Pregenerated sensors for CEP76 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073542Ensembl transcript IDs: ENSMUST00000097542.4
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCTGCCAGTAGGCTGGCTTCACACAGACTTCTaGAAAGCCTCATATACCCCT | + |
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Preference number: 2 (lower is better) Translates to: LPSAGIKSVHHHGLPVGWLHTDF*KASYTP Trigger: AGGGGTATATGAGGCTTTCCAGAAGTCTGTGTGAAG...CCAGCCTACTGGCAGGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCTGCCAGTAGGCTGGTTGTTGTTTGTGTTTTaGAGTCAGGTTCTCACTGTG | + |
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Preference number: 2 (lower is better) Translates to: LPSAGIKSVHHHGLPVGWLLFVF*SQVLTV Trigger: CACAGTGAGAACCTGACTCCAAAACACAAACAACAA...CCAGCCTACTGGCAGGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| 3UTR CCA 72 bp | TGTTTTGGAGTCAGGTTCTCACTGTGTGGCCCTGACTaGCCTGGAGTTTGCTATGTAGACCTGTTGTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: CFGVRFSLCGPD*PGVCYVDLLWN Trigger: ATTCCACAACAGGTCTACATAGCAAACTCCAGGCCAGTCAGGGCCACACAGTGAGAACCTGACTCCAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | CCGCGTGTTTCTGCCTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCCCGAGGCGTCAATCGTaGACGCACACAGAGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: PRVSASLVLELKVCTTMAPRRQS*THTEVG Trigger: TCCCACCTCTGTGTGCGTCCACGATTGACGCCTCGG...GGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAGGCAGAAACACGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | CCGCGTGTTTCTGCCTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCGGGCTGCTCAGCAAGTaGAGGTCCGTCAGGATTGGT | + |
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Preference number: 4 (lower is better) Translates to: PRVSASLVLELKVCTTMAGLLSK*RSVRIG Trigger: ACCAATCCTGACGGACCTCCACTTGCTGAGCAGCCC...GGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAGGCAGAAACACGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | CCGCGTGTTTCTGCCTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCCTGTGCCTACACCCATaGGCTCCACAGTCAGATTGG | + |
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Preference number: 4 (lower is better) Translates to: PRVSASLVLELKVCTTMALCLHP*APQSDW Trigger: CCAATCTGACTGTGGAGCTCATGGGTGTAGGCACAG...GGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAGGCAGAAACACGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | CCGCGTGTTTCTGCCTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCGGTCTCTACTGCATCTaGGGGCTGACAGTTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PRVSASLVLELKVCTTMAGLYCI*GLTVSQ Trigger: CTGGGAAACTGTCAGCCCTCAGATGCAGTAGAGACC...GGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAGGCAGAAACACGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR GCA 90 bp | CTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCTGCCAGTAGGCTGGTCCATCTTGCTCAGCTaGTGGTGGATGAGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPSAGIKSVHHHGLPVGWSILLS*WWMSCF Trigger: GAAGCAGCTCATCCACCAGCAGCTGAGCAAGATGGA...CCAGCCTACTGGCAGGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR GCA 90 bp | CCGCGTGTTTCTGCCTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCGAAAAGCCAGCAGAGTaGACCACTGTTCCTGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PRVSASLVLELKVCTTMAEKPAE*TTVPAC Trigger: GCAAGCAGGAACAGTGGTGCACTCTGCTGGCTTTTC...GGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAGGCAGAAACACGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | CTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCTGCCAGTAGGCTGGCCTGGGCAAAAATCTTaGCCAGCCTTGAGTTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LPSAGIKSVHHHGLPVGWPGQKS*PALSCE Trigger: CTCACAACTCAAGGCTGGTCAAGATTTTTGCCCAGG...CCAGCCTACTGGCAGGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | CCGCGTGTTTCTGCCTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCTCGTCCAGCTCGAAGTaGCTTAACGTAGGAACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PRVSASLVLELKVCTTMASSSSK*LNVGTD Trigger: GTCTGTTCCTACGTTAAGCCACTTCGAGCTGGACGA...GGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAGGCAGAAACACGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | CCGCGTGTTTCTGCCTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCTCGATATGGGTACAGTaGTTTGGGCTGCTCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: PRVSASLVLELKVCTTMASIWVQ*FGLLSK Trigger: CTTGCTGAGCAGCCCAAACCACTGTACCCATATCGA...GGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAGGCAGAAACACGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACATCAGCTGCTGGTGGATaGGCTGCTTCAGCTCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: AWSLLCRPVVELKVCATTSAAGG*AASAPR Trigger: CCTCGGAGCTGAAGCAGCTCATCCACCAGCAGCTGA...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | CTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCTGCCAGTAGGCTGGTCCCACGGAAACTTTTaGTTCTGTGCCTACACCCAT | + |
