Pregenerated sensors for CEP57L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019813Ensembl transcript IDs: ENSMUST00000019951.16, ENSMUST00000105505.10, ENSMUST00000185394.2, ENSMUST00000186239.7, ENSMUST00000187143.7, ENSMUST00000189770.7, ENSMUST00000190022.7, ENSMUST00000191498.2
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGGGTTCCTTAAGAGCATATGAAATAAAAACCACGGAGACGGCGTaGGGTCTCACTGGTGAGGTTCATTTAGATGACAGACAGTTTGCC | + |
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Preference number: 1 (lower is better) Translates to: KGSLRAYEIKTTETA*GLTGEVHLDDRQFA Trigger: GGCAAACTGTCTGTCATCTAAATGAACCTCACCAGTGAGACCGCACGCCGTCTCCGTGGTTTTTATTTCATATGCTCTTAAGGAACCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR GCA 90 bp | AGTGGCTGTCATAGCAGAGCTGAGTTAAGGTCATTTTCACAAAACTaGACAATTACTGTGCCCTCCCTTTCCAAACAGAGCAAGCATGAG | + |
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Preference number: 1 (lower is better) Translates to: SGCHSRAELRSFSQN*TITVPSLSKQSKHE Trigger: CTCATGCTTGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAATGACCTTAACTCAGCTCTGCTATGACAGCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR CCA 90 bp | ACTCCCTTGATTTCAGTGAGCATCCATCCATTCAGTACAGCTTCTTaGATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: TPLISVSIHPFSTAS*IYLMGAAKQMLLKS Trigger: GCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGATGCTCACTGAAATCAAGGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR GCA 90 bp | AGGAAGGAAGACGAATTAGAACTGTCTTCAAAGGTTAATCAGTTATaGATCTCATTTAGTGGCTGTCATAGCAGAGCTGAGTTAAGGTCA | + |
|
Preference number: 1 (lower is better) Translates to: RKEDELELSSKVNQL*ISFSGCHSRAELRS Trigger: TGACCTTAACTCAGCTCTGCTATGACAGCCACTAAATGAGATGCATAACTGATTAACCTTTGAAGACAGTTCTAATTCGTCTTCCTTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR-3UTR CCA 90 bp | AACAGAGCAAGCATGAGCACCGCTGAGACAAGGGAAGGTGGCAGTTCCAGGGACGCAAAAATCAAACTGTaGAATAGTACCCACAGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: NRASMSTAETREGGSSRDAKIKL*NSTHRS Trigger: TGACCTGTGGGTACTATTCCACAGTTTGATTTTTGC...GTCCCTGGAACTGCCACCTTCCCTTGTCTCAGCGGTGCTCATGCTTGCTCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR-3UTR TCA 90 bp | ATGAGCACCGCTGAGACAAGGGAAGGTGGCAGTTCCAGGGACACCAAACAAACGTTCCTTAAGAGCATATaGAATAAAAACCACGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: MSTAETREGGSSRDTKQTFLKSI*NKNHGD Trigger: GTCTCCGTGGTTTTTATTTCATATGCTCTTAAGGAA...CGTTTGTTTGGTGTCCCTGGAACTGCCACCTTCCCTTGTCTCAGCGGTGCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGGACCAGAGCAGAGAATGCTGGAAAGGTAACTGGAAGGGTGCTGAAGCAAGACACTCAAGTGATTaGTGTGTATCTTTTAGTACA | + |
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Preference number: 2 (lower is better) Translates to: VGDQSRECWKGNWKGAEARHSSD*CVSFST Trigger: TGTACTAAAAGATACACAGCAATCACTTGAGTGTCT...TGCTTCAGCACCCTTCCAGTTACCTTTCCAGCATTCTCTGCTCTGGTCCCCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185394.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTTTCCCCACGGCCTGATTCCACAGGAACTCTTTTGTTCTCTCTCATCTCTTCATTACACACAGTGGTaGCTCTCTGTAAGACACTCA | + |
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Preference number: 2 (lower is better) Translates to: QFPHGLIPQELFCSLSSLHYTQW*LSVRHS Trigger: TGAGTGTCTTACAGAGAGCCACCACTGTGTGTAATG...AAGAGATGAGAGAGAACAAAAGAGTTCCTGTGGAATCAGGCCGTGGGGAAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185394.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAATGCTGGAAAGGTAACTGGAAGGGTGCTGAAGCAATAGCCTACGCTACACTCCATACTTCCAGTTaGAAGGCCATACAGATATGT | + |
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Preference number: 2 (lower is better) Translates to: RECWKGNWKGAEAIAYATLHTSS*KAIQIC Trigger: ACATATCTGTATGGCCTTCCAACTGGAAGTATGGAG...TGTAGCGTAGGCTATTGCTTCAGCACCCTTCCAGTTACCTTTCCAGCATTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185394.2 |
