Pregenerated sensors for CEP68 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044066Ensembl transcript IDs: ENSMUST00000050611.14, ENSMUST00000109596.8, ENSMUST00000162811.2
Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACGTACGCACAGACCATGTGGCTGTCTCTACCCGGCCCAGTCCTCTaGCTAGTCTTCCAAGGGGAAGAGAACTGTGGCCTGAGATCCCCA | + |
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Preference number: 1 (lower is better) Translates to: TYAQTMWLSLPGPVL*LVFQGEENCGLRSP Trigger: TGGGGATCTCAGGCCACAGTTCTCTTCCCCTTGGAAGACTAGTCAGAGGACTGGGCCGGGTAGAGACAGCCACATGGTCTGTGCGTACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR TCA 90 bp | AGGTTAGCACAAGCATGCAGTTCAGAAGCATGGCAGGCCAGCTCCTaGGCATTCTTGACATGGTTGAAGTGGAGACTGACCACTATAGGT | + |
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Preference number: 1 (lower is better) Translates to: RLAQACSSEAWQASS*AFLTWLKWRLTTIG Trigger: ACCTATAGTGGTCAGTCTCCACTTCAACCATGTCAAGAATGCTCAGGAGCTGGCCTGCCATGCTTCTGAACTGCATGCTTGTGCTAACCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR CCA 90 bp | GTAAAGCTGCAGAGAAGACTTGAGACCTGTAAGGCTGGTCCTGGGTaGAGCACTGAGGTCAGCAACATCTGTGACATTATACAACCAGCA | + |
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Preference number: 1 (lower is better) Translates to: VKLQRRLETCKAGPG*STEVSNICDIIQPA Trigger: TGCTGGTTGTATAATGTCACAGATGTTGCTGACCTCAGTGCTCCACCCAGGACCAGCCTTACAGGTCTCAAGTCTTCTCTGCAGCTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| 3UTR TCA 90 bp | GATCAGCCTCTACCAAAGCACACGGAACACTGCTGCTGCGTTACCTaGTTTCTCTGCCATTTTCTTGCAATCACTAAAGGAGAACGATAC | + |
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Preference number: 1 (lower is better) Translates to: DQPLPKHTEHCCCVT*FLCHFLAITKGERY Trigger: GTATCGTTCTCCTTTAGTGATTGCAAGAAAATGGCAGAGAAATCAGGTAACGCAGCAGCAGTGTTCCGTGTGCTTTGGTAGAGGCTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| 3UTR CCA 90 bp | CCTAAGGTCCAGTGCTCTTTCGGACAGTTCCCTCAGGCTCATATTTaGCCACATCTTGTACCACGATGTCATTTTAAGTTTCAAAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: PKVQCSFGQFPQAHI*PHLVPRCHFKFQSC Trigger: ACAGCTTTGAAACTTAAAATGACATCGTGGTACAAGATGTGGCCAAATATGAGCCTGAGGGAACTGTCCGAAAGAGCACTGGACCTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR GCA 90 bp | TTCCCCACTGGCAGCAAGATTAGGGCTTACCAGACTATTTCAGCATaGTTCACTATTTGGTTTCATGTATGTGCTGATAATTGCTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: FPTGSKIRAYQTISA*FTIWFHVCADNCCF Trigger: AAAACAGCAATTATCAGCACATACATGAAACCAAATAGTGAAGCATGCTGAAATAGTCTGGTAAGCCCTAATCTTGCTGCCAGTGGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR TCA 90 bp | CACTGTAGACCTGTAACAACCCTGTCTCAAGATGCTACTTTACTGTaGACTCTGAACTTTAAGGGACCATTTATAAATTCTAAAAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: HCRPVTTLSQDATLL*TLNFKGPFINSKKA Trigger: AGCCTTTTTAGAATTTATAAATGGTCCCTTAAAGTTCAGAGTTCACAGTAAAGTAGCATCTTGAGACAGGGTTGTTACAGGTCTACAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR CCA 90 bp | AGCAAGATTAGGGCTTACCAGACTATTTCAGCATGCTTCACTATTTaGTTTCATGTATGTGCTGATAATTGCTGTTTTAGAGTGGGAAAT | + |
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Preference number: 1 (lower is better) Translates to: SKIRAYQTISACFTI*FHVCADNCCFRVGN Trigger: ATTTCCCACTCTAAAACAGCAATTATCAGCACATACATGAAACCAAATAGTGAAGCATGCTGAAATAGTCTGGTAAGCCCTAATCTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR TCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCCCCGGCCCAGTCCTCTaGCTAGTCTTCCAAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: CHRETCIMKSTLSVGHGSPGPVL*LVFQGE Trigger: TTCCCCTTGGAAGACTAGTCAGAGGACTGGGCCGGG...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR TCA 90 bp | ACTAATGTGAGCTGGTGCATGACTTTAATCCCAACACTTGGGGAGGCACAGGATAAGAGAACTGTGGCCTaGGATCCCCAGAGGTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: TNVSWCMTLIPTLGEAQDKRTVA*DPQRLA Trigger: TGCTAACCTCTGGGGATCTCAGGCCACAGTTCTCTT...ATCCTGTGCCTCCCCAAGTGTTGGGATTAAAGTCATGCACCAGCTCACATTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR GCA 90 bp | CCTGTAAGGCTGGTCCTGGGTGGAGCACTGAGGTCAGCAACATCTGTGACATTACTCCAGGTTTTCCTCTaGCAGGATAATGAATGCCAT | + |
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Preference number: 2 (lower is better) Translates to: PVRLVLGGALRSATSVTLLQVFL*QDNECH Trigger: ATGGCATTCATTATCCTGGCAGAGGAAAACCTGGAG...TAATGTCACAGATGTTGCTGACCTCAGTGCTCCACCCAGGACCAGCCTTACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| 3UTR-3UTR GCA 90 bp | ACTAATGTGAGCTGGTGCATGACTTTAATCCCAACACTTGGGGAGGCACAGGATTCCCATCCCCCTGTATaGCTGAGAATCCTAAGTACG | + |
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Preference number: 2 (lower is better) Translates to: TNVSWCMTLIPTLGEAQDSHPPV*LRILST Trigger: CGTACTTAGGATTCTCAGGCATACAGGGGGATGGGA...ATCCTGTGCCTCCCCAAGTGTTGGGATTAAAGTCATGCACCAGCTCACATTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR GCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCAGGTTAGCACAAGCATaGAGTTCAGAAGCATGGCAG | + |
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Preference number: 2 (lower is better) Translates to: CHRETCIMKSTLSVGHGSRLAQA*SSEAWQ Trigger: CTGCCATGCTTCTGAACTGCATGCTTGTGCTAACCT...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR CAA 90 bp | GATTTCCTCCCCTTCCTTAACTTCCATGGCTCTTACAAGGAGTTCTaGAGTTTTCTTTCCAGCTGCCATCTCGCCAATGACTCCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: DFLPFLNFHGSYKEF*SFLSSCHLANDSTS Trigger: AGAGGTGGAGTCATTGGCGAGATGGCAGCTGGAAAGAAAACTCAAGAACTCCTTGTAAGAGCCATGGAAGTTAAGGAAGGGGAGGAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR TCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCGAATTCTTTTCTTCCTaGCAAGGCACAACTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: CHRETCIMKSTLSVGHGSEFFSS*QGTTSC Trigger: ACAGGAAGTTGTGCCTTGTCAGGAAGAAAAGAATTC...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR TCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCGATGCTACTTTACTGTaGACTCTGAACTTTAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: CHRETCIMKSTLSVGHGSDATLL*TLNFKG Trigger: TCCCTTAAAGTTCAGAGTTCACAGTAAAGTAGCATC...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR TCA 90 bp | ACTAATGTGAGCTGGTGCATGACTTTAATCCCAACACTTGGGGAGGCACAGGATTTGGAAAGCTGTAACTaGTGCTTTGAACATATGGAC | + |
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Preference number: 2 (lower is better) Translates to: TNVSWCMTLIPTLGEAQDLESCN*CFEHMD Trigger: GTCCATATGTTCAAAGCATCAGTTACAGCTTTCCAA...ATCCTGTGCCTCCCCAAGTGTTGGGATTAAAGTCATGCACCAGCTCACATTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR CCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCACACATTTTATCTGCTaGTTTTTAAACACGAGACCC | + |
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Preference number: 2 (lower is better) Translates to: CHRETCIMKSTLSVGHGSTHFIC*FLNTRP Trigger: GGGTCTCGTGTTTAAAAACCAGCAGATAAAATGTGT...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR CCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCGATGCTTTGAACATATaGACCTATGATAGGTCCATA | + |
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Preference number: 2 (lower is better) Translates to: CHRETCIMKSTLSVGHGSDALNI*TYDRSI Trigger: TATGGACCTATCATAGGTCCATATGTTCAAAGCATC...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR CCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCGCTCCTTTAACATATTaGTGGGAAGGCAGTTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: CHRETCIMKSTLSVGHGSAPLTY*WEGSLN Trigger: ATTTAAACTGCCTTCCCACCAATATGTTAAAGGAGC...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR CCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCATTGATATTCCTAAATaGCATTCACAGCCAAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: CHRETCIMKSTLSVGHGSIDIPK*HSQPRS Trigger: TGACCTTGGCTGTGAATGCCATTTAGGAATATCAAT...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR TCA 90 bp | ACAACAAGAGAAGTCTACATGGCACATCTGACTGAGCTGCTATTTAACTTGTCCTGCTGCTGCGTTACCTaGTTTCTCTGCCATTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: TTREVYMAHLTELLFNLSCCCVT*FLCHFL Trigger: AAGAAAATGGCAGAGAAATCAGGTAACGCAGCAGCA...GGACAAGTTAAATAGCAGCTCAGTCAGATGTGCCATGTAGACTTCTCTTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| 3UTR-3UTR CCA 90 bp | ACTAATGTGAGCTGGTGCATGACTTTAATCCCAACACTTGGGGAGGCACAGGATTACAAACACTTTGCTTaGAAAGCTGTAACTGATGCT | + |
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Preference number: 2 (lower is better) Translates to: TNVSWCMTLIPTLGEAQDYKHFA*KAVTDA Trigger: AGCATCAGTTACAGCTTTCCAAGCAAAGTGTTTGTA...ATCCTGTGCCTCCCCAAGTGTTGGGATTAAAGTCATGCACCAGCTCACATTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR GCA 90 bp | TTACAAAAAGTCTATCTTCTTGTTACAAAGAGGATGAGCAGAAGCATAGAGCATTTCATCACCAATGGCTaGTTTAATTTACGTACGCAC | + |
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Preference number: 2 (lower is better) Translates to: LQKVYLLVTKRMSRSIEHFITNG*FNLRTH Trigger: GTGCGTACGTAAATTAAAGCAGCCATTGGTGATGAA...ATGCTCTATGCTTCTGCTCATCCTCTTTGTAACAAGAAGATAGACTTTTTGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR GCA 90 bp | CACAGCAAAAGTTGTTCAAACTGTCAGCTTATTCTGTTAGCAGAAAACATTACATGCCATAGAGAAACGTaGATAATGAAAAGCACTCTC | + |
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Preference number: 2 (lower is better) Translates to: HSKSCSNCQLILLAENITCHRET*IMKSTL Trigger: GAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA...TGTAATGTTTTCTGCTAACAGAATAAGCTGACAGTTTGAACAACTTTTGCTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR TCA 90 bp | CACAGCAAAAGTTGTTCAAACTGTCAGCTTATTCTGTTAGCAGAAAACATTACACAGTTTAAATCCACATaGGAGGTAAGATGTGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: HSKSCSNCQLILLAENITQFKST*EVRCAF Trigger: AAAAGCACATCTTACCTCTCATGTGGATTTAAACTG...TGTAATGTTTTCTGCTAACAGAATAAGCTGACAGTTTGAACAACTTTTGCTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR CCA 90 bp | CACAGCAAAAGTTGTTCAAACTGTCAGCTTATTCTGTTAGCAGAAAACATTACAGCAGCTTTCTGTAAATaGCCTCAACACATTTTATCT | + |
