Pregenerated sensors for CEP85L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038594Ensembl transcript IDs: ENSMUST00000095691.7, ENSMUST00000220376.2, ENSMUST00000220443.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGTCCCTTTTACAAATATCCTTGCAGAGATGCCCACGGAGTCAGAAACAAGAACGTGGCTGTGTTAGAATaGCTCAGCATGAACAGACTA | + |
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Preference number: 2 (lower is better) Translates to: SPFYKYPCRDAHGVRNKNVAVLE*LSMNRL Trigger: TAGTCTGTTCATGCTGAGTCATTCTAACACAGCCAC...GTTCTTGTTTCTGACTCCGTGGGCATCTCTGCAAGGATATTTGTAAAAGGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR-3UTR GCA 90 bp | CCATTCTCAACTAAAAGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGCTGGTTTGTCTTCAGTaGCAACATCAAGCCAACTTC | + |
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Preference number: 2 (lower is better) Translates to: PFSTKRFYGLYSLISIVLLVCLQ*QHQANF Trigger: GAAGTTGGCTTGATGTTGGCACTGAAGACAAACCAG...CAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCTTTTAGTTGAGAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR CAA 90 bp | ACAACAACAAAGCTGAAGTGCATGGCAAGGAGCTTCATCTTTCCCTaGTGCATCCTAAAGAGAAACAAAGGATTCAACACAGCAGCATTT | + |
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Preference number: 2 (lower is better) Translates to: TTTKLKCMARSFIFP*CILKRNKGFNTAAF Trigger: AAATGCTGCTGTGTTGAATCCTTTGTTTCTCTTTAGGATGCACAAGGGAAAGATGAAGCTCCTTGCCATGCACTTCAGCTTTGTTGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCCCTTTTACAAATATCCTTGCAGAGATGCCCACGGAGTCAGAAACAAGAACAACCAATTCATAGAGTaGTGCTTTGCCCATATTGAA | + |
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Preference number: 2 (lower is better) Translates to: SPFYKYPCRDAHGVRNKNNQFIE*CFAHIE Trigger: TTCAATATGGGCAAAGCATCACTCTATGAATTGGTT...GTTCTTGTTTCTGACTCCGTGGGCATCTCTGCAAGGATATTTGTAAAAGGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR-3UTR CCA 90 bp | AAGACAGGGCATTATTATGCCCGTGACTCAGCTCATTTTACCTGCACAGGTAACAACACAAACCAGCAATaGTTGTTCATTAGTGCTATA | + |
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Preference number: 2 (lower is better) Translates to: KTGHYYARDSAHFTCTGNNTNQQ*LFISAI Trigger: TATAGCACTAATGAACAACCATTGCTGGTTTGTGTT...GTTACCTGTGCAGGTAAAATGAGCTGAGTCACGGGCATAATAATGCCCTGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR CAA 90 bp | CCTTCGCACAGCTCAGTACAGTCAATTTCTAAAACACAAATGATTTaGCTTGCTACCCTTGTACATTATAATACCACCTTGGTACTGGAT | + |
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Preference number: 2 (lower is better) Translates to: PSHSSVQSISKTQMI*LATLVHYNTTLVLD Trigger: ATCCAGTACCAAGGTGGTATTATAATGTACAAGGGTAGCAAGCAAAATCATTTGTGTTTTAGAAATTGACTGTACTGAGCTGTGCGAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGTTCTTTTTCTTGCAGACCTTAGTAACGTGATGTGTTTGCCTGATTTGATCTTCATCTTTCCCTTGTaGATCCTAAAGAGAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: FVLFLADLSNVMCLPDLIFIFPL*ILKRNK Trigger: TTTGTTTCTCTTTAGGATGCACAAGGGAAAGATGAA...GATCAAATCAGGCAAACACATCACGTTACTAAGGTCTGCAAGAAAAAGAACAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR GCA 72 bp | CTCACTCAGAGAACATCCTATCACTGTAACTACAGATaGAGTGGCAGGACTCTAGATGAGAGCTTCGGCAAG | + |
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Preference number: 3 (lower is better) Translates to: LTQRTSYHCNYR*SGRTLDESFGK Trigger: CTTGCCGAAGCTCTCATCTAGAGTCCTGCCACTGCATCTGTAGTTACAGTGATAGGATGTTCTCTGAGTGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR GCA 72 bp | GGGCATTATTATGCCCGTGACTCAGCTCATTTTACCTaGACAGGTAACCATGTCTTCCCCATGACAGCTATT | + |
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Preference number: 3 (lower is better) Translates to: GHYYARDSAHFT*TGNHVFPMTAI Trigger: AATAGCTGTCATGGGGAAGACATGGTTACCTGTGCAGGTAAAATGAGCTGAGTCACGGGCATAATAATGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR GCA 72 bp | GGGGCAGAAGGTGGTTCCAATGTCATCTGCTATGCATaGTCACTCAGAGAACATCCTATCACTGTAACTACA | + |
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Preference number: 3 (lower is better) Translates to: GAEGGSNVICYA*SLREHPITVTT Trigger: TGTAGTTACAGTGATAGGATGTTCTCTGAGTGAGCATGCATAGCAGATGACATTGGAACCACCTTCTGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCCCTTTTACAAATATCCTTGCAGAGATGCCCACGGAGTCAGAAACAAGAACAGTAACGTGATGTGTTaGCCTGATTTGATCAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: SPFYKYPCRDAHGVRNKNSNVMC*PDLISP Trigger: GGGACTGATCAAATCAGGCAAACACATCACGTTACT...GTTCTTGTTTCTGACTCCGTGGGCATCTCTGCAAGGATATTTGTAAAAGGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR TCA 72 bp | GTTAGGGAGCTGGAATGCATAATCACCCCAATACACTaGTTTATTAGTAGCCAGATCCCAAGAAGAGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: VRELECIITPIH*FISSQIPRREG Trigger: CCCTTCTCTTCTTGGGATCTGGCTACTAATAAATCAGTGTATTGGGGTGATTATGCATTCCAGCTCCCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR TCA 72 bp | CTCATTTTACCTGCACAGGTAACCATGTCTTCCCCATaGCAGCTATTAATCTACCTGTGTTCTATGTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: LILPAQVTMSSP*QLLIYLCSMWL Trigger: CAGCCACATAGAACACAGGTAGATTAATAGCTGTCATGGGGAAGACATGGTTACCTGTGCAGGTAAAATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR GCA 72 bp | CTTCAGAAAGCATGTGTAACAACAACAAAGCTGAAGTaGATGGCAAGGAGCTTCATCTTTCCCTTGTGCATC | + |
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Preference number: 3 (lower is better) Translates to: LQKACVTTTKLK*MARSFIFPLCI Trigger: GATGCACAAGGGAAAGATGAAGCTCCTTGCCATGCACTTCAGCTTTGTTGTTGTTACACATGCTTTCTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR GCA 72 bp | CCAGTTTCCTCCAAATCCCCTCCAAAGCTGACTATGTaGCAAAGCCCTTTGTTAATTCTAGACTCGAATAAG | + |
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Preference number: 3 (lower is better) Translates to: PVSSKSPPKLTM*QSPLLILDSNK Trigger: CTTATTCGAGTCTAGAATTAACAAAGGGCTTTGGCACATAGTCAGCTTTGGAGGGGATTTGGAGGAAACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR GCA 72 bp | ATGAAACAGTCCCTTTTACAAATATCCTTGCAGAGATaGCCACGGAGTCAGAAACAAGAACGGTACTGGACA | + |
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Preference number: 3 (lower is better) Translates to: MKQSLLQISLQR*PRSQKQERYWT Trigger: TGTCCAGTACCGTTCTTGTTTCTGACTCCGTGGGCATCTCTGCAAGGATATTTGTAAAAGGGACTGTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR GCA 72 bp | GGCACAAAGGCACAAAAGGTTCTCTCTGTATGCAGCTaGAACAGTGTTGCCGATGACTTATTGATTTCAAAG | + |
