Pregenerated sensors for CEP89 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023072Ensembl transcript IDs: ENSMUST00000079414.12, ENSMUST00000141704.8, ENSMUST00000150421.2, ENSMUST00000206230.2, ENSMUST00000206854.2
Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GGTCTCCCTGAGAGGAGCGTCTCAAGCAAGTGTCCGGAGGAGCTGTaGCGTGCTGTGTGCTTCTTCTCTCCAGGGTGGCCTGGAGAAGGC | + |
Preference number: 1 (lower is better) Translates to: GLPERSVSSKCPEEL*RAVCFFSPGWPGEG Trigger: GCCTTCTCCAGGCCACCCTGGAGAGAAGAAGCACACAGCACGTCACAGCTCCTCCGGACACTTGCTTGAGACGCTCCTCTCAGGGAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR GCA 90 bp | CTGCTGTTCCTTCAGGCGGTGATGGATATCCCCCAGCTTCAGTGCTaGCTGCTTCTTGTACCCCTTTACCCTCTCCTCCAGCTTGCCCAG | + |
Preference number: 1 (lower is better) Translates to: LLFLQAVMDIPQLQC*LLLVPLYPLLQLAQ Trigger: CTGGGCAAGCTGGAGGAGAGGGTAAAGGGGTACAAGAAGCAGGCAGCACTGAAGCTGGGGGATATCCATCACCGCCTGAAGGAACAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR GCA 90 bp | GCGATCTTGCTATCCAGCTGTGCCTTGAGCTCTGTGCATTTGGCCTaGAAGCTCTCCAGCTGCTCCGTGCTTTCCACGAGCTGCTTTTCC | + |
Preference number: 1 (lower is better) Translates to: AILLSSCALSSVHLA*KLSSCSVLSTSCFS Trigger: GGAAAAGCAGCTCGTGGAAAGCACGGAGCAGCTGGAGAGCTTGCAGGCCAAATGCACAGAGCTCAAGGCACAGCTGGATAGCAAGATCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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3UTR TCA 90 bp | TTTTCCTGCAGCATCCGATGTAGGTGCTTCACCTCCTTCTGGTACTaGGCTGCTTTGCCGGCAAAGTCCTCCTGCTGTTCCTTCAGGCGG | + |
Preference number: 1 (lower is better) Translates to: FSCSIRCRCFTSFWY*AALPAKSSCCSFRR Trigger: CCGCCTGAAGGAACAGCAGGAGGACTTTGCCGGCAAAGCAGCTCAGTACCAGAAGGAGGTGAAGCACCTACATCGGATGCTGCAGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR GCA 90 bp | CATCTCTGCCATCTCCCACATCCTTCCAGGTGGACTCTGACTCCCTaGAGCTGGTTGACACCTGTGTTTCAGCATCTTCATCCTCCCCGT | + |
Preference number: 1 (lower is better) Translates to: HLCHLPHPSRWTLTP*SWLTPVFQHLHPPR Trigger: ACGGGGAGGATGAAGATGCTGAAACACAGGTGTCAACCAGCTGCAGGGAGTCAGAGTCCACCTGGAAGGATGTGGGAGATGGCAGAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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3UTR CCA 90 bp | TCTCCAGGGTGGCCTGGAGAAGGCTCCGCATCCTCCTGTTCTCCTTaGCAGTGGACTCCAGGACCATTTCAAGCTCACCTTCCATATTTC | + |
Preference number: 1 (lower is better) Translates to: SPGWPGEGSASSCSP*QWTPGPFQAHLPYF Trigger: GAAATATGGAAGGTGAGCTTGAAATGGTCCTGGAGTCCACTGCCAAGGAGAACAGGAGGATGCGGAGCCTTCTCCAGGCCACCCTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR CCA 90 bp | TGCCATCTCCCACATCCTTCCAGGTGGACTCTGACTCCCTGCAGCTaGTTGACACCTGTGTTTCAGCATCTTCATCCTCCCCGTAGCCTA | + |
Preference number: 1 (lower is better) Translates to: CHLPHPSRWTLTPCS*LTPVFQHLHPPRSL Trigger: TAGGCTACGGGGAGGATGAAGATGCTGAAACACAGGTGTCAACCAGCTGCAGGGAGTCAGAGTCCACCTGGAAGGATGTGGGAGATGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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3UTR GCA 90 bp | GCATCCGATGTAGGTGCTTCACCTCCTTCTGGTACTGAGCTGCTTTaGCGGCAAAGTCCTCCTGCTGTTCCTTCAGGCGGTGATGGATAT | + |
Preference number: 1 (lower is better) Translates to: ASDVGASPPSGTELL*RQSPPAVPSGGDGY Trigger: ATATCCATCACCGCCTGAAGGAACAGCAGGAGGACTTTGCCGGCAAAGCAGCTCAGTACCAGAAGGAGGTGAAGCACCTACATCGGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR CCA 90 bp | GGGTGGCCTGGAGAAGGCTCCGCATCCTCCTGTTCTCCTTGGCAGTaGACTCCAGGACCATTTCAAGCTCACCTTCCATATTTCTTTTCT | + |
Preference number: 1 (lower is better) Translates to: GWPGEGSASSCSPWQ*TPGPFQAHLPYFFS Trigger: AGAAAAGAAATATGGAAGGTGAGCTTGAAATGGTCCTGGAGTCCACTGCCAAGGAGAACAGGAGGATGCGGAGCCTTCTCCAGGCCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR TCA 90 bp | TCTCCTCCAGCTTGCCCAGGCGAATGTTGCCTTTCAGGATTTTGTTaGGGACCCCATGCTTCTCGCTCTCTAAACACTGAGCCTGGAAGT | + |
Preference number: 1 (lower is better) Translates to: SPPACPGECCLSGFC*GPHASRSLNTEPGS Trigger: ACTTCCAGGCTCAGTGTTTAGAGAGCGAGAAGCATGGGGTCCTCAACAAAATCCTGAAAGGCAACATTCGCCTGGGCAAGCTGGAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR CCA 90 bp | CCAGTCTGGTTGAGGAGCATCATCCTTTCTCACCAGCTTTTGGGATaGCAGTACCTGGTCCCTGTGAGGCACAGTGTATGTAGCATCTCT | + |
Preference number: 1 (lower is better) Translates to: PVWLRSIILSHQLLG*QYLVPVRHSVCSIS Trigger: AGAGATGCTACATACACTGTGCCTCACAGGGACCAGGTACTGCCATCCCAAAAGCTGGTGAGAAAGGATGATGCTCCTCAACCAGACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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3UTR-3UTR CCA 90 bp | CATCTCTGCCATCTCCCACATCCTTCCAGGTGGACTCTGACTCCCTGCAGCTGGGATCTCTGGCGAGGCTaGGGAATGGCAACTGTCTGC | + |
Preference number: 2 (lower is better) Translates to: HLCHLPHPSRWTLTPCSWDLWRG*GMATVC Trigger: GCAGACAGTTGCCATTCCCCAGCCTCGCCAGAGATC...CCAGCTGCAGGGAGTCAGAGTCCACCTGGAAGGATGTGGGAGATGGCAGAGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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3UTR CAA 90 bp | TCCACTGCGATCTTGCTATCCAGCTGTGCCTTGAGCTCTGTGCATTaGGCCTGCAAGCTCTCCAGCTGCTCCGTGCTTTCCACGAGCTGC | + |
Preference number: 2 (lower is better) Translates to: STAILLSSCALSSVH*ACKLSSCSVLSTSC Trigger: GCAGCTCGTGGAAAGCACGGAGCAGCTGGAGAGCTTGCAGGCCAAATGCACAGAGCTCAAGGCACAGCTGGATAGCAAGATCGCAGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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3UTR-3UTR GCA 90 bp | GCTTCTTCTCTCCAGGGTGGCCTGGAGAAGGCTCCGCATCCTCCTGTTCTCCTTCCCCAGCTTCAGTGCTaGCTGCTTCTTGTACCCCTT | + |
Preference number: 2 (lower is better) Translates to: ASSLQGGLEKAPHPPVLLPQLQC*LLLVPL Trigger: AAGGGGTACAAGAAGCAGGCAGCACTGAAGCTGGGG...AAGGAGAACAGGAGGATGCGGAGCCTTCTCCAGGCCACCCTGGAGAGAAGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR-3UTR CCA 90 bp | ACGTGCTGTGTGCTTCTTCTCTCCAGGGTGGCCTGGAGAAGGCTCCGCATCCTCCTCACTGTCAGAGCTTaGGGGAATCTACCAGACCTT | + |
Preference number: 2 (lower is better) Translates to: TCCVLLLSRVAWRRLRILLTVRA*GNLPDL Trigger: AAGGTCTGGTAGATTCCCCCAAGCTCTGACAGTGAG...GAGGATGCGGAGCCTTCTCCAGGCCACCCTGGAGAGAAGAAGCACACAGCACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR-3UTR CCA 90 bp | TTTGCCGGCAAAGTCCTCCTGCTGTTCCTTCAGGCGGTGATGGATATCCCCCAGTGGAAGTCCGCCCCTTaGAGGCAACTCACTGTCAGA | + |
Preference number: 2 (lower is better) Translates to: FAGKVLLLFLQAVMDIPQWKSAP*RQLTVR Trigger: TCTGACAGTGAGTTGCCTCCAAGGGGCGGACTTCCA...CTGGGGGATATCCATCACCGCCTGAAGGAACAGCAGGAGGACTTTGCCGGCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR CAA 90 bp | CTCTCCAGGGTGGCCTGGAGAAGGCTCCGCATCCTCCTGTTCTCCTaGGCAGTGGACTCCAGGACCATTTCAAGCTCACCTTCCATATTT | + |
Preference number: 2 (lower is better) Translates to: LSRVAWRRLRILLFS*AVDSRTISSSPSIF Trigger: AAATATGGAAGGTGAGCTTGAAATGGTCCTGGAGTCCACTGCCAAGGAGAACAGGAGGATGCGGAGCCTTCTCCAGGCCACCCTGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR-3UTR GCA 90 bp | GGAGCTGTGACGTGCTGTGTGCTTCTTCTCTCCAGGGTGGCCTGGAGAAGGCTCTCCATATTTCTTTTCTaGTGCAGCGCCTCATCCAGG | + |
Preference number: 2 (lower is better) Translates to: GAVTCCVLLLSRVAWRRLSIFLF*CSASSR Trigger: CCTGGATGAGGCGCTGCAGCAGAAAAGAAATATGGA...GAGCCTTCTCCAGGCCACCCTGGAGAGAAGAAGCACACAGCACGTCACAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR CAA 90 bp | CATCTCCCACATCCTTCCAGGTGGACTCTGACTCCCTGCAGCTGGTaGACACCTGTGTTTCAGCATCTTCATCCTCCCCGTAGCCTAACA | + |
Preference number: 2 (lower is better) Translates to: HLPHPSRWTLTPCSW*TPVFQHLHPPRSLT Trigger: TGTTAGGCTACGGGGAGGATGAAGATGCTGAAACACAGGTGTCAACCAGCTGCAGGGAGTCAGAGTCCACCTGGAAGGATGTGGGAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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3UTR-3UTR GCA 90 bp | GCCTCATCCAGGACCTCCTGCTTTTCCTGCAGCATCCGATGTAGGTGCTTCACCAGCTTCAGTGCTGCCTaGTTCTTGTACCCCTTTACC | + |
Preference number: 2 (lower is better) Translates to: ASSRTSCFSCSIRCRCFTSFSAA*FLYPFT Trigger: GGTAAAGGGGTACAAGAAGCAGGCAGCACTGAAGCT...GGTGAAGCACCTACATCGGATGCTGCAGGAAAAGCAGGAGGTCCTGGATGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR-3UTR CCA 90 bp | GCCAGTCTGGTTGAGGAGCATCATCCTTTCTCACCAGCTTTTGGGATGGCAGTACCACATCCTTCCAGGTaGACTCTGACTCCCTGCAGC | + |
Preference number: 2 (lower is better) Translates to: ASLVEEHHPFSPAFGMAVPHPSR*TLTPCS Trigger: GCTGCAGGGAGTCAGAGTCCACCTGGAAGGATGTGG...TACTGCCATCCCAAAAGCTGGTGAGAAAGGATGATGCTCCTCAACCAGACTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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3UTR-3UTR GCA 90 bp | AAAGCCAGTCTGGTTGAGGAGCATCATCCTTTCTCACCAGCTTTTGGGATGGCATCATTCTGCCAGCTTTaGCGCAGCCTCAGCTCGGAA | + |
Preference number: 2 (lower is better) Translates to: KASLVEEHHPFSPAFGMASFCQL*RSLSSE Trigger: TTCCGAGCTGAGGCTGCGGCAAAGCTGGCAGAATGA...TGCCATCCCAAAAGCTGGTGAGAAAGGATGATGCTCCTCAACCAGACTGGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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3UTR-3UTR TCA 90 bp | TTGACAATTGATGTATGGACGTCCACTGCGATCTTGCTATCCAGCTGTGCCTTGTGCTTTTCCTGGCCCTaGGTCTTTGCTTCCAGGAGC | + |
Preference number: 2 (lower is better) Translates to: LTIDVWTSTAILLSSCALCFSWP*VFASRS Trigger: GCTCCTGGAAGCAAAGACTCAGGGCCAGGAAAAGCA...CAAGGCACAGCTGGATAGCAAGATCGCAGTGGACGTCCATACATCAATTGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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3UTR-3UTR GCA 90 bp | TCATTGACAATTGATGTATGGACGTCCACTGCGATCTTGCTATCCAGCTGTGCCCTGGCCCTGAGTCTTTaGTTCCAGGAGCACAAGTTG | + |
Preference number: 2 (lower is better) Translates to: SLTIDVWTSTAILLSSCALALSL*FQEHKL Trigger: CAACTTGTGCTCCTGGAAGCAAAGACTCAGGGCCAG...GGCACAGCTGGATAGCAAGATCGCAGTGGACGTCCATACATCAATTGTCAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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3UTR-3UTR CAA 90 bp | GGAGCTGTGACGTGCTGTGTGCTTCTTCTCTCCAGGGTGGCCTGGAGAAGGCTCACTCACTGTCAGAGCTaGGGGGAATCTACCAGACCT | + |
Preference number: 3 (lower is better) Translates to: GAVTCCVLLLSRVAWRRLTHCQS*GESTRP Trigger: AGGTCTGGTAGATTCCCCCAAGCTCTGACAGTGAGT...GAGCCTTCTCCAGGCCACCCTGGAGAGAAGAAGCACACAGCACGTCACAGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR TCA 72 bp | TTGCCGGCAAAGTCCTCCTGCTGTTCCTTCAGGCGGTaGTGGATATCCCCCAGCTTCAGTGCTGCCTGCTTC | + |
Preference number: 3 (lower is better) Translates to: LPAKSSCCSFRR*WISPSFSAACF Trigger: GAAGCAGGCAGCACTGAAGCTGGGGGATATCCATCACCGCCTGAAGGAACAGCAGGAGGACTTTGCCGGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR GCA 72 bp | CTATCCAGCTGTGCCTTGAGCTCTGTGCATTTGGCCTaGAAGCTCTCCAGCTGCTCCGTGCTTTCCACGAGC | + |
Preference number: 3 (lower is better) Translates to: LSSCALSSVHLA*KLSSCSVLSTS Trigger: GCTCGTGGAAAGCACGGAGCAGCTGGAGAGCTTGCAGGCCAAATGCACAGAGCTCAAGGCACAGCTGGATAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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3UTR-3UTR CAA 90 bp | CTGCTGTTCCTTCAGGCGGTGATGGATATCCCCCAGCTTCAGTGCTGCCTGCTTCTGAACGCACATGGCTaGACACAGAGAGCAGCTGTC | + |
Preference number: 3 (lower is better) Translates to: LLFLQAVMDIPQLQCCLLLNAHG*TQRAAV Trigger: GACAGCTGCTCTCTGTGTCAAGCCATGTGCGTTCAG...AAGCAGGCAGCACTGAAGCTGGGGGATATCCATCACCGCCTGAAGGAACAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR GCA 72 bp | CTTCAGGCGGTGATGGATATCCCCCAGCTTCAGTGCTaGCTGCTTCTTGTACCCCTTTACCCTCTCCTCCAG | + |
Preference number: 3 (lower is better) Translates to: LQAVMDIPQLQC*LLLVPLYPLLQ Trigger: CTGGAGGAGAGGGTAAAGGGGTACAAGAAGCAGGCAGCACTGAAGCTGGGGGATATCCATCACCGCCTGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR GCA 72 bp | GTAGGTGCTTCACCTCCTTCTGGTACTGAGCTGCTTTaGCGGCAAAGTCCTCCTGCTGTTCCTTCAGGCGGT | + |
Preference number: 3 (lower is better) Translates to: VGASPPSGTELL*RQSPPAVPSGG Trigger: ACCGCCTGAAGGAACAGCAGGAGGACTTTGCCGGCAAAGCAGCTCAGTACCAGAAGGAGGTGAAGCACCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR CCA 72 bp | GGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTaGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCC | + |
Preference number: 3 (lower is better) Translates to: GLVYFSLAYDTQ*LPRAFLSHWPS Trigger: GGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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3UTR CCA 72 bp | TGGCCTGGAGAAGGCTCCGCATCCTCCTGTTCTCCTTaGCAGTGGACTCCAGGACCATTTCAAGCTCACCTT | + |
Preference number: 3 (lower is better) Translates to: WPGEGSASSCSP*QWTPGPFQAHL Trigger: AAGGTGAGCTTGAAATGGTCCTGGAGTCCACTGCCAAGGAGAACAGGAGGATGCGGAGCCTTCTCCAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR-3UTR CAA 90 bp | TCAAGCTCACCTTCCATATTTCTTTTCTGCTGCAGCGCCTCATCCAGGACCTCCCTGGAAGTCCGCCCCTaGGAGGCAACTCACTGTCAG | + |
Preference number: 3 (lower is better) Translates to: SSSPSIFLFCCSASSRTSLEVRP*EATHCQ Trigger: CTGACAGTGAGTTGCCTCCAAGGGGCGGACTTCCAG...GGAGGTCCTGGATGAGGCGCTGCAGCAGAAAAGAAATATGGAAGGTGAGCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR-3UTR CAA 90 bp | CTTTTGGGATGGCAGTACCTGGTCCCTGTGAGGCACAGTGTATGTAGCATCTCTCTCATTCTGCCAGCTTaGCCGCAGCCTCAGCTCGGA | + |
Preference number: 3 (lower is better) Translates to: LLGWQYLVPVRHSVCSISLILPA*PQPQLG Trigger: TCCGAGCTGAGGCTGCGGCAAAGCTGGCAGAATGAG...AGAGATGCTACATACACTGTGCCTCACAGGGACCAGGTACTGCCATCCCAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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3UTR TCA 72 bp | AGCATCCGATGTAGGTGCTTCACCTCCTTCTGGTACTaGGCTGCTTTGCCGGCAAAGTCCTCCTGCTGTTCC | + |