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Preference number: 2 (lower is better) Translates to: HSKSCSNCQLILLAENITAAFCK*PQHILS Trigger: AGATAAAATGTGTTGAGGCCATTTACAGAAAGCTGC...TGTAATGTTTTCTGCTAACAGAATAAGCTGACAGTTTGAACAACTTTTGCTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR CCA 90 bp | CACAGCAAAAGTTGTTCAAACTGTCAGCTTATTCTGTTAGCAGAAAACATTACATTCACTCTACAGTTTTaGCCACTAACATTTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: HSKSCSNCQLILLAENITFTLQF*PLTFSL Trigger: GAGAGAAAATGTTAGTGGCCAAAACTGTAGAGTGAA...TGTAATGTTTTCTGCTAACAGAATAAGCTGACAGTTTGAACAACTTTTGCTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR CCA 90 bp | TTACAAAAAGTCTATCTTCTTGTTACAAAGAGGATGAGCAGAAGCATAGAGCATCCTTTAACATATTGGTaGGAAGGCAGTTTAAATCCA | + |
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Preference number: 2 (lower is better) Translates to: LQKVYLLVTKRMSRSIEHPLTYW*EGSLNP Trigger: TGGATTTAAACTGCCTTCCCACCAATATGTTAAAGG...ATGCTCTATGCTTCTGCTCATCCTCTTTGTAACAAGAAGATAGACTTTTTGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR TCA 72 bp | CAGACCATGTGGCTGTCTCTACCCGGCCCAGTCCTCTaGCTAGTCTTCCAAGGGGAAGAGAACTGTGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: QTMWLSLPGPVL*LVFQGEENCGL Trigger: CAGGCCACAGTTCTCTTCCCCTTGGAAGACTAGTCAGAGGACTGGGCCGGGTAGAGACAGCCACATGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR TCA 72 bp | CAAGCATGCAGTTCAGAAGCATGGCAGGCCAGCTCCTaGGCATTCTTGACATGGTTGAAGTGGAGACTGACC | + |
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Preference number: 3 (lower is better) Translates to: QACSSEAWQASS*AFLTWLKWRLT Trigger: GGTCAGTCTCCACTTCAACCATGTCAAGAATGCTCAGGAGCTGGCCTGCCATGCTTCTGAACTGCATGCTTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR GCA 72 bp | GTCTCCACCTCTATCCCAAGACTCCAGGTTTTCCTCTaGCAGGATAATGAATGCCATAACTGGCTGTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: VSTSIPRLQVFL*QDNECHNWLCL Trigger: GAGGCACAGCCAGTTATGGCATTCATTATCCTGGCAGAGGAAAACCTGGAGTCTTGGGATAGAGGTGGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| 3UTR TCA 72 bp | CTACCAAAGCACACGGAACACTGCTGCTGCGTTACCTaGTTTCTCTGCCATTTTCTTGCAATCACTAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: LPKHTEHCCCVT*FLCHFLAITKG Trigger: TCCTTTAGTGATTGCAAGAAAATGGCAGAGAAATCAGGTAACGCAGCAGCAGTGTTCCGTGTGCTTTGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| 3UTR GCA 72 bp | AACTACAAAGACTCCCCGCTTTTCATCACCAATGGCTaGTTTAATTTACGTACGCACAGACCATGTGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: NYKDSPLFITNG*FNLRTHRPCGC Trigger: ACAGCCACATGGTCTGTGCGTACGTAAATTAAAGCAGCCATTGGTGATGAAAAGCGGGGAGTCTTTGTAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR CCA 72 bp | CAGTGCTCTTTCGGACAGTTCCCTCAGGCTCATATTTaGCCACATCTTGTACCACGATGTCATTTTAAGTTT | + |
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Preference number: 3 (lower is better) Translates to: QCSFGQFPQAHI*PHLVPRCHFKF Trigger: AAACTTAAAATGACATCGTGGTACAAGATGTGGCCAAATATGAGCCTGAGGGAACTGTCCGAAAGAGCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR TCA 72 bp | CCACTAAACTTTCTCTGCAGAAAAGCAGATGCAGGATaGGTGAGTAAACTAGTAAAACTGTGGATCAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: PLNFLCRKADAG*VSKLVKLWISL Trigger: GAGGCTGATCCACAGTTTTACTAGTTTACTCACTCATCCTGCATCTGCTTTTCTGCAGAGAAAGTTTAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| 3UTR CCA 72 bp | CTTCTTCTTCTTCTTCTTTATAAAGCCCTGGCAGCCTaGACTCTAATAAACAAGCCAGACTGTCCTCAAACT | + |
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Preference number: 3 (lower is better) Translates to: LLLLLLYKALAA*TLINKPDCPQT Trigger: AGTTTGAGGACAGTCTGGCTTGTTTATTAGAGTCCAGGCTGCCAGGGCTTTATAAAGAAGAAGAAGAAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR-3UTR CAA 90 bp | TTGATACTTTGTGGAATTTGTGGTAGCCAACATACAAACACTTTGCTTGGAAAGGCATTCTTGACATGGTaGAAGTGGAGACTGACCACT | + |
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Preference number: 3 (lower is better) Translates to: LILCGICGSQHTNTLLGKAFLTW*KWRLTT Trigger: AGTGGTCAGTCTCCACTTCAACCATGTCAAGAATGC...CTTTCCAAGCAAAGTGTTTGTATGTTGGCTACCACAAATTCCACAAAGTATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR GCA 72 bp | GGCAGCAAGATTAGGGCTTACCAGACTATTTCAGCATaGTTCACTATTTGGTTTCATGTATGTGCTGATAAT | + |
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Preference number: 3 (lower is better) Translates to: GSKIRAYQTISA*FTIWFHVCADN Trigger: ATTATCAGCACATACATGAAACCAAATAGTGAAGCATGCTGAAATAGTCTGGTAAGCCCTAATCTTGCTGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR TCA 72 bp | CCAGTATTGTGTTGGGAAACCATGCTCACTGTCAGTTaGATCAATTGTAATTATACAGCAAAAGAAGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: PVLCWETMLTVS*INCNYTAKEEE Trigger: CTCCTCTTCTTTTGCTGTATAATTACAATTGATTCAACTGACAGTGAGCATGGTTTCCCAACACAATACTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR TCA 72 bp | CCTGTAACAACCCTGTCTCAAGATGCTACTTTACTGTaGACTCTGAACTTTAAGGGACCATTTATAAATTCT | + |
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Preference number: 3 (lower is better) Translates to: PVTTLSQDATLL*TLNFKGPFINS Trigger: AGAATTTATAAATGGTCCCTTAAAGTTCAGAGTTCACAGTAAAGTAGCATCTTGAGACAGGGTTGTTACAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR CCA 72 bp | TTTGCTTGGAAAGCTGTAACTGATGCTTTGAACATATaGACCTATGATAGGTCCATAGAATTCTTTTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: FAWKAVTDALNI*TYDRSIEFFSS Trigger: GGAAGAAAAGAATTCTATGGACCTATCATAGGTCCATATGTTCAAAGCATCAGTTACAGCTTTCCAAGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR GCA 72 bp | TGCTTCACTATTTGGTTTCATGTATGTGCTGATAATTaGTGTTTTAGAGTGGGAAATAACCCATTTTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: CFTIWFHVCADN*CFRVGNNPFFK Trigger: CTTGAAAAATGGGTTATTTCCCACTCTAAAACAGCAATTATCAGCACATACATGAAACCAAATAGTGAAGCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR TCA 90 bp | AGGCTGGTCCTGGGTGGAGCACTGAGGTCAGCAACATCTGTGACATTATACAACGGTCAGAGGCTGTGCTaGCCCCTGGAGCGGAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: RLVLGGALRSATSVTLYNGQRLC*PLERRP Trigger: GGGCCTCCGCTCCAGGGGTCAGCACAGCCTCTGACC...GTTGTATAATGTCACAGATGTTGCTGACCTCAGTGCTCCACCCAGGACCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS-3UTR CCA 90 bp | ACTAATGTGAGCTGGTGCATGACTTTAATCCCAACACTTGGGGAGGCACAGGATGGCTGTGCTGACCCCTaGAGCGGAGGCCCTGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: TNVSWCMTLIPTLGEAQDGCADP*SGGPAP Trigger: GGGGGCAGGGCCTCCGCTCCAGGGGTCAGCACAGCC...ATCCTGTGCCTCCCCAAGTGTTGGGATTAAAGTCATGCACCAGCTCACATTAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CCA 90 bp | TGTGATATCAGAACTAGGCTCAGAATGCAGAGCCCTGAAGGTGAGAGTGGAACTGGCTGTGCTGACCCCTaGAGCGGAGGCCCTGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: CDIRTRLRMQSPEGESGTGCADP*SGGPAP Trigger: GGGGGCAGGGCCTCCGCTCCAGGGGTCAGCACAGCC...AGTTCCACTCTCACCTTCAGGGCTCTGCATTCTGAGCCTAGTTCTGATATCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS-3UTR GCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCGGCAGTCCTCCGCTGTaGCCCTCAGGGCTGCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: CHRETCIMKSTLSVGHGSGSPPL*PSGLPL Trigger: GAGAGGCAGCCCTGAGGGGCACAGCGGAGGACTGCC...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR GCA 90 bp | CCGTTACCGACCACTAAACTTTCTCTGCAGAAAAGCAGATGCAGGATGAGTGAGGGCAGTCCTCCGCTGTaGCCCTCAGGGCTGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLPTTKLSLQKSRCRMSEGSPPL*PSGLPL Trigger: GAGAGGCAGCCCTGAGGGGCACAGCGGAGGACTGCC...CTCACTCATCCTGCATCTGCTTTTCTGCAGAGAAAGTTTAGTGGTCGGTAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | AGAATGCAGAGCCCTGAAGGTGAGAGTGGAACTAAGGAACAAGGGCCGTTACCGATTTGGGTCCCAGAGTaGGGAGTGGCGGTTAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RMQSPEGESGTKEQGPLPIWVPE*GVAVRG Trigger: TCCCCTAACCGCCACTCCGCACTCTGGGACCCAAAT...CGGTAACGGCCCTTGTTCCTTAGTTCCACTCTCACCTTCAGGGCTCTGCATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | AGAATGCAGAGCCCTGAAGGTGAGAGTGGAACTAAGGAACAAGGGCCGTTACCGAAGCTGAGGAGCACCTaGGCTCACCGTGGACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RMQSPEGESGTKEQGPLPKLRST*AHRGLP Trigger: TGGAAGTCCACGGTGAGCCCAGGTGCTCCTCAGCTT...CGGTAACGGCCCTTGTTCCTTAGTTCCACTCTCACCTTCAGGGCTCTGCATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | AGAATGCAGAGCCCTGAAGGTGAGAGTGGAACTAAGGAACAAGGGCCGTTACCGTCCTTCGTCTTCAGCTaGGGAGAGCCCATTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RMQSPEGESGTKEQGPLPSFVFS*GEPIRR Trigger: CCTCCGAATGGGCTCTCCCCAGCTGAAGACGAAGGA...CGGTAACGGCCCTTGTTCCTTAGTTCCACTCTCACCTTCAGGGCTCTGCATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR TCA 90 bp | GTTAGCACAAGCATGCAGTTCAGAAGCATGGCAGGCCAGCTCCTGAGCATTCTTCTTCTGCTAGAAAGCTaGGGAGCACCTGGGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VSTSMQFRSMAGQLLSILLLLES*GAPGLT Trigger: GGTGAGCCCAGGTGCTCCTCAGCTTTCTAGCAGAAG...AAGAATGCTCAGGAGCTGGCCTGCCATGCTTCTGAACTGCATGCTTGTGCTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR TCA 90 bp | AAAACTGTGGATCAGCCTCTACCAAAGCACACGGAACACTGCTGCTGCGTTACCCTTCTGCTAGAAAGCTaGGGAGCACCTGGGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: KTVDQPLPKHTEHCCCVTLLLES*GAPGLT Trigger: GGTGAGCCCAGGTGCTCCTCAGCTTTCTAGCAGAAG...GGTAACGCAGCAGCAGTGTTCCGTGTGCTTTGGTAGAGGCTGATCCACAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR TCA 90 bp | GTTAGCACAAGCATGCAGTTCAGAAGCATGGCAGGCCAGCTCCTGAGCATTCTTGGAGGGCCTGGCACCTaGGTAGGACACCAAACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSTSMQFRSMAGQLLSILGGPGT*VGHQTR Trigger: TCTAGTTTGGTGTCCTACTCAGGTGCCAGGCCCTCC...AAGAATGCTCAGGAGCTGGCCTGCCATGCTTCTGAACTGCATGCTTGTGCTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCGGTGATCCTGAAGACTaGTGCCCACCGAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CHRETCIMKSTLSVGHGSGDPED*CPPRRQ Trigger: CTGCCTCCTCGGTGGGCAGCAGTCTTCAGGATCACC...