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Preference number: 4 (lower is better) Translates to: LPSAGIKSVHHHGLPVGWSHGNF*FCAYTH Trigger: ATGGGTGTAGGCACAGAATCAAAAGTTTCCGTGGGA...CCAGCCTACTGGCAGGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | CCGCGTGTTTCTGCCTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCTTCTCTGCAGTTTTCTaGCGTTCCAAGGCAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PRVSASLVLELKVCTTMAFSAVF*RSKASC Trigger: ACAGCTTGCCTTGGAACGTCAGAAAACTGCAGAGAA...GGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAGGCAGAAACACGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | CCGCGTGTTTCTGCCTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCAATCTTGACCAGCCTTaGGTTGTGAGAAGGTCGAAT | + |
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Preference number: 4 (lower is better) Translates to: PRVSASLVLELKVCTTMANLDQP*VVRRSN Trigger: ATTCGACCTTCTCACAACTCAAGGCTGGTCAAGATT...GGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAGGCAGAAACACGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR GCA 90 bp | CCGCGTGTTTCTGCCTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCTTGTGGATGTACCTGTaGCCTGTTAAACTCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PRVSASLVLELKVCTTMALWMYL*PVKLSQ Trigger: TTGGGAGAGTTTAACAGGGCACAGGTACATCCACAA...GGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAGGCAGAAACACGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR GCA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACATACAGTGGTTTGGGCTaGTCAGCAAGTGGAGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: AWSLLCRPVVELKVCATTYSGLG*SASGGP Trigger: CGGACCTCCACTTGCTGAGCAGCCCAAACCACTGTA...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | CTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCTGCCAGTAGGCTGGAGGACGCAACTAAAGTaGTCTCACCAAATATGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LPSAGIKSVHHHGLPVGWRTQLK*SHQICL Trigger: CAGACATATTTGGTGAGACCACTTTAGTTGCGTCCT...CCAGCCTACTGGCAGGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | CCGCGTGTTTCTGCCTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCCGTTTGGCTGAGCGGTaGGTACATTTCAAGTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PRVSASLVLELKVCTTMARLAER*VHFKFY Trigger: ATAAAACTTGAAATGTACCCACCGCTCAGCCAAACG...GGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAGGCAGAAACACGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACACACAGCAGGTTAGCGTaGTCCTCACAATCACCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AWSLLCRPVVELKVCATTHSRLA*SSQSPL Trigger: CAAGGGTGATTGTGAGGACCACGCTAACCTGCTGTG...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | CTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCTGCCAGTAGGCTGGGGAACATCTGATGATTaGAAACACAACCAATTGTTC | + |
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Preference number: 4 (lower is better) Translates to: LPSAGIKSVHHHGLPVGWGTSDD*KHNQLF Trigger: GAACAATTGGTTGTGTTTTCAATCATCAGATGTTCC...CCAGCCTACTGGCAGGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACACAGGTACAGCCCTCCTaGTGGCATCCTGAAATTCTT | + |
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Preference number: 4 (lower is better) Translates to: AWSLLCRPVVELKVCATTQVQPS*WHPEIL Trigger: AAGAATTTCAGGATGCCATCAGGAGGGCTGTACCTG...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | CTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCTGCCAGTAGGCTGGTCATGGGTTTCCACTTaGACTCATCATTCAAATCAA | + |
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Preference number: 4 (lower is better) Translates to: LPSAGIKSVHHHGLPVGWSWVST*THHSNQ Trigger: TTGATTTGAATGATGAGTCCAAGTGGAAACCCATGA...CCAGCCTACTGGCAGGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACAGAGACCGAAGACAAGTaGCAAATGCACGCCTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: AWSLLCRPVVELKVCATTETEDK*QMHALH Trigger: ATGCAAGGCGTGCATTTGCCACTTGTCTTCGGTCTC...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACACTCCTGATGGCATCCTaGAATTCTTCATTGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: AWSLLCRPVVELKVCATTLLMAS*NSSLPA Trigger: TGCAGGCAATGAAGAATTTCAGGATGCCATCAGGAG...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACAACCAGCCTTGAGTTGTaGGAAGGTCGAATTTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: AWSLLCRPVVELKVCATTTSLEL*EGRICK Trigger: TTTGCAAATTCGACCTTCTCACAACTCAAGGCTGGT...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACAACCAATTGTTCGATATaGGTACAGTGGTTTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: AWSLLCRPVVELKVCATTTNCSI*VQWFGL Trigger: CAGCCCAAACCACTGTACCCATATCGAACAATTGGT...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACACCTAAACTTTCTCTGTaGACTTCAAGCAAAAAGCCG | + |