Preference number: 3 (lower is better) Translates to: SIRCRCFTSFWY*AALPAKSSCCS Trigger: GGAACAGCAGGAGGACTTTGCCGGCAAAGCAGCTCAGTACCAGAAGGAGGTGAAGCACCTACATCGGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR TCA 72 bp | CTCACCAGCTTTTGGGATGGCAGTACCTGGTCCCTGTaGGGCACAGTGTATGTAGCATCTCTGCCATCTCCC | + |
Preference number: 3 (lower is better) Translates to: LTSFWDGSTWSL*GTVYVASLPSP Trigger: GGGAGATGGCAGAGATGCTACATACACTGTGCCTCACAGGGACCAGGTACTGCCATCCCAAAAGCTGGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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3UTR CCA 72 bp | AGACAGGAGATCTACGCCATAGATTCCCCCAGACTCTaGCGGTTGGTGGTAGCCAGAAGCTGCACATCACCA | + |
Preference number: 3 (lower is better) Translates to: RQEIYAIDSPRL*RLVVARSCTSP Trigger: TGGTGATGTGCAGCTTCTGGCTACCACCAACCGCCAGAGTCTGGGGGAATCTATGGCGTAGATCTCCTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR CCA 72 bp | CCACATCCTTCCAGGTGGACTCTGACTCCCTGCAGCTaGTTGACACCTGTGTTTCAGCATCTTCATCCTCCC | + |
Preference number: 3 (lower is better) Translates to: PHPSRWTLTPCS*LTPVFQHLHPP Trigger: GGGAGGATGAAGATGCTGAAACACAGGTGTCAACCAGCTGCAGGGAGTCAGAGTCCACCTGGAAGGATGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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3UTR-3UTR CAA 90 bp | CTGTGTGCTTCTTCTCTCCAGGGTGGCCTGGAGAAGGCTCCGCATCCTCCTGTTTTGCCTTTCAGGATTTaGTTGAGGACCCCATGCTTC | + |
Preference number: 3 (lower is better) Translates to: LCASSLQGGLEKAPHPPVLPFRI*LRTPCF Trigger: GAAGCATGGGGTCCTCAACAAAATCCTGAAAGGCAA...AACAGGAGGATGCGGAGCCTTCTCCAGGCCACCCTGGAGAGAAGAAGCACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR-3UTR CAA 90 bp | GTATGGACGTCCACTGCGATCTTGCTATCCAGCTGTGCCTTGAGCTCTGTGCATCCTGGCCCTGAGTCTTaGCTTCCAGGAGCACAAGTT | + |
Preference number: 3 (lower is better) Translates to: VWTSTAILLSSCALSSVHPGPES*LPGAQV Trigger: AACTTGTGCTCCTGGAAGCAAAGACTCAGGGCCAGG...ATGCACAGAGCTCAAGGCACAGCTGGATAGCAAGATCGCAGTGGACGTCCATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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3UTR TCA 72 bp | TGTGATGCCGGGGCTGGTTTATTTCTCCCTTGCCTATaGCACTCAGTGGCTTCCACGGGCCTTCTTGTCACA | + |
Preference number: 3 (lower is better) Translates to: CDAGAGLFLPCL*HSVASTGLLVT Trigger: TGTGACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCATCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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3UTR GCA 72 bp | TGTATGGACGTCCACTGCGATCTTGCTATCCAGCTGTaGCTTGAGCTCTGTGCATTTGGCCTGCAAGCTCTC | + |
Preference number: 3 (lower is better) Translates to: CMDVHCDLAIQL*LELCAFGLQAL Trigger: GAGAGCTTGCAGGCCAAATGCACAGAGCTCAAGGCACAGCTGGATAGCAAGATCGCAGTGGACGTCCATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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3UTR CCA 72 bp | GCTTGGGGGAATCTACCAGACCTTTCTGAACGCACATaGCTTGACACAGAGAGCAGCTGTCTTCTCCGACCA | + |
Preference number: 3 (lower is better) Translates to: AWGNLPDLSERT*LDTESSCLLRP Trigger: TGGTCGGAGAAGACAGCTGCTCTCTGTGTCAAGCCATGTGCGTTCAGAAAGGTCTGGTAGATTCCCCCAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR CCA 72 bp | GGAGAAGGCTCCGCATCCTCCTGTTCTCCTTGGCAGTaGACTCCAGGACCATTTCAAGCTCACCTTCCATAT | + |
Preference number: 3 (lower is better) Translates to: GEGSASSCSPWQ*TPGPFQAHLPY Trigger: ATATGGAAGGTGAGCTTGAAATGGTCCTGGAGTCCACTGCCAAGGAGAACAGGAGGATGCGGAGCCTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR-3UTR CAA 90 bp | ACCATTTCAAGCTCACCTTCCATATTTCTTTTCTGCTGCAGCGCCTCATCCAGGACCCTCTCCTCCAGCTaGCCCAGGCGAATGTTGCCT | + |
Preference number: 3 (lower is better) Translates to: TISSSPSIFLFCCSASSRTLSSS*PRRMLP Trigger: AGGCAACATTCGCCTGGGCAAGCTGGAGGAGAGGGT...CCTGGATGAGGCGCTGCAGCAGAAAAGAAATATGGAAGGTGAGCTTGAAATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR-3UTR CAA 90 bp | TTCTCACCAGCTTTTGGGATGGCAGTACCTGGTCCCTGTGAGGCACAGTGTATGACTCCCTGCAGCTGGTaGACACCTGTGTTTCAGCAT | + |
Preference number: 3 (lower is better) Translates to: FSPAFGMAVPGPCEAQCMTPCSW*TPVFQH Trigger: ATGCTGAAACACAGGTGTCAACCAGCTGCAGGGAGT...CATACACTGTGCCTCACAGGGACCAGGTACTGCCATCCCAAAAGCTGGTGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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3UTR TCA 72 bp | GAGGAGGAGGAGGAGGAGTCTGAAAGCCAGTCTGGTTaGGGAGCATCATCCTTTCTCACCAGCTTTTGGGAT | + |
Preference number: 3 (lower is better) Translates to: EEEEEESESQSG*GASSFLTSFWD Trigger: ATCCCAAAAGCTGGTGAGAAAGGATGATGCTCCTCAACCAGACTGGCTTTCAGACTCCTCCTCCTCCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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3UTR GCA 72 bp | CATCTCCCACATCCTTCCAGGTGGACTCTGACTCCCTaGAGCTGGTTGACACCTGTGTTTCAGCATCTTCAT | + |
Preference number: 3 (lower is better) Translates to: HLPHPSRWTLTP*SWLTPVFQHLH Trigger: ATGAAGATGCTGAAACACAGGTGTCAACCAGCTGCAGGGAGTCAGAGTCCACCTGGAAGGATGTGGGAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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3UTR TCA 72 bp | GCTTGCCCAGGCGAATGTTGCCTTTCAGGATTTTGTTaGGGACCCCATGCTTCTCGCTCTCTAAACACTGAG | + |
Preference number: 3 (lower is better) Translates to: ACPGECCLSGFC*GPHASRSLNTE Trigger: CTCAGTGTTTAGAGAGCGAGAAGCATGGGGTCCTCAACAAAATCCTGAAAGGCAACATTCGCCTGGGCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR GCA 72 bp | AGGACCATTTCAAGCTCACCTTCCATATTTCTTTTCTaGTGCAGCGCCTCATCCAGGACCTCCTGCTTTTCC | + |
Preference number: 3 (lower is better) Translates to: RTISSSPSIFLF*CSASSRTSCFS Trigger: GGAAAAGCAGGAGGTCCTGGATGAGGCGCTGCAGCAGAAAAGAAATATGGAAGGTGAGCTTGAAATGGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR CCA 72 bp | TGCAACTGGCTTTTTAGTTCATTGACAATTGATGTATaGACGTCCACTGCGATCTTGCTATCCAGCTGTGCC | + |
Preference number: 3 (lower is better) Translates to: CNWLFSSLTIDV*TSTAILLSSCA Trigger: GGCACAGCTGGATAGCAAGATCGCAGTGGACGTCCATACATCAATTGTCAATGAACTAAAAAGCCAGTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR GCA 90 bp | AGTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTCCGAGGAGGGGGTGTaGGTGGCACCGCTGGCTTCG | + |
Preference number: 4 (lower is better) Translates to: SGFHGPSCHTGPPEERRKSEEGV*VAPLAS Trigger: CGAAGCCAGCGGTGCCACGCACACCCCCTCCTCGGA...CTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | TCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGACACCGGAGCGATGCTGGCTaGGGGGAGGAAGCCATGGAT | + |
Preference number: 4 (lower is better) Translates to: STGLLVTLALLRRGGSRHRSDAG*GEEAMD Trigger: ATCCATGGCTTCCTCCCCGCAGCCAGCATCGCTCCG...GTGTCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
||
CDS-3UTR GCA 90 bp | CTGCCAGCTTTGCCGCAGCCTCAGCTCGGAAGTGGTGGCGTAAGGCTTGATGAACGGAGCGATGCTGGCTaGGGGGAGGAAGCCATGGAT | + |
Preference number: 4 (lower is better) Translates to: LPALPQPQLGSGGVRLDERSDAG*GEEAMD Trigger: ATCCATGGCTTCCTCCCCGCAGCCAGCATCGCTCCG...TTCATCAAGCCTTACGCCACCACTTCCGAGCTGAGGCTGCGGCAAAGCTGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
||
CDS-3UTR GCA 90 bp | TCCAGGACCTCCTGCTTTTCCTGCAGCATCCGATGTAGGTGCTTCACCTCCTTCTCCGAGGAGGGGGTGTaGGTGGCACCGCTGGCTTCG | + |
Preference number: 4 (lower is better) Translates to: SRTSCFSCSIRCRCFTSFSEEGV*VAPLAS Trigger: CGAAGCCAGCGGTGCCACGCACACCCCCTCCTCGGA...GAAGGAGGTGAAGCACCTACATCGGATGCTGCAGGAAAAGCAGGAGGTCCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | GCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGAGAAACGTCCTGGAGGTaGGCCTGGTGGGTGTCCCTG | + |
Preference number: 4 (lower is better) Translates to: ASTGLLVTLALLRRGGSRETSWR*AWWVSL Trigger: CAGGGACACCCACCAGGCGCACCTCCAGGACGTTTC...TCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | CCTGCTGTTCCTTCAGGCGGTGATGGATATCCCCCAGCTTCAGTGCTGCCTGCTTCTCTGGAGAAGGGTTaGGGCTCCGAGGAGGGGGTG | + |
Preference number: 4 (lower is better) Translates to: PAVPSGGDGYPPASVLPASLEKG*GSEEGV Trigger: CACCCCCTCCTCGGAGCCCCAACCCTTCTCCAGAGA...AGCAGGCAGCACTGAAGCTGGGGGATATCCATCACCGCCTGAAGGAACAGCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
||
CDS-3UTR CCA 90 bp | GCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGAAGACCTGGGCCTCTCTaGAGAAGGGTTGGGGCTCCG | + |
Preference number: 4 (lower is better) Translates to: ASTGLLVTLALLRRGGSRRPGPL*RRVGAP Trigger: CGGAGCCCCAACCCTTCTCCAGAGAGGCCCAGGTCT...TCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | GTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTGGCGAGGCTGGGGAATaGCAACTGTCTGCCCAGTCA | + |
Preference number: 4 (lower is better) Translates to: VASTGLLVTLALLRRGGSGEAGE*QLSAQS Trigger: TGACTGGGCAGACAGTTGCCATTCCCCAGCCTCGCC...ACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | TTTGCCGGCAAAGTCCTCCTGCTGTTCCTTCAGGCGGTGATGGATATCCCCCAGCGGAGCGATGCTGGCTaGGGGGAGGAAGCCATGGAT | + |
Preference number: 4 (lower is better) Translates to: FAGKVLLLFLQAVMDIPQRSDAG*GEEAMD Trigger: ATCCATGGCTTCCTCCCCGCAGCCAGCATCGCTCCG...CTGGGGGATATCCATCACCGCCTGAAGGAACAGCAGGAGGACTTTGCCGGCAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | CTGTGTGCTTCTTCTCTCCAGGGTGGCCTGGAGAAGGCTCCGCATCCTCCTGTTCAGCCAGAGCAGACCTaGGCCTCTCTGGAGAAGGGT | + |
Preference number: 4 (lower is better) Translates to: LCASSLQGGLEKAPHPPVQPEQT*ASLEKG Trigger: ACCCTTCTCCAGAGAGGCCCAGGTCTGCTCTGGCTG...AACAGGAGGATGCGGAGCCTTCTCCAGGCCACCCTGGAGAGAAGAAGCACACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | CTGCCAGCTTTGCCGCAGCCTCAGCTCGGAAGTGGTGGCGTAAGGCTTGATGAACAGCCAGAGCAGACCTaGGCCTCTCTGGAGAAGGGT | + |
Preference number: 4 (lower is better) Translates to: LPALPQPQLGSGGVRLDEQPEQT*ASLEKG Trigger: ACCCTTCTCCAGAGAGGCCCAGGTCTGCTCTGGCTG...TTCATCAAGCCTTACGCCACCACTTCCGAGCTGAGGCTGCGGCAAAGCTGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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CDS-3UTR CCA 90 bp | GGAGCTGTGACGTGCTGTGTGCTTCTTCTCTCCAGGGTGGCCTGGAGAAGGCTCGATCTCTGGCGAGGCTaGGGAATGGCAACTGTCTGC | + |
Preference number: 4 (lower is better) Translates to: GAVTCCVLLLSRVAWRRLDLWRG*GMATVC Trigger: GCAGACAGTTGCCATTCCCCAGCCTCGCCAGAGATC...GAGCCTTCTCCAGGCCACCCTGGAGAGAAGAAGCACACAGCACGTCACAGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTGGAGGTGCGCCTGGTaGGTGTCCCTGGCTTTTGCT | + |
Preference number: 4 (lower is better) Translates to: PGLVYFSLAYDTQWLPRAWRCAW*VSLAFA Trigger: AGCAAAAGCCAGGGACACCCACCAGGCGCACCTCCA...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | GTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTCGCTCAGTTCACAGCTaGGGGCTTGGTTTGCAGAGT | + |
Preference number: 4 (lower is better) Translates to: VASTGLLVTLALLRRGGSRSVHS*GLGLQS Trigger: ACTCTGCAAACCAAGCCCTCAGCTGTGAACTGAGCG...ACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | AGTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTGGACTCTGACTCCCTaGAGCTGGTTGACACCTGTG | + |
Preference number: 4 (lower is better) Translates to: SGFHGPSCHTGPPEERRKWTLTP*SWLTPV Trigger: CACAGGTGTCAACCAGCTGCAGGGAGTCAGAGTCCA...CTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | ATGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGAAACGTCCTGGAGGTaGGCCTGGTGGGTGTCCCTG | + |
Preference number: 4 (lower is better) Translates to: MPGLVYFSLAYDTQWLPRETSWR*AWWVSL Trigger: CAGGGACACCCACCAGGCGCACCTCCAGGACGTTTC...CCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | GGAGCTGTGACGTGCTGTGTGCTTCTTCTCTCCAGGGTGGCCTGGAGAAGGCTCTCTGTGCATTTGGCCTaGAAGCTCTCCAGCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: GAVTCCVLLLSRVAWRRLSVHLA*KLSSCS Trigger: GGAGCAGCTGGAGAGCTTGCAGGCCAAATGCACAGA...GAGCCTTCTCCAGGCCACCCTGGAGAGAAGAAGCACACAGCACGTCACAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | GGATGGCAGTACCTGGTCCCTGTGAGGCACAGTGTATGTAGCATCTCTGCCATCTCTCTGGAGAAGGGTTaGGGCTCCGAGGAGGGGGTG | + |
Preference number: 4 (lower is better) Translates to: GWQYLVPVRHSVCSISAISLEKG*GSEEGV Trigger: CACCCCCTCCTCGGAGCCCCAACCCTTCTCCAGAGA...GATGGCAGAGATGCTACATACACTGTGCCTCACAGGGACCAGGTACTGCCATCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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CDS-3UTR CCA 90 bp | GAGCTGCTTTGCCGGCAAAGTCCTCCTGCTGTTCCTTCAGGCGGTGATGGATATAGACCTGGGCCTCTCTaGAGAAGGGTTGGGGCTCCG | + |
Preference number: 4 (lower is better) Translates to: ELLCRQSPPAVPSGGDGYRPGPL*RRVGAP Trigger: CGGAGCCCCAACCCTTCTCCAGAGAGGCCCAGGTCT...ATATCCATCACCGCCTGAAGGAACAGCAGGAGGACTTTGCCGGCAAAGCAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCCCACATCCTTCCAGGTaGACTCTGACTCCCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: PGLVYFSLAYDTQWLPRAPHPSR*TLTPCS Trigger: GCTGCAGGGAGTCAGAGTCCACCTGGAAGGATGTGG...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | GCTTCTTCTCTCCAGGGTGGCCTGGAGAAGGCTCCGCATCCTCCTGTTCTCCTTCCACATCCTTCCAGGTaGACTCTGACTCCCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: ASSLQGGLEKAPHPPVLLPHPSR*TLTPCS Trigger: GCTGCAGGGAGTCAGAGTCCACCTGGAAGGATGTGG...AAGGAGAACAGGAGGATGCGGAGCCTTCTCCAGGCCACCCTGGAGAGAAGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCGTGGTGTGGGGCCCTTaGATGGGAGGCCTTGGATAT | + |
Preference number: 4 (lower is better) Translates to: PGLVYFSLAYDTQWLPRAVVWGP*MGGLGY Trigger: ATATCCAAGGCCTCCCATCCAAGGGCCCCACACCAC...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | GCGCCTCATCCAGGACCTCCTGCTTTTCCTGCAGCATCCGATGTAGGTGCTTCAATCCACCAACCAGGGTaGTGTGGGGCCCTTGGATGG | + |