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGTCCTGGGTGGAGCACTGAGGTCAGCAACATCTGTGACATTATACAACGGCCCTCTGAGGTCCTaGCTTCTCTTGGTGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLVLGGALRSATSVTLYNGPLRS*LLLVIL Trigger: CAGGATCACCAAGAGAAGGCAGGACCTCAGAGGGCC...GTTGTATAATGTCACAGATGTTGCTGACCTCAGTGCTCCACCCAGGACCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | GTTAGCACAAGCATGCAGTTCAGAAGCATGGCAGGCCAGCTCCTGAGCATTCTTTGTGCCCCTCAGGGCTaGCTCTCTGTTCTCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSTSMQFRSMAGQLLSILCAPQG*LSVLPR Trigger: TCTTGGGAGAACAGAGAGGCAGCCCTGAGGGGCACA...AAGAATGCTCAGGAGCTGGCCTGCCATGCTTCTGAACTGCATGCTTGTGCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | GTTAGCACAAGCATGCAGTTCAGAAGCATGGCAGGCCAGCTCCTGAGCATTCTTGCCGGGCAGCTAACATaGTGCCTGCCTCTCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSTSMQFRSMAGQLLSILAGQLT*CLPLFC Trigger: ACAGAAGAGAGGCAGGCAGCATGTTAGCTGCCCGGC...AAGAATGCTCAGGAGCTGGCCTGCCATGCTTCTGAACTGCATGCTTGTGCTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGCCTCAGCCAGATGTGATATCAGAACTAGGCTCAGAATGCAGAGCCCTAGGAGGCAGAGAATTTaGCAGCGCACAGGCCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GCASARCDIRTRLRMQSPRRQRI*QRTGPV Trigger: TACTGGGCCTGTGCGCTGCCAAATTCTCTGCCTCCT...AGGGCTCTGCATTCTGAGCCTAGTTCTGATATCACATCTGGCTGAGGCACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | GTTAGCACAAGCATGCAGTTCAGAAGCATGGCAGGCCAGCTCCTGAGCATTCTTAAGGCTGGTCCTGGGTaGAGCACTGAGGTCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSTSMQFRSMAGQLLSILKAGPG*STEVSN Trigger: GTTGCTGACCTCAGTGCTCCACCCAGGACCAGCCTT...AAGAATGCTCAGGAGCTGGCCTGCCATGCTTCTGAACTGCATGCTTGTGCTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR TCA 90 bp | AGAGAAGTCTACATGGCACATCTGACTGAGCTGCTATTTAACTTGTCCGAAGGCCGGGAGAGGGAGACCTaGGGTGTGTGGTTGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: REVYMAHLTELLFNLSEGRERET*GVWLLA Trigger: AGCCAGCAACCACACACCTCAGGTCTCCCTCTCCCG...GCCTTCGGACAAGTTAAATAGCAGCTCAGTCAGATGTGCCATGTAGACTTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | GAACAAGGGCCGTTACCGACCACTAAACTTTCTCTGCAGAAAAGCAGATGCAGGCACCACAGAGTGGGCTaGCTGGGGTACAGTCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: EQGPLPTTKLSLQKSRCRHHRVG*LGYSQL Trigger: GAGTTGACTGTACCCCAGGCAGCCCACTCTGTGGTG...CCTGCATCTGCTTTTCTGCAGAGAAAGTTTAGTGGTCGGTAACGGCCCTTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGACTCCAGGTTTTCCTCTGCCAGGATAATGAATGCCATAACTGGCTGTGCGCCGGGCAGCTAACATaGTGCCTGCCTCTCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRLQVFLCQDNECHNWLCAGQLT*CLPLFC Trigger: ACAGAAGAGAGGCAGGCAGCATGTTAGCTGCCCGGC...GCACAGCCAGTTATGGCATTCATTATCCTGGCAGAGGAAAACCTGGAGTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCCCGACTTACTAAGGGTGAGCATTTCACTCTACAGTTTTGGCCACTAACACGGGAGAGGGAGACCTaGGGTGTGTGGTTGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSRLTKGEHFTLQFWPLTRERET*GVWLLA Trigger: AGCCAGCAACCACACACCTCAGGTCTCCCTCTCCCG...TGTTAGTGGCCAAAACTGTAGAGTGAAATGCTCACCCTTAGTAAGTCGGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCTCCCAGAGTTCCACCTaGCACAGGATGGGACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CHRETCIMKSTLSVGHGSSQSST*HRMGPL Trigger: CAAAGGTCCCATCCTGTGGCAGGTGGAACTCTGGGA...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | ACTAATGTGAGCTGGTGCATGACTTTAATCCCAACACTTGGGGAGGCACAGGATGATCCTGAAGACTGCTaGCCACCGAGGAGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TNVSWCMTLIPTLGEAQDDPEDC*PPRRQR Trigger: TCTCTGCCTCCTCGGTGGGCAGCAGTCTTCAGGATC...ATCCTGTGCCTCCCCAAGTGTTGGGATTAAAGTCATGCACCAGCTCACATTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | TTTGTCTCCACCTCTATCCCAAGACTCCAGGTTTTCCTCTGCCAGGATAATGAAGGTGATCCTGAAGACTaGTGCCCACCGAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FVSTSIPRLQVFLCQDNEGDPED*CPPRRQ Trigger: CTGCCTCCTCGGTGGGCAGCAGTCTTCAGGATCACC...TTCATTATCCTGGCAGAGGAAAACCTGGAGTCTTGGGATAGAGGTGGAGACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | ACTAATGTGAGCTGGTGCATGACTTTAATCCCAACACTTGGGGAGGCACAGGATCACCACAGAGTGGGCTaGCTGGGGTACAGTCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: TNVSWCMTLIPTLGEAQDHHRVG*LGYSQL Trigger: GAGTTGACTGTACCCCAGGCAGCCCACTCTGTGGTG...ATCCTGTGCCTCCCCAAGTGTTGGGATTAAAGTCATGCACCAGCTCACATTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | CCTACTTCAGGCATGTTCAGGGCTCAGTACAACAAGAGAAGTCTACATGGCACATGTGCCCCTCAGGGCTaGCTCTCTGTTCTCCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTSGMFRAQYNKRSLHGTCAPQG*LSVLPR Trigger: TCTTGGGAGAACAGAGAGGCAGCCCTGAGGGGCACA...TGTGCCATGTAGACTTCTCTTGTTGTACTGAGCCCTGAACATGCCTGAAGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | GTTAGCACAAGCATGCAGTTCAGAAGCATGGCAGGCCAGCTCCTGAGCATTCTTGTGCCACCCTGTTTCTaGAATATTCCCAAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSTSMQFRSMAGQLLSILVPPCF*NIPKGQ Trigger: CTGGCCCTTGGGAATATTCCAGAAACAGGGTGGCAC...AAGAATGCTCAGGAGCTGGCCTGCCATGCTTCTGAACTGCATGCTTGTGCTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | ACTAATGTGAGCTGGTGCATGACTTTAATCCCAACACTTGGGGAGGCACAGGATTCCTTCGTCTTCAGCTaGGGAGAGCCCATTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TNVSWCMTLIPTLGEAQDSFVFS*GEPIRR Trigger: CCTCCGAATGGGCTCTCCCCAGCTGAAGACGAAGGA...ATCCTGTGCCTCCCCAAGTGTTGGGATTAAAGTCATGCACCAGCTCACATTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | ACTAATGTGAGCTGGTGCATGACTTTAATCCCAACACTTGGGGAGGCACAGGATCCTGAGTCAGCCTGGTaGGCAGAGCAAGGTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TNVSWCMTLIPTLGEAQDPESAW*AEQGTP Trigger: AGGAGTACCTTGCTCTGCCCACCAGGCTGACTCAGG...ATCCTGTGCCTCCCCAAGTGTTGGGATTAAAGTCATGCACCAGCTCACATTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | ATGGTCATTTGTCTCCACCTCTATCCCAAGACTCCAGGTTTTCCTCTGCCAGGAAGACCTGAGTCAGCCTaGTGGGCAGAGCAAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: MVICLHLYPKTPGFPLPGRPESA*WAEQGT Trigger: AGTACCTTGCTCTGCCCACCAGGCTGACTCAGGTCT...TCCTGGCAGAGGAAAACCTGGAGTCTTGGGATAGAGGTGGAGACAAATGACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR TCA 90 bp | TTTGTCTCCACCTCTATCCCAAGACTCCAGGTTTTCCTCTGCCAGGATAATGAAGCAAAAGAGGCCCTCTaGGGTCCTGCCTTCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FVSTSIPRLQVFLCQDNEAKEAL*GPAFSW Trigger: CCAAGAGAAGGCAGGACCTCAGAGGGCCTCTTTTGC...TTCATTATCCTGGCAGAGGAAAACCTGGAGTCTTGGGATAGAGGTGGAGACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | GATGTGATATCAGAACTAGGCTCAGAATGCAGAGCCCTGAAGGTGAGAGTGGAATCCCAGAGTTCCACCTaGCACAGGATGGGACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DVISELGSECRALKVRVESQSST*HRMGPL Trigger: CAAAGGTCCCATCCTGTGGCAGGTGGAACTCTGGGA...TTCCACTCTCACCTTCAGGGCTCTGCATTCTGAGCCTAGTTCTGATATCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | AGTGATGAAGTCTGCCTACTTCAGGCATGTTCAGGGCTCAGTACAACAAGAGAAGATCCTGAAGACTGCTaGCCACCGAGGAGGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SDEVCLLQACSGLSTTREDPEDC*PPRRQR Trigger: TCTCTGCCTCCTCGGTGGGCAGCAGTCTTCAGGATC...TTCTCTTGTTGTACTGAGCCCTGAACATGCCTGAAGTAGGCAGACTTCATCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | GATGTGATATCAGAACTAGGCTCAGAATGCAGAGCCCTGAAGGTGAGAGTGGAAGGGCAGCTAACATGCTaGCTGCCTCTCTTCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DVISELGSECRALKVRVEGQLTC*LPLFCL Trigger: CAGACAGAAGAGAGGCAGGCAGCATGTTAGCTGCCC...TTCCACTCTCACCTTCAGGGCTCTGCATTCTGAGCCTAGTTCTGATATCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCGAAGTTCCAGAAGGATaGTTCCTGTGGCTGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CHRETCIMKSTLSVGHGSEVPEG*FLWLES Trigger: GGACTCCAGCCACAGGAAGCATCCTTCTGGAACTTC...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | GTTAGCACAAGCATGCAGTTCAGAAGCATGGCAGGCCAGCTCCTGAGCATTCTTAGAGAAGCTTTCTCCTaGTCATCTGTCGTCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSTSMQFRSMAGQLLSILREAFS*SSVVLG Trigger: TCCCAGGACGACAGATGAGCAGGAGAAAGCTTCTCT...AAGAATGCTCAGGAGCTGGCCTGCCATGCTTCTGAACTGCATGCTTGTGCTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | AGTGATGAAGTCTGCCTACTTCAGGCATGTTCAGGGCTCAGTACAACAAGAGAAGCTGGAAGTAGGTCCTaGGAGGCAGGAAGCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDEVCLLQACSGLSTTREAGSRS*EAGSLS Trigger: AGACAGGCTTCCTGCCTCCCAGGACCTACTTCCAGC...TTCTCTTGTTGTACTGAGCCCTGAACATGCCTGAAGTAGGCAGACTTCATCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | ACTAATGTGAGCTGGTGCATGACTTTAATCCCAACACTTGGGGAGGCACAGGATACTTTCAGGTTGCTTTaGGAGCTGAGGCCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TNVSWCMTLIPTLGEAQDTFRLL*ELRPRP Trigger: AGGCCTGGGCCTCAGCTCCCAAAGCAACCTGAAAGT...ATCCTGTGCCTCCCCAAGTGTTGGGATTAAAGTCATGCACCAGCTCACATTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | AGTGATGAAGTCTGCCTACTTCAGGCATGTTCAGGGCTCAGTACAACAAGAGAACCTGAGTCAGCCTGGTaGGCAGAGCAAGGTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDEVCLLQACSGLSTTREPESAW*AEQGTP Trigger: AGGAGTACCTTGCTCTGCCCACCAGGCTGACTCAGG...TTCTCTTGTTGTACTGAGCCCTGAACATGCCTGAAGTAGGCAGACTTCATCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | TGTGATATCAGAACTAGGCTCAGAATGCAGAGCCCTGAAGGTGAGAGTGGAACTGAAGGATGCTTCCTGTaGCTGGAGTCCAATGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CDIRTRLRMQSPEGESGTEGCFL*LESNVG Trigger: CCCCACATTGGACTCCAGCCACAGGAAGCATCCTTC...AGTTCCACTCTCACCTTCAGGGCTCTGCATTCTGAGCCTAGTTCTGATATCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGACTCCAGGTTTTCCTCTGCCAGGATAATGAATGCCATAACTGGCTGTGCGCTCATCTGTCGTCCTaGGAAGTGTCTCTCCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PRLQVFLCQDNECHNWLCAHLSS*EVSLQL Trigger: TAGCTGGAGAGACACTTCCCAGGACGACAGATGAGC...GCACAGCCAGTTATGGCATTCATTATCCTGGCAGAGGAAAACCTGGAGTCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | GAACAAGGGCCGTTACCGACCACTAAACTTTCTCTGCAGAAAAGCAGATGCAGGATGCTGTTGGTGGGCTaGGGAAACATCACTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EQGPLPTTKLSLQKSRCRMLLVG*GNITPS Trigger: GGAAGGAGTGATGTTTCCCCAGCCCACCAACAGCAT...CCTGCATCTGCTTTTCTGCAGAGAAAGTTTAGTGGTCGGTAACGGCCCTTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR TCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCATGGGACCTTTGTGTTaGCAGACACTTCTGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CHRETCIMKSTLSVGHGSMGPLC*QTLLPQ Trigger: CTGAGGCAGAAGTGTCTGTCAACACAAAGGTCCCAT...