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Preference number: 3 (lower is better) Translates to: GTKAQKVLSVCS*NSVADDLLISK Trigger: CTTTGAAATCAATAAGTCATCGGCAACACTGTTGCAGCTGCATACAGAGAGAACCTTTTGTGCCTTTGTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR CCA 72 bp | CCAATGAACACATCACTAAAGAACCAAACTCTCAAGTaGCTAATTCCTATCTGGGTTAGGGAGCTGGAATGC | + |
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Preference number: 3 (lower is better) Translates to: PMNTSLKNQTLK*LIPIWVRELEC Trigger: GCATTCCAGCTCCCTAACCCAGATAGGAATTAGCCACTTGAGAGTTTGGTTCTTTAGTGATGTGTTCATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR-3UTR CAA 90 bp | AAGACAGGGCATTATTATGCCCGTGACTCAGCTCATTTTACCTGCACAGGTAACTTTCATAATGGATCATaGTTGCTGTGGACCAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: KTGHYYARDSAHFTCTGNFHNGS*LLWTKT Trigger: AGTCTTGGTCCACAGCAACAATGATCCATTATGAAA...GTTACCTGTGCAGGTAAAATGAGCTGAGTCACGGGCATAATAATGCCCTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR CCA 72 bp | CTAAAGAACCAAACTCTCAAGTGGCTAATTCCTATCTaGGTTAGGGAGCTGGAATGCATAATCACCCCAATA | + |
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Preference number: 3 (lower is better) Translates to: LKNQTLKWLIPI*VRELECIITPI Trigger: TATTGGGGTGATTATGCATTCCAGCTCCCTAACCCAGATAGGAATTAGCCACTTGAGAGTTTGGTTCTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR-3UTR CAA 90 bp | GAAACAAGAACGGTACTGGACATGAGCTTCCAAGTTAGAACTGTCCAATATCCAATGTGCCAAAGCCCTTaGTTAATTCTAGACTCGAAT | + |
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Preference number: 3 (lower is better) Translates to: ETRTVLDMSFQVRTVQYPMCQSP*LILDSN Trigger: ATTCGAGTCTAGAATTAACAAAGGGCTTTGGCACAT...TGGATATTGGACAGTTCTAACTTGGAAGCTCATGTCCAGTACCGTTCTTGTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR TCA 72 bp | GCTACACTGCAGTTGAGTCATGTAGATGTCAGTATCTaGCTTAACAGCTTGAACCATCTACACAGATATTCT | + |
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Preference number: 3 (lower is better) Translates to: ATLQLSHVDVSI*LNSLNHLHRYS Trigger: AGAATATCTGTGTAGATGGTTCAAGCTGTTAAGTCAGATACTGACATCTACATGACTCAACTGCAGTGTAGC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR TCA 72 bp | GGCGAGAGAGAAAGACAGCCAAACCAATTCATAGAGTaGTGCTTTGCCCATATTGAAAACATTGTAATGAAA | + |
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Preference number: 3 (lower is better) Translates to: GERERQPNQFIE*CFAHIENIVMK Trigger: TTTCATTACAATGTTTTCAATATGGGCAAAGCATCACTCTATGAATTGGTTTGGCTGTCTTTCTCTCTCGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR TCA 72 bp | ATTAATCTACCTGTGTTCTATGTGGCTGTGTTAGAATaGCTCAGCATGAACAGACTAGAAGTAAAATACTAT | + |
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Preference number: 3 (lower is better) Translates to: INLPVFYVAVLE*LSMNRLEVKYY Trigger: ATAGTATTTTACTTCTAGTCTGTTCATGCTGAGTCATTCTAACACAGCCACATAGAACACAGGTAGATTAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR CCA 72 bp | TATGATACATTCATACAGCAATTACCATCAATGTTTTaGGGGAGGGCAAAGTTGAAAGGTTTAGACTTTATA | + |
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Preference number: 3 (lower is better) Translates to: YDTFIQQLPSMF*GRAKLKGLDFI Trigger: TATAAAGTCTAAACCTTTCAACTTTGCCCTCCCCCAAAACATTGATGGTAATTGCTGTATGAATGTATCATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR GCA 90 bp | AGTCCCTTTTACAAATATCCTTGCAGAGATGCCCACGGAGTCAGAAACAAGAACAGTCCCGCTCCCCTCTaGTGTGGTCTCCCAATGTCT | + |
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Preference number: 4 (lower is better) Translates to: SPFYKYPCRDAHGVRNKNSPAPL*CGLPMS Trigger: AGACATTGGGAGACCACAGCAGAGGGGAGCGGGACT...GTTCTTGTTTCTGACTCCGTGGGCATCTCTGCAAGGATATTTGTAAAAGGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR TCA 90 bp | AAGACAGGGCATTATTATGCCCGTGACTCAGCTCATTTTACCTGCACAGGTAACATTTCCTCAGGGGCCTaGAGTCCTTCATGTCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: KTGHYYARDSAHFTCTGNISSGA*SPSCLG Trigger: CCCTAGACATGAAGGACTTCAGGCCCCTGAGGAAAT...GTTACCTGTGCAGGTAAAATGAGCTGAGTCACGGGCATAATAATGCCCTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR GCA 90 bp | CCATTCTCAACTAAAAGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTGGCCTAGACTGCTCTaGTTCGTGGCCCTGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: PFSTKRFYGLYSLISIVLWPRLL*FVALIQ Trigger: CTGGATCAGGGCCACGAAGCAGAGCAGTCTAGGCCA...CAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCTTTTAGTTGAGAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR TCA 90 bp | AAAGCTGAAGTGCATGGCAAGGAGCTTCATCTTTCCCTTGTGCATCCTAAAGAGAGAGGCCACTTAGAATaGATGGTCTGTGGCCTAGAC | + |
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Preference number: 4 (lower is better) Translates to: KAEVHGKELHLSLVHPKERGHLE*MVCGLD Trigger: GTCTAGGCCACAGACCATTCATTCTAAGTGGCCTCT...CTCTTTAGGATGCACAAGGGAAAGATGAAGCTCCTTGCCATGCACTTCAGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR GCA 90 bp | AAGACAGGGCATTATTATGCCCGTGACTCAGCTCATTTTACCTGCACAGGTAACCTGTCACAATGGGCTTaGTCTCAGGTAAGGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: KTGHYYARDSAHFTCTGNLSQWA*SQVRHC Trigger: ACAGTGCCTTACCTGAGAGCAAGCCCATTGTGACAG...GTTACCTGTGCAGGTAAAATGAGCTGAGTCACGGGCATAATAATGCCCTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR GCA 90 bp | AAAGCTGAAGTGCATGGCAAGGAGCTTCATCTTTCCCTTGTGCATCCTAAAGAGACTCCACCTACTGCCTaGTGGCCCAGCATTAAATAC | + |
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Preference number: 4 (lower is better) Translates to: KAEVHGKELHLSLVHPKETPPTA*WPSIKY Trigger: GTATTTAATGCTGGGCCAGCAGGCAGTAGGTGGAGT...CTCTTTAGGATGCACAAGGGAAAGATGAAGCTCCTTGCCATGCACTTCAGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR CCA 90 bp | AGTCCCTTTTACAAATATCCTTGCAGAGATGCCCACGGAGTCAGAAACAAGAACAGCACTGGAGTTAGATaGCATCACATGGGCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SPFYKYPCRDAHGVRNKNSTGVR*HHMGSG Trigger: CCCACTGCCCATGTGATGCCATCTAACTCCAGTGCT...GTTCTTGTTTCTGACTCCGTGGGCATCTCTGCAAGGATATTTGTAAAAGGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR TCA 90 bp | AGTCCCTTTTACAAATATCCTTGCAGAGATGCCCACGGAGTCAGAAACAAGAACCTAAAGTCTGTCTCCTaGGAGCAGAGGAAGAGACTC | + |
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Preference number: 4 (lower is better) Translates to: SPFYKYPCRDAHGVRNKNLKSVS*EQRKRL Trigger: GAGTCTCTTCCTCTGCTCTCAGGAGACAGACTTTAG...GTTCTTGTTTCTGACTCCGTGGGCATCTCTGCAAGGATATTTGTAAAAGGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR CCA 90 bp | AGTCCCTTTTACAAATATCCTTGCAGAGATGCCCACGGAGTCAGAAACAAGAACTGCTCAAGTTCTTCTTaGTGGGGATGGGACAATGGC | + |