Preference number: 4 (lower is better) Translates to: APHPGPPAFPAASDVGASIHQPG*CGALGW Trigger: CCATCCAAGGGCCCCACACCACCCTGGTTGGTGGAT...TGAAGCACCTACATCGGATGCTGCAGGAAAAGCAGGAGGTCCTGGATGAGGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCGGTGTGACTCCTTCCTaGCAGGAAGCCTTTTCCGTC | + |
Preference number: 4 (lower is better) Translates to: PGLVYFSLAYDTQWLPRAGVTPS*QEAFSV Trigger: GACGGAAAAGGCTTCCTGTCAGGAAGGAGTCACACC...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | GCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGACCTCCAGGGCGGTGCTaGGTTTGTCCTTCTCTTTCA | + |
Preference number: 4 (lower is better) Translates to: ASTGLLVTLALLRRGGSRPPGRC*VCPSLS Trigger: TGAAAGAGAAGGACAAACTCAGCACCGCCCTGGAGG...TCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTGCTTTTCCTGGCCCTaGGTCTTTGCTTCCAGGAGC | + |
Preference number: 4 (lower is better) Translates to: PGLVYFSLAYDTQWLPRACFSWP*VFASRS Trigger: GCTCCTGGAAGCAAAGACTCAGGGCCAGGAAAAGCA...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | TCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGACACTTTGCCAGGTACTGGTaGGCAGACATCTCCTTCCCC | + |
Preference number: 4 (lower is better) Translates to: STGLLVTLALLRRGGSRHFARYW*ADISFP Trigger: GGGGAAGGAGATGTCTGCTCACCAGTACCTGGCAAA...GTGTCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS-3UTR TCA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTTGCCAGGTACTGGTaGGCAGACATCTCCTTCCCC | + |
Preference number: 4 (lower is better) Translates to: PGLVYFSLAYDTQWLPRAFARYW*ADISFP Trigger: GGGGAAGGAGATGTCTGCTCACCAGTACCTGGCAAA...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS-3UTR GCA 90 bp | AGTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGCTGGCCCTGAGTCTTTaGTTCCAGGAGCACAAGTTG | + |
Preference number: 4 (lower is better) Translates to: SGFHGPSCHTGPPEERRKLALSL*FQEHKL Trigger: CAACTTGTGCTCCTGGAAGCAAAGACTCAGGGCCAG...CTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTCTGTGCATTTGGCCTaGAAGCTCTCCAGCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: PGLVYFSLAYDTQWLPRASVHLA*KLSSCS Trigger: GGAGCAGCTGGAGAGCTTGCAGGCCAAATGCACAGA...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | TCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGACACCAAGCCCACCAGGTTTaGCAGGTACTGGTGAGCAGA | + |
Preference number: 4 (lower is better) Translates to: STGLLVTLALLRRGGSRHQAHQV*QVLVSR Trigger: TCTGCTCACCAGTACCTGGCAAACCTGGTGGGCTTG...GTGTCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS-3UTR GCA 90 bp | GCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGAGGTACTGAGCTGCTTTaGCGGCAAAGTCCTCCTGCT | + |
Preference number: 4 (lower is better) Translates to: ASTGLLVTLALLRRGGSRGTELL*RQSPPA Trigger: AGCAGGAGGACTTTGCCGGCAAAGCAGCTCAGTACC...TCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000150421.2 |
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CDS-3UTR GCA 90 bp | AGTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGACCTCCTGCTTTTCCTaGAGCATCCGATGTAGGTGC | + |
Preference number: 4 (lower is better) Translates to: SGFHGPSCHTGPPEERRKTSCFS*SIRCRC Trigger: GCACCTACATCGGATGCTGCAGGAAAAGCAGGAGGT...CTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000150421.2 |
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CDS-3UTR GCA 90 bp | TCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGACACCCCCAGCTTCAGTGCTaGCTGCTTCTTGTACCCCAA | + |
Preference number: 4 (lower is better) Translates to: STGLLVTLALLRRGGSRHPQLQC*LLLVPQ Trigger: TTGGGGTACAAGAAGCAGGCAGCACTGAAGCTGGGG...GTGTCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150421.2 |
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CDS-3UTR CCA 90 bp | GTGAGGCACAGTGTATGTAGCATCTCTGCCATCTCCCACATCCTTCCAGGTGGAAGACCTGGGCCTCTCTaGAGAAGGGTTGGGGCTCCG | + |
Preference number: 4 (lower is better) Translates to: VRHSVCSISAISHILPGGRPGPL*RRVGAP Trigger: CGGAGCCCCAACCCTTCTCCAGAGAGGCCCAGGTCT...TCCACCTGGAAGGATGTGGGAGATGGCAGAGATGCTACATACACTGTGCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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CDS-3UTR CCA 90 bp | ATGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGCAGCCAGAGCAGACCTaGGCCTCTCTGGAGAAGGGT | + |
Preference number: 4 (lower is better) Translates to: MPGLVYFSLAYDTQWLPRQPEQT*ASLEKG Trigger: ACCCTTCTCCAGAGAGGCCCAGGTCTGCTCTGGCTG...CCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | ATGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGACGTGGTTGCCAGGATaGCTGCAGCCAGAGCAGACC | + |
Preference number: 4 (lower is better) Translates to: MPGLVYFSLAYDTQWLPRTWLPG*LQPEQT Trigger: GGTCTGCTCTGGCTGCAGCCATCCTGGCAACCACGT...CCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | AGTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTCTACCAGCTACATCTaGGGAGGGAGGAGGCTTTTC | + |
Preference number: 4 (lower is better) Translates to: SGFHGPSCHTGPPEERRKSTSYI*GGRRLF Trigger: GAAAAGCCTCCTCCCTCCCCAGATGTAGCTGGTAGA...CTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | CCTGGAGAAGGCTCCGCATCCTCCTGTTCTCCTTGGCAGTGGACTCCAGGACCATCTACCAGCTACATCTaGGGAGGGAGGAGGCTTTTC | + |
Preference number: 4 (lower is better) Translates to: PGEGSASSCSPWQWTPGPSTSYI*GGRRLF Trigger: GAAAAGCCTCCTCCCTCCCCAGATGTAGCTGGTAGA...TGGTCCTGGAGTCCACTGCCAAGGAGAACAGGAGGATGCGGAGCCTTCTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | GGAGCTGTGACGTGCTGTGTGCTTCTTCTCTCCAGGGTGGCCTGGAGAAGGCTCGGGAGGCCTTGGATATaGGAACTCTCTTCCTCAGAC | + |
Preference number: 4 (lower is better) Translates to: GAVTCCVLLLSRVAWRRLGRPWI*ELSSSD Trigger: GTCTGAGGAAGAGAGTTCCCATATCCAAGGCCTCCC...GAGCCTTCTCCAGGCCACCCTGGAGAGAAGAAGCACACAGCACGTCACAGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | TTGAGCTCTGTGCATTTGGCCTGCAAGCTCTCCAGCTGCTCCGTGCTTTCCACGGTGGTGTGGGGCCCTTaGATGGGAGGCCTTGGATAT | + |
Preference number: 4 (lower is better) Translates to: LSSVHLACKLSSCSVLSTVVWGP*MGGLGY Trigger: ATATCCAAGGCCTCCCATCCAAGGGCCCCACACCAC...CGTGGAAAGCACGGAGCAGCTGGAGAGCTTGCAGGCCAAATGCACAGAGCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR CCA 90 bp | GTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTCCTGGTGGGTGTCCCTaGCTTTTGCTTGCTGAATCT | + |
Preference number: 4 (lower is better) Translates to: VASTGLLVTLALLRRGGSPGGCP*LLLAES Trigger: AGATTCAGCAAGCAAAAGCCAGGGACACCCACCAGG...ACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | CATCCAGGACCTCCTGCTTTTCCTGCAGCATCCGATGTAGGTGCTTCACCTCCTTGGAGGTGCGCCTGGTaGGTGTCCCTGGCTTTTGCT | + |
Preference number: 4 (lower is better) Translates to: HPGPPAFPAASDVGASPPWRCAW*VSLAFA Trigger: AGCAAAAGCCAGGGACACCCACCAGGCGCACCTCCA...AGGAGGTGAAGCACCTACATCGGATGCTGCAGGAAAAGCAGGAGGTCCTGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
||
CDS-3UTR CCA 90 bp | CGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTCTAGCGCTCTGTTCCTaGTGGCCCAGCTGCTCTTCT | + |
Preference number: 4 (lower is better) Translates to: RGWFISPLPMTLSGFHGPLALCS*WPSCSS Trigger: AGAAGAGCAGCTGGGCCACCAGGAACAGAGCGCTAG...AGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
||
CDS-3UTR CCA 90 bp | TCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGACACTCCTCCTGTTCTCCTTaGCAGTGGACTCCAGGACCA | + |
Preference number: 4 (lower is better) Translates to: STGLLVTLALLRRGGSRHSSCSP*QWTPGP Trigger: TGGTCCTGGAGTCCACTGCCAAGGAGAACAGGAGGA...GTGTCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000150421.2 |
||
CDS-3UTR TCA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCAGTACCTGGTCCCTGTaGGGCACAGTGTATGTAGCA | + |
Preference number: 4 (lower is better) Translates to: PGLVYFSLAYDTQWLPRASTWSL*GTVYVA Trigger: TGCTACATACACTGTGCCTCACAGGGACCAGGTACT...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
||
CDS-3UTR TCA 90 bp | ATGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGGAGGAGGAGGAGTCTaGAAGCCAGTCTGGTTGAGG | + |
Preference number: 4 (lower is better) Translates to: MPGLVYFSLAYDTQWLPRGGGGV*KPVWLR Trigger: CCTCAACCAGACTGGCTTTCAGACTCCTCCTCCTCC...CCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | TGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGGGAATGGCAACTGTCTaGCCAGTCAACGTGGTTGCC | + |
Preference number: 4 (lower is better) Translates to: CRGWFISPLPMTLSGFHGGMATV*PVNVVA Trigger: GGCAACCACGTTGACTGGGCAGACAGTTGCCATTCC...CCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | GCGCCTCATCCAGGACCTCCTGCTTTTCCTGCAGCATCCGATGTAGGTGCTTCATCATTCTGCCAGCTTTaGCGCAGCCTCAGCTCGGAA | + |
Preference number: 4 (lower is better) Translates to: APHPGPPAFPAASDVGASSFCQL*RSLSSE Trigger: TTCCGAGCTGAGGCTGCGGCAAAGCTGGCAGAATGA...TGAAGCACCTACATCGGATGCTGCAGGAAAAGCAGGAGGTCCTGGATGAGGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | TGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGTGGACTCTGACTCCCTaGAGCTGGTTGACACCTGTG | + |
Preference number: 4 (lower is better) Translates to: CRGWFISPLPMTLSGFHGWTLTP*SWLTPV Trigger: CACAGGTGTCAACCAGCTGCAGGGAGTCAGAGTCCA...CCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
||
CDS-3UTR GCA 90 bp | CTTCTTCTCTCCAGGGTGGCCTGGAGAAGGCTCCGCATCCTCCTGTTCTCCTTGCTGGCCCTGAGTCTTTaGTTCCAGGAGCACAAGTTG | + |
Preference number: 4 (lower is better) Translates to: LLLSRVAWRRLRILLFSLLALSL*FQEHKL Trigger: CAACTTGTGCTCCTGGAAGCAAAGACTCAGGGCCAG...CAAGGAGAACAGGAGGATGCGGAGCCTTCTCCAGGCCACCCTGGAGAGAAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | CGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTCAAGCCCACCAGGTTTaGCAGGTACTGGTGAGCAGA | + |
Preference number: 4 (lower is better) Translates to: RGWFISPLPMTLSGFHGPQAHQV*QVLVSR Trigger: TCTGCTCACCAGTACCTGGCAAACCTGGTGGGCTTG...AGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS-3UTR GCA 90 bp | CGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTGGTACTGAGCTGCTTTaGCGGCAAAGTCCTCCTGCT | + |
Preference number: 4 (lower is better) Translates to: RGWFISPLPMTLSGFHGPGTELL*RQSPPA Trigger: AGCAGGAGGACTTTGCCGGCAAAGCAGCTCAGTACC...AGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000150421.2 |
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CDS-3UTR GCA 90 bp | GTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTGGTTCTTGCTGGCTGTaGGCTTCTCCAGCATCAAAT | + |
Preference number: 4 (lower is better) Translates to: VASTGLLVTLALLRRGGSGSCWL*ASPASN Trigger: ATTTGATGCTGGAGAAGCGCACAGCCAGCAAGAACC...ACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | TTTGCCGGCAAAGTCCTCCTGCTGTTCCTTCAGGCGGTGATGGATATCCCCCAGGCGGGGAGGAAGCCATaGATGATGTGGTTGAACTGG | + |
Preference number: 4 (lower is better) Translates to: FAGKVLLLFLQAVMDIPQAGRKP*MMWLNW Trigger: CCAGTTCAACCACATCATCCATGGCTTCCTCCCCGC...CTGGGGGATATCCATCACCGCCTGAAGGAACAGCAGGAGGACTTTGCCGGCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTTGTGCGTGGCACCGCTaGCTTCGGAGCGATGCTGGC | + |
Preference number: 4 (lower is better) Translates to: WFISPLPMTLSGFHGPSCCAWHR*LRSDAG Trigger: GCCAGCATCGCTCCGAAGCCAGCGGTGCCACGCACA...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | CTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTCTCTGGAGAAGGGTTaGGGCTCCGAGGAGGGGGTG | + |
Preference number: 4 (lower is better) Translates to: LVYFSLAYDTQWLPRAFLSLEKG*GSEEGV Trigger: CACCCCCTCCTCGGAGCCCCAACCCTTCTCCAGAGA...CAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | GGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTACGTGGTTGCCAGGATaGCTGCAGCCAGAGCAGACC | + |
Preference number: 4 (lower is better) Translates to: GWFISPLPMTLSGFHGPSTWLPG*LQPEQT Trigger: GGTCTGCTCTGGCTGCAGCCATCCTGGCAACCACGT...AGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | ATGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGTGTGGGGCCCTTGGATaGGAGGCCTTGGATATGGGA | + |
Preference number: 4 (lower is better) Translates to: MPGLVYFSLAYDTQWLPRCGALG*EALDMG Trigger: TCCCATATCCAAGGCCTCCCATCCAAGGGCCCCACA...CCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | TCCAGGACCTCCTGCTTTTCCTGCAGCATCCGATGTAGGTGCTTCACCTCCTTCTGTGGGGCCCTTGGATaGGAGGCCTTGGATATGGGA | + |
Preference number: 4 (lower is better) Translates to: SRTSCFSCSIRCRCFTSFCGALG*EALDMG Trigger: TCCCATATCCAAGGCCTCCCATCCAAGGGCCCCACA...GAAGGAGGTGAAGCACCTACATCGGATGCTGCAGGAAAAGCAGGAGGTCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | TGTATGGACGTCCACTGCGATCTTGCTATCCAGCTGTGCCTTGAGCTCTGTGCAATCCACCAACCAGGGTaGTGTGGGGCCCTTGGATGG | + |
Preference number: 4 (lower is better) Translates to: CMDVHCDLAIQLCLELCAIHQPG*CGALGW Trigger: CCATCCAAGGGCCCCACACCACCCTGGTTGGTGGAT...TGCACAGAGCTCAAGGCACAGCTGGATAGCAAGATCGCAGTGGACGTCCATACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR CCA 90 bp | TGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGTCCTCCTGTTCTCCTTaGCAGTGGACTCCAGGACCA | + |
Preference number: 4 (lower is better) Translates to: CRGWFISPLPMTLSGFHGSSCSP*QWTPGP Trigger: TGGTCCTGGAGTCCACTGCCAAGGAGAACAGGAGGA...CCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079414.12 |
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CDS-3UTR TCA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCGAAAGCCAGTCTGGTTaGGGAGCATCATCCTTTCTC | + |