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR TCA 90 bp | CACAGCAAAAGTTGTTCAAACTGTCAGCTTATTCTGTTAGCAGAAAACATTACAGGTCAGAGGCTGTGCTaGCCCCTGGAGCGGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HSKSCSNCQLILLAENITGQRLC*PLERRP Trigger: GGGCCTCCGCTCCAGGGGTCAGCACAGCCTCTGACC...TGTAATGTTTTCTGCTAACAGAATAAGCTGACAGTTTGAACAACTTTTGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR TCA 90 bp | AGTGATGAAGTCTGCCTACTTCAGGCATGTTCAGGGCTCAGTACAACAAGAGAATGGCCCACAGGCCCTTaGAAGGAAGTTCCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDEVCLLQACSGLSTTREWPTGP*KEVPEG Trigger: TCCTTCTGGAACTTCCTTTCAAGGGCCTGTGGGCCA...TTCTCTTGTTGTACTGAGCCCTGAACATGCCTGAAGTAGGCAGACTTCATCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | CCTACTTCAGGCATGTTCAGGGCTCAGTACAACAAGAGAAGTCTACATGGCACAAGAAAACTCCCGAGATaGAGCCAGGGTCAGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTSGMFRAQYNKRSLHGTRKLPR*SQGQLQ Trigger: CTGAAGCTGACCCTGGCTGCATCTCGGGAGTTTTCT...TGTGCCATGTAGACTTCTCTTGTTGTACTGAGCCCTGAACATGCCTGAAGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCACAGGCCCAGTATTCTaGCTGAAAGGAGAGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CHRETCIMKSTLSVGHGSTGPVF*LKGEVS Trigger: AGACACCTCTCCTTTCAGGCAGAATACTGGGCCTGT...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGCCTCAGCCAGATGTGATATCAGAACTAGGCTCAGAATGCAGAGCCCTAGGATGACAAGCTTGTaGCACCCTGTTTCTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: GCASARCDIRTRLRMQSPRMTSL*HPVSGI Trigger: TATTCCAGAAACAGGGTGGCACAAGCTTGTCATCCT...AGGGCTCTGCATTCTGAGCCTAGTTCTGATATCACATCTGGCTGAGGCACAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCGACTTACTAAGGGTGAGCATTTCACTCTACAGTTTTGGCCACTAACAGCTGGAAGTAGGTCCTaGGAGGCAGGAAGCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSRLTKGEHFTLQFWPLTAGSRS*EAGSLS Trigger: AGACAGGCTTCCTGCCTCCCAGGACCTACTTCCAGC...TGTTAGTGGCCAAAACTGTAGAGTGAAATGCTCACCCTTAGTAAGTCGGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGTCTACATGGCACATCTGACTGAGCTGCTATTTAACTTGTCCGAAGGCACTTTCAGGTTGCTTTaGGAGCTGAGGCCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: REVYMAHLTELLFNLSEGTFRLL*ELRPRP Trigger: AGGCCTGGGCCTCAGCTCCCAAAGCAACCTGAAAGT...GCCTTCGGACAAGTTAAATAGCAGCTCAGTCAGATGTGCCATGTAGACTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | TGTGATATCAGAACTAGGCTCAGAATGCAGAGCCCTGAAGGTGAGAGTGGAACTGTGCCACCCTGTTTCTaGAATATTCCCAAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CDIRTRLRMQSPEGESGTVPPCF*NIPKGQ Trigger: CTGGCCCTTGGGAATATTCCAGAAACAGGGTGGCAC...AGTTCCACTCTCACCTTCAGGGCTCTGCATTCTGAGCCTAGTTCTGATATCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTCATTTGTCTCCACCTCTATCCCAAGACTCCAGGTTTTCCTCTGCCAGGACTGTCTGGGAAAGGGTaGCTCTTTCTCCTTCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MVICLHLYPKTPGFPLPGLSGKG*LFLLRL Trigger: AAGACGAAGGAGAAAGAGCCACCCTTTCCCAGACAG...TCCTGGCAGAGGAAAACCTGGAGTCTTGGGATAGAGGTGGAGACAAATGACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCTGCCTCTCTTCTGTCTaGGAAAGGGTGGCTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CHRETCIMKSTLSVGHGSCLSSV*ERVALS Trigger: AGAAAGAGCCACCCTTTCCCAGACAGAAGAGAGGCA...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | GAACAAGGGCCGTTACCGACCACTAAACTTTCTCTGCAGAAAAGCAGATGCAGGTGCCTCTCTTCTGTCTaGGAAAGGGTGGCTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EQGPLPTTKLSLQKSRCRCLSSV*ERVALS Trigger: AGAAAGAGCCACCCTTTCCCAGACAGAAGAGAGGCA...CCTGCATCTGCTTTTCTGCAGAGAAAGTTTAGTGGTCGGTAACGGCCCTTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR TCA 90 bp | GTTAGCACAAGCATGCAGTTCAGAAGCATGGCAGGCCAGCTCCTGAGCATTCTTATAGTTCCAAAGACTTaGAGAGCTGGAAGTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSTSMQFRSMAGQLLSILIVPKT*RAGSRS Trigger: GGACCTACTTCCAGCTCTTCAAGTCTTTGGAACTAT...AAGAATGCTCAGGAGCTGGCCTGCCATGCTTCTGAACTGCATGCTTGTGCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR TCA 90 bp | ACAACAAGAGAAGTCTACATGGCACATCTGACTGAGCTGCTATTTAACTTGTCCGGAGGGCCTGGCACCTaGGTAGGACACCAAACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TTREVYMAHLTELLFNLSGGPGT*VGHQTR Trigger: TCTAGTTTGGTGTCCTACTCAGGTGCCAGGCCCTCC...GGACAAGTTAAATAGCAGCTCAGTCAGATGTGCCATGTAGACTTCTCTTGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | CCGTTACCGACCACTAAACTTTCTCTGCAGAAAAGCAGATGCAGGATGAGTGAGACAGGCCCAGTATTCTaGCTGAAAGGAGAGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPTTKLSLQKSRCRMSETGPVF*LKGEVS Trigger: AGACACCTCTCCTTTCAGGCAGAATACTGGGCCTGT...CTCACTCATCCTGCATCTGCTTTTCTGCAGAGAAAGTTTAGTGGTCGGTAACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCCCGACTTACTAAGGGTGAGCATTTCACTCTACAGTTTTGGCCACTAACAGGGCAGCTAACATGCTaGCTGCCTCTCTTCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSRLTKGEHFTLQFWPLTGQLTC*LPLFCL Trigger: CAGACAGAAGAGAGGCAGGCAGCATGTTAGCTGCCC...TGTTAGTGGCCAAAACTGTAGAGTGAAATGCTCACCCTTAGTAAGTCGGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | GTTAGCACAAGCATGCAGTTCAGAAGCATGGCAGGCCAGCTCCTGAGCATTCTTAATGTCTGCACACACTaGACTAGAGAAGCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSTSMQFRSMAGQLLSILNVCTH*TREAFS Trigger: GGAGAAAGCTTCTCTAGTGCAGTGTGTGCAGACATT...AAGAATGCTCAGGAGCTGGCCTGCCATGCTTCTGAACTGCATGCTTGTGCTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCGACTTACTAAGGGTGAGCATTTCACTCTACAGTTTTGGCCACTAACACGGGAGAGGAGACATTaGCAAAAGAGGCCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSRLTKGEHFTLQFWPLTRERRH*QKRPSE Trigger: CTCAGAGGGCCTCTTTTGCCAATGTCTCCTCTCCCG...TGTTAGTGGCCAAAACTGTAGAGTGAAATGCTCACCCTTAGTAAGTCGGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGCTGCGTTACCTGATTTCTCTGCCATTTTCTTGCAATCACTAAAGGAGCGGGAGAGGAGACATTaGCAAAAGAGGCCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TAAALPDFSAIFLQSLKERERRH*QKRPSE Trigger: CTCAGAGGGCCTCTTTTGCCAATGTCTCCTCTCCCG...CTCCTTTAGTGATTGCAAGAAAATGGCAGAGAAATCAGGTAACGCAGCAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | TTGATACTTTGTGGAATTTGTGGTAGCCAACATACAAACACTTTGCTTGGAAAGGCCCCCACCACAGAGTaGGCTGCCTGGGGTACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LILCGICGSQHTNTLLGKAPTTE*AAWGTV Trigger: GACTGTACCCCAGGCAGCCCACTCTGTGGTGGGGGC...CTTTCCAAGCAAAGTGTTTGTATGTTGGCTACCACAAATTCCACAAAGTATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | TGGCATACAAATTTTCTAGAGTTTTCTTTCAGATGGTCATTTGTCTCCACCTCTGCCCCCACCACAGAGTaGGCTGCCTGGGGTACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WHTNFLEFSFRWSFVSTSAPTTE*AAWGTV Trigger: GACTGTACCCCAGGCAGCCCACTCTGTGGTGGGGGC...AGAGGTGGAGACAAATGACCATCTGAAAGAAAACTCTAGAAAATTTGTATGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCGACTTACTAAGGGTGAGCATTTCACTCTACAGTTTTGGCCACTAACAAGGAGGCAGAGAATTTaGCAGCGCACAGGCCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSRLTKGEHFTLQFWPLTRRQRI*QRTGPV Trigger: TACTGGGCCTGTGCGCTGCCAAATTCTCTGCCTCCT...TGTTAGTGGCCAAAACTGTAGAGTGAAATGCTCACCCTTAGTAAGTCGGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | CCGTTACCGACCACTAAACTTTCTCTGCAGAAAAGCAGATGCAGGATGAGTGAGGGGGTTGATGCAAGCTaGTTCCAGGATGACAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLPTTKLSLQKSRCRMSEGVDAS*FQDDKL Trigger: AAGCTTGTCATCCTGGAACCAGCTTGCATCAACCCC...CTCACTCATCCTGCATCTGCTTTTCTGCAGAGAAAGTTTAGTGGTCGGTAACGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR TCA 90 bp | AGTGATGAAGTCTGCCTACTTCAGGCATGTTCAGGGCTCAGTACAACAAGAGAACCAGCGCTTAAGACATaGCTCTCTGGCTCCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SDEVCLLQACSGLSTTREPALKT*LSGSRK Trigger: TTTTCTGGAGCCAGAGAGTCATGTCTTAAGCGCTGG...TTCTCTTGTTGTACTGAGCCCTGAACATGCCTGAAGTAGGCAGACTTCATCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCCCGACTTACTAAGGGTGAGCATTTCACTCTACAGTTTTGGCCACTAACAAGAAAACTCCCGAGATaGAGCCAGGGTCAGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSRLTKGEHFTLQFWPLTRKLPR*SQGQLQ Trigger: CTGAAGCTGACCCTGGCTGCATCTCGGGAGTTTTCT...TGTTAGTGGCCAAAACTGTAGAGTGAAATGCTCACCCTTAGTAAGTCGGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCCGACAGCAAAATGTCTaGACACACTGCACTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CHRETCIMKSTLSVGHGSRQQNV*THCTRE Trigger: TTCTCTAGTGCAGTGTGTGCAGACATTTTGCTGTCG...