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Preference number: 4 (lower is better) Translates to: SPFYKYPCRDAHGVRNKNCSSSS*WGWDNG Trigger: GCCATTGTCCCATCCCCACCAAGAAGAACTTGAGCA...GTTCTTGTTTCTGACTCCGTGGGCATCTCTGCAAGGATATTTGTAAAAGGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR CCA 90 bp | AAGACAGGGCATTATTATGCCCGTGACTCAGCTCATTTTACCTGCACAGGTAACATTTCGATGGTTAGATaGAACAGCTGTGGCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: KTGHYYARDSAHFTCTGNISMVR*NSCGLP Trigger: TGGCAGGCCACAGCTGTTCCATCTAACCATCGAAAT...GTTACCTGTGCAGGTAAAATGAGCTGAGTCACGGGCATAATAATGCCCTGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR TCA 90 bp | AGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTGTAAGAAAAGTGGGAAGTTTGGACAAAGATaGCCATTTCCTCAGGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RFYGLYSLISIVLCKKSGKFGQR*PFPQGP Trigger: AGGCCCCTGAGGAAATGGTCATCTTTGTCCAAACTT...CCCACTTTTCTTACACAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR TCA 90 bp | AGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTGTAAGAAAAGTGGGCAGAGGAAGAGACTCTaGCATCTTCTTTGTTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RFYGLYSLISIVLCKKSGQRKRL*HLLCCS Trigger: GCTGCAACAAAGAAGATGTCAGAGTCTCTTCCTCTG...CCCACTTTTCTTACACAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR TCA 90 bp | AAGACAGGGCATTATTATGCCCGTGACTCAGCTCATTTTACCTGCACAGGTAACCCACTTGAAGTTGAATaGTCTTCCACGCTGTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: KTGHYYARDSAHFTCTGNPLEVE*SSTLSE Trigger: TTCTGACAGCGTGGAAGATCATTCAACTTCAAGTGG...GTTACCTGTGCAGGTAAAATGAGCTGAGTCACGGGCATAATAATGCCCTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR CCA 90 bp | AGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTGTAAGAAAAGTGGGATGTCCCTCCGTAACTaGCACACATCTGAGAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: RFYGLYSLISIVLCKKSGMSLRN*HTSESF Trigger: AAAGCTCTCAGATGTGTGCCAGTTACGGAGGGACAT...CCCACTTTTCTTACACAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR TCA 90 bp | CTTTCCCTTGTGCATCCTAAAGAGAAACAAAGGATTCAACACAGCAGCATTTCAGTCCTCACAGAAGGTTaGATGGGAACTCCACCTACT | + |
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Preference number: 4 (lower is better) Translates to: LSLVHPKEKQRIQHSSISVLTEG*MGTPPT Trigger: AGTAGGTGGAGTTCCCATTCAACCTTCTGTGAGGAC...TGAAATGCTGCTGTGTTGAATCCTTTGTTTCTCTTTAGGATGCACAAGGGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR GCA 90 bp | AGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTGTAAGAAAAGTGGGAACAAGAAGTGCCAATaGCAGTGTCTCCACTATCAG | + |
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Preference number: 4 (lower is better) Translates to: RFYGLYSLISIVLCKKSGNKKCQ*QCLHYQ Trigger: CTGATAGTGGAGACACTGGCATTGGCACTTCTTGTT...CCCACTTTTCTTACACAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR GCA 90 bp | CCATTCTCAACTAAAAGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTGTCAGAACAAGAAGTaGCAATGCCAGTGTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: PFSTKRFYGLYSLISIVLCQNKK*QCQCLH Trigger: GTGGAGACACTGGCATTGGCACTTCTTGTTCTGACA...CAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCTTTTAGTTGAGAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR CCA 90 bp | AGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTGTAAGAAAAGTGGGGAGATTCCCTATGTTTaGAAACGGAAGCACTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: RFYGLYSLISIVLCKKSGEIPYV*KRKHWS Trigger: ACTCCAGTGCTTCCGTTTCCAAACATAGGGAATCTC...CCCACTTTTCTTACACAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR CCA 90 bp | CCATTCTCAACTAAAAGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGAGAATGAATGGTCTGTaGCCTAGACTGCTCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PFSTKRFYGLYSLISIVLRMNGL*PRLLCF Trigger: GAAGCAGAGCAGTCTAGGCCACAGACCATTCATTCT...CAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCTTTTAGTTGAGAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| 3UTR CAA 72 bp | CACCCTTTAATGAAACAGTCCCTTTTACAAATATCCTaGCAGAGATGCCCACGGAGTCAGAAACAAGAACGG | + |
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Preference number: 4 (lower is better) Translates to: HPLMKQSLLQIS*QRCPRSQKQER Trigger: CCGTTCTTGTTTCTGACTCCGTGGGCATCTCTGCAAGGATATTTGTAAAAGGGACTGTTTCATTAAAGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR TCA 90 bp | AGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTGTAAGAAAAGTGGGATAACTCTGACGAGATaGTCCAGTCAAAACCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: RFYGLYSLISIVLCKKSGITLTR*SSQNLH Trigger: ATGCAGGTTTTGACTGGATCATCTCGTCAGAGTTAT...CCCACTTTTCTTACACAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR GCA 90 bp | CTTTCCCTTGTGCATCCTAAAGAGAAACAAAGGATTCAACACAGCAGCATTTCATGGTCTCCCAATGTCTaGATGAGGCTAGTACTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LSLVHPKEKQRIQHSSISWSPNV*MRLVLH Trigger: ATGGAGTACTAGCCTCATGCAGACATTGGGAGACCA...TGAAATGCTGCTGTGTTGAATCCTTTGTTTCTCTTTAGGATGCACAAGGGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR GCA 90 bp | CTTTCCCTTGTGCATCCTAAAGAGAAACAAAGGATTCAACACAGCAGCATTTCAGGATGGGACAATGGCTaGTCTGTAAATAGACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLVHPKEKQRIQHSSISGWDNG*SVNRLW Trigger: CCAGAGTCTATTTACAGAGCAGCCATTGTCCCATCC...TGAAATGCTGCTGTGTTGAATCCTTTGTTTCTCTTTAGGATGCACAAGGGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR GCA 90 bp | AAGACAGGGCATTATTATGCCCGTGACTCAGCTCATTTTACCTGCACAGGTAACCTGGCTGTTGCATTCTaGTCTCTCAGATTATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KTGHYYARDSAHFTCTGNLAVAF*SLRLSF Trigger: AAATGATAATCTGAGAGAGCAGAATGCAACAGCCAG...GTTACCTGTGCAGGTAAAATGAGCTGAGTCACGGGCATAATAATGCCCTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCCTTTTACAAATATCCTTGCAGAGATGCCCACGGAGTCAGAAACAAGAACTATCTTGCTGGCTGTTaGATTCTGCTCTCTCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SPFYKYPCRDAHGVRNKNYLAGC*ILLSQI Trigger: AATCTGAGAGAGCAGAATGCAACAGCCAGCAAGATA...GTTCTTGTTTCTGACTCCGTGGGCATCTCTGCAAGGATATTTGTAAAAGGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR GCA 90 bp | GAAACAAGAACGGTACTGGACATGAGCTTCCAAGTTAGAACTGTCCAATATCCAGGAACAGCTGTGGCCTaGCATAATGATTCATTACCA | + |
|