Preference number: 4 (lower is better) Translates to: PGLVYFSLAYDTQWLPRAESQSG*GASSFL Trigger: GAGAAAGGATGATGCTCCTCAACCAGACTGGCTTTC...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | TCCAGGACCTCCTGCTTTTCCTGCAGCATCCGATGTAGGTGCTTCACCTCCTTCTTTGCCAGGTACTGGTaGGCAGACATCTCCTTCCCC | + |
Preference number: 4 (lower is better) Translates to: SRTSCFSCSIRCRCFTSFFARYW*ADISFP Trigger: GGGGAAGGAGATGTCTGCTCACCAGTACCTGGCAAA...GAAGGAGGTGAAGCACCTACATCGGATGCTGCAGGAAAAGCAGGAGGTCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | ATGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGGAATGGCAACTGTCTaGCCAGTCAACGTGGTTGCC | + |
Preference number: 4 (lower is better) Translates to: MPGLVYFSLAYDTQWLPRGMATV*PVNVVA Trigger: GGCAACCACGTTGACTGGGCAGACAGTTGCCATTCC...CCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCGGTGTCCCTGGCTTTTaGTTGCTGAATCTCCAACTG | + |
Preference number: 4 (lower is better) Translates to: PGLVYFSLAYDTQWLPRAGVPGF*LLNLQL Trigger: CAGTTGGAGATTCAGCAAGCAAAAGCCAGGGACACC...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | ATGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGCAAGCCCACCAGGTTTaGCAGGTACTGGTGAGCAGA | + |
Preference number: 4 (lower is better) Translates to: MPGLVYFSLAYDTQWLPRQAHQV*QVLVSR Trigger: TCTGCTCACCAGTACCTGGCAAACCTGGTGGGCTTG...CCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | GCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGAAGCTTCAGTGCTGCCTaGTTCTTGTACCCCTTTACC | + |
Preference number: 4 (lower is better) Translates to: ASTGLLVTLALLRRGGSRSFSAA*FLYPFT Trigger: GGTAAAGGGGTACAAGAAGCAGGCAGCACTGAAGCT...TCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079414.12 |
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CDS-3UTR CCA 90 bp | ATGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGAAGCCATGGATGATGTaGTTGAACTGGCTCCGGCGG | + |
Preference number: 4 (lower is better) Translates to: MPGLVYFSLAYDTQWLPRKPWMM*LNWLRR Trigger: CCGCCGGAGCCAGTTCAACCACATCATCCATGGCTT...CCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | GCCAGTCTGGTTGAGGAGCATCATCCTTTCTCACCAGCTTTTGGGATGGCAGTAACGTGGTTGCCAGGATaGCTGCAGCCAGAGCAGACC | + |
Preference number: 4 (lower is better) Translates to: ASLVEEHHPFSPAFGMAVTWLPG*LQPEQT Trigger: GGTCTGCTCTGGCTGCAGCCATCCTGGCAACCACGT...TACTGCCATCCCAAAAGCTGGTGAGAAAGGATGATGCTCCTCAACCAGACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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CDS-3UTR CCA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTGGATGGGAGGCCTTaGATATGGGAACTCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: PGLVYFSLAYDTQWLPRALDGRP*IWELSS Trigger: GGAAGAGAGTTCCCATATCCAAGGCCTCCCATCCAA...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | AGCTCTGTGCATTTGGCCTGCAAGCTCTCCAGCTGCTCCGTGCTTTCCACGAGCTTGGATGGGAGGCCTTaGATATGGGAACTCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: SSVHLACKLSSCSVLSTSLDGRP*IWELSS Trigger: GGAAGAGAGTTCCCATATCCAAGGCCTCCCATCCAA...GCTCGTGGAAAGCACGGAGCAGCTGGAGAGCTTGCAGGCCAAATGCACAGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR CCA 90 bp | TGTATGGACGTCCACTGCGATCTTGCTATCCAGCTGTGCCTTGAGCTCTGTGCATGTGGGGCCCTTGGATaGGAGGCCTTGGATATGGGA | + |
Preference number: 4 (lower is better) Translates to: CMDVHCDLAIQLCLELCACGALG*EALDMG Trigger: TCCCATATCCAAGGCCTCCCATCCAAGGGCCCCACA...TGCACAGAGCTCAAGGCACAGCTGGATAGCAAGATCGCAGTGGACGTCCATACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR CCA 90 bp | CTGCTGTTCCTTCAGGCGGTGATGGATATCCCCCAGCTTCAGTGCTGCCTGCTTCCTGGTGGGTGTCCCTaGCTTTTGCTTGCTGAATCT | + |
Preference number: 4 (lower is better) Translates to: LLFLQAVMDIPQLQCCLLPGGCP*LLLAES Trigger: AGATTCAGCAAGCAAAAGCCAGGGACACCCACCAGG...AAGCAGGCAGCACTGAAGCTGGGGGATATCCATCACCGCCTGAAGGAACAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | CTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTCCTGGAGGTGCGCCTaGTGGGTGTCCCTGGCTTTT | + |
Preference number: 4 (lower is better) Translates to: LVYFSLAYDTQWLPRAFLSWRCA*WVSLAF Trigger: AAAAGCCAGGGACACCCACCAGGCGCACCTCCAGGA...CAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | AGTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTGTTCTCCTTGGCAGTaGACTCCAGGACCATTTCAA | + |
Preference number: 4 (lower is better) Translates to: SGFHGPSCHTGPPEERRKCSPWQ*TPGPFQ Trigger: TTGAAATGGTCCTGGAGTCCACTGCCAAGGAGAACA...CTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000150421.2 |
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3UTR CAA 72 bp | ATCTTGCTATCCAGCTGTGCCTTGAGCTCTGTGCATTaGGCCTGCAAGCTCTCCAGCTGCTCCGTGCTTTCC | + |
Preference number: 4 (lower is better) Translates to: ILLSSCALSSVH*ACKLSSCSVLS Trigger: GGAAAGCACGGAGCAGCTGGAGAGCTTGCAGGCCAAATGCACAGAGCTCAAGGCACAGCTGGATAGCAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR TCA 90 bp | CCCAGGCGAATGTTGCCTTTCAGGATTTTGTTGAGGACCCCATGCTTCTCGCTCCGCTCAGTTCACAGCTaGGGGCTTGGTTTGCAGAGT | + |
Preference number: 4 (lower is better) Translates to: PRRMLPFRILLRTPCFSLRSVHS*GLGLQS Trigger: ACTCTGCAAACCAAGCCCTCAGCTGTGAACTGAGCG...GAGCGAGAAGCATGGGGTCCTCAACAAAATCCTGAAAGGCAACATTCGCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | GCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGAAAAGCAATTCAGGTGTaGCTCCTTCCTGACAGGAAG | + |
Preference number: 4 (lower is better) Translates to: ASTGLLVTLALLRRGGSRKAIQV*LLPDRK Trigger: CTTCCTGTCAGGAAGGAGTCACACCTGAATTGCTTT...TCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | GGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTCCTCCAGGGCGGTGCTaGGTTTGTCCTTCTCTTTCA | + |
Preference number: 4 (lower is better) Translates to: GWFISPLPMTLSGFHGPSPPGRC*VCPSLS Trigger: TGAAAGAGAAGGACAAACTCAGCACCGCCCTGGAGG...AGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | GGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTCATTCTGCCAGCTTTaGCGCAGCCTCAGCTCGGAA | + |
Preference number: 4 (lower is better) Translates to: GWFISPLPMTLSGFHGPSSFCQL*RSLSSE Trigger: TTCCGAGCTGAGGCTGCGGCAAAGCTGGCAGAATGA...AGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | CTGTGTGCTTCTTCTCTCCAGGGTGGCCTGGAGAAGGCTCCGCATCCTCCTGTTCTTGCTATCCAGCTGTaGCTTGAGCTCTGTGCATTT | + |
Preference number: 4 (lower is better) Translates to: LCASSLQGGLEKAPHPPVLAIQL*LELCAF Trigger: AAATGCACAGAGCTCAAGGCACAGCTGGATAGCAAG...AACAGGAGGATGCGGAGCCTTCTCCAGGCCACCCTGGAGAGAAGAAGCACACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTTCCTGGTGGCCCAGCTaGTCTTCTCCAGAAGCAGGC | + |
Preference number: 4 (lower is better) Translates to: WFISPLPMTLSGFHGPSCSWWPS*SSPEAG Trigger: GCCTGCTTCTGGAGAAGAGCAGCTGGGCCACCAGGA...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTGTTGAGGACCCCATaGTTCTCGCTCTCTAAACAC | + |
Preference number: 4 (lower is better) Translates to: PGLVYFSLAYDTQWLPRALLRTP*FSLSKH Trigger: GTGTTTAGAGAGCGAGAAGCATGGGGTCCTCAACAA...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079414.12 |
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CDS-3UTR GCA 90 bp | GCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGATCCATATTTCTTTTCTaGTGCAGCGCCTCATCCAGG | + |
Preference number: 4 (lower is better) Translates to: ASTGLLVTLALLRRGGSRSIFLF*CSASSR Trigger: CCTGGATGAGGCGCTGCAGCAGAAAAGAAATATGGA...TCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000150421.2 |
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CDS-3UTR GCA 90 bp | TCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGACACTCCATATTTCTTTTCTaGTGCAGCGCCTCATCCAGG | + |
Preference number: 4 (lower is better) Translates to: STGLLVTLALLRRGGSRHSIFLF*CSASSR Trigger: CCTGGATGAGGCGCTGCAGCAGAAAAGAAATATGGA...GTGTCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000150421.2 |
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CDS-3UTR CCA 90 bp | GGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTGCGGGGAGGAAGCCATaGATGATGTGGTTGAACTGG | + |
Preference number: 4 (lower is better) Translates to: GWFISPLPMTLSGFHGPSAGRKP*MMWLNW Trigger: CCAGTTCAACCACATCATCCATGGCTTCCTCCCCGC...AGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTGGCGAGGCTGGGGAATaGCAACTGTCTGCCCAGTCA | + |
Preference number: 4 (lower is better) Translates to: WFISPLPMTLSGFHGPSCGEAGE*QLSAQS Trigger: TGACTGGGCAGACAGTTGCCATTCCCCAGCCTCGCC...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
||
CDS-3UTR CCA 90 bp | ATGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGGGAGGCCTTGGATATaGGAACTCTCTTCCTCAGAC | + |
Preference number: 4 (lower is better) Translates to: MPGLVYFSLAYDTQWLPRGRPWI*ELSSSD Trigger: GTCTGAGGAAGAGAGTTCCCATATCCAAGGCCTCCC...CCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTATCCACCAACCAGGGTaGTGTGGGGCCCTTGGATGG | + |
Preference number: 4 (lower is better) Translates to: WFISPLPMTLSGFHGPSCIHQPG*CGALGW Trigger: CCATCCAAGGGCCCCACACCACCCTGGTTGGTGGAT...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | TCAAGCTCACCTTCCATATTTCTTTTCTGCTGCAGCGCCTCATCCAGGACCTCCGGTGTGACTCCTTCCTaGCAGGAAGCCTTTTCCGTC | + |
Preference number: 4 (lower is better) Translates to: SSSPSIFLFCCSASSRTSGVTPS*QEAFSV Trigger: GACGGAAAAGGCTTCCTGTCAGGAAGGAGTCACACC...GGAGGTCCTGGATGAGGCGCTGCAGCAGAAAAGAAATATGGAAGGTGAGCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | ATGGACGTCCACTGCGATCTTGCTATCCAGCTGTGCCTTGAGCTCTGTGCATTTGGTGTGACTCCTTCCTaGCAGGAAGCCTTTTCCGTC | + |
Preference number: 4 (lower is better) Translates to: MDVHCDLAIQLCLELCAFGVTPS*QEAFSV Trigger: GACGGAAAAGGCTTCCTGTCAGGAAGGAGTCACACC...AAATGCACAGAGCTCAAGGCACAGCTGGATAGCAAGATCGCAGTGGACGTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR TCA 90 bp | TTGAGCTCTGTGCATTTGGCCTGCAAGCTCTCCAGCTGCTCCGTGCTTTCCACGAAAGCAATTCAGGTGTaGCTCCTTCCTGACAGGAAG | + |
Preference number: 4 (lower is better) Translates to: LSSVHLACKLSSCSVLSTKAIQV*LLPDRK Trigger: CTTCCTGTCAGGAAGGAGTCACACCTGAATTGCTTT...CGTGGAAAGCACGGAGCAGCTGGAGAGCTTGCAGGCCAAATGCACAGAGCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR TCA 90 bp | GGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTATCCAGCTGTGCCTTaGGCTCTGTGCATTTGGCCT | + |
Preference number: 4 (lower is better) Translates to: GWFISPLPMTLSGFHGPSYPAVP*ALCIWP Trigger: AGGCCAAATGCACAGAGCTCAAGGCACAGCTGGATA...AGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | GGACCATTTCAAGCTCACCTTCCATATTTCTTTTCTGCTGCAGCGCCTCATCCATCCTGGTGGCCCAGCTaGTCTTCTCCAGAAGCAGGC | + |
Preference number: 4 (lower is better) Translates to: GPFQAHLPYFFSAAAPHPSWWPS*SSPEAG Trigger: GCCTGCTTCTGGAGAAGAGCAGCTGGGCCACCAGGA...TGGATGAGGCGCTGCAGCAGAAAAGAAATATGGAAGGTGAGCTTGAAATGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | GGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTACCTCCTGCTTTTCCTaGAGCATCCGATGTAGGTGC | + |
Preference number: 4 (lower is better) Translates to: GWFISPLPMTLSGFHGPSTSCFS*SIRCRC Trigger: GCACCTACATCGGATGCTGCAGGAAAAGCAGGAGGT...AGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000150421.2 |
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CDS-3UTR CCA 90 bp | CTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGAAGCCATGGATGATGTaGTTGAACTGGCTCCGGCGG | + |
Preference number: 4 (lower is better) Translates to: LVYFSLAYDTQWLPRAFLKPWMM*LNWLRR Trigger: CCGCCGGAGCCAGTTCAACCACATCATCCATGGCTT...CAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTGATCTCTGGCGAGGCTaGGGAATGGCAACTGTCTGC | + |
Preference number: 4 (lower is better) Translates to: WFISPLPMTLSGFHGPSCDLWRG*GMATVC Trigger: GCAGACAGTTGCCATTCCCCAGCCTCGCCAGAGATC...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | CTGCTGTTCCTTCAGGCGGTGATGGATATCCCCCAGCTTCAGTGCTGCCTGCTTTCATCCACCAGGTCTTaGCTTTGCTTCCTTAGGCAA | + |
Preference number: 4 (lower is better) Translates to: LLFLQAVMDIPQLQCCLLSSTRS*LCFLRQ Trigger: TTGCCTAAGGAAGCAAAGCCAAGACCTGGTGGATGA...AAGCAGGCAGCACTGAAGCTGGGGGATATCCATCACCGCCTGAAGGAACAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | GGACCATTTCAAGCTCACCTTCCATATTTCTTTTCTGCTGCAGCGCCTCATCCATCCTGGAGGTGCGCCTaGTGGGTGTCCCTGGCTTTT | + |
Preference number: 4 (lower is better) Translates to: GPFQAHLPYFFSAAAPHPSWRCA*WVSLAF Trigger: AAAAGCCAGGGACACCCACCAGGCGCACCTCCAGGA...TGGATGAGGCGCTGCAGCAGAAAAGAAATATGGAAGGTGAGCTTGAAATGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTCTAGCGCTCTGTTCCTaGTGGCCCAGCTGCTCTTCT | + |
Preference number: 4 (lower is better) Translates to: WFISPLPMTLSGFHGPSCLALCS*WPSCSS Trigger: AGAAGAGCAGCTGGGCCACCAGGAACAGAGCGCTAG...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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3UTR CAA 72 bp | GCCTGCTTCTTGTACCCCTTTACCCTCTCCTCCAGCTaGCCCAGGCGAATGTTGCCTTTCAGGATTTTGTTG | + |
Preference number: 4 (lower is better) Translates to: ACFLYPFTLSSS*PRRMLPFRILL Trigger: CAACAAAATCCTGAAAGGCAACATTCGCCTGGGCAAGCTGGAGGAGAGGGTAAAGGGGTACAAGAAGCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | GGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTGAAAGCCAGTCTGGTTaGGGAGCATCATCCTTTCTC | + |
Preference number: 4 (lower is better) Translates to: GWFISPLPMTLSGFHGPSESQSG*GASSFL Trigger: GAGAAAGGATGATGCTCCTCAACCAGACTGGCTTTC...AGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | CGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTTAACATCTTTCTGCTaGGTGTGCTGTGGTGTTGAG | + |