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCGACTTACTAAGGGTGAGCATTTCACTCTACAGTTTTGGCCACTAACAGCCCAACACCTGAGATaGATCAAGCGTAGCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSRLTKGEHFTLQFWPLTAQHLR*IKRSLE Trigger: TTCCAGGCTACGCTTGATCCATCTCAGGTGTTGGGC...TGTTAGTGGCCAAAACTGTAGAGTGAAATGCTCACCCTTAGTAAGTCGGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR TCA 90 bp | ATCTGTGACATTATACAACCAGCAGATCAGCTCTTCCAGCCGACAGCAAAATGTATGGGACCTTTGTGTTaGCAGACACTTCTGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ICDIIQPADQLFQPTAKCMGPLC*QTLLPQ Trigger: CTGAGGCAGAAGTGTCTGTCAACACAAAGGTCCCAT...ACATTTTGCTGTCGGCTGGAAGAGCTGATCTGCTGGTTGTATAATGTCACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR TCA 90 bp | TTGATACTTTGTGGAATTTGTGGTAGCCAACATACAAACACTTTGCTTGGAAAGGCCTGTTGTCAGGGATaGGGGTGCAGCCAGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LILCGICGSQHTNTLLGKACCQG*GCSQPT Trigger: TGTTGGCTGGCTGCACCCTCATCCCTGACAACAGGC...CTTTCCAAGCAAAGTGTTTGTATGTTGGCTACCACAAATTCCACAAAGTATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCCCGACTTACTAAGGGTGAGCATTTCACTCTACAGTTTTGGCCACTAACATTCATGTGGGTGTTCTaGTGCTGTTGGCCTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSRLTKGEHFTLQFWPLTFMWVF*CCWPVV Trigger: GACAACAGGCCAACAGCAGCAGAACACCCACATGAA...TGTTAGTGGCCAAAACTGTAGAGTGAAATGCTCACCCTTAGTAAGTCGGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | CCTACTTCAGGCATGTTCAGGGCTCAGTACAACAAGAGAAGTCTACATGGCACATTTACCTGCACACACTaGACTAGAGAAGCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTSGMFRAQYNKRSLHGTFTCTH*TREAFS Trigger: GGAGAAAGCTTCTCTAGTGCAGTGTGTGCAGGTAAA...TGTGCCATGTAGACTTCTCTTGTTGTACTGAGCCCTGAACATGCCTGAAGTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | CCGTTACCGACCACTAAACTTTCTCTGCAGAAAAGCAGATGCAGGATGAGTGAGCTGTCTTCCTCCATTTaGCTGCCCATAGAGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLPTTKLSLQKSRCRMSELSSSI*LPIECK Trigger: TTTACACTCTATGGGCAGCCAAATGGAGGAAGACAG...CTCACTCATCCTGCATCTGCTTTTCTGCAGAGAAAGTTTAGTGGTCGGTAACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | TGTGATATCAGAACTAGGCTCAGAATGCAGAGCCCTGAAGGTGAGAGTGGAACTTTCATACTCTTTATTTaGGTCCCAGAGTGCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CDIRTRLRMQSPEGESGTFILFI*VPECGV Trigger: CACTCCGCACTCTGGGACCCAAATAAAGAGTATGAA...AGTTCCACTCTCACCTTCAGGGCTCTGCATTCTGAGCCTAGTTCTGATATCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGCTGCGTTACCTGATTTCTCTGCCATTTTCTTGCAATCACTAAAGGAGTCTGGCTCCAGAAAATaGCAGAGTAGGCACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TAAALPDFSAIFLQSLKESGSRK*QSRHFC Trigger: GCAGAAGTGCCTACTCTGCCATTTTCTGGAGCCAGA...CTCCTTTAGTGATTGCAAGAAAATGGCAGAGAAATCAGGTAACGCAGCAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGTGACATTATACAACCAGCAGATCAGCTCTTCCAGCCGACAGCAAAATGTGAGACCCCGAGGGTCTaGTTACTCATCAGACTACTT | + |
|
Preference number: 4 (lower is better) Translates to: ICDIIQPADQLFQPTAKCETPRV*LLIRLL Trigger: AAGTAGTCTGATGAGTAACCAGACCCTCGGGGTCTC...ACATTTTGCTGTCGGCTGGAAGAGCTGATCTGCTGGTTGTATAATGTCACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR TCA 90 bp | TTTGTCTCCACCTCTATCCCAAGACTCCAGGTTTTCCTCTGCCAGGATAATGAAATAGTTCCAAAGACTTaGAGAGCTGGAAGTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FVSTSIPRLQVFLCQDNEIVPKT*RAGSRS Trigger: GGACCTACTTCCAGCTCTTCAAGTCTTTGGAACTAT...TTCATTATCCTGGCAGAGGAAAACCTGGAGTCTTGGGATAGAGGTGGAGACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR TCA 90 bp | TTGATACTTTGTGGAATTTGTGGTAGCCAACATACAAACACTTTGCTTGGAAAGCTGAGGCCCAACACCTaGGATGGATCAAGCGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LILCGICGSQHTNTLLGKLRPNT*DGSSVA Trigger: GGCTACGCTTGATCCATCTCAGGTGTTGGGCCTCAG...CTTTCCAAGCAAAGTGTTTGTATGTTGGCTACCACAAATTCCACAAAGTATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | TTGATACTTTGTGGAATTTGTGGTAGCCAACATACAAACACTTTGCTTGGAAAGATTTGGGTCCCAGAGTaGGGAGTGGCGGTTAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LILCGICGSQHTNTLLGKIWVPE*GVAVRG Trigger: TCCCCTAACCGCCACTCCGCACTCTGGGACCCAAAT...CTTTCCAAGCAAAGTGTTTGTATGTTGGCTACCACAAATTCCACAAAGTATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR TCA 90 bp | TTACAAAAAGTCTATCTTCTTGTTACAAAGAGGATGAGCAGAAGCATAGAGCATGCAAAAGAGGCCCTCTaGGGTCCTGCCTTCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQKVYLLVTKRMSRSIEHAKEAL*GPAFSW Trigger: CCAAGAGAAGGCAGGACCTCAGAGGGCCTCTTTTGC...ATGCTCTATGCTTCTGCTCATCCTCTTTGTAACAAGAAGATAGACTTTTTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCCCGACTTACTAAGGGTGAGCATTTCACTCTACAGTTTTGGCCACTAACATTATCCAACAGGCACTaGAGAAGAATCTCTCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSRLTKGEHFTLQFWPLTLSNRH*RRISPF Trigger: GAAGGGAGAGATTCTTCTTCAGTGCCTGTTGGATAA...TGTTAGTGGCCAAAACTGTAGAGTGAAATGCTCACCCTTAGTAAGTCGGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | TTACAAAAAGTCTATCTTCTTGTTACAAAGAGGATGAGCAGAAGCATAGAGCATGGCCCTCTGAGGTCCTaGCTTCTCTTGGTGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQKVYLLVTKRMSRSIEHGPLRS*LLLVIL Trigger: CAGGATCACCAAGAGAAGGCAGGACCTCAGAGGGCC...ATGCTCTATGCTTCTGCTCATCCTCTTTGTAACAAGAAGATAGACTTTTTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | CACAGCAAAAGTTGTTCAAACTGTCAGCTTATTCTGTTAGCAGAAAACATTACAAAGCTGAGGAGCACCTaGGCTCACCGTGGACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSKSCSNCQLILLAENITKLRST*AHRGLP Trigger: TGGAAGTCCACGGTGAGCCCAGGTGCTCCTCAGCTT...TGTAATGTTTTCTGCTAACAGAATAAGCTGACAGTTTGAACAACTTTTGCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCGACTTACTAAGGGTGAGCATTTCACTCTACAGTTTTGGCCACTAACATTCATACTCTTTATTTaGGTCCCAGAGTGCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSRLTKGEHFTLQFWPLTFILFI*VPECGV Trigger: CACTCCGCACTCTGGGACCCAAATAAAGAGTATGAA...TGTTAGTGGCCAAAACTGTAGAGTGAAATGCTCACCCTTAGTAAGTCGGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR TCA 90 bp | TTACAAAAAGTCTATCTTCTTGTTACAAAGAGGATGAGCAGAAGCATAGAGCATTGGCCCACAGGCCCTTaGAAGGAAGTTCCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQKVYLLVTKRMSRSIEHWPTGP*KEVPEG Trigger: TCCTTCTGGAACTTCCTTTCAAGGGCCTGTGGGCCA...ATGCTCTATGCTTCTGCTCATCCTCTTTGTAACAAGAAGATAGACTTTTTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | TGGCATACAAATTTTCTAGAGTTTTCTTTCAGATGGTCATTTGTCTCCACCTCTGAAGTTCCAGAAGGATaGTTCCTGTGGCTGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WHTNFLEFSFRWSFVSTSEVPEG*FLWLES Trigger: GGACTCCAGCCACAGGAAGCATCCTTCTGGAACTTC...AGAGGTGGAGACAAATGACCATCTGAAAGAAAACTCTAGAAAATTTGTATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAAGTCTACATGGCACATCTGACTGAGCTGCTATTTAACTTGTCCGAAGGCGTGAACATTTTTACCTaGACACACTGCACTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: REVYMAHLTELLFNLSEGVNIFT*THCTRE Trigger: TTCTCTAGTGCAGTGTGTGCAGGTAAAAATGTTCAC...GCCTTCGGACAAGTTAAATAGCAGCTCAGTCAGATGTGCCATGTAGACTTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR CCA 90 bp | CACAGCAAAAGTTGTTCAAACTGTCAGCTTATTCTGTTAGCAGAAAACATTACAAGACCTGAGTCAGCCTaGTGGGCAGAGCAAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: HSKSCSNCQLILLAENITRPESA*WAEQGT Trigger: AGTACCTTGCTCTGCCCACCAGGCTGACTCAGGTCT...TGTAATGTTTTCTGCTAACAGAATAAGCTGACAGTTTGAACAACTTTTGCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | CACAGCAAAAGTTGTTCAAACTGTCAGCTTATTCTGTTAGCAGAAAACATTACAGAAGGATGCTTCCTGTaGCTGGAGTCCAATGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSKSCSNCQLILLAENITEGCFL*LESNVG Trigger: CCCCACATTGGACTCCAGCCACAGGAAGCATCCTTC...TGTAATGTTTTCTGCTAACAGAATAAGCTGACAGTTTGAACAACTTTTGCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | TGGCATACAAATTTTCTAGAGTTTTCTTTCAGATGGTCATTTGTCTCCACCTCTGAGACATGCTGTTGGTaGGCTGGGGAAACATCACTC | + |
|
Preference number: 4 (lower is better) Translates to: WHTNFLEFSFRWSFVSTSETCCW*AGETSL Trigger: GAGTGATGTTTCCCCAGCCCACCAACAGCATGTCTC...AGAGGTGGAGACAAATGACCATCTGAAAGAAAACTCTAGAAAATTTGTATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| 3UTR CAA 72 bp | TCGGACAGTTCCCTCAGGCTCATATTTGGCCACATCTaGTACCACGATGTCATTTTAAGTTTCAAAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SDSSLRLIFGHI*YHDVILSFKAV Trigger: AACAGCTTTGAAACTTAAAATGACATCGTGGTACAAGATGTGGCCAAATATGAGCCTGAGGGAACTGTCCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR GCA 90 bp | TGGCATACAAATTTTCTAGAGTTTTCTTTCAGATGGTCATTTGTCTCCACCTCTAGAGAAGCTTTCTCCTaGTCATCTGTCGTCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WHTNFLEFSFRWSFVSTSREAFS*SSVVLG Trigger: TCCCAGGACGACAGATGAGCAGGAGAAAGCTTCTCT...AGAGGTGGAGACAAATGACCATCTGAAAGAAAACTCTAGAAAATTTGTATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
||
| CDS-3UTR GCA 90 bp | TTACAAAAAGTCTATCTTCTTGTTACAAAGAGGATGAGCAGAAGCATAGAGCATATGTGGGTGTTCTGCTaGTGTTGGCCTGTTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQKVYLLVTKRMSRSIEHMWVFC*CWPVVR Trigger: CCTGACAACAGGCCAACAGCAGCAGAACACCCACAT...ATGCTCTATGCTTCTGCTCATCCTCTTTGTAACAAGAAGATAGACTTTTTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
||
| CDS-3UTR CCA 90 bp | CACAGCAAAAGTTGTTCAAACTGTCAGCTTATTCTGTTAGCAGAAAACATTACAGCTCATCTGTCGTCCTaGGAAGTGTCTCTCCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HSKSCSNCQLILLAENITAHLSS*EVSLQL Trigger: TAGCTGGAGAGACACTTCCCAGGACGACAGATGAGC...TGTAATGTTTTCTGCTAACAGAATAAGCTGACAGTTTGAACAACTTTTGCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR TCA 90 bp | CACAGCAAAAGTTGTTCAAACTGTCAGCTTATTCTGTTAGCAGAAAACATTACACCAGCGCTTAAGACATaGCTCTCTGGCTCCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSKSCSNCQLILLAENITPALKT*LSGSRK Trigger: TTTTCTGGAGCCAGAGAGTCATGTCTTAAGCGCTGG...TGTAATGTTTTCTGCTAACAGAATAAGCTGACAGTTTGAACAACTTTTGCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR GCA 90 bp | TTACAAAAAGTCTATCTTCTTGTTACAAAGAGGATGAGCAGAAGCATAGAGCATTCCAGCTCACCAGACTaGTTTGCAATCCTCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQKVYLLVTKRMSRSIEHSSSPD*FAILSR Trigger: CCTTGAGAGGATTGCAAAGCAGTCTGGTGAGCTGGA...ATGCTCTATGCTTCTGCTCATCCTCTTTGTAACAAGAAGATAGACTTTTTGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CCA 90 bp | CACAGCAAAAGTTGTTCAAACTGTCAGCTTATTCTGTTAGCAGAAAACATTACATCTGGCTCCAGAAAATaGCAGAGTAGGCACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSKSCSNCQLILLAENITSGSRK*QSRHFC Trigger: GCAGAAGTGCCTACTCTGCCATTTTCTGGAGCCAGA...TGTAATGTTTTCTGCTAACAGAATAAGCTGACAGTTTGAACAACTTTTGCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CCA 90 bp | TTACAAAAAGTCTATCTTCTTGTTACAAAGAGGATGAGCAGAAGCATAGAGCATGGGGTTGATGCAAGCTaGTTCCAGGATGACAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQKVYLLVTKRMSRSIEHGVDAS*FQDDKL Trigger: AAGCTTGTCATCCTGGAACCAGCTTGCATCAACCCC...ATGCTCTATGCTTCTGCTCATCCTCTTTGTAACAAGAAGATAGACTTTTTGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CCA 90 bp | TTACAAAAAGTCTATCTTCTTGTTACAAAGAGGATGAGCAGAAGCATAGAGCATCTGTCTGGGAAAGGGTaGCTCTTTCTCCTTCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQKVYLLVTKRMSRSIEHLSGKG*LFLLRL Trigger: AAGACGAAGGAGAAAGAGCCACCCTTTCCCAGACAG...ATGCTCTATGCTTCTGCTCATCCTCTTTGTAACAAGAAGATAGACTTTTTGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CCA 90 bp | CACAGCAAAAGTTGTTCAAACTGTCAGCTTATTCTGTTAGCAGAAAACATTACAGAGACCCCGAGGGTCTaGTTACTCATCAGACTACTT | + |