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Preference number: 4 (lower is better) Translates to: AWSLLCRPVVELKVCATTPKLSL*TSSKKP Trigger: CGGCTTTTTGCTTGAAGTTCACAGAGAAAGTTTAGG...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR GCA 90 bp | TGTAAAGTAACAGATCTTACATTCACATTTAAACACCGAGTCCCTCAGAACACATGCTGGTGGATGAGCTaGTTCAGCTCCGAGGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: CKVTDLTFTFKHRVPQNTCWWMS*FSSEAF Trigger: GAAAGCCTCGGAGCTGAAGCAGCTCATCCACCAGCA...TGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAGATCTGTTACTTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR GCA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACATCAAAACCAACGGTTTaGTTTGGAGAAGAAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: AWSLLCRPVVELKVCATTSKPTV*FGEEGS Trigger: ACTCCCTTCTTCTCCAAAGCAAACCGTTGGTTTTGA...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR GCA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACACATTGCCTGCAGATATaGTTGTTGTTCGCTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: AWSLLCRPVVELKVCATTHCLQI*LLFAQT Trigger: AGTTTGAGCGAACAACAAGCATATCTGCAGGCAATG...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACAGACGTCTTAGAGCTTTaGTCAGATCTTCTGTTGATA | + |
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Preference number: 4 (lower is better) Translates to: AWSLLCRPVVELKVCATTDVLEL*SDLLLI Trigger: TATCAACAGAAGATCTGATCAAAGCTCTAAGACGTC...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | TGTAAAGTAACAGATCTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAACTGCATCTGAGGGCTaGCAGTTTCCCAGGAACATC | + |
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Preference number: 4 (lower is better) Translates to: CKVTDLTFTFKHRVPQNTTASEG*QFPRNI Trigger: GATGTTCCTGGGAAACTGTCAGCCCTCAGATGCAGT...TGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAGATCTGTTACTTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | CTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAGTGTCATTTATTATTCGAGGCCAGAGCTGGTaGCAAAAGATAGGAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LTFTFKHRVPQNTVSFIIRGQSW*QKIGEL Trigger: CAGCTCTCCTATCTTTTGTCACCAGCTCTGGCCTCG...AATAATAAATGACACTGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR GCA 90 bp | TGTAAAGTAACAGATCTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAGTGCACCACTGTTCCTaGTTGCCACCTCCTCCAATA | + |
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Preference number: 4 (lower is better) Translates to: CKVTDLTFTFKHRVPQNTVHHCS*LPPPPI Trigger: TATTGGAGGAGGTGGCAAGCAGGAACAGTGGTGCAC...TGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAGATCTGTTACTTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR GCA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACAACACACAGACTTAATTaGTTCTTCGCTCATGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: AWSLLCRPVVELKVCATTTHRLN*FFAHGF Trigger: AAACCCATGAGCGAAGAAGCAATTAAGTCTGTGTGT...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR GCA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACAGGCAAATGCACGCCTTaGATTTCTATACACAAAATG | + |
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Preference number: 4 (lower is better) Translates to: AWSLLCRPVVELKVCATTGKCTP*ISIHKM Trigger: CATTTTGTGTATAGAAATGCAAGGCGTGCATTTGCC...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR GCA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACAAAGACAAGTGGCAAATaGACGCCTTGCATTTCTATA | + |