Preference number: 4 (lower is better) Translates to: RGWFISPLPMTLSGFHGPLTSFC*VCCGVE Trigger: CTCAACACCACAGCACACTCAGCAGAAAGATGTTAA...AGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | TGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGTTAACATCTTTCTGCTaGGTGTGCTGTGGTGTTGAG | + |
Preference number: 4 (lower is better) Translates to: CRGWFISPLPMTLSGFHGLTSFC*VCCGVE Trigger: CTCAACACCACAGCACACTCAGCAGAAAGATGTTAA...CCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | CGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTAGCCAGCAACAGTGGTaGGAGATACTTTATATCCAC | + |
Preference number: 4 (lower is better) Translates to: RGWFISPLPMTLSGFHGPSQQQW*EILYIH Trigger: GTGGATATAAAGTATCTCTCACCACTGTTGCTGGCT...AGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | TCAAGCTCACCTTCCATATTTCTTTTCTGCTGCAGCGCCTCATCCAGGACCTCCTATCCAGCTGTGCCTTaGGCTCTGTGCATTTGGCCT | + |
Preference number: 4 (lower is better) Translates to: SSSPSIFLFCCSASSRTSYPAVP*ALCIWP Trigger: AGGCCAAATGCACAGAGCTCAAGGCACAGCTGGATA...GGAGGTCCTGGATGAGGCGCTGCAGCAGAAAAGAAATATGGAAGGTGAGCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTCCCCAGCTTCAGTGCTaGCTGCTTCTTGTACCCCTT | + |
Preference number: 4 (lower is better) Translates to: WFISPLPMTLSGFHGPSCPQLQC*LLLVPL Trigger: AAGGGGTACAAGAAGCAGGCAGCACTGAAGCTGGGG...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079414.12 |
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CDS-3UTR CCA 90 bp | GTCCACTGCGATCTTGCTATCCAGCTGTGCCTTGAGCTCTGTGCATTTGGCCTGTCATCCACCAGGTCTTaGCTTTGCTTCCTTAGGCAA | + |
Preference number: 4 (lower is better) Translates to: VHCDLAIQLCLELCAFGLSSTRS*LCFLRQ Trigger: TTGCCTAAGGAAGCAAAGCCAAGACCTGGTGGATGA...CAGGCCAAATGCACAGAGCTCAAGGCACAGCTGGATAGCAAGATCGCAGTGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR CCA 90 bp | ATGGACGTCCACTGCGATCTTGCTATCCAGCTGTGCCTTGAGCTCTGTGCATTTGGGAGGCCTTGGATATaGGAACTCTCTTCCTCAGAC | + |
Preference number: 4 (lower is better) Translates to: MDVHCDLAIQLCLELCAFGRPWI*ELSSSD Trigger: GTCTGAGGAAGAGAGTTCCCATATCCAAGGCCTCCC...AAATGCACAGAGCTCAAGGCACAGCTGGATAGCAAGATCGCAGTGGACGTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR CCA 90 bp | CCCAGGCGAATGTTGCCTTTCAGGATTTTGTTGAGGACCCCATGCTTCTCGCTCTTGGATGGGAGGCCTTaGATATGGGAACTCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: PRRMLPFRILLRTPCFSLLDGRP*IWELSS Trigger: GGAAGAGAGTTCCCATATCCAAGGCCTCCCATCCAA...GAGCGAGAAGCATGGGGTCCTCAACAAAATCCTGAAAGGCAACATTCGCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | CAGGACCATTTCAAGCTCACCTTCCATATTTCTTTTCTGCTGCAGCGCCTCATCGTGGTGTGGGGCCCTTaGATGGGAGGCCTTGGATAT | + |
Preference number: 4 (lower is better) Translates to: QDHFKLTFHISFLLQRLIVVWGP*MGGLGY Trigger: ATATCCAAGGCCTCCCATCCAAGGGCCCCACACCAC...GATGAGGCGCTGCAGCAGAAAAGAAATATGGAAGGTGAGCTTGAAATGGTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCCTCTTAGTTAACTCTTaGTGCAAGGCTTCGTTTTCC | + |
Preference number: 4 (lower is better) Translates to: PGLVYFSLAYDTQWLPRALLVNS*CKASFS Trigger: GGAAAACGAAGCCTTGCACCAAGAGTTAACTAAGAG...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | CAGGACCATTTCAAGCTCACCTTCCATATTTCTTTTCTGCTGCAGCGCCTCATCTGCTTTTCCTGGCCCTaGGTCTTTGCTTCCAGGAGC | + |
Preference number: 4 (lower is better) Translates to: QDHFKLTFHISFLLQRLICFSWP*VFASRS Trigger: GCTCCTGGAAGCAAAGACTCAGGGCCAGGAAAAGCA...GATGAGGCGCTGCAGCAGAAAAGAAATATGGAAGGTGAGCTTGAAATGGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | CTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGGGTGTCCCTGGCTTTTaGTTGCTGAATCTCCAACTG | + |
Preference number: 4 (lower is better) Translates to: LVYFSLAYDTQWLPRAFLGVPGF*LLNLQL Trigger: CAGTTGGAGATTCAGCAAGCAAAAGCCAGGGACACC...CAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | AGTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGATGGCCTTTTCTACTTaGTTTCTGAGGACATCAATT | + |
Preference number: 4 (lower is better) Translates to: SGFHGPSCHTGPPEERRKMAFST*FLRTSI Trigger: AATTGATGTCCTCAGAAAGCAAGTAGAAAAGGCCAT...CTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS-3UTR GCA 90 bp | GGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTAGCTTCAGTGCTGCCTaGTTCTTGTACCCCAAATAC | + |
Preference number: 4 (lower is better) Translates to: GWFISPLPMTLSGFHGPSSFSAA*FLYPKY Trigger: GTATTTGGGGTACAAGAAGCAGGCAGCACTGAAGCT...AGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150421.2 |
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CDS-3UTR CCA 90 bp | GGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTTCTCCTTGGCAGTaGACTCCAGGACCATTTCAA | + |
Preference number: 4 (lower is better) Translates to: GWFISPLPMTLSGFHGPSCSPWQ*TPGPFQ Trigger: TTGAAATGGTCCTGGAGTCCACTGCCAAGGAGAACA...AGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000150421.2 |
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3UTR CAA 72 bp | TCCAGCTTGCCCAGGCGAATGTTGCCTTTCAGGATTTaGTTGAGGACCCCATGCTTCTCGCTCTCTAAACAC | + |
Preference number: 4 (lower is better) Translates to: SSLPRRMLPFRI*LRTPCFSLSKH Trigger: GTGTTTAGAGAGCGAGAAGCATGGGGTCCTCAACAAAATCCTGAAAGGCAACATTCGCCTGGGCAAGCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | GGACCATTTCAAGCTCACCTTCCATATTTCTTTTCTGCTGCAGCGCCTCATCCAAGTACCTGGTCCCTGTaGGGCACAGTGTATGTAGCA | + |
Preference number: 4 (lower is better) Translates to: GPFQAHLPYFFSAAAPHPSTWSL*GTVYVA Trigger: TGCTACATACACTGTGCCTCACAGGGACCAGGTACT...TGGATGAGGCGCTGCAGCAGAAAAGAAATATGGAAGGTGAGCTTGAAATGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | CTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGAAAGCAATTCAGGTGTaGCTCCTTCCTGACAGGAAG | + |
Preference number: 4 (lower is better) Translates to: LVYFSLAYDTQWLPRAFLKAIQV*LLPDRK Trigger: CTTCCTGTCAGGAAGGAGTCACACCTGAATTGCTTT...CAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | GAACGCACATGGCTTGACACAGAGAGCAGCTGTCTTCTCCGACCACACAATCTGAGCCAGCAACAGTGGTaGGAGATACTTTATATCCAC | + |
Preference number: 4 (lower is better) Translates to: ERTWLDTESSCLLRPHNLSQQQW*EILYIH Trigger: GTGGATATAAAGTATCTCTCACCACTGTTGCTGGCT...CAGATTGTGTGGTCGGAGAAGACAGCTGCTCTCTGTGTCAAGCCATGTGCGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | CACTGCGATCTTGCTATCCAGCTGTGCCTTGAGCTCTGTGCATTTGGCCTGCAAAGCCAGCAACAGTGGTaGGAGATACTTTATATCCAC | + |
Preference number: 4 (lower is better) Translates to: HCDLAIQLCLELCAFGLQSQQQW*EILYIH Trigger: GTGGATATAAAGTATCTCTCACCACTGTTGCTGGCT...TTGCAGGCCAAATGCACAGAGCTCAAGGCACAGCTGGATAGCAAGATCGCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR TCA 90 bp | TCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGACACGGCTTTTTAGTTCATTaGCAATTGATGTATGGACGT | + |
Preference number: 4 (lower is better) Translates to: STGLLVTLALLRRGGSRHGFLVH*QLMYGR Trigger: ACGTCCATACATCAATTGTCAATGAACTAAAAAGCC...GTGTCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTCTTTCAGGATTTTGTTaGGGACCCCATGCTTCTCGC | + |
Preference number: 4 (lower is better) Translates to: WFISPLPMTLSGFHGPSCLSGFC*GPHASR Trigger: GCGAGAAGCATGGGGTCCTCAACAAAATCCTGAAAG...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079414.12 |
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CDS-3UTR TCA 90 bp | TCATTGACAATTGATGTATGGACGTCCACTGCGATCTTGCTATCCAGCTGTGCCACTCCAGGGCGGTGCTaGGTTTGTCCTTCTCTTTCA | + |
Preference number: 4 (lower is better) Translates to: SLTIDVWTSTAILLSSCATPGRC*VCPSLS Trigger: TGAAAGAGAAGGACAAACTCAGCACCGCCCTGGAGT...GGCACAGCTGGATAGCAAGATCGCAGTGGACGTCCATACATCAATTGTCAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR GCA 90 bp | CTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGCTTGCTATCCAGCTGTaGCTTGAGCTCTGTGCATTT | + |
Preference number: 4 (lower is better) Translates to: LVYFSLAYDTQWLPRAFLLAIQL*LELCAF Trigger: AAATGCACAGAGCTCAAGGCACAGCTGGATAGCAAG...CAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | GTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTTTCTCTTCTTCCTTTTaGAACTGGCTTTTTAGTTCA | + |
Preference number: 4 (lower is better) Translates to: VASTGLLVTLALLRRGGSFSSSF*NWLFSS Trigger: TGAACTAAAAAGCCAGTTGCAAAAGGAAGAAGAGAA...ACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | GCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGAATGGCCTTTTCTACTTaGTTTCTGAGGACATCAATT | + |
Preference number: 4 (lower is better) Translates to: ASTGLLVTLALLRRGGSRMAFST*FLRTSI Trigger: AATTGATGTCCTCAGAAAGCAAGTAGAAAAGGCCAT...TCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS-3UTR GCA 90 bp | CTTCTTCTCTCCAGGGTGGCCTGGAGAAGGCTCCGCATCCTCCTGTTCTCCTTGATGGCCTTTTCTACTTaGTTTCTGAGGACATCAATT | + |
Preference number: 4 (lower is better) Translates to: LLLSRVAWRRLRILLFSLMAFST*FLRTSI Trigger: AATTGATGTCCTCAGAAAGCAAGTAGAAAAGGCCAT...CAAGGAGAACAGGAGGATGCGGAGCCTTCTCCAGGCCACCCTGGAGAGAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | ATGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGTTGACAATTGATGTATaGACGTCCACTGCGATCTTG | + |
Preference number: 4 (lower is better) Translates to: MPGLVYFSLAYDTQWLPRLTIDV*TSTAIL Trigger: CAAGATCGCAGTGGACGTCCATACATCAATTGTCAA...CCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | AGTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTCTTCCTTTTGCAACTaGCTTTTTAGTTCATTGACA | + |
Preference number: 4 (lower is better) Translates to: SGFHGPSCHTGPPEERRKSSFCN*LFSSLT Trigger: TGTCAATGAACTAAAAAGCCAGTTGCAAAAGGAAGA...CTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTTCATCCACCAGGTCTTaGCTTTGCTTCCTTAGGCAA | + |
Preference number: 4 (lower is better) Translates to: WFISPLPMTLSGFHGPSCSSTRS*LCFLRQ Trigger: TTGCCTAAGGAAGCAAAGCCAAGACCTGGTGGATGA...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | CCCAGGCGAATGTTGCCTTTCAGGATTTTGTTGAGGACCCCATGCTTCTCGCTCTTGACAATTGATGTATaGACGTCCACTGCGATCTTG | + |
Preference number: 4 (lower is better) Translates to: PRRMLPFRILLRTPCFSLLTIDV*TSTAIL Trigger: CAAGATCGCAGTGGACGTCCATACATCAATTGTCAA...GAGCGAGAAGCATGGGGTCCTCAACAAAATCCTGAAAGGCAACATTCGCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR TCA 90 bp | TCCAGGACCTCCTGCTTTTCCTGCAGCATCCGATGTAGGTGCTTCACCTCCTTCGGCTTTTTAGTTCATTaGCAATTGATGTATGGACGT | + |
Preference number: 4 (lower is better) Translates to: SRTSCFSCSIRCRCFTSFGFLVH*QLMYGR Trigger: ACGTCCATACATCAATTGTCAATGAACTAAAAAGCC...GAAGGAGGTGAAGCACCTACATCGGATGCTGCAGGAAAAGCAGGAGGTCCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
||
CDS-3UTR GCA 90 bp | CGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTTTGCAGAGTACAGATaGACAGTTTCTTCTTTTAAC | + |
Preference number: 4 (lower is better) Translates to: RGWFISPLPMTLSGFHGPFAEYR*TVSSFN Trigger: GTTAAAAGAAGAAACTGTGCATCTGTACTCTGCAAA...AGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | TCAAGCTCACCTTCCATATTTCTTTTCTGCTGCAGCGCCTCATCCAGGACCTCCCTCTTAGTTAACTCTTaGTGCAAGGCTTCGTTTTCC | + |
Preference number: 4 (lower is better) Translates to: SSSPSIFLFCCSASSRTSLLVNS*CKASFS Trigger: GGAAAACGAAGCCTTGCACCAAGAGTTAACTAAGAG...GGAGGTCCTGGATGAGGCGCTGCAGCAGAAAAGAAATATGGAAGGTGAGCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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3UTR CAA 72 bp | TCATTGACAATTGATGTATGGACGTCCACTGCGATCTaGCTATCCAGCTGTGCCTTGAGCTCTGTGCATTTG | + |
Preference number: 4 (lower is better) Translates to: SLTIDVWTSTAI*LSSCALSSVHL Trigger: CAAATGCACAGAGCTCAAGGCACAGCTGGATAGCAAGATCGCAGTGGACGTCCATACATCAATTGTCAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR GCA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTTTTGCAGAGTACAGATaGACAGTTTCTTCTTTTAAC | + |
Preference number: 4 (lower is better) Translates to: WFISPLPMTLSGFHGPSCFAEYR*TVSSFN Trigger: GTTAAAAGAAGAAACTGTGCATCTGTACTCTGCAAA...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR GCA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTTTCTCTTCTTCCTTTTaGAACTGGCTTTTTAGTTCA | + |
Preference number: 4 (lower is better) Translates to: WFISPLPMTLSGFHGPSCFSSSF*NWLFSS Trigger: TGAACTAAAAAGCCAGTTGCAAAAGGAAGAAGAGAA...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CCA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTTCTTCCTTTTGCAACTaGCTTTTTAGTTCATTGACA | + |
Preference number: 4 (lower is better) Translates to: WFISPLPMTLSGFHGPSCSSFCN*LFSSLT Trigger: TGTCAATGAACTAAAAAGCCAGTTGCAAAAGGAAGA...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS GCA 90 bp | AGGAGGGGGTGTGCGTGGCACCGCTGGCTTCGGAGCGATGCTGGCTaGGGGGAGGAAGCCATGGATGATGTGGTTGAACTGGCTCCGGCG | + |
Preference number: 5 (lower is better) Translates to: RRGCAWHRWLRSDAG*GEEAMDDVVELAPA Trigger: CGCCGGAGCCAGTTCAACCACATCATCCATGGCTTCCTCCCCGCAGCCAGCATCGCTCCGAAGCCAGCGGTGCCACGCACACCCCCTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS GCA 90 bp | AGGAGGGGGTGTGCGTGGCACCGCTGGCTTCGGAGCGATGCTGGCTaGGGGGAGGAAGCCATGGATGATGTGGTTTGGCTCCGGCGGTTC | + |
Preference number: 5 (lower is better) Translates to: RRGCAWHRWLRSDAG*GEEAMDDVVWLRRF Trigger: GAACCGCCGGAGCCAAACCACATCATCCATGGCTTCCTCCCCGCAGCCAGCATCGCTCCGAAGCCAGCGGTGCCACGCACACCCCCTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000206854.2 |
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CDS CCA 90 bp | TGGCCTTGCGCGTGCGCTCCAGCTCGGCCTCTAGCGCTCTGTTCCTaGTGGCCCAGCTGCTCTTCTCCAGAAGCAGGCTCTTCTTCTGCA | + |