Preference number: 4 (lower is better) Translates to: ETRTVLDMSFQVRTVQYPGTAVA*HNDSLP Trigger: TGGTAATGAATCATTATGGCAGGCCACAGCTGTTCC...TGGATATTGGACAGTTCTAACTTGGAAGCTCATGTCCAGTACCGTTCTTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CCA 90 bp | CCATTCTCAACTAAAAGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTCTCCCATCTGTCTTTaGTTTTCAAGCAGCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFSTKRFYGLYSLISIVLSPICL*FSSSAS Trigger: AGAAGCGCTGCTTGAAAACCAAAGACAGATGGGAGA...CAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCTTTTAGTTGAGAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCCTTTTACAAATATCCTTGCAGAGATGCCCACGGAGTCAGAAACAAGAACAGGTGGTTATTTCGATaGTTAGATGGAACAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPFYKYPCRDAHGVRNKNRWLFR*LDGTAV Trigger: CACAGCTGTTCCATCTAACCATCGAAATAACCACCT...GTTCTTGTTTCTGACTCCGTGGGCATCTCTGCAAGGATATTTGTAAAAGGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGAAGTGCATGGCAAGGAGCTTCATCTTTCCCTTGTGCATCCTAAAGAGCTGTGTCTTCTGAGGTaGTTATTTCGATGGTTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KAEVHGKELHLSLVHPKELCLLR*LFRWLD Trigger: ATCTAACCATCGAAATAACCACCTCAGAAGACACAG...CTCTTTAGGATGCACAAGGGAAAGATGAAGCTCCTTGCCATGCACTTCAGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CCA 90 bp | CCATTCTCAACTAAAAGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTTTAGTGAGCGTTTCTaGGCTGTGGTCATTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PFSTKRFYGLYSLISIVLFSERF*AVVIFS Trigger: ACTGAAAATGACCACAGCCCAGAAACGCTCACTAAA...CAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCTTTTAGTTGAGAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR TCA 90 bp | TTTGTTCTTTTTCTTGCAGACCTTAGTAACGTGATGTGTTTGCCTGATTTGATCCTGATTCCCATTTACTaGAATCCTGGAAGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FVLFLADLSNVMCLPDLILIPIY*NPGSQE Trigger: CTCCTGGCTTCCAGGATTTCAGTAAATGGGAATCAG...GATCAAATCAGGCAAACACATCACGTTACTAAGGTCTGCAAGAAAAAGAACAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCCCTTGTGCATCCTAAAGAGAAACAAAGGATTCAACACAGCAGCATTTCATTATGCTGTGTCTTCTaGGGTGGTTATTTCGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLVHPKEKQRIQHSSISLCCVF*GGYFDG Trigger: ACCATCGAAATAACCACCTCAGAAGACACAGCATAA...TGAAATGCTGCTGTGTTGAATCCTTTGTTTCTCTTTAGGATGCACAAGGGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CCA 90 bp | AGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTGTAAGAAAAGTGGGTTAATTTCATCCTGCTaGCTCTCTATTATCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RFYGLYSLISIVLCKKSGLISSC*LSIILL Trigger: CAGCAAGATAATAGAGAGCCAGCAGGATGAAATTAA...CCCACTTTTCTTACACAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCCCTTGTGCATCCTAAAGAGAAACAAAGGATTCAACACAGCAGCATTTCATCTTTTTCAGGCTGCTaGTGTATCTATCTCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLVHPKEKQRIQHSSISSFSGC*CIYLWF Trigger: AAACCAGAGATAGATACATCAGCAGCCTGAAAAAGA...TGAAATGCTGCTGTGTTGAATCCTTTGTTTCTCTTTAGGATGCACAAGGGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR TCA 90 bp | CCATTCTCAACTAAAAGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTGCACTTCTTTATCTTaGCATTGCTTCTTAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PFSTKRFYGLYSLISIVLCTSLS*HCFLIS Trigger: GGAGATTAAGAAGCAATGTCAAGATAAAGAAGTGCA...CAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCTTTTAGTTGAGAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR TCA 90 bp | CCATTCTCAACTAAAAGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGAATATGACATTTCCTTaGACAGCTGATCAATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PFSTKRFYGLYSLISIVLNMTFP*TADQSQ Trigger: CTGTGATTGATCAGCTGTTCAAGGAAATGTCATATT...CAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCTTTTAGTTGAGAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR TCA 90 bp | TTTGTTCTTTTTCTTGCAGACCTTAGTAACGTGATGTGTTTGCCTGATTTGATCCTGAGCATAGCGGTCTaGTATTGTAGTCCTCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: FVLFLADLSNVMCLPDLILSIAV*YCSPQF Trigger: GAATTGAGGACTACAATATCAGACCGCTATGCTCAG...GATCAAATCAGGCAAACACATCACGTTACTAAGGTCTGCAAGAAAAAGAACAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCCTTTTACAAATATCCTTGCAGAGATGCCCACGGAGTCAGAAACAAGAACATTACAATTTCCTTCTaGCTCAGAAGTCCTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPFYKYPCRDAHGVRNKNITISF*LRSPSF Trigger: AAAAGAAGGACTTCTGAGGCAGAAGGAAATTGTAAT...GTTCTTGTTTCTGACTCCGTGGGCATCTCTGCAAGGATATTTGTAAAAGGGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTTCTTTTTCTTGCAGACCTTAGTAACGTGATGTGTTTGCCTGATTTGATCGGCTCTCTATTATCTTaGTGGCTGTTGCATTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FVLFLADLSNVMCLPDLIGSLLS*WLLHSA Trigger: AGCAGAATGCAACAGCCAGCAAGATAATAGAGAGCC...GATCAAATCAGGCAAACACATCACGTTACTAAGGTCTGCAAGAAAAAGAACAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTTCTTTTTCTTGCAGACCTTAGTAACGTGATGTGTTTGCCTGATTTGATCAGCGTTTCTGGGCTGTaGTCATTTTCAGTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FVLFLADLSNVMCLPDLISVSGL*SFSVSS Trigger: TGAAGAGACTGAAAATGACCACAGCCCAGAAACGCT...GATCAAATCAGGCAAACACATCACGTTACTAAGGTCTGCAAGAAAAAGAACAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTTCTTTTTCTTGCAGACCTTAGTAACGTGATGTGTTTGCCTGATTTGATCGTAGATGCTAGCTTTTaGTCAAGTTCTTCTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FVLFLADLSNVMCLPDLIVDASF*SSSSWW Trigger: CCACCAAGAAGAACTTGAGCAAAAGCTAGCATCTAC...GATCAAATCAGGCAAACACATCACGTTACTAAGGTCTGCAAGAAAAAGAACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCTTGTGCATCCTAAAGAGAAACAAAGGATTCAACACAGCAGCATTTCAAGAAACTCATTGAGCTaGAAAACTTCTTTCTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLVHPKEKQRIQHSSISRNSLS*KTSFSV Trigger: TACTGAGAAAGAAGTTTTGCAGCTCAATGAGTTTCT...TGAAATGCTGCTGTGTTGAATCCTTTGTTTCTCTTTAGGATGCACAAGGGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCCCTTGTGCATCCTAAAGAGAAACAAAGGATTCAACACAGCAGCATTTCAATCCTTTCATGTAAGTaGTTAATTTGTTGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLVHPKEKQRIQHSSISILSCK*LICCFC Trigger: GCAGAAGCAACAAATTAACCACTTACATGAAAGGAT...TGAAATGCTGCTGTGTTGAATCCTTTGTTTCTCTTTAGGATGCACAAGGGAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| 3UTR CAA 72 bp | AAATCCCCTCCAAAGCTGACTATGTGCCAAAGCCCTTaGTTAATTCTAGACTCGAATAAGAGATTAGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: KSPPKLTMCQSP*LILDSNKRLVF Trigger: AAATACTAATCTCTTATTCGAGTCTAGAATTAACAAAGGGCTTTGGCACATAGTCAGCTTTGGAGGGGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS GCA 90 bp | AAAGGCTTGCCCTTCCCTGTCATCTCCAAGCTATTCCTCAGCTCTTaGGGGTATGCAATGCCACTGTGGTTGCGGGTATCTGGGGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KGLPFPVISKLFLSS*GYAMPLWLRVSGAV Trigger: TACTGCCCCAGATACCCGCAACCACAGTGGCATTGCATACCCGCAAGAGCTGAGGAATAGCTTGGAGATGACAGGGAAGGGCAAGCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS CCA 90 bp | CTGAAGTCCTTCATGTCTAGGGAGGAGTCCCGCTCCCCTCTGCTGTaGTCTCCCAATGTCTGCATGAGGCTAGTACTCCATTTAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LKSFMSREESRSPLL*SPNVCMRLVLHLEP Trigger: TGGCTCTAAATGGAGTACTAGCCTCATGCAGACATTGGGAGACCACAGCAGAGGGGAGCGGGACTCCTCCCTAGACATGAAGGACTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS GCA 90 bp | GTGGCTGTTGCCAAGGAGCTAAACTGTAAGAATCGTCTGTGGTTCTaGCTTCCAATGGGTTTGTCCGTAACTGCTCTGTCAGCCACATCT | + |