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Preference number: 4 (lower is better) Translates to: AWSLLCRPVVELKVCATTKTSGK*TPCISI Trigger: TATAGAAATGCAAGGCGTGCATTTGCCACTTGTCTT...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | TGTAAAGTAACAGATCTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAATCTTGCTCAGCTGCTaGTGGATGAGCTGCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: CKVTDLTFTFKHRVPQNTILLSC*WMSCFS Trigger: GCTGAAGCAGCTCATCCACCAGCAGCTGAGCAAGAT...TGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAGATCTGTTACTTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | TGTAAAGTAACAGATCTTACATTCACATTTAAACACCGAGTCCCTCAGAACACACGCAGGGTACAGGTTTaGAGCGAAATCGTTGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: CKVTDLTFTFKHRVPQNTRRVQV*SEIVGS Trigger: GGAACCAACGATTTCGCTCCAAACCTGTACCCTGCG...TGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAGATCTGTTACTTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | TGTAAAGTAACAGATCTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAATGGGTACAGTGGTTTaGGCTGCTCAGCAAGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: CKVTDLTFTFKHRVPQNTMGTVV*AAQQVE Trigger: CTCCACTTGCTGAGCAGCCCAAACCACTGTACCCAT...TGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAGATCTGTTACTTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | TGTAAAGTAACAGATCTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAACTGCCAGTCGCACCTaGTCTCCACGACAACAGATT | + |
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Preference number: 4 (lower is better) Translates to: CKVTDLTFTFKHRVPQNTTASRT*SPRQQI Trigger: AATCTGTTGTCGTGGAGACCAGGTGCGACTGGCAGT...TGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAGATCTGTTACTTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | CTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAGTGTCATTTATTATTAACTCTCCCAAAACATaGTGGTGCCATCAGTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LTFTFKHRVPQNTVSFIINSPKT*WCHQSH Trigger: GTGGGACTGATGGCACCATCATGTTTTGGGAGAGTT...AATAATAAATGACACTGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | TGTAAAGTAACAGATCTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAGCTCCACAGTCAGATTaGTCACTCCATTTTCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: CKVTDLTFTFKHRVPQNTAPQSD*SLHFLS Trigger: GCTCAGAAAATGGAGTGACCAATCTGACTGTGGAGC...TGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAGATCTGTTACTTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR GCA 90 bp | TGTAAAGTAACAGATCTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAGATCCAAACAGCACATaGAGACTCAGGGTAGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CKVTDLTFTFKHRVPQNTDPNST*RLRVGK Trigger: TTTACCTACCCTGAGTCTGCATGTGCTGTTTGGATC...TGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAGATCTGTTACTTTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | CTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAGTGTCATTTATTATTGAAGAAGGGAGTTCTTaGTCAACACTATCAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LTFTFKHRVPQNTVSFIIEEGSS*STLSVT Trigger: TGTGACTGATAGTGTTGATCAAGAACTCCCTTCTTC...AATAATAAATGACACTGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR GCA 90 bp | TGTAAAGTAACAGATCTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAGAATTTCTCTTATTCTaGCATGGACATCCATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CKVTDLTFTFKHRVPQNTEFLLF*HGHPSC Trigger: GCAAGATGGATGTCCATGGCAGAATAAGAGAAATTC...TGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAGATCTGTTACTTTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | CTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAGTGTCATTTATTATTTCATTACATCATCAATaGTTCCTCGACGTCTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTFTFKHRVPQNTVSFIISLHHQ*FLDVLE Trigger: CTCTAAGACGTCGAGGAATCATTGATGATGTAATGA...AATAATAAATGACACTGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CCA 90 bp | CTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAGTGTCATTTATTATTAACGTAGGAACAGACTaGTCTATTTATCCCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTFTFKHRVPQNTVSFIINVGTD*SIYPIL Trigger: GAGAATGGGATAAATAGACCAGTCTGTTCCTACGTT...AATAATAAATGACACTGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR TCA 90 bp | CTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAGTGTCATTTATTATTGTTGATAAATGTTGTTaGTCCGGTGCTAATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTFTFKHRVPQNTVSFIIVDKCC*SGANSS Trigger: AGAAGAATTAGCACCGGATCAACAACATTTATCAAC...AATAATAAATGACACTGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS CCA 90 bp | ACCAATTGTTCGATATGGGTACAGTGGTTTGGGCTGCTCAGCAAGTaGAGGTCCGTCAGGATTGGTAGGCTTGTGGATGTACCTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TNCSIWVQWFGLLSK*RSVRIGRLVDVPVP Trigger: GGGCACAGGTACATCCACAAGCCTACCAATCCTGACGGACCTCCACTTGCTGAGCAGCCCAAACCACTGTACCCATATCGAACAATTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CAA 90 bp | CCGCGTGTTTCTGCCTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCAGCTCCACAGTCAGATaGGTCACTCCATTTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PRVSASLVLELKVCTTMASSTVR*VTPFSE Trigger: CTCAGAAAATGGAGTGACCAATCTGACTGTGGAGCT...GGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAGGCAGAAACACGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CAA 90 bp | CTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCTGCCAGTAGGCTGGGTGAGAAGGTCGAATTaGCAAATACTCCCTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: LPSAGIKSVHHHGLPVGWVRRSN*QILPPP Trigger: TGGTGGAGGGAGTATTTGCAAATTCGACCTTCTCAC...CCAGCCTACTGGCAGGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS TCA 90 bp | AGATATGCTTGTTGTTCGCTCAAACTCATACGAGGCCAGAGCTGGTaGCAAAAGATAGGAGAGCTGGTCTTCCCAGACAGTGGTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RYACCSLKLIRGQSW*QKIGELVFPDSGEA Trigger: GGCCTCACCACTGTCTGGGAAGACCAGCTCTCCTATCTTTTGTCACCAGCTCTGGCCTCGTATGAGTTTGAGCGAACAACAAGCATATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS CCA 90 bp | TCGAGCCGCTTGCCTCGGAGTATCCAGAAGTCGTCCAGCTCGAAGTaGCTTAACGTAGGAACAGACTGGTCTATTTATCCCATTCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SSRLPRSIQKSSSSK*LNVGTDWSIYPILI Trigger: GATGAGAATGGGATAAATAGACCAGTCTGTTCCTACGTTAAGCCACTTCGAGCTGGACGACTTCTGGATACTCCGAGGCAAGCGGCTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS GCA 90 bp | AACAGCACATGCAGACTCAGGGTAGGTAAACACTCGAACGCGAACTaGCAGTCGCACCTGGTCTCCACGACAACAGATTATTTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: NSTCRLRVGKHSNAN*QSHLVSTTTDYFFT Trigger: TGTGAAGAAATAATCTGTTGTCGTGGAGACCAGGTGCGACTGGCAGTTCGCGTTCGAGTGTTTACCTACCCTGAGTCTGCATGTGCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
||
| CDS-3UTR CAA 90 bp | CCGCGTGTTTCTGCCTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCCTCATGGGTTTCCACTaGGACTCATCATTCAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: PRVSASLVLELKVCTTMALMGFH*DSSFKS Trigger: TGATTTGAATGATGAGTCCAAGTGGAAACCCATGAG...GGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAGGCAGAAACACGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS GCA 90 bp | TTGAAAACACAACCAATTGTTCGATATGGGTACAGTGGTTTGGGCTaGTCAGCAAGTGGAGGTCCGTCAGGATTGGTAGGCTTGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LKTQPIVRYGYSGLG*SASGGPSGLVGLWM Trigger: CATCCACAAGCCTACCAATCCTGACGGACCTCCACTTGCTGAGCAGCCCAAACCACTGTACCCATATCGAACAATTGGTTGTGTTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS CCA 90 bp | TCCCAGGAACATCTGATGATTGAAAACACAACCAATTGTTCGATATaGGTACAGTGGTTTGGGCTGCTCAGCAAGTGGAGGTCCGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQEHLMIENTTNCSI*VQWFGLLSKWRSVR Trigger: CCTGACGGACCTCCACTTGCTGAGCAGCCCAAACCACTGTACCCATATCGAACAATTGGTTGTGTTTTCAATCATCAGATGTTCCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CAA 90 bp | CTCCCTAGTGCTGGAATTAAAAGTGTGCACCACCATGGCCTGCCAGTAGGCTGGTGGCAAATGCACGCCTaGCATTTCTATACACAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LPSAGIKSVHHHGLPVGWWQMHA*HFYTQN Trigger: ATTTTGTGTATAGAAATGCAAGGCGTGCATTTGCCA...CCAGCCTACTGGCAGGCCATGGTGGTGCACACTTTTAATTCCAGCACTAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
||
| CDS CCA 90 bp | CATCTGATGATTGAAAACACAACCAATTGTTCGATATGGGTACAGTaGTTTGGGCTGCTCAGCAAGTGGAGGTCCGTCAGGATTGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: HLMIENTTNCSIWVQ*FGLLSKWRSVRIGR Trigger: CCTACCAATCCTGACGGACCTCCACTTGCTGAGCAGCCCAAACCACTGTACCCATATCGAACAATTGGTTGTGTTTTCAATCATCAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS TCA 90 bp | CAGGTTTGGAGCGAAATCGTTGGTTCCGATAGTGCAAACATAAAGTaGAAGTCGAGCAAATCTGTCCAGGCAAAGGCTCAGGTTCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QVWSEIVGSDSANIK*KSSKSVQAKAQVLA Trigger: TGCAAGAACCTGAGCCTTTGCCTGGACAGATTTGCTCGACTTTCACTTTATGTTTGCACTATCGGAACCAACGATTTCGCTCCAAACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS TCA 90 bp | ATCCCATTCTCATCCTGGGCAAAAATCTTGACCAGCCTTGAGTTGTaGGAAGGTCGAATTTGCAAATACTCCCTCCACCACTGCTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: IPFSSWAKILTSLEL*EGRICKYSLHHCLA Trigger: TGCTAAGCAGTGGTGGAGGGAGTATTTGCAAATTCGACCTTCTCACAACTCAAGGCTGGTCAAGATTTTTGCCCAGGATGAGAATGGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS GCA 90 bp | CTTCGCTCATGGGTTTCCACTTGGACTCATCATTCAAATCAAATATaGAGGTCTCTACTGCATCTGAGGGCTGACAGTTTCCCAGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LRSWVSTWTHHSNQI*RSLLHLRADSFPGT Trigger: TGTTCCTGGGAAACTGTCAGCCCTCAGATGCAGTAGAGACCTGCATATTTGATTTGAATGATGAGTCCAAGTGGAAACCCATGAGCGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS CCA 90 bp | ATCCAGAAGTCGTCCAGCTCGAAGTGGCTTAACGTAGGAACAGACTaGTCTATTTATCCCATTCTCATCCTGGGCAAAAATCTTGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: IQKSSSSKWLNVGTD*SIYPILILGKNLDQ Trigger: CTGGTCAAGATTTTTGCCCAGGATGAGAATGGGATAAATAGACCAGTCTGTTCCTACGTTAAGCCACTTCGAGCTGGACGACTTCTGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CAA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACATTCCCACGGAAACTTTaGATTCTGTGCCTACACCCA | + |