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| 3UTR CAA 90 bp | GACTCCCTTGATTTCAGTGAGCATCCATCCATTCAGTACAGCTTCTaGGATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: DSLDFSEHPSIQYSF*DLPYGSCKTDASKE Trigger: CTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGATGCTCACTGAAATCAAGGGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR CAA 90 bp | CTGCAAAAATCAAACTGTGGAATAGTACCCACAGGTCAGACTCCCTaGATTTCAGTGAGCATCCATCCATTCAGTACAGCTTCTTGGATT | + |
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Preference number: 2 (lower is better) Translates to: LQKSNCGIVPTGQTP*ISVSIHPFSTASWI Trigger: AATCCAAGAAGCTGTACTGAATGGATGGATGCTCACTGAAATCAAGGGAGTCTGACCTGTGGGTACTATTCCACAGTTTGATTTTTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAGACTCCCTTGATTTCAGTGAGCATCCATCCATTCAGTACAGCTTCTTGTTCCTTAAGAGCATATaGAATAAAAACCACGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: RSDSLDFSEHPSIQYSFLFLKSI*NKNHGD Trigger: GTCTCCGTGGTTTTTATTTCATATGCTCTTAAGGAA...CAAGAAGCTGTACTGAATGGATGGATGCTCACTGAAATCAAGGGAGTCTGACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR-3UTR CCA 90 bp | CATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCAAGCTTCAGTACAGCTTCTTaGATTTACCTTATGGGAGCT | + |
|
Preference number: 2 (lower is better) Translates to: HFHKTAQLLCPPFPNRASFSTAS*IYLMGA Trigger: AGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAA...GCTTGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR-3UTR CCA 90 bp | AGGTCATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCGCAAAAATCAAACTGTaGAATAGTACCCACAGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: RSFSQNCTITVPSLSKQSAKIKL*NSTHRS Trigger: TGACCTGTGGGTACTATTCCACAGTTTGATTTTTGC...GCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAATGACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR-3UTR GCA 90 bp | CATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCAAGCTTACCTTATGGGAGCTaGAAAACAGATGCTTCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: HFHKTAQLLCPPFPNRASLPYGS*KTDASK Trigger: TTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAA...GCTTGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR-3UTR CCA 90 bp | ATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCAAGCATTCAGTACAGCTTCTTaGATTTACCTTATGGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: IFTKLHNYCALPFQTEQAFSTAS*IYLMGA Trigger: AGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAA...TGCTTGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR-3UTR TCA 90 bp | ATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTCATTCCTTAAGAGCATATaGAATAAAAACCACGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: IYLMGAAKQMLLKSFMRSFLKSI*NKNHGD Trigger: GTCTCCGTGGTTTTTATTTCATATGCTCTTAAGGAA...TGACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR-3UTR TCA 90 bp | CAGATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGGTTAACAACAATGAATTCCTTAAGAGCATATaGAATAAAAACCACGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: QMLLKSFMRSRPLVNNNEFLKSI*NKNHGD Trigger: GTCTCCGTGGTTTTTATTTCATATGCTCTTAAGGAA...TTCATTGTTGTTAACCAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR-3UTR TCA 90 bp | ATGAGGTCAAGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGTTCCTTAAGAGCATATaGAATAAAAACCACGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: MRSRPLVNNNEKQSFRCQFLKSI*NKNHGD Trigger: GTCTCCGTGGTTTTTATTTCATATGCTCTTAAGGAA...CTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCTTGACCTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR TCA 72 bp | AATTACTGTGCCCTCCCTTTCCAAACAGAGCAAGCATaGGCACCGCTGAGACAAGGGAAGGTGGCAGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: NYCALPFQTEQA*APLRQGKVAVP Trigger: TGGAACTGCCACCTTCCCTTGTCTCAGCGGTGCTCATGCTTGCTCTGTTTGGAAAGGGAGGGCACAGTAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR CCA 72 bp | GTGGGGGACCAGAGCAGAGAATGCTGGAAAGGTAACTaGAAGGGTGCTGAAGCAATAGCCTACGCTACAGTT | + |