|
Preference number: 5 (lower is better) Translates to: VAVAKELNCKNRLWF*LPMGLSVTALSATS Trigger: AGATGTGGCTGACAGAGCAGTTACGGACAAACCCATTGGAAGGCAGAACCACAGACGATTCTTACAGTTTAGCTCCTTGGCAACAGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS CCA 90 bp | ATCTCCAAGCTATTCCTCAGCTCTTGCGGGTATGCAATGCCACTGTaGTTGCGGGTATCTGGGGCAGTAAGTTTGGACAAAGATGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: ISKLFLSSCGYAMPL*LRVSGAVSLDKDDH Trigger: ATGGTCATCTTTGTCCAAACTTACTGCCCCAGATACCCGCAACCACAGTGGCATTGCATACCCGCAAGAGCTGAGGAATAGCTTGGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS CCA 90 bp | CAGTTTGTGGCTGTTGCCAAGGAGCTAAACTGTAAGAATCGTCTGTaGTTCTGCCTTCCAATGGGTTTGTCCGTAACTGCTCTGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QFVAVAKELNCKNRL*FCLPMGLSVTALSA Trigger: GGCTGACAGAGCAGTTACGGACAAACCCATTGGAAGGCAGAACCACAGACGATTCTTACAGTTTAGCTCCTTGGCAACAGCCACAAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS-3UTR CAA 90 bp | AAGACAGGGCATTATTATGCCCGTGACTCAGCTCATTTTACCTGCACAGGTAACCCTGTCACAATGGGCTaGCTCTCAGGTAAGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: KTGHYYARDSAHFTCTGNPVTMG*LSGKAL Trigger: CAGTGCCTTACCTGAGAGCAAGCCCATTGTGACAGG...GTTACCTGTGCAGGTAAAATGAGCTGAGTCACGGGCATAATAATGCCCTGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CAA 90 bp | AAGACAGGGCATTATTATGCCCGTGACTCAGCTCATTTTACCTGCACAGGTAACTGGGACATAAAAGGCTaGCCCTTCCCTGTCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KTGHYYARDSAHFTCTGNWDIKG*PFPVIS Trigger: GGAGATGACAGGGAAGGGCAAGCCTTTTATGTCCCA...GTTACCTGTGCAGGTAAAATGAGCTGAGTCACGGGCATAATAATGCCCTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS CCA 90 bp | TTCTCAGTAGATGCTAGCTTTTGCTCAAGTTCTTCTTGGTGGGGATaGGACAATGGCTGCTCTGTAAATAGACTCTGGCCTGAACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSVDASFCSSSSWWG*DNGCSVNRLWPELL Trigger: GAGCAGTTCAGGCCAGAGTCTATTTACAGAGCAGCCATTGTCCCATCCCCACCAAGAAGAACTTGAGCAAAAGCTAGCATCTACTGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS CCA 90 bp | CGGTCTGATATTGTAGTCCTCAATTCATCAATGTCCCTCCGTAACTaGCACACATCTGAGAGCTTTTTAGTGAGCGTTTCTGGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSDIVVLNSSMSLRN*HTSESFLVSVSGLW Trigger: CCACAGCCCAGAAACGCTCACTAAAAAGCTCTCAGATGTGTGCCAGTTACGGAGGGACATTGATGAATTGAGGACTACAATATCAGACCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS GCA 90 bp | TGCCACTTGAAGTTGAATGATCTTCCACGCTGTCAGAACAAGAAGTaGCAATGCCAGTGTCTCCACTATCAGACGTTATGCTGTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CHLKLNDLPRCQNKK*QCQCLHYQTLCCVF Trigger: GAAGACACAGCATAACGTCTGATAGTGGAGACACTGGCATTGGCACTTCTTGTTCTGACAGCGTGGAAGATCATTCAACTTCAAGTGGCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CAA 90 bp | AGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTGTAAGAAAAGTGGGAGTCCTCACAGAAGGTaGAATGGGAACTCCACCTAC | + |
|
Preference number: 5 (lower is better) Translates to: RFYGLYSLISIVLCKKSGSPHRR*NGNSTY Trigger: GTAGGTGGAGTTCCCATTCAACCTTCTGTGAGGACT...CCCACTTTTCTTACACAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CAA 90 bp | AGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTGTAAGAAAAGTGGGTTGCTCAAGTTCTTCTaGGTGGGGATGGGACAATGG | + |
|
Preference number: 5 (lower is better) Translates to: RFYGLYSLISIVLCKKSGLLKFF*VGMGQW Trigger: CCATTGTCCCATCCCCACCAAGAAGAACTTGAGCAA...CCCACTTTTCTTACACAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CAA 90 bp | AGTCCCTTTTACAAATATCCTTGCAGAGATGCCCACGGAGTCAGAAACAAGAACGTACGTCATCTAGAGTaGGAAGGTCTGCCAGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: SPFYKYPCRDAHGVRNKNVRHLE*EGLPGT Trigger: AGTACCTGGCAGACCTTCCAACTCTAGATGACGTAC...GTTCTTGTTTCTGACTCCGTGGGCATCTCTGCAAGGATATTTGTAAAAGGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS GCA 90 bp | AATACTTTGGAGACTCAAAAGTCTCTGAGCCTGTCACAATGGGCTTaGTCTCAGGTAAGGCACTGTATGTCATGTCTAAAGTCTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NTLETQKSLSLSQWA*SQVRHCMSCLKSVS Trigger: GGAGACAGACTTTAGACATGACATACAGTGCCTTACCTGAGAGCAAGCCCATTGTGACAGGCTCAGAGACTTTTGAGTCTCCAAAGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS CCA 90 bp | ACTTCTTTCTCAGTAGATGCTAGCTTTTGCTCAAGTTCTTCTTGGTaGGGATGGGACAATGGCTGCTCTGTAAATAGACTCTGGCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSFSVDASFCSSSSW*GWDNGCSVNRLWPE Trigger: TTCAGGCCAGAGTCTATTTACAGAGCAGCCATTGTCCCATCCCCACCAAGAAGAACTTGAGCAAAAGCTAGCATCTACTGAGAAAGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS TCA 90 bp | TTGCTGGCTGTTGCATTCTGCTCTCTCAGATTATCATTTTCACTCTaGAGCTGTTTGGCATCTAACATGGGAAGGCGGATTCCATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLAVAFCSLRLSFSL*SCLASNMGRRIPSS Trigger: TGAAGATGGAATCCGCCTTCCCATGTTAGATGCCAAACAGCTTCAGAGTGAAAATGATAATCTGAGAGAGCAGAATGCAACAGCCAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS CCA 90 bp | AACTGGCACACATCTGAGAGCTTTTTAGTGAGCGTTTCTGGGCTGTaGTCATTTTCAGTCTCTTCAGCTGAACAGTTCATTGATCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: NWHTSESFLVSVSGL*SFSVSSAEQFIDRI Trigger: AATCCGATCAATGAACTGTTCAGCTGAAGAGACTGAAAATGACCACAGCCCAGAAACGCTCACTAAAAAGCTCTCAGATGTGTGCCAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS CCA 90 bp | CCACTATCAGACGTTATGCTGTGTCTTCTGAGGTGGTTATTTCGATaGTTAGATGGAACAGCTGTGGCCTGCCATAATGATTCATTACCA | + |
|