|
Preference number: 5 (lower is better) Translates to: AWSLLCRPVVELKVCATTFPRKL*ILCLHP Trigger: TGGGTGTAGGCACAGAATCAAAAGTTTCCGTGGGAA...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CAA 90 bp | GCCTGGAGTTTGCTATGTAGACCTGTTGTGGAATTAAAAGTGTGTGCCACCACACGACGTCTTAGAGCTTaGATCAGATCTTCTGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: AWSLLCRPVVELKVCATTRRLRA*IRSSVD Trigger: ATCAACAGAAGATCTGATCAAAGCTCTAAGACGTCG...TGTGGTGGCACACACTTTTAATTCCACAACAGGTCTACATAGCAAACTCCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS TCA 90 bp | GTTGTTGAATCAGCCATTCTAGTTCCATCACCTAAACTTTCTCTGTaGACTTCAAGCAAAAAGCCGTCATGGAAATCTGGCTCACAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: VVESAILVPSPKLSL*TSSKKPSWKSGSQA Trigger: CGCTTGTGAGCCAGATTTCCATGACGGCTTTTTGCTTGAAGTTCACAGAGAAAGTTTAGGTGATGGAACTAGAATGGCTGATTCAACAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CAA 90 bp | CTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAGTGTCATTTATTATTCCATGGACATCCATCTaGCTCAGCTGCTGGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LTFTFKHRVPQNTVSFIIPWTSI*LSCWWM Trigger: CATCCACCAGCAGCTGAGCAAGATGGATGTCCATGG...AATAATAAATGACACTGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CAA 90 bp | TGTAAAGTAACAGATCTTACATTCACATTTAAACACCGAGTCCCTCAGAACACATATGGGTACAGTGGTTaGGGCTGCTCAGCAAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CKVTDLTFTFKHRVPQNTYGYSG*GCSASG Trigger: TCCACTTGCTGAGCAGCCCAAACCACTGTACCCATA...TGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAGATCTGTTACTTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS TCA 90 bp | CTTGGACTCATCATTCAAATCAAATATGCAGGTCTCTACTGCATCTaGGGGCTGACAGTTTCCCAGGAACATCTGATGATTGAAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: LGLIIQIKYAGLYCI*GLTVSQEHLMIENT Trigger: TGTGTTTTCAATCATCAGATGTTCCTGGGAAACTGTCAGCCCTCAGATGCAGTAGAGACCTGCATATTTGATTTGAATGATGAGTCCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CAA 90 bp | CTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAGTGTCATTTATTATTCACCACTGTTCCTGCTaGCCACCTCCTCCAATAACA | + |
|
Preference number: 5 (lower is better) Translates to: LTFTFKHRVPQNTVSFIIHHCSC*PPPPIT Trigger: TGTTATTGGAGGAGGTGGCAAGCAGGAACAGTGGTG...AATAATAAATGACACTGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CAA 90 bp | CTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAGTGTCATTTATTATTTCAGGATTGGTAGGCTaGTGGATGTACCTGTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LTFTFKHRVPQNTVSFIISGLVG*WMYLCP Trigger: AGGGCACAGGTACATCCACAAGCCTACCAATCCTGA...AATAATAAATGACACTGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CAA 90 bp | TGTAAAGTAACAGATCTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAAGAAGAAGGGAGTTCTaGATCAACACTATCAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CKVTDLTFTFKHRVPQNTRRREF*INTISH Trigger: GTGACTGATAGTGTTGATCAAGAACTCCCTTCTTCT...TGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAGATCTGTTACTTTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CAA 90 bp | CTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAGTGTCATTTATTATTAACCAACGGTTTGCTTaGGAGAAGAAGGGAGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LTFTFKHRVPQNTVSFIINQRFA*EKKGVL Trigger: AAGAACTCCCTTCTTCTCCAAAGCAAACCGTTGGTT...AATAATAAATGACACTGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS-3UTR CAA 90 bp | CTTACATTCACATTTAAACACCGAGTCCCTCAGAACACAGTGTCATTTATTATTATCAAAACCAACGGTTaGCTTTGGAGAAGAAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LTFTFKHRVPQNTVSFIIIKTNG*LWRRRE Trigger: CTCCCTTCTTCTCCAAAGCAAACCGTTGGTTTTGAT...AATAATAAATGACACTGTGTTCTGAGGGACTCGGTGTTTAAATGTGAATGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS TCA 90 bp | GGAAATAGGACGCAACTAAAGTGGTCTCACCAAATATGTCTGTTTTaGTTAGTACCATGTGAATTGGATCACTTATTGATAACATTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GNRTQLKWSHQICLF*LVPCELDHLLITLL Trigger: CAACAATGTTATCAATAAGTGATCCAATTCACATGGTACTAATCAAAACAGACATATTTGGTGAGACCACTTTAGTTGCGTCCTATTTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS TCA 72 bp | TGCCATGGACATCCATCTTGCTCAGCTGCTGGTGGATaGGCTGCTTCAGCTCCGAGGCTTTCTCCGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CHGHPSCSAAGG*AASAPRLSPEA Trigger: TGCCTCCGGAGAAAGCCTCGGAGCTGAAGCAGCTCATCCACCAGCAGCTGAGCAAGATGGATGTCCATGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS CAA 90 bp | TTTCTGTGCTCCGACACCAGAAGCCTCAGCTGCATTTCGATTTCATaGCTGGTGACCGAGGCGTCAATCGTGGACGCACACAGAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FLCSDTRSLSCISIS*LVTEASIVDAHRGG Trigger: CCCACCTCTGTGTGCGTCCACGATTGACGCCTCGGTCACCAGCAATGAAATCGAAATGCAGCTGAGGCTTCTGGTGTCGGAGCACAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS CAA 72 bp | TCCGACACCAGAAGCCTCAGCTGCATTTCGATTTCATaGCTGGTGACCGAGGCGTCAATCGTGGACGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: SDTRSLSCISIS*LVTEASIVDAH Trigger: GTGTGCGTCCACGATTGACGCCTCGGTCACCAGCAATGAAATCGAAATGCAGCTGAGGCTTCTGGTGTCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS GCA 72 bp | CTACAGAGAAAAGCCAGCAGAGTGCACCACTGTTCCTaGTTGCCACCTCCTCCAATAACAGGGGCTCGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LQRKASRVHHCS*LPPPPITGARS Trigger: TGAACGAGCCCCTGTTATTGGAGGAGGTGGCAAGCAGGAACAGTGGTGCACTCTGCTGGCTTTTCTCTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS GCA 72 bp | CAACCAATTGTTCGATATGGGTACAGTGGTTTGGGCTaGTCAGCAAGTGGAGGTCCGTCAGGATTGGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QPIVRYGYSGLG*SASGGPSGLVG Trigger: GCCTACCAATCCTGACGGACCTCCACTTGCTGAGCAGCCCAAACCACTGTACCCATATCGAACAATTGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS CCA 72 bp | TCGATATGGGTACAGTGGTTTGGGCTGCTCAGCAAGTaGAGGTCCGTCAGGATTGGTAGGCTTGTGGATGTA | + |
|
Preference number: 6 (lower is better) Translates to: SIWVQWFGLLSK*RSVRIGRLVDV Trigger: TACATCCACAAGCCTACCAATCCTGACGGACCTCCACTTGCTGAGCAGCCCAAACCACTGTACCCATATCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS CAA 90 bp | AACAGGGGCTCGTTCATAACCAAGGACATTAACAAATCGAGCCGCTaGCCTCGGAGTATCCAGAAGTCGTCCAGCTCGAAGTGGCTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: NRGSFITKDINKSSR*PRSIQKSSSSKWLN Trigger: GTTAAGCCACTTCGAGCTGGACGACTTCTGGATACTCCGAGGCAAGCGGCTCGATTTGTTAATGTCCTTGGTTATGAACGAGCCCCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
||
| CDS GCA 72 bp | GTCGAGCAAATCTGTCCAGGCAAAGGCTCAGGTTCTTaGAGATGTTCCAAGAAAGCTTTTCCACCCAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: VEQICPGKGSGS*RCSKKAFPPRT Trigger: GGTTCTGGGTGGAAAAGCTTTCTTGGAACATCTGCAAGAACCTGAGCCTTTGCCTGGACAGATTTGCTCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
||
| CDS CCA 72 bp | TTGCCTCGGAGTATCCAGAAGTCGTCCAGCTCGAAGTaGCTTAACGTAGGAACAGACTGGTCTATTTATCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPRSIQKSSSSK*LNVGTDWSIYP Trigger: GGGATAAATAGACCAGTCTGTTCCTACGTTAAGCCACTTCGAGCTGGACGACTTCTGGATACTCCGAGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
||
| CDS CCA 72 bp | AAACACAACCAATTGTTCGATATGGGTACAGTGGTTTaGGCTGCTCAGCAAGTGGAGGTCCGTCAGGATTGG | + |
|
Preference number: 6 (lower is better) Translates to: KHNQLFDMGTVV*AAQQVEVRQDW Trigger: CCAATCCTGACGGACCTCCACTTGCTGAGCAGCCCAAACCACTGTACCCATATCGAACAATTGGTTGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
||
| CDS CAA 72 bp | TCGTTCATAACCAAGGACATTAACAAATCGAGCCGCTaGCCTCGGAGTATCCAGAAGTCGTCCAGCTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SFITKDINKSSR*PRSIQKSSSSK Trigger: CTTCGAGCTGGACGACTTCTGGATACTCCGAGGCAAGCGGCTCGATTTGTTAATGTCCTTGGTTATGAACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
||
| CDS CCA 72 bp | CATGGAAATCTGGCTCACAAGCGCAGGGTACAGGTTTaGAGCGAAATCGTTGGTTCCGATAGTGCAAACATA | + |
|
Preference number: 6 (lower is better) Translates to: HGNLAHKRRVQV*SEIVGSDSANI Trigger: TATGTTTGCACTATCGGAACCAACGATTTCGCTCCAAACCTGTACCCTGCGCTTGTGAGCCAGATTTCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
||
| CDS CAA 72 bp | AGTCGAGCAAATCTGTCCAGGCAAAGGCTCAGGTTCTaGCAGATGTTCCAAGAAAGCTTTTCCACCCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SRANLSRQRLRF*QMFQESFSTQN Trigger: GTTCTGGGTGGAAAAGCTTTCTTGGAACATCTGCAAGAACCTGAGCCTTTGCCTGGACAGATTTGCTCGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
||
| CDS CAA 72 bp | GATTCTGTGCCTACACCCATGAGCTCCACAGTCAGATaGGTCACTCCATTTTCTGAGCCCAAAACTGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: DSVPTPMSSTVR*VTPFSEPKTDL Trigger: GAGATCAGTTTTGGGCTCAGAAAATGGAGTGACCAATCTGACTGTGGAGCTCATGGGTGTAGGCACAGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
||
| CDS TCA 72 bp | TCATCCTGGGCAAAAATCTTGACCAGCCTTGAGTTGTaGGAAGGTCGAATTTGCAAATACTCCCTCCACCAC | + |
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Preference number: 6 (lower is better) Translates to: SSWAKILTSLEL*EGRICKYSLHH Trigger: GTGGTGGAGGGAGTATTTGCAAATTCGACCTTCTCACAACTCAAGGCTGGTCAAGATTTTTGCCCAGGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS CAA 72 bp | GGCAAGCTGTGTGTTCACTACCTCCTGAGACAGCGTTaGGCTGAGCGGTGGGTACATTTCAAGTTTTATATT | + |