|
Preference number: 4 (lower is better) Translates to: HSKSCSNCQLILLAENITETPRV*LLIRLL Trigger: AAGTAGTCTGATGAGTAACCAGACCCTCGGGGTCTC...TGTAATGTTTTCTGCTAACAGAATAAGCTGACAGTTTGAACAACTTTTGCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR GCA 90 bp | TTACAAAAAGTCTATCTTCTTGTTACAAAGAGGATGAGCAGAAGCATAGAGCATAGGCTTAGACCTATCTaGTACTGGTTCTTTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQKVYLLVTKRMSRSIEHRLRPI*YWFFAG Trigger: GCCAGCAAAGAACCAGTAGCAGATAGGTCTAAGCCT...ATGCTCTATGCTTCTGCTCATCCTCTTTGTAACAAGAAGATAGACTTTTTGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR GCA 90 bp | TTGATACTTTGTGGAATTTGTGGTAGCCAACATACAAACACTTTGCTTGGAAAGAGGATGACAAGCTTGTaGCACCCTGTTTCTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: LILCGICGSQHTNTLLGKRMTSL*HPVSGI Trigger: TATTCCAGAAACAGGGTGGCACAAGCTTGTCATCCT...CTTTCCAAGCAAAGTGTTTGTATGTTGGCTACCACAAATTCCACAAAGTATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CCA 90 bp | TTGATACTTTGTGGAATTTGTGGTAGCCAACATACAAACACTTTGCTTGGAAAGCTGTCTTCCTCCATTTaGCTGCCCATAGAGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LILCGICGSQHTNTLLGKLSSSI*LPIECK Trigger: TTTACACTCTATGGGCAGCCAAATGGAGGAAGACAG...CTTTCCAAGCAAAGTGTTTGTATGTTGGCTACCACAAATTCCACAAAGTATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR CAA 72 bp | TACAAACACTTTGCTTGGAAAGCTGTAACTGATGCTTaGAACATATGGACCTATGATAGGTCCATAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: YKHFAWKAVTDA*NIWTYDRSIEF Trigger: GAATTCTATGGACCTATCATAGGTCCATATGTTCAAAGCATCAGTTACAGCTTTCCAAGCAAAGTGTTTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| 3UTR CAA 72 bp | AATGGTGCCAAGCACTTTAATTTTACACAGCAAAAGTaGTTCAAACTGTCAGCTTATTCTGTTAGCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NGAKHFNFTQQK*FKLSAYSVSRK Trigger: TTTTCTGCTAACAGAATAAGCTGACAGTTTGAACAACTTTTGCTGTGTAAAATTAAAGTGCTTGGCACCATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS TCA 90 bp | AGACTGCTGCCCACCGAGGAGGCAGAGATGCTTCTGCTAGAAAGCTaGGGAGCACCTGGGCTCACCGTGGACTTCCACTGTGGCGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLLPTEEAEMLLLES*GAPGLTVDFHCGGR Trigger: TCTCCCGCCACAGTGGAAGTCCACGGTGAGCCCAGGTGCTCCTCAGCTTTCTAGCAGAAGCATCTCTGCCTCCTCGGTGGGCAGCAGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS TCA 90 bp | GGTGGGCAGAGCAAGGTACTCCTCATCACTTCCCACCTCCTCTTCTaGTGGCCATCCAGGCGTCACACAGGCCGGGCAGCTAACATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGQSKVLLITSHLLF*WPSRRHTGRAANML Trigger: CAGCATGTTAGCTGCCCGGCCTGTGTGACGCCTGGATGGCCATCAGAAGAGGAGGTGGGAAGTGATGAGGAGTACCTTGCTCTGCCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS GCA 90 bp | CAACTCGGGAGAGGAGACATTGGCAAAAGAGGCCCTCTGAGGTCCTaGCTTCTCTTGGTGATCCTGAAGACTGCTGCCCACCGAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QLGRGDIGKRGPLRS*LLLVILKTAAHRGG Trigger: GCCTCCTCGGTGGGCAGCAGTCTTCAGGATCACCAAGAGAAGGCAGGACCTCAGAGGGCCTCTTTTGCCAATGTCTCCTCTCCCGAGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS GCA 90 bp | TCTGATGGCCATCCAGGCGTCACACAGGCCGGGCAGCTAACATGCTaGCTGCCTCTCTTCTGTCTGGGAAAGGGTGGCTCTTTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SDGHPGVTQAGQLTC*LPLFCLGKGGSFSF Trigger: GAAGGAGAAAGAGCCACCCTTTCCCAGACAGAAGAGAGGCAGGCAGCATGTTAGCTGCCCGGCCTGTGTGACGCCTGGATGGCCATCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS GCA 90 bp | TCTTCTGATGGCCATCCAGGCGTCACACAGGCCGGGCAGCTAACATaGTGCCTGCCTCTCTTCTGTCTGGGAAAGGGTGGCTCTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSDGHPGVTQAGQLT*CLPLFCLGKGGSFS Trigger: GGAGAAAGAGCCACCCTTTCCCAGACAGAAGAGAGGCAGGCAGCATGTTAGCTGCCCGGCCTGTGTGACGCCTGGATGGCCATCAGAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CCA 90 bp | GTCCCAGAGTGCGGAGTGGCGGTTAGGGGAAGGAGGCAGAGAATTTaGCAGCGCACAGGCCCAGTATTCTGCCTGAAAGGAGAGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VPECGVAVRGRRQRI*QRTGPVFCLKGEVS Trigger: AGACACCTCTCCTTTCAGGCAGAATACTGGGCCTGTGCGCTGCCAAATTCTCTGCCTCCTTCCCCTAACCGCCACTCCGCACTCTGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CCA 90 bp | CGGGCAGCTAACATGCTGCCTGCCTCTCTTCTGTCTGGGAAAGGGTaGCTCTTTCTCCTTCGTCTTCAGCTGGGGAGAGCCCATTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RAANMLPASLLSGKG*LFLLRLQLGRAHSE Trigger: CTCCGAATGGGCTCTCCCCAGCTGAAGACGAAGGAGAAAGAGCCACCCTTTCCCAGACAGAAGAGAGGCAGGCAGCATGTTAGCTGCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CCA 90 bp | CAGAGTGGGCTGCCTGGGGTACAGTCAACTCGGGAGAGGAGACATTaGCAAAAGAGGCCCTCTGAGGTCCTGCCTTCTCTTGGTGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: QSGLPGVQSTRERRH*QKRPSEVLPSLGDP Trigger: AGGATCACCAAGAGAAGGCAGGACCTCAGAGGGCCTCTTTTGCCAATGTCTCCTCTCCCGAGTTGACTGTACCCCAGGCAGCCCACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CCA 90 bp | CTCTTCTGTCTGGGAAAGGGTGGCTCTTTCTCCTTCGTCTTCAGCTaGGGAGAGCCCATTCGGAGGTCCTCACCTATAGGGAGGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFCLGKGGSFSFVFS*GEPIRRSSPIGRQS Trigger: GGACTGCCTCCCTATAGGTGAGGACCTCCGAATGGGCTCTCCCCAGCTGAAGACGAAGGAGAAAGAGCCACCCTTTCCCAGACAGAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CCA 90 bp | GCTGGAAGTAGGTCCTGGGAGGCAGGAAGCCTGTCTTCCTCCATTTaGCTGCCCATAGAGTGTAAAACCTCTCCAGTGCCCACACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGSRSWEAGSLSSSI*LPIECKTSPVPTLA Trigger: TGCCAGTGTGGGCACTGGAGAGGTTTTACACTCTATGGGCAGCCAAATGGAGGAAGACAGGCTTCCTGCCTCCCAGGACCTACTTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS-3UTR CAA 90 bp | GGCTGTGCCTCAGCCAGATGTGATATCAGAACTAGGCTCAGAATGCAGAGCCCTGACTTTCAGGTTGCTTaGGGAGCTGAGGCCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GCASARCDIRTRLRMQSPDFQVA*GAEAQA Trigger: GGCCTGGGCCTCAGCTCCCAAAGCAACCTGAAAGTC...AGGGCTCTGCATTCTGAGCCTAGTTCTGATATCACATCTGGCTGAGGCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS CCA 90 bp | CCACAGGCCCTTGAAAGGAAGTTCCAGAAGGATGCTTCCTGTGGCTaGAGTCCAATGTGGGGGAGGCTGGCTTGTCACTGTCTGAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: PQALERKFQKDASCG*SPMWGRLACHCLRL Trigger: AAGTCTCAGACAGTGACAAGCCAGCCTCCCCCACATTGGACTCCAGCCACAGGAAGCATCCTTCTGGAACTTCCTTTCAAGGGCCTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CCA 90 bp | GCACACACTGCACTAGAGAAGCTTTCTCCTGCTCATCTGTCGTCCTaGGAAGTGTCTCTCCAGCTACTAGCTCGGAGAACAGCCGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AHTALEKLSPAHLSS*EVSLQLLARRTAAC Trigger: ACAGGCGGCTGTTCTCCGAGCTAGTAGCTGGAGAGACACTTCCCAGGACGACAGATGAGCAGGAGAAAGCTTCTCTAGTGCAGTGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS-3UTR CAA 90 bp | GGCTGTGCCTCAGCCAGATGTGATATCAGAACTAGGCTCAGAATGCAGAGCCCTCTGGCCCACAGGCCCTaGAAAGGAAGTTCCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCASARCDIRTRLRMQSPLAHRP*KGSSRR Trigger: CCTTCTGGAACTTCCTTTCAAGGGCCTGTGGGCCAG...AGGGCTCTGCATTCTGAGCCTAGTTCTGATATCACATCTGGCTGAGGCACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS CCA 90 bp | TCAAGCAGATCTTCATACTCTTTATTTGGGTCCCAGAGTGCGGAGTaGCGGTTAGGGGAAGGAGGCAGAGAATTTGGCAGCGCACAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRSSYSLFGSQSAE*RLGEGGREFGSAQA Trigger: GGCCTGTGCGCTGCCAAATTCTCTGCCTCCTTCCCCTAACCGCCACTCCGCACTCTGGGACCCAAATAAAGAGTATGAAGATCTGCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS-3UTR CAA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCGCTGCTGTTGGCCTGTaGTCAGGGATGAGGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CHRETCIMKSTLSVGHGSAAVGL*SGMRVQ Trigger: CTGCACCCTCATCCCTGACAACAGGCCAACAGCAGC...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CAA 90 bp | ACTAATGTGAGCTGGTGCATGACTTTAATCCCAACACTTGGGGAGGCACAGGATGACTTTCAGGTTGCTTaGGGAGCTGAGGCCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TNVSWCMTLIPTLGEAQDDFQVA*GAEAQA Trigger: GGCCTGGGCCTCAGCTCCCAAAGCAACCTGAAAGTC...ATCCTGTGCCTCCCCAAGTGTTGGGATTAAAGTCATGCACCAGCTCACATTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CAA 90 bp | CCTGTAAGGCTGGTCCTGGGTGGAGCACTGAGGTCAGCAACATCTGTGACATTATCCAGGATGACAAGCTaGTGCCACCCTGTTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PVRLVLGGALRSATSVTLSRMTS*CHPVSG Trigger: TCCAGAAACAGGGTGGCACAAGCTTGTCATCCTGGA...TAATGTCACAGATGTTGCTGACCTCAGTGCTCCACCCAGGACCAGCCTTACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS-3UTR CAA 90 bp | ATGGTCATTTGTCTCCACCTCTATCCCAAGACTCCAGGTTTTCCTCTGCCAGGATGCCGAGACATGCTGTaGGTGGGCTGGGGAAACATC | + |
|