Preference number: 5 (lower is better) Translates to: WPCACAPARPLALCS*WPSCSSPEAGSSSA Trigger: TGCAGAAGAAGAGCCTGCTTCTGGAGAAGAGCAGCTGGGCCACCAGGAACAGAGCGCTAGAGGCCGAGCTGGAGCGCACGCGCAAGGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS CCA 90 bp | GCTGGGGAATGGCAACTGTCTGCCCAGTCAACGTGGTTGCCAGGATaGCTGCAGCCAGAGCAGACCTGGGCCTCTCTGGAGAAGGGTTGG | + |
Preference number: 5 (lower is better) Translates to: AGEWQLSAQSTWLPG*LQPEQTWASLEKGW Trigger: CCAACCCTTCTCCAGAGAGGCCCAGGTCTGCTCTGGCTGCAGCCATCCTGGCAACCACGTTGACTGGGCAGACAGTTGCCATTCCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | AGTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGGCCCAGTCAACGTGGTaGCCAGGATGGCTGCAGCCA | + |
Preference number: 5 (lower is better) Translates to: SGFHGPSCHTGPPEERRKAQSTW*PGWLQP Trigger: TGGCTGCAGCCATCCTGGCAACCACGTTGACTGGGC...CTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | CCTGGAGAAGGCTCCGCATCCTCCTGTTCTCCTTGGCAGTGGACTCCAGGACCAGGTGGTGTGGGGCCCTaGGATGGGAGGCCTTGGATA | + |
Preference number: 5 (lower is better) Translates to: PGEGSASSCSPWQWTPGPGGVGP*DGRPWI Trigger: TATCCAAGGCCTCCCATCCAAGGGCCCCACACCACC...TGGTCCTGGAGTCCACTGCCAAGGAGAACAGGAGGATGCGGAGCCTTCTCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS GCA 90 bp | CTCTCAGACCGAGATCTCTGGCGAGGCTGGGGAATGGCAACTGTCTaGCCAGTCAACGTGGTTGCCAGGATGGCTGCAGCCAGAGCAGAC | + |
Preference number: 5 (lower is better) Translates to: LSDRDLWRGWGMATV*PVNVVARMAAARAD Trigger: GTCTGCTCTGGCTGCAGCCATCCTGGCAACCACGTTGACTGGGCAGACAGTTGCCATTCCCCAGCCTCGCCAGAGATCTCGGTCTGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS CCA 90 bp | CGGAGGCATCACTCTCAGACCGAGATCTCTGGCGAGGCTGGGGAATaGCAACTGTCTGCCCAGTCAACGTGGTTGCCAGGATGGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: RRHHSQTEISGEAGE*QLSAQSTWLPGWLQ Trigger: CTGCAGCCATCCTGGCAACCACGTTGACTGGGCAGACAGTTGCCATTCCCCAGCCTCGCCAGAGATCTCGGTCTGAGAGTGATGCCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | CCTGGAGAAGGCTCCGCATCCTCCTGTTCTCCTTGGCAGTGGACTCCAGGACCACTCATTCTGCCAGCTTaGCCGCAGCCTCAGCTCGGA | + |
Preference number: 5 (lower is better) Translates to: PGEGSASSCSPWQWTPGPLILPA*PQPQLG Trigger: TCCGAGCTGAGGCTGCGGCAAAGCTGGCAGAATGAG...TGGTCCTGGAGTCCACTGCCAAGGAGAACAGGAGGATGCGGAGCCTTCTCCAGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | CGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTGCCCAGTCAACGTGGTaGCCAGGATGGCTGCAGCCA | + |
Preference number: 5 (lower is better) Translates to: RGWFISPLPMTLSGFHGPAQSTW*PGWLQP Trigger: TGGCTGCAGCCATCCTGGCAACCACGTTGACTGGGC...AGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | GCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGACTCATTCTGCCAGCTTaGCCGCAGCCTCAGCTCGGA | + |
Preference number: 5 (lower is better) Translates to: ASTGLLVTLALLRRGGSRLILPA*PQPQLG Trigger: TCCGAGCTGAGGCTGCGGCAAAGCTGGCAGAATGAG...TCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | TCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGACACCCAAGCCCACCAGGTTaGCCAGGTACTGGTGAGCAG | + |
Preference number: 5 (lower is better) Translates to: STGLLVTLALLRRGGSRHPSPPG*PGTGEQ Trigger: CTGCTCACCAGTACCTGGCAAACCTGGTGGGCTTGG...GTGTCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS-3UTR CAA 90 bp | CTGCTTTGCCGGCAAAGTCCTCCTGCTGTTCCTTCAGGCGGTGATGGATATCCCCCAAGCCCACCAGGTTaGCCAGGTACTGGTGAGCAG | + |
Preference number: 5 (lower is better) Translates to: LLCRQSPPAVPSGGDGYPPSPPG*PGTGEQ Trigger: CTGCTCACCAGTACCTGGCAAACCTGGTGGGCTTGG...GGGATATCCATCACCGCCTGAAGGAACAGCAGGAGGACTTTGCCGGCAAAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCATCCTCCTGTTCTCCTaGGCAGTGGACTCCAGGACC | + |
Preference number: 5 (lower is better) Translates to: PGLVYFSLAYDTQWLPRAILLFS*AVDSRT Trigger: GGTCCTGGAGTCCACTGCCAAGGAGAACAGGAGGAT...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000150421.2 |
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CDS CCA 90 bp | TCAATGTCGGAGGCATCACTCTCAGACCGAGATCTCTGGCGAGGCTaGGGAATGGCAACTGTCTGCCCAGTCAACGTGGTTGCCAGGATG | + |
Preference number: 5 (lower is better) Translates to: SMSEASLSDRDLWRG*GMATVCPVNVVARM Trigger: CATCCTGGCAACCACGTTGACTGGGCAGACAGTTGCCATTCCCCAGCCTCGCCAGAGATCTCGGTCTGAGAGTGATGCCTCCGACATTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | GTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTCTTGGATGGGAGGCCTaGGATATGGGAACTCTCTTC | + |
Preference number: 5 (lower is better) Translates to: VASTGLLVTLALLRRGGSLGWEA*DMGTLF Trigger: GAAGAGAGTTCCCATATCCAAGGCCTCCCATCCAAG...ACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | GGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTGGTGGTGTGGGGCCCTaGGATGGGAGGCCTTGGATA | + |
Preference number: 5 (lower is better) Translates to: GWFISPLPMTLSGFHGPSGGVGP*DGRPWI Trigger: TATCCAAGGCCTCCCATCCAAGGGCCCCACACCACC...AGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | TCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGACACCTATCCAGCTGTGCCTaGAGCTCTGTGCATTTGGCC | + |
Preference number: 5 (lower is better) Translates to: STGLLVTLALLRRGGSRHLSSCA*SSVHLA Trigger: GGCCAAATGCACAGAGCTCAAGGCACAGCTGGATAG...GTGTCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | GCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGAACTCCCTGCAGCTGGTaGACACCTGTGTTTCAGCAT | + |
Preference number: 5 (lower is better) Translates to: ASTGLLVTLALLRRGGSRTPCSW*TPVFQH Trigger: ATGCTGAAACACAGGTGTCAACCAGCTGCAGGGAGT...TCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | TGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTGGCCCTGAGTCTTaGCTTCCAGGAGCACAAGTT | + |
Preference number: 5 (lower is better) Translates to: CRGWFISPLPMTLSGFHGPGPES*LPGAQV Trigger: AACTTGTGCTCCTGGAAGCAAAGACTCAGGGCCAGG...CCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | TCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGACACAGACTGTCTCGTTCCTaGGTGACAGTCTCTGCCAAG | + |
Preference number: 5 (lower is better) Translates to: STGLLVTLALLRRGGSRHRLSRS*VTVSAK Trigger: CTTGGCAGAGACTGTCACCAAGGAACGAGACAGTCT...GTGTCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS GCA 90 bp | ACTGTCTCGTTCCTTGGTGACAGTCTCTGCCAAGCCCACCAGGTTTaGCAGGTACTGGTGAGCAGACATCTCCTTCCCCATGGCCTTTTC | + |
Preference number: 5 (lower is better) Translates to: TVSFLGDSLCQAHQV*QVLVSRHLLPHGLF Trigger: GAAAAGGCCATGGGGAAGGAGATGTCTGCTCACCAGTACCTGGCAAACCTGGTGGGCTTGGCAGAGACTGTCACCAAGGAACGAGACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS CCA 90 bp | CTGTCCTTTTCAATGTCGGAGGCATCACTCTCAGACCGAGATCTCTaGCGAGGCTGGGGAATGGCAACTGTCTGCCCAGTCAACGTGGTT | + |
Preference number: 5 (lower is better) Translates to: LSFSMSEASLSDRDL*RGWGMATVCPVNVV Trigger: AACCACGTTGACTGGGCAGACAGTTGCCATTCCCCAGCCTCGCCAGAGATCTCGGTCTGAGAGTGATGCCTCCGACATTGAAAAGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | TGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGGGGTGTCCCTGGCTTTaGCTTGCTGAATCTCCAACT | + |
Preference number: 5 (lower is better) Translates to: CRGWFISPLPMTLSGFHGGCPWL*LAESPT Trigger: AGTTGGAGATTCAGCAAGCAAAAGCCAGGGACACCC...CCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | CTGCTGTTCCTTCAGGCGGTGATGGATATCCCCCAGCTTCAGTGCTGCCTGCTTGGGTGTCCCTGGCTTTaGCTTGCTGAATCTCCAACT | + |
Preference number: 5 (lower is better) Translates to: LLFLQAVMDIPQLQCCLLGCPWL*LAESPT Trigger: AGTTGGAGATTCAGCAAGCAAAAGCCAGGGACACCC...AAGCAGGCAGCACTGAAGCTGGGGGATATCCATCACCGCCTGAAGGAACAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | TGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGAGACTGTCTCGTTCCTaGGTGACAGTCTCTGCCAAG | + |
Preference number: 5 (lower is better) Translates to: CRGWFISPLPMTLSGFHGRLSRS*VTVSAK Trigger: CTTGGCAGAGACTGTCACCAAGGAACGAGACAGTCT...CCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | CTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGACCCTCTCCTCCAGCTaGCCCAGGCGAATGTTGCCT | + |
Preference number: 5 (lower is better) Translates to: LVYFSLAYDTQWLPRAFLTLSSS*PRRMLP Trigger: AGGCAACATTCGCCTGGGCAAGCTGGAGGAGAGGGT...CAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079414.12 |
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CDS TCA 90 bp | ACGTCCTGGAGGTGCGCCTGGTGGGTGTCCCTGGCTTTTGCTTGCTaGATCTCCAACTGCTCTATCAGCAGCTTGTTCTCATCTAGAACC | + |
Preference number: 5 (lower is better) Translates to: TSWRCAWWVSLAFAC*ISNCSISSLFSSRT Trigger: GGTTCTAGATGAGAACAAGCTGCTGATAGAGCAGTTGGAGATTCAGCAAGCAAAAGCCAGGGACACCCACCAGGCGCACCTCCAGGACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS CCA 90 bp | CCCATGGCCTTTTCTACTTGCTTTCTGAGGACATCAATTCTCTTTTaGTATCGCCTGTTGGCCTTGCGCGTGCGCTCCAGCTCGGCCTCT | + |
Preference number: 5 (lower is better) Translates to: PMAFSTCFLRTSILF*YRLLALRVRSSSAS Trigger: AGAGGCCGAGCTGGAGCGCACGCGCAAGGCCAACAGGCGATACCAAAAGAGAATTGATGTCCTCAGAAAGCAAGTAGAAAAGGCCATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS-3UTR CAA 90 bp | CTGCTTTGCCGGCAAAGTCCTCCTGCTGTTCCTTCAGGCGGTGATGGATATCCCTTCACAGCTGAGGGCTaGGTTTGCAGAGTACAGATG | + |
Preference number: 5 (lower is better) Translates to: LLCRQSPPAVPSGGDGYPFTAEG*VCRVQM Trigger: CATCTGTACTCTGCAAACCAAGCCCTCAGCTGTGAA...GGGATATCCATCACCGCCTGAAGGAACAGCAGGAGGACTTTGCCGGCAAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | GCTTTCCACGAGCTGCTTTTCCTGGCCCTGAGTCTTTGCTTCCAGGAGCACAAGCTTGGATGGGAGGCCTaGGATATGGGAACTCTCTTC | + |
Preference number: 5 (lower is better) Translates to: AFHELLFLALSLCFQEHKLGWEA*DMGTLF Trigger: GAAGAGAGTTCCCATATCCAAGGCCTCCCATCCAAG...CTTGTGCTCCTGGAAGCAAAGACTCAGGGCCAGGAAAAGCAGCTCGTGGAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR CAA 90 bp | CTGCTCCGTGCTTTCCACGAGCTGCTTTTCCTGGCCCTGAGTCTTTGCTTCCAGAGGGCGGTGCTGAGTTaGTCCTTCTCTTTCATTCTG | + |
Preference number: 5 (lower is better) Translates to: LLRAFHELLFLALSLCFQRAVLS*SFSFIL Trigger: CAGAATGAAAGAGAAGGACAAACTCAGCACCGCCCT...CTGGAAGCAAAGACTCAGGGCCAGGAAAAGCAGCTCGTGGAAAGCACGGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR CAA 90 bp | TCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGACACTGCTCTATCAGCAGCTaGTTCTCATCTAGAACCAGC | + |
Preference number: 5 (lower is better) Translates to: STGLLVTLALLRRGGSRHCSISS*FSSRTS Trigger: GCTGGTTCTAGATGAGAACAAGCTGCTGATAGAGCA...GTGTCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | GTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTGACATCAATTCTCTTTaGGTATCGCCTGTTGGCCTT | + |
Preference number: 5 (lower is better) Translates to: VASTGLLVTLALLRRGGSDINSL*VSPVGL Trigger: AAGGCCAACAGGCGATACCAAAAGAGAATTGATGTC...ACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS GCA 90 bp | CTTAGAAACGTCCTGGAGGTGCGCCTGGTGGGTGTCCCTGGCTTTTaGTTGCTGAATCTCCAACTGCTCTATCAGCAGCTTGTTCTCATC | + |
Preference number: 5 (lower is better) Translates to: LRNVLEVRLVGVPGF*LLNLQLLYQQLVLI Trigger: GATGAGAACAAGCTGCTGATAGAGCAGTTGGAGATTCAGCAAGCAAAAGCCAGGGACACCCACCAGGCGCACCTCCAGGACGTTTCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS CCA 90 bp | GAGATACTTTATATCCACCAACCAGGGTGGTGTGGGGCCCTTGGATaGGAGGCCTTGGATATGGGAACTCTCTTCCTCAGACAAAGGCCT | + |
Preference number: 5 (lower is better) Translates to: EILYIHQPGWCGALG*EALDMGTLFLRQRP Trigger: AGGCCTTTGTCTGAGGAAGAGAGTTCCCATATCCAAGGCCTCCCATCCAAGGGCCCCACACCACCCTGGTTGGTGGATATAAAGTATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000206230.2 |
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CDS-3UTR CAA 90 bp | TCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGACACTCCTTCAGCTTCCTGTaGTCTTTTTCCACCAACTTG | + |
Preference number: 5 (lower is better) Translates to: STGLLVTLALLRRGGSRHSFSFL*SFSTNL Trigger: CAAGTTGGTGGAAAAAGACAACAGGAAGCTGAAGGA...GTGTCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
||
CDS-3UTR CAA 90 bp | GCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGAAGGCCTGAATTTTGTTaGGTAGCGACTGAGTTCTAC | + |
Preference number: 5 (lower is better) Translates to: ASTGLLVTLALLRRGGSRRPEFC*VATEFY Trigger: GTAGAACTCAGTCGCTACCAAACAAAATTCAGGCCT...TCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | CGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTGCTCTATCAGCAGCTaGTTCTCATCTAGAACCAGC | + |
Preference number: 5 (lower is better) Translates to: RGWFISPLPMTLSGFHGPCSISS*FSSRTS Trigger: GCTGGTTCTAGATGAGAACAAGCTGCTGATAGAGCA...AGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
||
CDS-3UTR CAA 90 bp | GTGGCTTCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTTTCCAGGAGCACAAGTaGTTTAGTCAGCTTAGAAAC | + |
Preference number: 5 (lower is better) Translates to: VASTGLLVTLALLRRGGSFQEHK*FSQLRN Trigger: GTTTCTAAGCTGACTAAACAACTTGTGCTCCTGGAA...ACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGAAGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
||
CDS-3UTR CAA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCGACATCAATTCTCTTTaGGTATCGCCTGTTGGCCTT | + |
Preference number: 5 (lower is better) Translates to: PGLVYFSLAYDTQWLPRADINSL*VSPVGL Trigger: AAGGCCAACAGGCGATACCAAAAGAGAATTGATGTC...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS-3UTR CAA 90 bp | CCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCAGTGCTGCCTGCTTCTaGTACCCCAAATACTTAAGA | + |
