGFLAF*EKGRCSEGIAA Trigger: AGCTGCGATCCCCTCAGAGCATCTGCCTTTCTCTCAGAAGGCCAGGAAGCCGTTAACAGAACAAGAACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 72 bp | TACTGTACTGGAAGGAAGCCAACTGCAGCCGAGCTTTaGAGCGCTCAGCTTCTAGCTCCCGGAAGAAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: YCTGRKPTAAEL*SAQLLAPGRKH Trigger: ATGCTTTCTTCCGGGAGCTAGAAGCTGAGCGCTTCAAAGCTCGGCTGCAGTTGGCTTCCTTCCAGTACAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 ENSMUST00000124898.2 |
||
| CDS CCA 72 bp | ACATGGCGTGCAGTTCTTGTTCTGTTAACGGCTTCCTaGCCTTCTGAGAGAAAGGCAGATGCTCTGAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: TWRAVLVLLTAS*PSERKADALRG Trigger: TCCCCTCAGAGCATCTGCCTTTCTCTCAGAAGGCCAGGAAGCCGTTAACAGAACAAGAACTGCACGCCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CAA 72 bp | TTACTGTACTGGAAGGAAGCCAACTGCAGCCGAGCTTaGAAGCGCTCAGCTTCTAGCTCCCGGAAGAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLYWKEANCSRA*KRSASSSRKKA Trigger: TGCTTTCTTCCGGGAGCTAGAAGCTGAGCGCTTCAAAGCTCGGCTGCAGTTGGCTTCCTTCCAGTACAGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 ENSMUST00000124898.2 |
||
| CDS CCA 72 bp | GGAGTTTCTGATGCTGCCTCACAAGGTGGCCCATTCTaGGAAAGAAAACCCAATGGGCCAGGGTTCAACATT | + |
|
Preference number: 6 (lower is better) Translates to: GVSDAASQGGPF*ERKPNGPGFNI Trigger: AATGTTGAACCCTGGCCCATTGGGTTTTCTTTCCCAGAATGGGCCACCTTGTGAGGCAGCATCAGAAACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018516.11 |
||
| CDS CCA 72 bp | CTAGTTCAGAGAGCCGCTGAGAGAGTTTCTCTGACATaGCGTGCAGTTCTTGTTCTGTTAACGGCTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LVQRAAERVSLT*RAVLVLLTASW Trigger: CCAGGAAGCCGTTAACAGAACAAGAACTGCACGCCATGTCAGAGAAACTCTCTCAGCGGCTCTCTGAACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CAA 90 bp | CTTTCATCGGAGACGCCTTGCTTGACTTCAGGCGACCATCTCCTTTaGGACTTGGAGCTGCAGTTTTTCTGGAGTAAGTCTTCTGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: LSSETPCLTSGDHLL*DLELQFFWSKSSGP Trigger: AGGTCCAGAAGACTTACTCCAGAAAAACTGCAGCTCCAAGTCCAAAAGGAGATGGTCGCCTGAAGTCAAGCAAGGCGTCTCCGATGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CAA 90 bp | GGGATAGCAGACTGTGTTCACTTACTTTCATCGGAGACGCCTTGCTaGACTTCAGGCGACCATCTCCTTTTGGACTTGGAGCTGCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GIADCVHLLSSETPC*TSGDHLLLDLELQF Trigger: AAACTGCAGCTCCAAGTCCAAAAGGAGATGGTCGCCTGAAGTCAAGCAAGGCGTCTCCGATGAAAGTAAGTGAACACAGTCTGCTATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CAA 90 bp | ATCAGGGATAGCAGACTGTGTTCACTTACTTTCATCGGAGACGCCTaGCTTGACTTCAGGCGACCATCTCCTTTTGGACTTGGAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: IRDSRLCSLTFIGDA*LDFRRPSPFGLGAA Trigger: TGCAGCTCCAAGTCCAAAAGGAGATGGTCGCCTGAAGTCAAGCAAGGCGTCTCCGATGAAAGTAAGTGAACACAGTCTGCTATCCCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CAA 90 bp | AAAGGATTTTTACTGTACTGGAAGGAAGCCAACTGCAGCCGAGCTTaGAAGCGCTCAGCTTCTAGCTCCCGGAAGAAAGCATCATCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: KGFLLYWKEANCSRA*KRSASSSRKKASSS Trigger: CGACGATGATGCTTTCTTCCGGGAGCTAGAAGCTGAGCGCTTCAAAGCTCGGCTGCAGTTGGCTTCCTTCCAGTACAGTAAAAATCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 ENSMUST00000124898.2 |