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Preference number: 6 (lower is better) Translates to: GKLCVHYLLRQR*AERWVHFKFYI Trigger: AATATAAAACTTGAAATGTACCCACCGCTCAGCCAAACGCTGTCTCAGGAGGTAGTGAACACACAGCTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS CAA 72 bp | TGGCATCCTGAAATTCTTCATTGCCTGCAGATATGCTaGTTGTTCGCTCAAACTCATACGAGGCCAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: WHPEILHCLQIC*LFAQTHTRPEL Trigger: CAGCTCTGGCCTCGTATGAGTTTGAGCGAACAACAAGCATATCTGCAGGCAATGAAGAATTTCAGGATGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS TCA 72 bp | AGCGAAATCGTTGGTTCCGATAGTGCAAACATAAAGTaGAAGTCGAGCAAATCTGTCCAGGCAAAGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SEIVGSDSANIK*KSSKSVQAKAQ Trigger: CTGAGCCTTTGCCTGGACAGATTTGCTCGACTTTCACTTTATGTTTGCACTATCGGAACCAACGATTTCGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS TCA 72 bp | CCCATTCTCATCCTGGGCAAAAATCTTGACCAGCCTTaGGTTGTGAGAAGGTCGAATTTGCAAATACTCCCT | + |
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Preference number: 6 (lower is better) Translates to: PILILGKNLDQP*VVRRSNLQILP Trigger: AGGGAGTATTTGCAAATTCGACCTTCTCACAACTCAAGGCTGGTCAAGATTTTTGCCCAGGATGAGAATGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS GCA 72 bp | GCGATATTTACAAGCAAACATGATCCAAACAGCACATaGAGACTCAGGGTAGGTAAACACTCGAACGCGAAC | + |
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Preference number: 6 (lower is better) Translates to: AIFTSKHDPNST*RLRVGKHSNAN Trigger: GTTCGCGTTCGAGTGTTTACCTACCCTGAGTCTGCATGTGCTGTTTGGATCATGTTTGCTTGTAAATATCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS CCA 72 bp | TCGTCCAGCTCGAAGTGGCTTAACGTAGGAACAGACTaGTCTATTTATCCCATTCTCATCCTGGGCAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: SSSSKWLNVGTD*SIYPILILGKN Trigger: ATTTTTGCCCAGGATGAGAATGGGATAAATAGACCAGTCTGTTCCTACGTTAAGCCACTTCGAGCTGGACGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS CCA 72 bp | CATCTGATGATTGAAAACACAACCAATTGTTCGATATaGGTACAGTGGTTTGGGCTGCTCAGCAAGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: HLMIENTTNCSI*VQWFGLLSKWR Trigger: CCTCCACTTGCTGAGCAGCCCAAACCACTGTACCCATATCGAACAATTGGTTGTGTTTTCAATCATCAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS TCA 72 bp | GCTGTGTGTTCACTACCTCCTGAGACAGCGTTTGGCTaGGCGGTGGGTACATTTCAAGTTTTATATTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: AVCSLPPETAFG*AVGTFQVLYLK Trigger: TTTTAAATATAAAACTTGAAATGTACCCACCGCTCAGCCAAACGCTGTCTCAGGAGGTAGTGAACACACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS TCA 72 bp | ATCATTCAAATCAAATATGCAGGTCTCTACTGCATCTaGGGGCTGACAGTTTCCCAGGAACATCTGATGATT | + |
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Preference number: 6 (lower is better) Translates to: IIQIKYAGLYCI*GLTVSQEHLMI Trigger: AATCATCAGATGTTCCTGGGAAACTGTCAGCCCTCAGATGCAGTAGAGACCTGCATATTTGATTTGAATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS GCA 72 bp | TTCTTCACAAAAAGGAGACCGAAGACAAGTGGCAAATaGACGCCTTGCATTTCTATACACAAAATGTATGGG | + |
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Preference number: 6 (lower is better) Translates to: FFTKRRPKTSGK*TPCISIHKMYG Trigger: CCCATACATTTTGTGTATAGAAATGCAAGGCGTGCATTTGCCACTTGTCTTCGGTCTCCTTTTTGTGAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS CAA 72 bp | TTAATGTTGACTGCTTATCAAAACCAACGGTTTGCTTaGGAGAAGAAGGGAGTTCTTGATCAACACTATCAG | + |
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Preference number: 6 (lower is better) Translates to: LMLTAYQNQRFA*EKKGVLDQHYQ Trigger: CTGATAGTGTTGATCAAGAACTCCCTTCTTCTCCAAAGCAAACCGTTGGTTTTGATAAGCAGTCAACATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS CCA 72 bp | AGATTATTTCTTCACAAAAAGGAGACCGAAGACAAGTaGCAAATGCACGCCTTGCATTTCTATACACAAAAT | + |
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Preference number: 6 (lower is better) Translates to: RLFLHKKETEDK*QMHALHFYTQN Trigger: ATTTTGTGTATAGAAATGCAAGGCGTGCATTTGCCACTTGTCTTCGGTCTCCTTTTTGTGAAGAAATAATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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| CDS TCA 72 bp | ACGCAACTAAAGTGGTCTCACCAAATATGTCTGTTTTaGTTAGTACCATGTGAATTGGATCACTTATTGATA | + |
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Preference number: 6 (lower is better) Translates to: TQLKWSHQICLF*LVPCELDHLLI Trigger: TATCAATAAGTGATCCAATTCACATGGTACTAATCAAAACAGACATATTTGGTGAGACCACTTTAGTTGCGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097542.4 |
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