Preference number: 5 (lower is better) Translates to: PGLVYFSLAYDTQWLPRASAACF*YPKYLR Trigger: TCTTAAGTATTTGGGGTACAAGAAGCAGGCAGCACT...GGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150421.2 |
||
CDS TCA 90 bp | CCACCAGGTCTTGGCTTTGCTTCCTTAGGCAAAGCAATTCAGGTGTaGCTCCTTCCTGACAGGAAGCCTTTTCCGTCTCCTTCAGCTTCC | + |
Preference number: 5 (lower is better) Translates to: PPGLGFASLGKAIQV*LLPDRKPFPSPSAS Trigger: GGAAGCTGAAGGAGACGGAAAAGGCTTCCTGTCAGGAAGGAGTCACACCTGAATTGCTTTGCCTAAGGAAGCAAAGCCAAGACCTGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000206230.2 |
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CDS TCA 90 bp | CTCTCCAGCTGCTCCGTGCTTTCCACGAGCTGCTTTTCCTGGCCCTaGGTCTTTGCTTCCAGGAGCACAAGTTGTTTAGTCAGCTTAGAA | + |
Preference number: 5 (lower is better) Translates to: LSSCSVLSTSCFSWP*VFASRSTSCLVSLE Trigger: TTCTAAGCTGACTAAACAACTTGTGCTCCTGGAAGCAAAGACTCAGGGCCAGGAAAAGCAGCTCGTGGAAAGCACGGAGCAGCTGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS GCA 90 bp | CTGCTCCGTGCTTTCCACGAGCTGCTTTTCCTGGCCCTGAGTCTTTaGTTCCAGGAGCACAAGTTGTTTAGTCAGCTTAGAAACGTCCTG | + |
Preference number: 5 (lower is better) Translates to: LLRAFHELLFLALSL*FQEHKLFSQLRNVL Trigger: CAGGACGTTTCTAAGCTGACTAAACAACTTGTGCTCCTGGAAGCAAAGACTCAGGGCCAGGAAAAGCAGCTCGTGGAAAGCACGGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS GCA 90 bp | CTGAGCCAAATACTTAAGACTGTCTCGTTCCTTGGTGACAGTCTCTaGCAAGCCCACCAGGTTTGCCAGGTACTGGTGAGCAGACATCTC | + |
Preference number: 5 (lower is better) Translates to: LSQILKTVSFLGDSL*QAHQVCQVLVSRHL Trigger: GAGATGTCTGCTCACCAGTACCTGGCAAACCTGGTGGGCTTGGCAGAGACTGTCACCAAGGAACGAGACAGTCTTAAGTATTTGGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079414.12 |
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CDS GCA 90 bp | GTACCCCAAATACTTAAGACTGTCTCGTTCCTTGGTGACAGTCTCTaGCAAGCCCACCAGGTTTGCCAGGTACTGGTGAGCAGACATCTC | + |
Preference number: 5 (lower is better) Translates to: VPQILKTVSFLGDSL*QAHQVCQVLVSRHL Trigger: GAGATGTCTGCTCACCAGTACCTGGCAAACCTGGTGGGCTTGGCAGAGACTGTCACCAAGGAACGAGACAGTCTTAAGTATTTGGGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150421.2 |
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CDS GCA 90 bp | CTCCTGCTGTTCCTTCAGGCGGTGATGGATATCCCCCAGCTTCAGTaGTGCCTGCTTCTTGTACCCCAAATACTTAAGACTGTCTCGTTC | + |
Preference number: 5 (lower is better) Translates to: LLLFLQAVMDIPQLQ*CLLLVPQILKTVSF Trigger: GAACGAGACAGTCTTAAGTATTTGGGGTACAAGAAGCAGGCAGCACTGAAGCTGGGGGATATCCATCACCGCCTGAAGGAACAGCAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150421.2 |
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CDS CCA 90 bp | GTGAGAGATACTTTATATCCACCAACCAGGGTGGTGTGGGGCCCTTaGATGGGAGGCCTTGGATATGGGAACTCTCTTCCTCAGACAAAG | + |
Preference number: 5 (lower is better) Translates to: VRDTLYPPTRVVWGP*MGGLGYGNSLPQTK Trigger: CTTTGTCTGAGGAAGAGAGTTCCCATATCCAAGGCCTCCCATCCAAGGGCCCCACACCACCCTGGTTGGTGGATATAAAGTATCTCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000206230.2 |
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CDS-3UTR CAA 90 bp | CCAGCTGCTCCGTGCTTTCCACGAGCTGCTTTTCCTGGCCCTGAGTCTTTGCTTTCCTTCAGCTTCCTGTaGTCTTTTTCCACCAACTTG | + |
Preference number: 5 (lower is better) Translates to: PAAPCFPRAAFPGPESLLSFSFL*SFSTNL Trigger: CAAGTTGGTGGAAAAAGACAACAGGAAGCTGAAGGA...AAGCAAAGACTCAGGGCCAGGAAAAGCAGCTCGTGGAAAGCACGGAGCAGCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR CAA 90 bp | CTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGGTCCCTGGCTTTTGCTaGCTGAATCTCCAACTGCTC | + |
Preference number: 5 (lower is better) Translates to: LVYFSLAYDTQWLPRAFLVPGFC*LNLQLL Trigger: GAGCAGTTGGAGATTCAGCAAGCAAAAGCCAGGGAC...CAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | GCTTCTTCTCTCCAGGGTGGCCTGGAGAAGGCTCCGCATCCTCCTGTTCTCCTTTTCCAGGAGCACAAGTaGTTTAGTCAGCTTAGAAAC | + |
Preference number: 5 (lower is better) Translates to: ASSLQGGLEKAPHPPVLLFQEHK*FSQLRN Trigger: GTTTCTAAGCTGACTAAACAACTTGTGCTCCTGGAA...AAGGAGAACAGGAGGATGCGGAGCCTTCTCCAGGCCACCCTGGAGAGAAGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | CTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGAGACTGTCTCGTTCCTaGGTGACAGTCTCTGCCAAG | + |
Preference number: 5 (lower is better) Translates to: LVYFSLAYDTQWLPRAFLRLSRS*VTVSAK Trigger: CTTGGCAGAGACTGTCACCAAGGAACGAGACAGTCT...CAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS-3UTR CAA 90 bp | ATGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGTTGCCTTTCAGGATTTaGTTGAGGACCCCATGCTTC | + |
Preference number: 5 (lower is better) Translates to: MPGLVYFSLAYDTQWLPRLPFRI*LRTPCF Trigger: GAAGCATGGGGTCCTCAACAAAATCCTGAAAGGCAA...CCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079414.12 |
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CDS-3UTR CAA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTAGTGCTGCCTGCTTCTaGTACCCCTTTACCCTCTCC | + |
Preference number: 5 (lower is better) Translates to: WFISPLPMTLSGFHGPSCSAACF*YPFTLS Trigger: GGAGAGGGTAAAGGGGTACAAGAAGCAGGCAGCACT...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079414.12 |
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CDS GCA 90 bp | CAGCATCAAATACTTAAGACTGTCTCGTTCCTTGGTGACAGTCTCTaGCAAGCCCACCAGGTTTGCCAGGTACTGGTGAGCAGACATCTC | + |
Preference number: 5 (lower is better) Translates to: QHQILKTVSFLGDSL*QAHQVCQVLVSRHL Trigger: GAGATGTCTGCTCACCAGTACCTGGCAAACCTGGTGGGCTTGGCAGAGACTGTCACCAAGGAACGAGACAGTCTTAAGTATTTGATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS GCA 90 bp | CTGCTGTTCCTTCAGGCGGTGATGGATATCCCCCAGCTTCAGTGCTaGCTGCTTCTTGTACCCCAAATACTTAAGACTGTCTCGTTCCTT | + |
Preference number: 5 (lower is better) Translates to: LLFLQAVMDIPQLQC*LLLVPQILKTVSFL Trigger: AAGGAACGAGACAGTCTTAAGTATTTGGGGTACAAGAAGCAGGCAGCACTGAAGCTGGGGGATATCCATCACCGCCTGAAGGAACAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150421.2 |
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CDS-3UTR CAA 90 bp | CTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTTCACAGCTGAGGGCTaGGTTTGCAGAGTACAGATG | + |
Preference number: 5 (lower is better) Translates to: LVYFSLAYDTQWLPRAFLFTAEG*VCRVQM Trigger: CATCTGTACTCTGCAAACCAAGCCCTCAGCTGTGAA...CAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | CATCCAGGACCTCCTGCTTTTCCTGCAGCATCCGATGTAGGTGCTTCACCTCCTAGGCCTGAATTTTGTTaGGTAGCGACTGAGTTCTAC | + |
Preference number: 5 (lower is better) Translates to: HPGPPAFPAASDVGASPPRPEFC*VATEFY Trigger: GTAGAACTCAGTCGCTACCAAACAAAATTCAGGCCT...AGGAGGTGAAGCACCTACATCGGATGCTGCAGGAAAAGCAGGAGGTCCTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | CTTGCTATCCAGCTGTGCCTTGAGCTCTGTGCATTTGGCCTGCAAGCTCTCCAGAGGCCTGAATTTTGTTaGGTAGCGACTGAGTTCTAC | + |
Preference number: 5 (lower is better) Translates to: LAIQLCLELCAFGLQALQRPEFC*VATEFY Trigger: GTAGAACTCAGTCGCTACCAAACAAAATTCAGGCCT...CTGGAGAGCTTGCAGGCCAAATGCACAGAGCTCAAGGCACAGCTGGATAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR CAA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTCTTGGATGGGAGGCCTaGGATATGGGAACTCTCTTC | + |
Preference number: 5 (lower is better) Translates to: WFISPLPMTLSGFHGPSCLGWEA*DMGTLF Trigger: GAAGAGAGTTCCCATATCCAAGGCCTCCCATCCAAG...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTGTCCCTGGCTTTTGCTaGCTGAATCTCCAACTGCTC | + |
Preference number: 5 (lower is better) Translates to: WFISPLPMTLSGFHGPSCVPGFC*LNLQLL Trigger: GAGCAGTTGGAGATTCAGCAAGCAAAAGCCAGGGAC...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | CAGGACCATTTCAAGCTCACCTTCCATATTTCTTTTCTGCTGCAGCGCCTCATCCCTGGCCCTGAGTCTTaGCTTCCAGGAGCACAAGTT | + |
Preference number: 5 (lower is better) Translates to: QDHFKLTFHISFLLQRLIPGPES*LPGAQV Trigger: AACTTGTGCTCCTGGAAGCAAAGACTCAGGGCCAGG...GATGAGGCGCTGCAGCAGAAAAGAAATATGGAAGGTGAGCTTGAAATGGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | CCTGGAGAAGGCTCCGCATCCTCCTGTTCTCCTTGGCAGTGGACTCCAGGACCATGGCTTTTTAGTTCATaGACAATTGATGTATGGACG | + |
Preference number: 5 (lower is better) Translates to: PGEGSASSCSPWQWTPGPWLFSS*TIDVWT Trigger: CGTCCATACATCAATTGTCAATGAACTAAAAAGCCA...TGGTCCTGGAGTCCACTGCCAAGGAGAACAGGAGGATGCGGAGCCTTCTCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | ATGCCGGGGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGACATCAATTCTCTTTaGGTATCGCCTGTTGGCCTT | + |
Preference number: 5 (lower is better) Translates to: MPGLVYFSLAYDTQWLPRDINSL*VSPVGL Trigger: AAGGCCAACAGGCGATACCAAAAGAGAATTGATGTC...CCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCCCCGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS TCA 90 bp | TCTCCTCCAGCTTGCCCAGGCGAATGTTGCCTTTCAGGATTTTGTTaGGGACCCCATGCTTCTCGCTCTCTAAACACTGAGCCAAATACT | + |
Preference number: 5 (lower is better) Translates to: SPPACPGECCLSGFC*GPHASRSLNTEPNT Trigger: AGTATTTGGCTCAGTGTTTAGAGAGCGAGAAGCATGGGGTCCTCAACAAAATCCTGAAAGGCAACATTCGCCTGGGCAAGCTGGAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079414.12 |
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CDS CCA 90 bp | CGATGGACAATCATCTTCAGCCCCTCGTTTTCATCCACCAGGTCTTaGCTTTGCTTCCTTAGGCAAAGCAATTCAGGTGTGACTCCTTCC | + |
Preference number: 5 (lower is better) Translates to: RWTIIFSPSFSSTRS*LCFLRQSNSGVTPS Trigger: GGAAGGAGTCACACCTGAATTGCTTTGCCTAAGGAAGCAAAGCCAAGACCTGGTGGATGAAAACGAGGGGCTGAAGATGATTGTCCATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000206230.2 |
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CDS-3UTR CAA 90 bp | GGCTGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTCCTTCAGCTTCCTGTaGTCTTTTTCCACCAACTTG | + |
Preference number: 5 (lower is better) Translates to: GWFISPLPMTLSGFHGPSSFSFL*SFSTNL Trigger: CAAGTTGGTGGAAAAAGACAACAGGAAGCTGAAGGA...AGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | TGGTTTATTTCTCCCTTGCCTATGACACTCAGTGGCTTCCACGGGCCTTCTTGTAGGGCGGTGCTGAGTTaGTCCTTCTCTTTCATTCTG | + |
Preference number: 5 (lower is better) Translates to: WFISPLPMTLSGFHGPSCRAVLS*SFSFIL Trigger: CAGAATGAAAGAGAAGGACAAACTCAGCACCGCCCT...ACAAGAAGGCCCGTGGAAGCCACTGAGTGTCATAGGCAAGGGAGAAATAAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | TCCACGGGCCTTCTTGTCACACTGGCCCTCCTGAGGAGAGGAGGAAGTAGACACTGGCTTTTTAGTTCATaGACAATTGATGTATGGACG | + |
Preference number: 5 (lower is better) Translates to: STGLLVTLALLRRGGSRHWLFSS*TIDVWT Trigger: CGTCCATACATCAATTGTCAATGAACTAAAAAGCCA...GTGTCTACTTCCTCCTCTCCTCAGGAGGGCCAGTGTGACAAGAAGGCCCGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS-3UTR CAA 90 bp | TCCTTTTGCAACTGGCTTTTTAGTTCATTGACAATTGATGTATGGACGTCCACTGGTGGTGTGGGGCCCTaGGATGGGAGGCCTTGGATA | + |
Preference number: 5 (lower is better) Translates to: SFCNWLFSSLTIDVWTSTGGVGP*DGRPWI Trigger: TATCCAAGGCCTCCCATCCAAGGGCCCCACACCACC...AGTGGACGTCCATACATCAATTGTCAATGAACTAAAAAGCCAGTTGCAAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000206230.2 |
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CDS-3UTR CAA 90 bp | ACCATTTCAAGCTCACCTTCCATATTTCTTTTCTGCTGCAGCGCCTCATCCAGGAGGGCGGTGCTGAGTTaGTCCTTCTCTTTCATTCTG | + |
Preference number: 5 (lower is better) Translates to: TISSSPSIFLFCCSASSRRAVLS*SFSFIL Trigger: CAGAATGAAAGAGAAGGACAAACTCAGCACCGCCCT...CCTGGATGAGGCGCTGCAGCAGAAAAGAAATATGGAAGGTGAGCTTGAAATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS TCA 90 bp | TTAGTTAACTCTTGGTGCAAGGCTTCGTTTTCCTTCACGACTTCCTaGACTCGAAGCCTAAAGGTTTTCATTTCCTCCTCCAGGGCGGTG | + |
Preference number: 5 (lower is better) Translates to: LVNSWCKASFSFTTS*TRSLKVFISSSRAV Trigger: CACCGCCCTGGAGGAGGAAATGAAAACCTTTAGGCTTCGAGTTCAGGAAGTCGTGAAGGAAAACGAAGCCTTGCACCAAGAGTTAACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS TCA 90 bp | TTTGTCCTTCTCTTTCATTCTGTCTTCATAAGCCAGCAACAGTGGTaGGAGATACTTTATATCCACCAACCAGGGTGGTGTGGGGCCCTT | + |
Preference number: 5 (lower is better) Translates to: FVLLFHSVFISQQQW*EILYIHQPGWCGAL Trigger: AAGGGCCCCACACCACCCTGGTTGGTGGATATAAAGTATCTCTCACCACTGTTGCTGGCTTATGAAGACAGAATGAAAGAGAAGGACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000206230.2 |
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CDS CCA 90 bp | TCTTCCTTTTGCAACTGGCTTTTTAGTTCATTGACAATTGATGTATaGACGTCCACTGCGATCTTGCTATCCAGCTGTGCCTTGAGCTCT | + |
Preference number: 5 (lower is better) Translates to: SSFCNWLFSSLTIDV*TSTAILLSSCALSS Trigger: AGAGCTCAAGGCACAGCTGGATAGCAAGATCGCAGTGGACGTCCATACATCAATTGTCAATGAACTAAAAAGCCAGTTGCAAAAGGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS CCA 72 bp | TGGAGAAGGGTTGGGGCTCCGAGGAGGGGGTGTGCGTaGCACCGCTGGCTTCGGAGCGATGCTGGCTGCGGG | + |
Preference number: 6 (lower is better) Translates to: WRRVGAPRRGCA*HRWLRSDAGCG Trigger: CCCGCAGCCAGCATCGCTCCGAAGCCAGCGGTGCCACGCACACCCCCTCCTCGGAGCCCCAACCCTTCTCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000206854.2 |
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CDS GCA 72 bp | TCTCTGGAGAAGGGTTGGGGCTCCGAGGAGGGGGTGTaGGTGGCACCGCTGGCTTCGGAGCGATGCTGGCTG | + |
Preference number: 6 (lower is better) Translates to: SLEKGWGSEEGV*VAPLASERCWL Trigger: CAGCCAGCATCGCTCCGAAGCCAGCGGTGCCACGCACACCCCCTCCTCGGAGCCCCAACCCTTCTCCAGAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000206854.2 |
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CDS CCA 72 bp | GCGTGCGCTCCAGCTCGGCCTCTAGCGCTCTGTTCCTaGTGGCCCAGCTGCTCTTCTCCAGAAGCAGGCTCT | + |