Preference number: 5 (lower is better) Translates to: PLSDVMLCLLRWLFR*LDGTAVACHNDSLP Trigger: TGGTAATGAATCATTATGGCAGGCCACAGCTGTTCCATCTAACCATCGAAATAACCACCTCAGAAGACACAGCATAACGTCTGATAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS TCA 90 bp | GCCTCAGAAGTCCTTCTTTTATTTTCAGCACTGATTCCCATTTACTaGAATCCTGGAAGCCAGGAGGTGAATAACTCTGACGAGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: ASEVLLLFSALIPIY*NPGSQEVNNSDEMI Trigger: GATCATCTCGTCAGAGTTATTCACCTCCTGGCTTCCAGGATTTCAGTAAATGGGAATCAGTGCTGAAAATAAAAGAAGGACTTCTGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS CCA 90 bp | GCATTAAATACTTTGGAGACTCAAAAGTCTCTGAGCCTGTCACAATaGGCTTGCTCTCAGGTAAGGCACTGTATGTCATGTCTAAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALNTLETQKSLSLSQ*ACSQVRHCMSCLKS Trigger: AGACTTTAGACATGACATACAGTGCCTTACCTGAGAGCAAGCCCATTGTGACAGGCTCAGAGACTTTTGAGTCTCCAAAGTATTTAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS-3UTR CAA 90 bp | GAAACAAGAACGGTACTGGACATGAGCTTCCAAGTTAGAACTGTCCAATATCCATCTGGGGCAGTAAGTTaGGACAAAGATGACCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: ETRTVLDMSFQVRTVQYPSGAVS*DKDDHF Trigger: GAAATGGTCATCTTTGTCCAAACTTACTGCCCCAGA...TGGATATTGGACAGTTCTAACTTGGAAGCTCATGTCCAGTACCGTTCTTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCCCTTGTGCATCCTAAAGAGAAACAAAGGATTCAACACAGCAGCATTTCATGGCGTCTCACTTCCTaGCTGAAACTCTTCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSLVHPKEKQRIQHSSISWRLTS*LKLFSL Trigger: CAAACTGAAGAGTTTCAGCAAGGAAGTGAGACGCCA...TGAAATGCTGCTGTGTTGAATCCTTTGTTTCTCTTTAGGATGCACAAGGGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CAA 90 bp | CCATTCTCAACTAAAAGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGCTCCTCTGCTTCTCTTaGTTTTGCTCAGATTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PFSTKRFYGLYSLISIVLLLCFS*FCSDSF Trigger: GAAGGAATCTGAGCAAAACAAAGAGAAGCAGAGGAG...CAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCTTTTAGTTGAGAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCCCTTGTGCATCCTAAAGAGAAACAAAGGATTCAACACAGCAGCATTTCATGGCTCTCTATTATCTaGCTGGCTGTTGCATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSLVHPKEKQRIQHSSISWLSII*LAVAFC Trigger: GCAGAATGCAACAGCCAGCAAGATAATAGAGAGCCA...TGAAATGCTGCTGTGTTGAATCCTTTGTTTCTCTTTAGGATGCACAAGGGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CAA 90 bp | AAGACAGGGCATTATTATGCCCGTGACTCAGCTCATTTTACCTGCACAGGTAACAAGATAACGTGCCACTaGAAGTTGAATGATCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KTGHYYARDSAHFTCTGNKITCH*KLNDLP Trigger: TGGAAGATCATTCAACTTCAAGTGGCACGTTATCTT...GTTACCTGTGCAGGTAAAATGAGCTGAGTCACGGGCATAATAATGCCCTGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CAA 90 bp | AGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTGTAAGAAAAGTGGGCCAGCATTAAATACTTaGGAGACTCAAAAGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RFYGLYSLISIVLCKKSGPALNT*ETQKSL Trigger: CAGAGACTTTTGAGTCTCCAAAGTATTTAATGCTGG...CCCACTTTTCTTACACAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR CAA 90 bp | TTTGTTCTTTTTCTTGCAGACCTTAGTAACGTGATGTGTTTGCCTGATTTGATCCTGAAACTCTTCAGTTaGTGGCTGTTGCCAAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FVLFLADLSNVMCLPDLILKLFS*WLLPRS Trigger: GCTCCTTGGCAACAGCCACAAACTGAAGAGTTTCAG...GATCAAATCAGGCAAACACATCACGTTACTAAGGTCTGCAAGAAAAAGAACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CAA 90 bp | CCATTCTCAACTAAAAGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTGGCTTATTCGTTGTTaGAGAAACTCATTGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PFSTKRFYGLYSLISIVLWLIRC*RNSLSC Trigger: GCAGCTCAATGAGTTTCTCAAACAACGAATAAGCCA...CAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCTTTTAGTTGAGAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR CAA 90 bp | GAAACAAGAACGGTACTGGACATGAGCTTCCAAGTTAGAACTGTCCAATATCCACTTGCCCTGAGCACGTaGATTAAGAATACTACACAA | + |
|
Preference number: 5 (lower is better) Translates to: ETRTVLDMSFQVRTVQYPLALST*IKNTTQ Trigger: TTGTGTAGTATTCTTAATCAACGTGCTCAGGGCAAG...TGGATATTGGACAGTTCTAACTTGGAAGCTCATGTCCAGTACCGTTCTTGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS CCA 90 bp | TTGCATTCTGCTCTCTCAGATTATCATTTTCACTCTGAAGCTGTTTaGCATCTAACATGGGAAGGCGGATTCCATCTTCAAGGCATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LHSALSDYHFHSEAV*HLTWEGGFHLQGIF Trigger: AAAAATGCCTTGAAGATGGAATCCGCCTTCCCATGTTAGATGCCAAACAGCTTCAGAGTGAAAATGATAATCTGAGAGAGCAGAATGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS-3UTR CAA 90 bp | TTTGTTCTTTTTCTTGCAGACCTTAGTAACGTGATGTGTTTGCCTGATTTGATCACGTGCCACTTGAAGTaGAATGATCTTCCACGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FVLFLADLSNVMCLPDLITCHLK*NDLPRC Trigger: ACAGCGTGGAAGATCATTCAACTTCAAGTGGCACGT...GATCAAATCAGGCAAACACATCACGTTACTAAGGTCTGCAAGAAAAAGAACAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CAA 90 bp | CCATTCTCAACTAAAAGGTTCTACGGCCTTTACTCTCTCATCTCTATAGTCCTGTGTTTGAGAAACTCATaGAGCTGCAAAACTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PFSTKRFYGLYSLISIVLCLRNS*SCKTSF Trigger: GAAAGAAGTTTTGCAGCTCAATGAGTTTCTCAAACA...CAGGACTATAGAGATGAGAGAGTAAAGGCCGTAGAACCTTTTAGTTGAGAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCCCTTGTGCATCCTAAAGAGAAACAAAGGATTCAACACAGCAGCATTTCAATTTGCAGTCCAGAGTaGATGACCGCTTTTTATTTA | + |
|
Preference number: 5 (lower is better) Translates to: LSLVHPKEKQRIQHSSISICSPE*MTAFYL Trigger: TAAATAAAAAGCGGTCATCAACTCTGGACTGCAAAT...TGAAATGCTGCTGTGTTGAATCCTTTGTTTCTCTTTAGGATGCACAAGGGAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS-3UTR CAA 90 bp | CTTTCCCTTGTGCATCCTAAAGAGAAACAAAGGATTCAACACAGCAGCATTTCACTTCTCTTCACTAAATaGGCTTATTCGTTGTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSLVHPKEKQRIQHSSISLLFTK*AYSLFE Trigger: CTCAAACAACGAATAAGCCAATTTAGTGAAGAGAAG...TGAAATGCTGCTGTGTTGAATCCTTTGTTTCTCTTTAGGATGCACAAGGGAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS GCA 90 bp | TCTTCACTAAATTGGCTTATTCGTTGTTTGAGAAACTCATTGAGCTaGAAAACTTCTTTCTCAGTAGATGCTAGCTTTTGCTCAAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLNWLIRCLRNSLS*KTSFSVDASFCSSS Trigger: AGAACTTGAGCAAAAGCTAGCATCTACTGAGAAAGAAGTTTTGCAGCTCAATGAGTTTCTCAAACAACGAATAAGCCAATTTAGTGAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS-3UTR CAA 90 bp | TTTGTTCTTTTTCTTGCAGACCTTAGTAACGTGATGTGTTTGCCTGATTTGATCCTCTCAAATTTATATTaGCAGTCCAGAGTTGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: FVLFLADLSNVMCLPDLILSNLY*QSRVDD Trigger: GTCATCAACTCTGGACTGCAAATATAAATTTGAGAG...GATCAAATCAGGCAAACACATCACGTTACTAAGGTCTGCAAGAAAAAGAACAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTTCTTTTTCTTGCAGACCTTAGTAACGTGATGTGTTTGCCTGATTTGATCACTCTGACATCTTCTTaGTTGCAGCTCTCAAATTTA | + |
|