Preference number: 5 (lower is better) Translates to: MVICLHLYPKTPGFPLPGCRDML*VGWGNI Trigger: GATGTTTCCCCAGCCCACCAACAGCATGTCTCGGCA...TCCTGGCAGAGGAAAACCTGGAGTCTTGGGATAGAGGTGGAGACAAATGACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS GCA 90 bp | AGTGTAGTCAAGCAGATCTTCATACTCTTTATTTGGGTCCCAGAGTaGGGAGTGGCGGTTAGGGGAAGGAGGCAGAGAATTTGGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SVVKQIFILFIWVPE*GVAVRGRRQRIWQR Trigger: GCGCTGCCAAATTCTCTGCCTCCTTCCCCTAACCGCCACTCCGCACTCTGGGACCCAAATAAAGAGTATGAAGATCTGCTTGACTACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS GCA 90 bp | CAGCAGATCAGCTCTTCCAGCCGACAGCAAAATGTCTGCACACACTaGACTAGAGAAGCTTTCTCCTGCTCATCTGTCGTCCTGGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: QQISSSSRQQNVCTH*TREAFSCSSVVLGS Trigger: ACTTCCCAGGACGACAGATGAGCAGGAGAAAGCTTCTCTAGTGCAGTGTGTGCAGACATTTTGCTGTCGGCTGGAAGAGCTGATCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 |
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| CDS CCA 90 bp | CCTCAGTGGGTAAGTGTAGTCAAGCAGATCTTCATACTCTTTATTTaGGTCCCAGAGTGCGGAGTGGCGGTTAGGGGAAGGAGGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PQWVSVVKQIFILFI*VPECGVAVRGRRQR Trigger: TCTCTGCCTCCTTCCCCTAACCGCCACTCCGCACTCTGGGACCCAAATAAAGAGTATGAAGATCTGCTTGACTACACTTACCCACTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CCA 90 bp | GAAAGGAAGTTCCAGAAGGATGCTTCCTGTGGCTGGAGTCCAATGTaGGGGAGGCTGGCTTGTCACTGTCTGAGACTTGTAGTGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: ERKFQKDASCGWSPM*GRLACHCLRLVVNC Trigger: ACAGTTCACTACAAGTCTCAGACAGTGACAAGCCAGCCTCCCCCACATTGGACTCCAGCCACAGGAAGCATCCTTCTGGAACTTCCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS-3UTR CAA 90 bp | GTTAGCACAAGCATGCAGTTCAGAAGCATGGCAGGCCAGCTCCTGAGCATTCTTTCTGCTACTGGTTCTTaGCTGGCAGTATGGACCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VSTSMQFRSMAGQLLSILSATGS*LAVWTR Trigger: ACGGGTCCATACTGCCAGCAAAGAACCAGTAGCAGA...AAGAATGCTCAGGAGCTGGCCTGCCATGCTTCTGAACTGCATGCTTGTGCTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CAA 90 bp | AGGCTGGTCCTGGGTGGAGCACTGAGGTCAGCAACATCTGTGACATTATACAACTCTGCTACTGGTTCTTaGCTGGCAGTATGGACCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RLVLGGALRSATSVTLYNSATGS*LAVWTR Trigger: ACGGGTCCATACTGCCAGCAAAGAACCAGTAGCAGA...GTTGTATAATGTCACAGATGTTGCTGACCTCAGTGCTCCACCCAGGACCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS-3UTR CAA 90 bp | GGCTGTGCCTCAGCCAGATGTGATATCAGAACTAGGCTCAGAATGCAGAGCCCTGAGTTTTCAGTGGTTTaGAAGAGACCCCGAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GCASARCDIRTRLRMQSPEFSVV*KRPRGS Trigger: AGACCCTCGGGGTCTCTTCAAAACCACTGAAAACTC...AGGGCTCTGCATTCTGAGCCTAGTTCTGATATCACATCTGGCTGAGGCACAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS-3UTR CAA 90 bp | GGCTGTGCCTCAGCCAGATGTGATATCAGAACTAGGCTCAGAATGCAGAGCCCTGTGACTTTAGAGTACTaGCTGGGGAGACAGACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GCASARCDIRTRLRMQSPVTLEY*LGRQTN Trigger: GTTTGTCTGTCTCCCCAGCAAGTACTCTAAAGTCAC...AGGGCTCTGCATTCTGAGCCTAGTTCTGATATCACATCTGGCTGAGGCACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS-3UTR CAA 90 bp | TGCCATAGAGAAACGTGCATAATGAAAAGCACTCTCTCAGTTGGCCACGGCTCCTCCAGGATGACAAGCTaGTGCCACCCTGTTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CHRETCIMKSTLSVGHGSSRMTS*CHPVSG Trigger: TCCAGAAACAGGGTGGCACAAGCTTGTCATCCTGGA...GGAGCCGTGGCCAACTGAGAGAGTGCTTTTCATTATGCACGTTTCTCTATGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS GCA 90 bp | GTGAACATTTTTACCTGCACACACTGCACTAGAGAAGCTTTCTCCTaGTCATCTGTCGTCCTGGGAAGTGTCTCTCCAGCTACTAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VNIFTCTHCTREAFS*SSVVLGSVSPATSS Trigger: CGAGCTAGTAGCTGGAGAGACACTTCCCAGGACGACAGATGAGCAGGAGAAAGCTTCTCTAGTGCAGTGTGTGCAGGTAAAAATGTTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS-3UTR CAA 90 bp | GTTAGCACAAGCATGCAGTTCAGAAGCATGGCAGGCCAGCTCCTGAGCATTCTTTCTGCTGATGAGCAATaGTGGGAGACATTAGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSTSMQFRSMAGQLLSILSADEQ*WETLVG Trigger: ACCCACTAATGTCTCCCACAATTGCTCATCAGCAGA...AAGAATGCTCAGGAGCTGGCCTGCCATGCTTCTGAACTGCATGCTTGTGCTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS TCA 90 bp | CTCTCAAGGACATCCTTTAAAACTGGGGTGTTATCCAACAGGCACTaGAGAAGAATCTCTCCCTTCTCCAAGACGCTCTCTGTCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSRTSFKTGVLSNRH*RRISPFSKTLSVRD Trigger: GTCCCTGACAGAGAGCGTCTTGGAGAAGGGAGAGATTCTTCTTCAGTGCCTGTTGGATAACACCCCAGTTTTAAAGGATGTCCTTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CAA 90 bp | AGTGATGAAGTCTGCCTACTTCAGGCATGTTCAGGGCTCAGTACAACAAGAGAAAGGTCCTGCCTTCTCTaGGTGATCCTGAAGACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SDEVCLLQACSGLSTTRERSCLL*VILKTA Trigger: AGCAGTCTTCAGGATCACCAAGAGAAGGCAGGACCT...TTCTCTTGTTGTACTGAGCCCTGAACATGCCTGAAGTAGGCAGACTTCATCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS GCA 90 bp | ACTCCTTCCAGAAGATTCTCCGTGAACATTTTTACCTGCACACACTaGACTAGAGAAGCTTTCTCCTGCTCATCTGTCGTCCTGGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TPSRRFSVNIFTCTH*TREAFSCSSVVLGS Trigger: ACTTCCCAGGACGACAGATGAGCAGGAGAAAGCTTCTCTAGTGCAGTGTGTGCAGGTAAAAATGTTCACGGAGAATCTTCTGGAAGGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS GCA 90 bp | GGAAACATCACTCCTTCCAGAAGATTCTCCGTGAACATTTTTACCTaGACACACTGCACTAGAGAAGCTTTCTCCTGCTCATCTGTCGTC | + |
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Preference number: 5 (lower is better) Translates to: GNITPSRRFSVNIFT*THCTREAFSCSSVV Trigger: GACGACAGATGAGCAGGAGAAAGCTTCTCTAGTGCAGTGTGTGCAGGTAAAAATGTTCACGGAGAATCTTCTGGAAGGAGTGATGTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS-3UTR CAA 90 bp | TTCTCCCGACTTACTAAGGGTGAGCATTTCACTCTACAGTTTTGGCCACTAACAGCTCACCAGACTGCTTaGCAATCCTCTCAAGGACAT | + |
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Preference number: 5 (lower is better) Translates to: FSRLTKGEHFTLQFWPLTAHQTA*QSSQGH Trigger: ATGTCCTTGAGAGGATTGCAAAGCAGTCTGGTGAGC...TGTTAGTGGCCAAAACTGTAGAGTGAAATGCTCACCCTTAGTAAGTCGGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CAA 90 bp | ACAACAAGAGAAGTCTACATGGCACATCTGACTGAGCTGCTATTTAACTTGTCCTCTGCTGATGAGCAATaGTGGGAGACATTAGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: TTREVYMAHLTELLFNLSSADEQ*WETLVG Trigger: ACCCACTAATGTCTCCCACAATTGCTCATCAGCAGA...GGACAAGTTAAATAGCAGCTCAGTCAGATGTGCCATGTAGACTTCTCTTGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS-3UTR CAA 90 bp | CACAGCAAAAGTTGTTCAAACTGTCAGCTTATTCTGTTAGCAGAAAACATTACACTGGCCCACAGGCCCTaGAAAGGAAGTTCCAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: HSKSCSNCQLILLAENITLAHRP*KGSSRR Trigger: CCTTCTGGAACTTCCTTTCAAGGGCCTGTGGGCCAG...TGTAATGTTTTCTGCTAACAGAATAAGCTGACAGTTTGAACAACTTTTGCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CAA 90 bp | TTGATACTTTGTGGAATTTGTGGTAGCCAACATACAAACACTTTGCTTGGAAAGAGGTCCTGCCTTCTCTaGGTGATCCTGAAGACTGCT | + |
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Preference number: 5 (lower is better) Translates to: LILCGICGSQHTNTLLGKRSCLL*VILKTA Trigger: AGCAGTCTTCAGGATCACCAAGAGAAGGCAGGACCT...CTTTCCAAGCAAAGTGTTTGTATGTTGGCTACCACAAATTCCACAAAGTATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CAA 90 bp | TTGATACTTTGTGGAATTTGTGGTAGCCAACATACAAACACTTTGCTTGGAAAGGAGTTTTCAGTGGTTTaGAAGAGACCCCGAGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: LILCGICGSQHTNTLLGKEFSVV*KRPRGS Trigger: AGACCCTCGGGGTCTCTTCAAAACCACTGAAAACTC...CTTTCCAAGCAAAGTGTTTGTATGTTGGCTACCACAAATTCCACAAAGTATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CAA 90 bp | TTACAAAAAGTCTATCTTCTTGTTACAAAGAGGATGAGCAGAAGCATAGAGCATAGCTGCAGAGAAGACTaGAGACCTGTAAGGCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: LQKVYLLVTKRMSRSIEHSCRED*RPVRLV Trigger: GACCAGCCTTACAGGTCTCAAGTCTTCTCTGCAGCT...ATGCTCTATGCTTCTGCTCATCCTCTTTGTAACAAGAAGATAGACTTTTTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CAA 90 bp | CACAGCAAAAGTTGTTCAAACTGTCAGCTTATTCTGTTAGCAGAAAACATTACACTTCATACTCTTTATTaGGGTCCCAGAGTGCGGAGT | + |
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Preference number: 5 (lower is better) Translates to: HSKSCSNCQLILLAENITLHTLY*GPRVRS Trigger: ACTCCGCACTCTGGGACCCAAATAAAGAGTATGAAG...TGTAATGTTTTCTGCTAACAGAATAAGCTGACAGTTTGAACAACTTTTGCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CAA 90 bp | TTACAAAAAGTCTATCTTCTTGTTACAAAGAGGATGAGCAGAAGCATAGAGCATGTGACTTTAGAGTACTaGCTGGGGAGACAGACAAAC | + |
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Preference number: 5 (lower is better) Translates to: LQKVYLLVTKRMSRSIEHVTLEY*LGRQTN Trigger: GTTTGTCTGTCTCCCCAGCAAGTACTCTAAAGTCAC...ATGCTCTATGCTTCTGCTCATCCTCTTTGTAACAAGAAGATAGACTTTTTGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS-3UTR CAA 90 bp | TTGATACTTTGTGGAATTTGTGGTAGCCAACATACAAACACTTTGCTTGGAAAGTACATCTTTCTTAAATaGCCTGTAAAGCTGCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: LILCGICGSQHTNTLLGKYIFLK*PVKLQR Trigger: TCTCTGCAGCTTTACAGGCAATTTAAGAAAGATGTA...CTTTCCAAGCAAAGTGTTTGTATGTTGGCTACCACAAATTCCACAAAGTATCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS CCA 72 bp | AGCGGAGGCCCTGCCCCCACCACAGAGTGGGCTGCCTaGGGTACAGTCAACTCGGGAGAGGAGACATTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SGGPAPTTEWAA*GTVNSGEETLA Trigger: TGCCAATGTCTCCTCTCCCGAGTTGACTGTACCCCAGGCAGCCCACTCTGTGGTGGGGGCAGGGCCTCCGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS GCA 72 bp | GGCCATCCAGGCGTCACACAGGCCGGGCAGCTAACATaGTGCCTGCCTCTCTTCTGTCTGGGAAAGGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GHPGVTQAGQLT*CLPLFCLGKGG Trigger: GCCACCCTTTCCCAGACAGAAGAGAGGCAGGCAGCATGTTAGCTGCCCGGCCTGTGTGACGCCTGGATGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS GCA 72 bp | CATCCAGGCGTCACACAGGCCGGGCAGCTAACATGCTaGCTGCCTCTCTTCTGTCTGGGAAAGGGTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: HPGVTQAGQLTC*LPLFCLGKGGS Trigger: AGAGCCACCCTTTCCCAGACAGAAGAGAGGCAGGCAGCATGTTAGCTGCCCGGCCTGTGTGACGCCTGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CCA 72 bp | GGCAGAGATGCTTCTGCTAGAAAGCTGAGGAGCACCTaGGCTCACCGTGGACTTCCACTGTGGCGGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GRDASARKLRST*AHRGLPLWRER Trigger: CCTCTCCCGCCACAGTGGAAGTCCACGGTGAGCCCAGGTGCTCCTCAGCTTTCTAGCAGAAGCATCTCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS GCA 72 bp | TGGCAGTATGGACCCGTGACAAGAAAACTCCCGAGATaGAGCCAGGGTCAGCTTCAGCCCTCCACAGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: WQYGPVTRKLPR*SQGQLQPSTVA Trigger: GGCCACTGTGGAGGGCTGAAGCTGACCCTGGCTGCATCTCGGGAGTTTTCTTGTCACGGGTCCATACTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CCA 72 bp | GGGCAGCAGCTTCCCAGAGTTCCACCTGCCACAGGATaGGACCTTTGTGTTGACAGACACTTCTGCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: GQQLPRVPPATG*DLCVDRHFCLS Trigger: GCTGAGGCAGAAGTGTCTGTCAACACAAAGGTCCCATCCTGTGGCAGGTGGAACTCTGGGAAGCTGCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CCA 72 bp | TGCGGAGTGGCGGTTAGGGGAAGGAGGCAGAGAATTTaGCAGCGCACAGGCCCAGTATTCTGCCTGAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: CGVAVRGRRQRI*QRTGPVFCLKG Trigger: TCCTTTCAGGCAGAATACTGGGCCTGTGCGCTGCCAAATTCTCTGCCTCCTTCCCCTAACCGCCACTCCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CAA 90 bp | AGAGGAGACATTGGCAAAAGAGGCCCTCTGAGGTCCTGCCTTCTCTaGGTGATCCTGAAGACTGCTGCCCACCGAGGAGGCAGAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: RGDIGKRGPLRSCLL*VILKTAAHRGGRDA Trigger: AGCATCTCTGCCTCCTCGGTGGGCAGCAGTCTTCAGGATCACCAAGAGAAGGCAGGACCTCAGAGGGCCTCTTTTGCCAATGTCTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS TCA 72 bp | CCTGAGGTGTGTGGTTGCTGGCTGAGGCCCAACACCTaGGATGGATCAAGCGTAGCCTGGAAGTCTTCACTG | + |
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Preference number: 6 (lower is better) Translates to: PEVCGCWLRPNT*DGSSVAWKSSL Trigger: CAGTGAAGACTTCCAGGCTACGCTTGATCCATCTCAGGTGTTGGGCCTCAGCCAGCAACCACACACCTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS TCA 72 bp | GAATGCCTGAAGCAGGGGTTCTGGCCCACAGGCCCTTaGAAGGAAGTTCCAGAAGGATGCTTCCTGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ECLKQGFWPTGP*KEVPEGCFLWL Trigger: CAGCCACAGGAAGCATCCTTCTGGAACTTCCTTTCAAGGGCCTGTGGGCCAGAACCCCTGCTTCAGGCATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS TCA 72 bp | GTGGGTGTTCTGCTGCTGTTGGCCTGTTGTCAGGGATaGGGGTGCAGCCAGCCAACATGTCCAAAGAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: VGVLLLLACCQG*GCSQPTCPKRL Trigger: TAGCCTCTTTGGACATGTTGGCTGGCTGCACCCTCATCCCTGACAACAGGCCAACAGCAGCAGAACACCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS CCA 72 bp | GGTGTGTGGTTGCTGGCTGAGGCCCAACACCTGAGATaGATCAAGCGTAGCCTGGAAGTCTTCACTGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: GVWLLAEAQHLR*IKRSLEVFTVS Trigger: GCTGACAGTGAAGACTTCCAGGCTACGCTTGATCCATCTCAGGTGTTGGGCCTCAGCCAGCAACCACACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS GCA 72 bp | AGGCAGAGAATTTGGCAGCGCACAGGCCCAGTATTCTaGCTGAAAGGAGAGGTGTCTCTTACCCAGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RQRIWQRTGPVF*LKGEVSLTQAC Trigger: ACAGGCCTGGGTAAGAGACACCTCTCCTTTCAGGCAGAATACTGGGCCTGTGCGCTGCCAAATTCTCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CAA 72 bp | AGAATGCCTGAAGCAGGGGTTCTGGCCCACAGGCCCTaGAAAGGAAGTTCCAGAAGGATGCTTCCTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RMPEAGVLAHRP*KGSSRRMLPVA Trigger: AGCCACAGGAAGCATCCTTCTGGAACTTCCTTTCAAGGGCCTGTGGGCCAGAACCCCTGCTTCAGGCATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS TCA 72 bp | ATCTGCTACTGGTTCTTTGCTGGCAGTATGGACCCGTaGCAAGAAAACTCCCGAGATGCAGCCAGGGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: ICYWFFAGSMDP*QENSRDAARVS Trigger: GCTGACCCTGGCTGCATCTCGGGAGTTTTCTTGTCACGGGTCCATACTGCCAGCAAAGAACCAGTAGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CCA 72 bp | CTTGAAAGGAAGTTCCAGAAGGATGCTTCCTGTGGCTaGAGTCCAATGTGGGGGAGGCTGGCTTGTCACTGT | + |
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Preference number: 6 (lower is better) Translates to: LERKFQKDASCG*SPMWGRLACHC Trigger: ACAGTGACAAGCCAGCCTCCCCCACATTGGACTCCAGCCACAGGAAGCATCCTTCTGGAACTTCCTTTCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CAA 72 bp | CCAGAGTTCCACCTGCCACAGGATGGGACCTTTGTGTaGACAGACACTTCTGCCTCAGCCTCATCTTCACTC | + |
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Preference number: 6 (lower is better) Translates to: PEFHLPQDGTFV*TDTSASASSSL Trigger: GAGTGAAGATGAGGCTGAGGCAGAAGTGTCTGTCAACACAAAGGTCCCATCCTGTGGCAGGTGGAACTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CAA 72 bp | GAGACCCCGAGGGTCTGGTTACTCATCAGACTACTTTaGCCTCTAGAGTCCTGGGGCTGGATAGAATGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ETPRVWLLIRLL*PLESWGWIECL Trigger: CAGGCATTCTATCCAGCCCCAGGACTCTAGAGGCAAAAGTAGTCTGATGAGTAACCAGACCCTCGGGGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CAA 72 bp | CTAGCTCGGAGAACAGCCGCCTGTCCGTCATGGCTTTaGAGGCGGGCTGAGTTTTCAGTGGTTTTGAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: LARRTAACPSWL*RRAEFSVVLKR Trigger: TCTCTTCAAAACCACTGAAAACTCAGCCCGCCTCAAAAGCCATGACGGACAGGCGGCTGTTCTCCGAGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS TCA 72 bp | CAGAGTTCCACCTGCCACAGGATGGGACCTTTGTGTTaGCAGACACTTCTGCCTCAGCCTCATCTTCACTCA | + |
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Preference number: 6 (lower is better) Translates to: QSSTCHRMGPLC*QTLLPQPHLHS Trigger: TGAGTGAAGATGAGGCTGAGGCAGAAGTGTCTGTCAACACAAAGGTCCCATCCTGTGGCAGGTGGAACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CCA 72 bp | TCTTCATACTCTTTATTTGGGTCCCAGAGTGCGGAGTaGCGGTTAGGGGAAGGAGGCAGAGAATTTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSYSLFGSQSAE*RLGEGGREFGS Trigger: GCTGCCAAATTCTCTGCCTCCTTCCCCTAACCGCCACTCCGCACTCTGGGACCCAAATAAAGAGTATGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CCA 72 bp | GCACTAGAGAAGCTTTCTCCTGCTCATCTGTCGTCCTaGGAAGTGTCTCTCCAGCTACTAGCTCGGAGAACA | + |
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Preference number: 6 (lower is better) Translates to: ALEKLSPAHLSS*EVSLQLLARRT Trigger: TGTTCTCCGAGCTAGTAGCTGGAGAGACACTTCCCAGGACGACAGATGAGCAGGAGAAAGCTTCTCTAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS GCA 72 bp | AATGTCTGCACACACTGCACTAGAGAAGCTTTCTCCTaGTCATCTGTCGTCCTGGGAAGTGTCTCTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: NVCTHCTREAFS*SSVVLGSVSPA Trigger: AGCTGGAGAGACACTTCCCAGGACGACAGATGAGCAGGAGAAAGCTTCTCTAGTGCAGTGTGTGCAGACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 |
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| CDS GCA 72 bp | AGCTCTTCCAGCCGACAGCAAAATGTCTGCACACACTaGACTAGAGAAGCTTTCTCCTGCTCATCTGTCGTC | + |
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Preference number: 6 (lower is better) Translates to: SSSSRQQNVCTH*TREAFSCSSVV Trigger: GACGACAGATGAGCAGGAGAAAGCTTCTCTAGTGCAGTGTGTGCAGACATTTTGCTGTCGGCTGGAAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 |
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| CDS GCA 72 bp | TTTACCTGCACACACTGCACTAGAGAAGCTTTCTCCTaGTCATCTGTCGTCCTGGGAAGTGTCTCTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FTCTHCTREAFS*SSVVLGSVSPA Trigger: AGCTGGAGAGACACTTCCCAGGACGACAGATGAGCAGGAGAAAGCTTCTCTAGTGCAGTGTGTGCAGGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS CAA 90 bp | CTGGCTCCAGAAAATGGCAGAGTAGGCACTTCTGCTGATGAGCAATaGTGGGAGACATTAGTGGGTGACTTTAGAGTACTTGCTGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LAPENGRVGTSADEQ*WETLVGDFRVLAGE Trigger: CTCCCCAGCAAGTACTCTAAAGTCACCCACTAATGTCTCCCACAATTGCTCATCAGCAGAAGTGCCTACTCTGCCATTTTCTGGAGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS TCA 72 bp | CGTAGCCTGGAAGTCTTCACTGTCAGCCTCCTGTCCTaGGCAAACAGTTATAGTTCCAAAGACTTGAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSLEVFTVSLLS*ANSYSSKDLKS Trigger: GCTCTTCAAGTCTTTGGAACTATAACTGTTTGCTCAGGACAGGAGGCTGACAGTGAAGACTTCCAGGCTACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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| CDS CAA 90 bp | AGTCATAAAGATGATCTGCACGGCTCTCCAGCTCACCAGACTGCTTaGCAATCCTCTCAAGGACATCCTTTAAAACTGGGGTGTTATCCA | + |
|
Preference number: 6 (lower is better) Translates to: SHKDDLHGSPAHQTA*QSSQGHPLKLGCYP Trigger: TGGATAACACCCCAGTTTTAAAGGATGTCCTTGAGAGGATTGCAAAGCAGTCTGGTGAGCTGGAGAGCCGTGCAGATCATCTTTATGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS TCA 72 bp | ACATCCTTTAAAACTGGGGTGTTATCCAACAGGCACTaGAGAAGAATCTCTCCCTTCTCCAAGACGCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSFKTGVLSNRH*RRISPFSKTLS Trigger: AGAGAGCGTCTTGGAGAAGGGAGAGATTCTTCTTCAGTGCCTGTTGGATAACACCCCAGTTTTAAAGGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050611.14 |
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| CDS GCA 72 bp | AGAAGATTCTCCGTGAACATTTTTACCTGCACACACTaGACTAGAGAAGCTTTCTCCTGCTCATCTGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: RRFSVNIFTCTH*TREAFSCSSVV Trigger: GACGACAGATGAGCAGGAGAAAGCTTCTCTAGTGCAGTGTGTGCAGGTAAAAATGTTCACGGAGAATCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162811.2 |
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| CDS CAA 72 bp | GAAAATGGCAGAGTAGGCACTTCTGCTGATGAGCAATaGTGGGAGACATTAGTGGGTGACTTTAGAGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: ENGRVGTSADEQ*WETLVGDFRVL Trigger: AAGTACTCTAAAGTCACCCACTAATGTCTCCCACAATTGCTCATCAGCAGAAGTGCCTACTCTGCCATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050611.14 ENSMUST00000109596.8 ENSMUST00000162811.2 |
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