Preference number: 6 (lower is better) Translates to: ACAPARPLALCS*WPSCSSPEAGS Trigger: AGAGCCTGCTTCTGGAGAAGAGCAGCTGGGCCACCAGGAACAGAGCGCTAGAGGCCGAGCTGGAGCGCACGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS GCA 72 bp | TGTGCGTGGCACCGCTGGCTTCGGAGCGATGCTGGCTaGGGGGAGGAAGCCATGGATGATGTGGTTGAACTG | + |
Preference number: 6 (lower is better) Translates to: CAWHRWLRSDAG*GEEAMDDVVEL Trigger: CAGTTCAACCACATCATCCATGGCTTCCTCCCCGCAGCCAGCATCGCTCCGAAGCCAGCGGTGCCACGCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS GCA 72 bp | CGAGATCTCTGGCGAGGCTGGGGAATGGCAACTGTCTaGCCAGTCAACGTGGTTGCCAGGATGGCTGCAGCC | + |
Preference number: 6 (lower is better) Translates to: RDLWRGWGMATV*PVNVVARMAAA Trigger: GGCTGCAGCCATCCTGGCAACCACGTTGACTGGGCAGACAGTTGCCATTCCCCAGCCTCGCCAGAGATCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS GCA 72 bp | AACTGTCTGCCCAGTCAACGTGGTTGCCAGGATGGCTaGAGCCAGAGCAGACCTGGGCCTCTCTGGAGAAGG | + |
Preference number: 6 (lower is better) Translates to: NCLPSQRGCQDG*SQSRPGPLWRR Trigger: CCTTCTCCAGAGAGGCCCAGGTCTGCTCTGGCTGCAGCCATCCTGGCAACCACGTTGACTGGGCAGACAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS GCA 72 bp | CAATTCTCTTTTGGTATCGCCTGTTGGCCTTGCGCGTaGGCTCCAGCTCGGCCTCTAGCGCTCTGTTCCTGG | + |
Preference number: 6 (lower is better) Translates to: QFSFGIACWPCA*APARPLALCSW Trigger: CCAGGAACAGAGCGCTAGAGGCCGAGCTGGAGCGCACGCGCAAGGCCAACAGGCGATACCAAAAGAGAATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS CCA 72 bp | CACTCTCAGACCGAGATCTCTGGCGAGGCTGGGGAATaGCAACTGTCTGCCCAGTCAACGTGGTTGCCAGGA | + |
Preference number: 6 (lower is better) Translates to: HSQTEISGEAGE*QLSAQSTWLPG Trigger: TCCTGGCAACCACGTTGACTGGGCAGACAGTTGCCATTCCCCAGCCTCGCCAGAGATCTCGGTCTGAGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS GCA 72 bp | GGACATCAATTCTCTTTTGGTATCGCCTGTTGGCCTTaGGCGTGCGCTCCAGCTCGGCCTCTAGCGCTCTGT | + |
Preference number: 6 (lower is better) Translates to: GHQFSFGIACWP*ACAPARPLALC Trigger: ACAGAGCGCTAGAGGCCGAGCTGGAGCGCACGCGCAAGGCCAACAGGCGATACCAAAAGAGAATTGATGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS CCA 72 bp | GAGGCATCACTCTCAGACCGAGATCTCTGGCGAGGCTaGGGAATGGCAACTGTCTGCCCAGTCAACGTGGTT | + |
Preference number: 6 (lower is better) Translates to: EASLSDRDLWRG*GMATVCPVNVV Trigger: AACCACGTTGACTGGGCAGACAGTTGCCATTCCCCAGCCTCGCCAGAGATCTCGGTCTGAGAGTGATGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS CCA 72 bp | TCAATGTCGGAGGCATCACTCTCAGACCGAGATCTCTaGCGAGGCTGGGGAATGGCAACTGTCTGCCCAGTC | + |
Preference number: 6 (lower is better) Translates to: SMSEASLSDRDL*RGWGMATVCPV Trigger: GACTGGGCAGACAGTTGCCATTCCCCAGCCTCGCCAGAGATCTCGGTCTGAGAGTGATGCCTCCGACATTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS GCA 72 bp | GTCCTGGAGGTGCGCCTGGTGGGTGTCCCTGGCTTTTaGTTGCTGAATCTCCAACTGCTCTATCAGCAGCTT | + |
Preference number: 6 (lower is better) Translates to: VLEVRLVGVPGF*LLNLQLLYQQL Trigger: AAGCTGCTGATAGAGCAGTTGGAGATTCAGCAAGCAAAAGCCAGGGACACCCACCAGGCGCACCTCCAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS GCA 72 bp | TTCCTTGGTGACAGTCTCTGCCAAGCCCACCAGGTTTaGCAGGTACTGGTGAGCAGACATCTCCTTCCCCAT | + |
Preference number: 6 (lower is better) Translates to: FLGDSLCQAHQV*QVLVSRHLLPH Trigger: ATGGGGAAGGAGATGTCTGCTCACCAGTACCTGGCAAACCTGGTGGGCTTGGCAGAGACTGTCACCAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS CCA 72 bp | TATATCCACCAACCAGGGTGGTGTGGGGCCCTTGGATaGGAGGCCTTGGATATGGGAACTCTCTTCCTCAGA | + |
Preference number: 6 (lower is better) Translates to: YIHQPGWCGALG*EALDMGTLFLR Trigger: TCTGAGGAAGAGAGTTCCCATATCCAAGGCCTCCCATCCAAGGGCCCCACACCACCCTGGTTGGTGGATATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000206230.2 |
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CDS CAA 72 bp | TTTCTGAGGACATCAATTCTCTTTTGGTATCGCCTGTaGGCCTTGCGCGTGCGCTCCAGCTCGGCCTCTAGC | + |
Preference number: 6 (lower is better) Translates to: FLRTSILFWYRL*ALRVRSSSASS Trigger: GCTAGAGGCCGAGCTGGAGCGCACGCGCAAGGCCAACAGGCGATACCAAAAGAGAATTGATGTCCTCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS CAA 90 bp | GAGCTGCTTTTCCTGGCCCTGAGTCTTTGCTTCCAGGAGCACAAGTaGTTTAGTCAGCTTAGAAACGTCCTGGAGGTGCGCCTGGTGGGT | + |
Preference number: 6 (lower is better) Translates to: ELLFLALSLCFQEHK*FSQLRNVLEVRLVG Trigger: ACCCACCAGGCGCACCTCCAGGACGTTTCTAAGCTGACTAAACAACTTGTGCTCCTGGAAGCAAAGACTCAGGGCCAGGAAAAGCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS CAA 90 bp | TCTACTTGCTTTCTGAGGACATCAATTCTCTTTTGGTATCGCCTGTaGGCCTTGCGCGTGCGCTCCAGCTCGGCCTCTAGCGCTCTGTTC | + |
Preference number: 6 (lower is better) Translates to: STCFLRTSILFWYRL*ALRVRSSSASSALF Trigger: GAACAGAGCGCTAGAGGCCGAGCTGGAGCGCACGCGCAAGGCCAACAGGCGATACCAAAAGAGAATTGATGTCCTCAGAAAGCAAGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS TCA 72 bp | AGGTGCGCCTGGTGGGTGTCCCTGGCTTTTGCTTGCTaGATCTCCAACTGCTCTATCAGCAGCTTGTTCTCA | + |
Preference number: 6 (lower is better) Translates to: RCAWWVSLAFAC*ISNCSISSLFS Trigger: TGAGAACAAGCTGCTGATAGAGCAGTTGGAGATTCAGCAAGCAAAAGCCAGGGACACCCACCAGGCGCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS CCA 72 bp | ACTTTATATCCACCAACCAGGGTGGTGTGGGGCCCTTaGATGGGAGGCCTTGGATATGGGAACTCTCTTCCT | + |
Preference number: 6 (lower is better) Translates to: TLYPPTRVVWGP*MGGLGYGNSLP Trigger: AGGAAGAGAGTTCCCATATCCAAGGCCTCCCATCCAAGGGCCCCACACCACCCTGGTTGGTGGATATAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000206230.2 |
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CDS CCA 72 bp | AGGAGCACAAGTTGTTTAGTCAGCTTAGAAACGTCCTaGAGGTGCGCCTGGTGGGTGTCCCTGGCTTTTGCT | + |
Preference number: 6 (lower is better) Translates to: RSTSCLVSLETS*RCAWWVSLAFA Trigger: AGCAAAAGCCAGGGACACCCACCAGGCGCACCTCCAGGACGTTTCTAAGCTGACTAAACAACTTGTGCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS CAA 72 bp | TACTTTATATCCACCAACCAGGGTGGTGTGGGGCCCTaGGATGGGAGGCCTTGGATATGGGAACTCTCTTCC | + |
Preference number: 6 (lower is better) Translates to: YFISTNQGGVGP*DGRPWIWELSS Trigger: GGAAGAGAGTTCCCATATCCAAGGCCTCCCATCCAAGGGCCCCACACCACCCTGGTTGGTGGATATAAAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000206230.2 |
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CDS CAA 90 bp | GCTGTGCGCTTCTCCAGCATCAAATACTTAAGACTGTCTCGTTCCTaGGTGACAGTCTCTGCCAAGCCCACCAGGTTTGCCAGGTACTGG | + |
Preference number: 6 (lower is better) Translates to: AVRFSSIKYLRLSRS*VTVSAKPTRFARYW Trigger: CCAGTACCTGGCAAACCTGGTGGGCTTGGCAGAGACTGTCACCAAGGAACGAGACAGTCTTAAGTATTTGATGCTGGAGAAGCGCACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS CAA 90 bp | GCTGCCTGCTTCTTGTACCCCAAATACTTAAGACTGTCTCGTTCCTaGGTGACAGTCTCTGCCAAGCCCACCAGGTTTGCCAGGTACTGG | + |
Preference number: 6 (lower is better) Translates to: AACFLYPKYLRLSRS*VTVSAKPTRFARYW Trigger: CCAGTACCTGGCAAACCTGGTGGGCTTGGCAGAGACTGTCACCAAGGAACGAGACAGTCTTAAGTATTTGGGGTACAAGAAGCAGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150421.2 |
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CDS TCA 72 bp | TGCTCCGTGCTTTCCACGAGCTGCTTTTCCTGGCCCTaGGTCTTTGCTTCCAGGAGCACAAGTTGTTTAGTC | + |
Preference number: 6 (lower is better) Translates to: CSVLSTSCFSWP*VFASRSTSCLV Trigger: GACTAAACAACTTGTGCTCCTGGAAGCAAAGACTCAGGGCCAGGAAAAGCAGCTCGTGGAAAGCACGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS GCA 72 bp | ATACTTAAGACTGTCTCGTTCCTTGGTGACAGTCTCTaGCAAGCCCACCAGGTTTGCCAGGTACTGGTGAGC | + |
Preference number: 6 (lower is better) Translates to: ILKTVSFLGDSL*QAHQVCQVLVS Trigger: GCTCACCAGTACCTGGCAAACCTGGTGGGCTTGGCAGAGACTGTCACCAAGGAACGAGACAGTCTTAAGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000150421.2 |
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CDS CAA 72 bp | TTCCTGGCCCTGAGTCTTTGCTTCCAGGAGCACAAGTaGTTTAGTCAGCTTAGAAACGTCCTGGAGGTGCGC | + |
Preference number: 6 (lower is better) Translates to: FLALSLCFQEHK*FSQLRNVLEVR Trigger: GCGCACCTCCAGGACGTTTCTAAGCTGACTAAACAACTTGTGCTCCTGGAAGCAAAGACTCAGGGCCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS CAA 90 bp | GGTGAGAGATACTTTATATCCACCAACCAGGGTGGTGTGGGGCCCTaGGATGGGAGGCCTTGGATATGGGAACTCTCTTCCTCAGACAAA | + |
Preference number: 6 (lower is better) Translates to: GERYFISTNQGGVGP*DGRPWIWELSSSDK Trigger: TTTGTCTGAGGAAGAGAGTTCCCATATCCAAGGCCTCCCATCCAAGGGCCCCACACCACCCTGGTTGGTGGATATAAAGTATCTCTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000206230.2 |
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CDS GCA 72 bp | CTTCAGGCGGTGATGGATATCCCCCAGCTTCAGTGCTaGCTGCTTCTTGTACCCCAAATACTTAAGACTGTC | + |
Preference number: 6 (lower is better) Translates to: LQAVMDIPQLQC*LLLVPQILKTV Trigger: GACAGTCTTAAGTATTTGGGGTACAAGAAGCAGGCAGCACTGAAGCTGGGGGATATCCATCACCGCCTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150421.2 |
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CDS CAA 90 bp | GCCTTTTCCGTCTCCTTCAGCTTCCTGTTGTCTTTTTCCACCAACTaGAGCTTCAGCTGTAAGTCCTTCATTGCCTGTCTCAGAGCGCTC | + |
Preference number: 6 (lower is better) Translates to: AFSVSFSFLLSFSTN*SFSCKSFIACLRAL Trigger: GAGCGCTCTGAGACAGGCAATGAAGGACTTACAGCTGAAGCTCAAGTTGGTGGAAAAAGACAACAGGAAGCTGAAGGAGACGGAAAAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS TCA 72 bp | CTTGGCTTTGCTTCCTTAGGCAAAGCAATTCAGGTGTaGCTCCTTCCTGACAGGAAGCCTTTTCCGTCTCCT | + |
Preference number: 6 (lower is better) Translates to: LGFASLGKAIQV*LLPDRKPFPSP Trigger: AGGAGACGGAAAAGGCTTCCTGTCAGGAAGGAGTCACACCTGAATTGCTTTGCCTAAGGAAGCAAAGCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000206230.2 |
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CDS GCA 72 bp | GCTTTCCACGAGCTGCTTTTCCTGGCCCTGAGTCTTTaGTTCCAGGAGCACAAGTTGTTTAGTCAGCTTAGA | + |
Preference number: 6 (lower is better) Translates to: AFHELLFLALSL*FQEHKLFSQLR Trigger: TCTAAGCTGACTAAACAACTTGTGCTCCTGGAAGCAAAGACTCAGGGCCAGGAAAAGCAGCTCGTGGAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS CAA 72 bp | TGCCTGTCTCAGAGCGCTCAGTTCACAGCTGAGGGCTaGGTTTGCAGAGTACAGATGCACAGTTTCTTCTTT | + |
Preference number: 6 (lower is better) Translates to: CLSQSAQFTAEG*VCRVQMHSFFF Trigger: AAAGAAGAAACTGTGCATCTGTACTCTGCAAACCAAGCCCTCAGCTGTGAACTGAGCGCTCTGAGACAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS CAA 72 bp | TTCTCCAGCATCAAATACTTAAGACTGTCTCGTTCCTaGGTGACAGTCTCTGCCAAGCCCACCAGGTTTGCC | + |
Preference number: 6 (lower is better) Translates to: FSSIKYLRLSRS*VTVSAKPTRFA Trigger: GGCAAACCTGGTGGGCTTGGCAGAGACTGTCACCAAGGAACGAGACAGTCTTAAGTATTTGATGCTGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141704.8 |
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CDS CAA 72 bp | TTCTTGTACCCCAAATACTTAAGACTGTCTCGTTCCTaGGTGACAGTCTCTGCCAAGCCCACCAGGTTTGCC | + |
Preference number: 6 (lower is better) Translates to: FLYPKYLRLSRS*VTVSAKPTRFA Trigger: GGCAAACCTGGTGGGCTTGGCAGAGACTGTCACCAAGGAACGAGACAGTCTTAAGTATTTGGGGTACAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150421.2 |
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CDS TCA 72 bp | TCTAGATTCAGAACAGAGTGTTTAACATCTTTCTGCTaGGTGTGCTGTGGTGTTGAGGAGGAGGAGGAGGAG | + |
Preference number: 6 (lower is better) Translates to: SRFRTECLTSFC*VCCGVEEEEEE Trigger: CTCCTCCTCCTCCTCCTCAACACCACAGCACACTCAGCAGAAAGATGTTAAACACTCTGTTCTGAATCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS TCA 72 bp | TCTTGGTGCAAGGCTTCGTTTTCCTTCACGACTTCCTaGACTCGAAGCCTAAAGGTTTTCATTTCCTCCTCC | + |
Preference number: 6 (lower is better) Translates to: SWCKASFSFTTS*TRSLKVFISSS Trigger: GGAGGAGGAAATGAAAACCTTTAGGCTTCGAGTTCAGGAAGTCGTGAAGGAAAACGAAGCCTTGCACCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS CAA 72 bp | GTCTCCTTCAGCTTCCTGTTGTCTTTTTCCACCAACTaGAGCTTCAGCTGTAAGTCCTTCATTGCCTGTCTC | + |
Preference number: 6 (lower is better) Translates to: VSFSFLLSFSTN*SFSCKSFIACL Trigger: GAGACAGGCAATGAAGGACTTACAGCTGAAGCTCAAGTTGGTGGAAAAAGACAACAGGAAGCTGAAGGAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 |
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CDS CAA 72 bp | GGAACTCTCTTCCTCAGACAAAGGCCTGAATTTTGTTaGGTAGCGACTGAGTTCTACGTTCAATCGATGGAC | + |
Preference number: 6 (lower is better) Translates to: GTLFLRQRPEFC*VATEFYVQSMD Trigger: GTCCATCGATTGAACGTAGAACTCAGTCGCTACCAAACAAAATTCAGGCCTTTGTCTGAGGAAGAGAGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000206230.2 |
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CDS TCA 72 bp | CTCTTTCATTCTGTCTTCATAAGCCAGCAACAGTGGTaGGAGATACTTTATATCCACCAACCAGGGTGGTGT | + |
Preference number: 6 (lower is better) Translates to: LFHSVFISQQQW*EILYIHQPGWC Trigger: ACACCACCCTGGTTGGTGGATATAAAGTATCTCTCACCACTGTTGCTGGCTTATGAAGACAGAATGAAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000206230.2 |
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CDS CAA 90 bp | TTGGATATGGGAACTCTCTTCCTCAGACAAAGGCCTGAATTTTGTTaGGTAGCGACTGAGTTCTACGTTCAATCGATGGACAATCATCTT | + |
Preference number: 6 (lower is better) Translates to: LDMGTLFLRQRPEFC*VATEFYVQSMDNHL Trigger: AAGATGATTGTCCATCGATTGAACGTAGAACTCAGTCGCTACCAAACAAAATTCAGGCCTTTGTCTGAGGAAGAGAGTTCCCATATCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079414.12 ENSMUST00000141704.8 ENSMUST00000206230.2 |