||
| CDS TCA 72 bp | TTCGTCTTCATCCCAGGTGGGGCCCAAAGTGTCCGATaGGAAGGAACACCTCATAAAAGAAGCGTTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FVFIPGGAQSVR*EGTPHKRSVSP Trigger: TGGAGAAACGCTTCTTTTATGAGGTGTTCCTTCTCATCGGACACTTTGGGCCCCACCTGGGATGAAGACGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 72 bp | ACTGTGTTCACTTACTTTCATCGGAGACGCCTTGCTTaGCTTCAGGCGACCATCTCCTTTTGGACTTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TVFTYFHRRRLA*LQATISFWTWS Trigger: GCTCCAAGTCCAAAAGGAGATGGTCGCCTGAAGTCAAGCAAGGCGTCTCCGATGAAAGTAAGTGAACACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS GCA 72 bp | GCAGACTGTGTTCACTTACTTTCATCGGAGACGCCTTaGTTGACTTCAGGCGACCATCTCCTTTTGGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: ADCVHLLSSETP*LTSGDHLLLDL Trigger: CAAGTCCAAAAGGAGATGGTCGCCTGAAGTCAAGCAAGGCGTCTCCGATGAAAGTAAGTGAACACAGTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CAA 72 bp | GACTGTGTTCACTTACTTTCATCGGAGACGCCTTGCTaGACTTCAGGCGACCATCTCCTTTTGGACTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DCVHLLSSETPC*TSGDHLLLDLE Trigger: CTCCAAGTCCAAAAGGAGATGGTCGCCTGAAGTCAAGCAAGGCGTCTCCGATGAAAGTAAGTGAACACAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CAA 72 bp | CTTGGATCGGTTCTCTCTCTGCGCTTCCCTTTTGAGTaGTTCAACCTGGGCCATCTGCTGCTTCCACATTTT | + |
|
Preference number: 6 (lower is better) Translates to: LGSVLSLRFPFE*FNLGHLLLPHF Trigger: AAAATGTGGAAGCAGCAGATGGCCCAGGTTGAACAACTCAAAAGGGAAGCGCAGAGAGAGAACCGATCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CAA 90 bp | CGGTCCCTGAAGTCTTGCAGCCTCTTGTTATGGTCATATTCTTTCTaGACAAGAGCAGTGAGGAGGTCATGCCTTCTCAGGGCTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSLKSCSLLLWSYSF*TRAVRRSCLLRASS Trigger: AGAAGAAGCCCTGAGAAGGCATGACCTCCTCACTGCTCTTGTCAAGAAAGAATATGACCATAACAAGAGGCTGCAAGACTTCAGGGACCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CAA 72 bp | CCTTGCTTGACTTCAGGCGACCATCTCCTTTTGGACTaGGAGCTGCAGTTTTTCTGGAGTAAGTCTTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PCLTSGDHLLLD*ELQFFWSKSSG Trigger: TCCAGAAGACTTACTCCAGAAAAACTGCAGCTCCAAGTCCAAAAGGAGATGGTCGCCTGAAGTCAAGCAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CAA 72 bp | AGCAGACTGTGTTCACTTACTTTCATCGGAGACGCCTaGCTTGACTTCAGGCGACCATCTCCTTTTGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: SRLCSLTFIGDA*LDFRRPSPFGL Trigger: AAGTCCAAAAGGAGATGGTCGCCTGAAGTCAAGCAAGGCGTCTCCGATGAAAGTAAGTGAACACAGTCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CAA 90 bp | GTTGTTCAACCTGGGCCATCTGCTGCTTCCACATTTTGGTCAGTGTaGGGTCAGAAACATAGAGAAATGGAAACTGTTCCAGCATCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VVQPGPSAASTFWSV*GQKHREMETVPASG Trigger: CCCTGATGCTGGAACAGTTTCCATTTCTCTATGTTTCTGACCCAACACTGACCAAAATGTGGAAGCAGCAGATGGCCCAGGTTGAACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 72 bp | GCAGTTTTTAACATCCAGTCTAGTTCAGAGAGCCGCTaGGAGAGTTTCTCTGACATGGCGTGCAGTTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: AVFNIQSSSESR*ESFSDMACSSC Trigger: ACAAGAACTGCACGCCATGTCAGAGAAACTCTCTCAGCGGCTCTCTGAACTAGACTGGATGTTAAAAACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CCA 72 bp | CTGGGCCATCTGCTGCTTCCACATTTTGGTCAGTGTTaGGTCAGAAACATAGAGAAATGGAAACTGTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGHLLLPHFGQC*VRNIEKWKLFQ Trigger: CTGGAACAGTTTCCATTTCTCTATGTTTCTGACCCAACACTGACCAAAATGTGGAAGCAGCAGATGGCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CAA 72 bp | ATCAATTACCGCTTGGACATTGTGGGCCTCGTCTTCTaGATTCCTGGGAAGAACTATGAGGTCTGGTACCTT | + |
|
Preference number: 6 (lower is better) Translates to: INYRLDIVGLVF*IPGKNYEVWYL Trigger: AAGGTACCAGACCTCATAGTTCTTCCCAGGAATCAAGAAGACGAGGCCCACAATGTCCAAGCGGTAATTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CAA 72 bp | CCTGGGCCATCTGCTGCTTCCACATTTTGGTCAGTGTaGGGTCAGAAACATAGAGAAATGGAAACTGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PGPSAASTFWSV*GQKHREMETVP Trigger: TGGAACAGTTTCCATTTCTCTATGTTTCTGACCCAACACTGACCAAAATGTGGAAGCAGCAGATGGCCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 72 bp | TGTGGGCCTCGTCTTCTTGATTCCTGGGAAGAACTATaGGGTCTGGTACCTTTTCTCCCAAAATGGATTGAT | + |
|
Preference number: 6 (lower is better) Translates to: CGPRLLDSWEEL*GLVPFLPKWID Trigger: ATCAATCCATTTTGGGAGAAAAGGTACCAGACCTCATAGTTCTTCCCAGGAATCAAGAAGACGAGGCCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS GCA 72 bp | AGTCCAGCTCATTCTGGTGCTGTCTCTTTTCTTCGTTaGGTTTCTCTTTGGCGTAGTTTCTTAGGTCTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: SPAHSGAVSFLR*VSLWRSFLGLV Trigger: TACGAGACCTAAGAAACTACGCCAAAGAGAAACGCAACGAAGAAAAGAGACAGCACCAGAATGAGCTGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 ENSMUST00000124898.2 |
||
| CDS CCA 72 bp | CGTTCAAATGCTTCAGTCAGTGCCTTTGCTTGGAAATaGCATGAGTCTGTCCCTTTAGATTTGTGCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RSNASVSAFAWK*HESVPLDLCCL Trigger: AAGGCAGCACAAATCTAAAGGGACAGACTCATGCCATTTCCAAGCAAAGGCACTGACTGAAGCATTTGAACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CCA 72 bp | AGTTCCCGTTCAAATGCTTCAGTCAGTGCCTTTGCTTaGAAATGGCATGAGTCTGTCCCTTTAGATTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRSNASVSAFA*KWHESVPLDLC Trigger: GCACAAATCTAAAGGGACAGACTCATGCCATTTCCAAGCAAAGGCACTGACTGAAGCATTTGAACGGGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 72 bp | TCGGTACGTTCTAGGTCCTCCCCAGCTTCTTCTCCATaGGAATCTTTAGAATACTGCTCAGTTTCACTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SVRSRSSPASSP*ESLEYCSVSLL Trigger: CAAAAGTGAAACTGAGCAGTATTCTAAAGATTCTCATGGAGAAGAAGCTGGGGAGGACCTAGAACGTACCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 72 bp | TTGATTGGGTCAACCTTTGTCTCTGAATTCGGTCCCTaGAGTCTTGCAGCCTCTTGTTATGGTCATATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LIGSTFVSEFGP*SLAASCYGHIL Trigger: AAGAATATGACCATAACAAGAGGCTGCAAGACTTCAGGGACCGAATTCAGAGACAAAGGTTGACCCAATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 72 bp | TATGTAATGTCTGAGCCTGGAATTTCTGTCTCACTTTaGGTTCTTGACGTTCCTGTGAGATGGCTTCTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: YVMSEPGISVSL*VLDVPVRWLLL Trigger: TAGCAGAAGCCATCTCACAGGAACGTCAAGAACTCAAAGTGAGACAGAAATTCCAGGCTCAGACATTACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 ENSMUST00000124898.2 |
||
| CDS CCA 72 bp | ATGCTCATAGGAGGAGTTTCTGATGCATTACTTCTTTaGGAAAAGGTATGTGCAGTGTCTCCCAGCCTAATT | + |
|
Preference number: 6 (lower is better) Translates to: MLIGGVSDALLL*EKVCAVSPSLI Trigger: AATTAGGCTGGGAGACACTGCACATACCTTTTCCCAAAGAAGTAATGCATCAGAAACTCCTCCTATGAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103068.10 |
||
| CDS TCA 72 bp | ACTGCTCAGTTTCACTTTTGTTGGGAGACGATTCACTaGTGTGTTCTGTCAGATAATCCAGCAATCCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: TAQFHFCWETIH*CVLSDNPAIHQ Trigger: TTGATGGATTGCTGGATTATCTGACAGAACACATCAGTGAATCGTCTCCCAACAAAAGTGAAACTGAGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS GCA 72 bp | ATTTTGAGCACCATTACTTCTTTGGGAAAAGGTATGTaGAGTGTCTCCCAGCCTAATTATTTCACCTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ILSTITSLGKGM*SVSQPNYFTCG Trigger: TCCACAGGTGAAATAATTAGGCTGGGAGACACTGCACATACCTTTTCCCAAAGAAGTAATGGTGCTCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018516.11 |
||
| CDS TCA 72 bp | CTTTCACTATGTTTTCTCCTGTTATGTGAGACAGGCTaGCCTGAAGGTAATCCAAAGCGAGTGAATCAATTA | + |
|
Preference number: 6 (lower is better) Translates to: LSLCFLLLCETG*PEGNPKRVNQL Trigger: TAATTGATTCACTCGCTTTGGATTACCTTCAGGTCAGCCTGTCTCACATAACAGGAGAAAACATAGTGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS TCA 72 bp | TTTTCTTTTATCTTTGATTGGGTCAACCTTTGTCTCTaGATTCGGTCCCTGAAGTCTTGCAGCCTCTTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: FSFIFDWVNLCL*IRSLKSCSLLL Trigger: TAACAAGAGGCTGCAAGACTTCAGGGACCGAATTCAGAGACAAAGGTTGACCCAATCAAAGATAAAAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||
| CDS CAA 72 bp | AGATCATTTCTTCCCGGGTTCTCATCTTCATCATTTTaGCACGTAACTGAACTCTGTAATCATCATAATATT | + |
|
Preference number: 6 (lower is better) Translates to: RSFLPGFSSSSF*HVTELCNHHNI Trigger: AATATTATGATGATTACAGAGTTCAGTTACGTGCAAAAATGATGAAGATGAGAACCCGGGAAGAAATGATCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018516.11 ENSMUST00000103068.10 |
||