Preference number: 5 (lower is better) Translates to: FVLFLADLSNVMCLPDLITLTSS*LQLSNL Trigger: TAAATTTGAGAGCTGCAACAAAGAAGATGTCAGAGT...GATCAAATCAGGCAAACACATCACGTTACTAAGGTCTGCAAGAAAAAGAACAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS CAA 72 bp | CTGCTCTGTCAGCCACATCTGAGTCCTCACAGAAGGTaGAATGGGAACTCCACCTACTGCCTGCTGGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLCQPHLSPHRR*NGNSTYCLLAQ Trigger: CTGGGCCAGCAGGCAGTAGGTGGAGTTCCCATTCAACCTTCTGTGAGGACTCAGATGTGGCTGACAGAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS GCA 72 bp | TGTCATCTCCAAGCTATTCCTCAGCTCTTGCGGGTATaGAATGCCACTGTGGTTGCGGGTATCTGGGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CHLQAIPQLLRV*NATVVAGIWGS Trigger: ACTGCCCCAGATACCCGCAACCACAGTGGCATTGCATACCCGCAAGAGCTGAGGAATAGCTTGGAGATGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS GCA 72 bp | CCCTTCCCTGTCATCTCCAAGCTATTCCTCAGCTCTTaGGGGTATGCAATGCCACTGTGGTTGCGGGTATCT | + |
|
Preference number: 6 (lower is better) Translates to: PFPVISKLFLSS*GYAMPLWLRVS Trigger: AGATACCCGCAACCACAGTGGCATTGCATACCCGCAAGAGCTGAGGAATAGCTTGGAGATGACAGGGAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS TCA 72 bp | ATGGTCTGTGGCCTAGACTGCTCTGCTTCGTGGCCCTaGTCCAGTAAAGAGTACGTCTCTCCCATCTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: MVCGLDCSASWP*SSKEYVSPICL Trigger: AAGACAGATGGGAGAGACGTACTCTTTACTGGATCAGGGCCACGAAGCAGAGCAGTCTAGGCCACAGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CAA 72 bp | ATGCCACTGTGGTTGCGGGTATCTGGGGCAGTAAGTTaGGACAAAGATGACCATTTCCTCAGGGGCCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MPLWLRVSGAVS*DKDDHFLRGLK Trigger: CTTCAGGCCCCTGAGGAAATGGTCATCTTTGTCCAAACTTACTGCCCCAGATACCCGCAACCACAGTGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CAA 72 bp | CTTGGCCCAAAGGTCCGTAAGTGGGACATAAAAGGCTaGCCCTTCCCTGTCATCTCCAAGCTATTCCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LGPKVRKWDIKG*PFPVISKLFLS Trigger: GCTGAGGAATAGCTTGGAGATGACAGGGAAGGGCAAGCCTTTTATGTCCCACTTACGGACCTTTGGGCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CAA 90 bp | GGGTATGCAATGCCACTGTGGTTGCGGGTATCTGGGGCAGTAAGTTaGGACAAAGATGACCATTTCCTCAGGGGCCTGAAGTCCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: GYAMPLWLRVSGAVS*DKDDHFLRGLKSFM Trigger: CATGAAGGACTTCAGGCCCCTGAGGAAATGGTCATCTTTGTCCAAACTTACTGCCCCAGATACCCGCAACCACAGTGGCATTGCATACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CAA 90 bp | TGTAAGCAACTTGGCCCAAAGGTCCGTAAGTGGGACATAAAAGGCTaGCCCTTCCCTGTCATCTCCAAGCTATTCCTCAGCTCTTGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: CKQLGPKVRKWDIKG*PFPVISKLFLSSCG Trigger: CCCGCAAGAGCTGAGGAATAGCTTGGAGATGACAGGGAAGGGCAAGCCTTTTATGTCCCACTTACGGACCTTTGGGCCAAGTTGCTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CCA 72 bp | TTGGAAACGGAAGCACTGGAGTTAGATGGCATCACATaGGCAGTGGGAAGAGTGACCAATGATCGACTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LETEALELDGIT*AVGRVTNDRLG Trigger: GCCTAGTCGATCATTGGTCACTCTTCCCACTGCCCATGTGATGCCATCTAACTCCAGTGCTTCCGTTTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS CAA 90 bp | TCCAAGCTATTCCTCAGCTCTTGCGGGTATGCAATGCCACTGTGGTaGCGGGTATCTGGGGCAGTAAGTTTGGACAAAGATGACCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: SKLFLSSCGYAMPLW*RVSGAVSLDKDDHF Trigger: GAAATGGTCATCTTTGTCCAAACTTACTGCCCCAGATACCCGCAACCACAGTGGCATTGCATACCCGCAAGAGCTGAGGAATAGCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CAA 90 bp | GAATGGGAACTCCACCTACTGCCTGCTGGCCCAGCATTAAATACTTaGGAGACTCAAAAGTCTCTGAGCCTGTCACAATGGGCTTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: EWELHLLPAGPALNT*ETQKSLSLSQWACS Trigger: AGAGCAAGCCCATTGTGACAGGCTCAGAGACTTTTGAGTCTCCAAAGTATTTAATGCTGGGCCAGCAGGCAGTAGGTGGAGTTCCCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CAA 72 bp | CTCCACCTACTGCCTGCTGGCCCAGCATTAAATACTTaGGAGACTCAAAAGTCTCTGAGCCTGTCACAATGG | + |
|
Preference number: 6 (lower is better) Translates to: LHLLPAGPALNT*ETQKSLSLSQW Trigger: CCATTGTGACAGGCTCAGAGACTTTTGAGTCTCCAAAGTATTTAATGCTGGGCCAGCAGGCAGTAGGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CAA 72 bp | TGTAAGAATCGTCTGTGGTTCTGCCTTCCAATGGGTTaGTCCGTAACTGCTCTGTCAGCCACATCTGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CKNRLWFCLPMG*SVTALSATSES Trigger: GGACTCAGATGTGGCTGACAGAGCAGTTACGGACAAACCCATTGGAAGGCAGAACCACAGACGATTCTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CAA 90 bp | GAGCTAAACTGTAAGAATCGTCTGTGGTTCTGCCTTCCAATGGGTTaGTCCGTAACTGCTCTGTCAGCCACATCTGAGTCCTCACAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ELNCKNRLWFCLPMG*SVTALSATSESSQK Trigger: CTTCTGTGAGGACTCAGATGTGGCTGACAGAGCAGTTACGGACAAACCCATTGGAAGGCAGAACCACAGACGATTCTTACAGTTTAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS GCA 72 bp | GCCAAGGAGCTAAACTGTAAGAATCGTCTGTGGTTCTaGCTTCCAATGGGTTTGTCCGTAACTGCTCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: AKELNCKNRLWF*LPMGLSVTALS Trigger: TGACAGAGCAGTTACGGACAAACCCATTGGAAGGCAGAACCACAGACGATTCTTACAGTTTAGCTCCTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CCA 72 bp | GCTGTTGCCAAGGAGCTAAACTGTAAGAATCGTCTGTaGTTCTGCCTTCCAATGGGTTTGTCCGTAACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AVAKELNCKNRL*FCLPMGLSVTA Trigger: AGCAGTTACGGACAAACCCATTGGAAGGCAGAACCACAGACGATTCTTACAGTTTAGCTCCTTGGCAACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CCA 72 bp | GATGCTAGCTTTTGCTCAAGTTCTTCTTGGTGGGGATaGGACAATGGCTGCTCTGTAAATAGACTCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: DASFCSSSSWWG*DNGCSVNRLWP Trigger: AGGCCAGAGTCTATTTACAGAGCAGCCATTGTCCCATCCCCACCAAGAAGAACTTGAGCAAAAGCTAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CCA 72 bp | TGTCTTTGGTTTTCAAGCAGCGCTTCTGTCAACCTCTaGAGGCTTCCTTCTTTCCTTCCTAGCTCTTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: CLWFSSSASVNL*RLPSFLPSSST Trigger: TGTGGAAGAGCTAGGAAGGAAAGAAGGAAGCCTCCAGAGGTTGACAGAAGCGCTGCTTGAAAACCAAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CAA 90 bp | CTAGTACTCCATTTAGAGCCATCTGGTGTTAGAGATTCCCTATGTTaGGAAACGGAAGCACTGGAGTTAGATGGCATCACATGGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVLHLEPSGVRDSLC*ETEALELDGITWAV Trigger: CACTGCCCATGTGATGCCATCTAACTCCAGTGCTTCCGTTTCCAAACATAGGGAATCTCTAACACCAGATGGCTCTAAATGGAGTACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS TCA 72 bp | TCAATCACAGTCAAATCAAAGAGAGGCCACTTAGAATaGATGGTCTGTGGCCTAGACTGCTCTGCTTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SITVKSKRGHLE*MVCGLDCSASW Trigger: CCACGAAGCAGAGCAGTCTAGGCCACAGACCATTCATTCTAAGTGGCCTCTCTTTGATTTGACTGTGATTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS GCA 72 bp | GAGACTCAAAAGTCTCTGAGCCTGTCACAATGGGCTTaGTCTCAGGTAAGGCACTGTATGTCATGTCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: ETQKSLSLSQWA*SQVRHCMSCLK Trigger: CTTTAGACATGACATACAGTGCCTTACCTGAGAGCAAGCCCATTGTGACAGGCTCAGAGACTTTTGAGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS GCA 72 bp | AATGATCTTCCACGCTGTCAGAACAAGAAGTGCCAATaGCAGTGTCTCCACTATCAGACGTTATGCTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: NDLPRCQNKKCQ*QCLHYQTLCCV Trigger: GACACAGCATAACGTCTGATAGTGGAGACACTGGCATTGGCACTTCTTGTTCTGACAGCGTGGAAGATCATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS CAA 72 bp | GGAGACTCAAAAGTCTCTGAGCCTGTCACAATGGGCTaGCTCTCAGGTAAGGCACTGTATGTCATGTCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: GDSKVSEPVTMG*LSGKALYVMSK Trigger: TTTAGACATGACATACAGTGCCTTACCTGAGAGCAAGCCCATTGTGACAGGCTCAGAGACTTTTGAGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS GCA 72 bp | AAGTTGAATGATCTTCCACGCTGTCAGAACAAGAAGTaGCAATGCCAGTGTCTCCACTATCAGACGTTATGC | + |
|
Preference number: 6 (lower is better) Translates to: KLNDLPRCQNKK*QCQCLHYQTLC Trigger: GCATAACGTCTGATAGTGGAGACACTGGCATTGGCACTTCTTGTTCTGACAGCGTGGAAGATCATTCAACTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS CCA 72 bp | GACGTTATGCTGTGTCTTCTGAGGTGGTTATTTCGATaGTTAGATGGAACAGCTGTGGCCTGCCATAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: DVMLCLLRWLFR*LDGTAVACHND Trigger: ATCATTATGGCAGGCCACAGCTGTTCCATCTAACCATCGAAATAACCACCTCAGAAGACACAGCATAACGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
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| CDS CAA 90 bp | AAATACTTTGGAGACTCAAAAGTCTCTGAGCCTGTCACAATGGGCTaGCTCTCAGGTAAGGCACTGTATGTCATGTCTAAAGTCTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KYFGDSKVSEPVTMG*LSGKALYVMSKVCL Trigger: GAGACAGACTTTAGACATGACATACAGTGCCTTACCTGAGAGCAAGCCCATTGTGACAGGCTCAGAGACTTTTGAGTCTCCAAAGTATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS TCA 72 bp | CTAGGCTTGAAAGATAACGTGCCACTTGAAGTTGAATaGTCTTCCACGCTGTCAGAACAAGAAGTGCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: LGLKDNVPLEVE*SSTLSEQEVPM Trigger: CATTGGCACTTCTTGTTCTGACAGCGTGGAAGATCATTCAACTTCAAGTGGCACGTTATCTTTCAAGCCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS CAA 72 bp | CATTTAGAGCCATCTGGTGTTAGAGATTCCCTATGTTaGGAAACGGAAGCACTGGAGTTAGATGGCATCACA | + |
|
Preference number: 6 (lower is better) Translates to: HLEPSGVRDSLC*ETEALELDGIT Trigger: TGTGATGCCATCTAACTCCAGTGCTTCCGTTTCCAAACATAGGGAATCTCTAACACCAGATGGCTCTAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220443.2 |
||
| CDS TCA 72 bp | GTTGCATTCTGCTCTCTCAGATTATCATTTTCACTCTaGAGCTGTTTGGCATCTAACATGGGAAGGCGGATT | + |
|
Preference number: 6 (lower is better) Translates to: VAFCSLRLSFSL*SCLASNMGRRI Trigger: AATCCGCCTTCCCATGTTAGATGCCAAACAGCTTCAGAGTGAAAATGATAATCTGAGAGAGCAGAATGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS CCA 72 bp | ATTGTAGTCCTCAATTCATCAATGTCCCTCCGTAACTaGCACACATCTGAGAGCTTTTTAGTGAGCGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: IVVLNSSMSLRN*HTSESFLVSVS Trigger: AGAAACGCTCACTAAAAAGCTCTCAGATGTGTGCCAGTTACGGAGGGACATTGATGAATTGAGGACTACAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
||
| CDS CAA 72 bp | CTCCTGAGAGCAGAGGAAGAGACTCTGACATCTTCTTaGTTGCAGCTCTCAAATTTATATTTGCAGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLRAEEETLTSS*LQLSNLYLQSR Trigger: TCTGGACTGCAAATATAAATTTGAGAGCTGCAACAAAGAAGATGTCAGAGTCTCTTCCTCTGCTCTCAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CAA 90 bp | AAAGTCTGTCTCCTGAGAGCAGAGGAAGAGACTCTGACATCTTCTTaGTTGCAGCTCTCAAATTTATATTTGCAGTCCAGAGTTGATGAC | + |
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Preference number: 6 (lower is better) Translates to: KVCLLRAEEETLTSS*LQLSNLYLQSRVDD Trigger: GTCATCAACTCTGGACTGCAAATATAAATTTGAGAGCTGCAACAAAGAAGATGTCAGAGTCTCTTCCTCTGCTCTCAGGAGACAGACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CAA 90 bp | TTATATTTGCAGTCCAGAGTTGATGACCGCTTTTTATTTATTTCCTaGTCTTCCAGCTTAAGCAGCTCCATACTGTCATGTAAGCAACTT | + |
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Preference number: 6 (lower is better) Translates to: LYLQSRVDDRFLFIS*SSSLSSSILSCKQL Trigger: AAGTTGCTTACATGACAGTATGGAGCTGCTTAAGCTGGAAGACAAGGAAATAAATAAAAAGCGGTCATCAACTCTGGACTGCAAATATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CAA 90 bp | TCTAAAATCATTCTGTTAATTTCATCCTGCTGGCTCTCTATTATCTaGCTGGCTGTTGCATTCTGCTCTCTCAGATTATCATTTTCACTC | + |
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Preference number: 6 (lower is better) Translates to: SKIILLISSCWLSII*LAVAFCSLRLSFSL Trigger: GAGTGAAAATGATAATCTGAGAGAGCAGAATGCAACAGCCAGCAAGATAATAGAGAGCCAGCAGGATGAAATTAACAGAATGATTTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS GCA 72 bp | AATTGGCTTATTCGTTGTTTGAGAAACTCATTGAGCTaGAAAACTTCTTTCTCAGTAGATGCTAGCTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: NWLIRCLRNSLS*KTSFSVDASFC Trigger: GCAAAAGCTAGCATCTACTGAGAAAGAAGTTTTGCAGCTCAATGAGTTTCTCAAACAACGAATAAGCCAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CAA 72 bp | TCACTAAATTGGCTTATTCGTTGTTTGAGAAACTCATaGAGCTGCAAAACTTCTTTCTCAGTAGATGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: SLNWLIRCLRNS*SCKTSFSVDAS Trigger: GCTAGCATCTACTGAGAAAGAAGTTTTGCAGCTCAATGAGTTTCTCAAACAACGAATAAGCCAATTTAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CAA 90 bp | TTCTTCTCTTCACTAAATTGGCTTATTCGTTGTTTGAGAAACTCATaGAGCTGCAAAACTTCTTTCTCAGTAGATGCTAGCTTTTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: FFSSLNWLIRCLRNS*SCKTSFSVDASFCS Trigger: TGAGCAAAAGCTAGCATCTACTGAGAAAGAAGTTTTGCAGCTCAATGAGTTTCTCAAACAACGAATAAGCCAATTTAGTGAAGAGAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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| CDS CCA 72 bp | GCCCGTAGTTCATTATCCCTTATCCTTTCATGTAAGTaGTTAATTTGTTGCTTCTGCCTATCAATTACAATT | + |
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Preference number: 6 (lower is better) Translates to: ARSSLSLILSCK*LICCFCLSITI Trigger: AATTGTAATTGATAGGCAGAAGCAACAAATTAACCACTTACATGAAAGGATAAGGGATAATGAACTACGGGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095691.7 ENSMUST00000220376.2 ENSMUST00000220443.2 |
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