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Preference number: 3 (lower is better) Translates to: VGDQSRECWKGN*KGAEAIAYATV Trigger: AACTGTAGCGTAGGCTATTGCTTCAGCACCCTTCCAGTTACCTTTCCAGCATTCTCTGCTCTGGTCCCCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185394.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAGCACCGCTGAGACAAGGGAAGGTGGCAGTTCCAGGGACACCAAACAAACGATTCAGTACAGCTTCTaGGATTTACCTTATGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: MSTAETREGGSSRDTKQTIQYSF*DLPYGS Trigger: GCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAAT...CGTTTGTTTGGTGTCCCTGGAACTGCCACCTTCCCTTGTCTCAGCGGTGCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR GCA 72 bp | TTAAGAGCATATGAAATAAAAACCACGGAGACGGCGTaGGGTCTCACTGGTGAGGTTCATTTAGATGACAGA | + |
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Preference number: 3 (lower is better) Translates to: LRAYEIKTTETA*GLTGEVHLDDR Trigger: TCTGTCATCTAAATGAACCTCACCAGTGAGACCGCACGCCGTCTCCGTGGTTTTTATTTCATATGCTCTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR GCA 72 bp | CATAGCAGAGCTGAGTTAAGGTCATTTTCACAAAACTaGACAATTACTGTGCCCTCCCTTTCCAAACAGAGC | + |
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Preference number: 3 (lower is better) Translates to: HSRAELRSFSQN*TITVPSLSKQS Trigger: GCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAATGACCTTAACTCAGCTCTGCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR-3UTR CAA 90 bp | CTGATTCCACAGGAACTCTTTTGTTCTCTCTCATCTCTTGAGAACCTCTGTAGATCTCCATACTTCCAGTaGGAAGGCCATACAGATATG | + |
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Preference number: 3 (lower is better) Translates to: LIPQELFCSLSSLENLCRSPYFQ*EGHTDM Trigger: CATATCTGTATGGCCTTCCAACTGGAAGTATGGAGA...TCTACAGAGGTTCTCAAGAGATGAGAGAGAACAAAAGAGTTCCTGTGGAATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185394.2 |
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| 3UTR GCA 72 bp | ACACAGTGGTGGCTCTCTGTAAGACACTCAAGTGATTaGTGTGTATCTTTTAGTACACCATGTCTCCATACT | + |
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Preference number: 3 (lower is better) Translates to: TQWWLSVRHSSD*CVSFSTPCLHT Trigger: AGTATGGAGACATGGTGTACTAAAAGATACACAGCAATCACTTGAGTGTCTTACAGAGAGCCACCACTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185394.2 |
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| 3UTR-3UTR CAA 90 bp | ATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCAAGCAATTCAGTACAGCTTCTaGGATTTACCTTATGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: IFTKLHNYCALPFQTEQAIQYSF*DLPYGS Trigger: GCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAAT...TGCTTGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR GCA 72 bp | ATTCAGTACAGCTTCTTGGATTTACCTTATGGGAGCTaGAAAACAGATGCTTCTAAAGAGCTTCATGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: IQYSFLDLPYGS*KTDASKELHEV Trigger: GACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR CCA 72 bp | ATTTCAGTGAGCATCCATCCATTCAGTACAGCTTCTTaGATTTACCTTATGGGAGCTGCAAAACAGATGCTT | + |
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Preference number: 3 (lower is better) Translates to: ISVSIHPFSTAS*IYLMGAAKQML Trigger: AAGCATCTGTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGATGCTCACTGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR GCA 72 bp | GACGAATTAGAACTGTCTTCAAAGGTTAATCAGTTATaGATCTCATTTAGTGGCTGTCATAGCAGAGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: DELELSSKVNQL*ISFSGCHSRAE Trigger: CTCAGCTCTGCTATGACAGCCACTAAATGAGATGCATAACTGATTAACCTTTGAAGACAGTTCTAATTCGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR CCA 72 bp | GTTTTCCTGTGGTCTTATAGAATCCTATTACCTTTTTaGGTCCTAGACATCTATTACATTGTCATATATGGA | + |
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Preference number: 3 (lower is better) Translates to: VFLWSYRILLPF*VLDIYYIVIYG Trigger: TCCATATATGACAATGTAATAGATGTCTAGGACCCAAAAAGGTAATAGGATTCTATAAGACCACAGGAAAAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR TCA 90 bp | AACAGAGCAAGCATGAGCACCGCTGAGACAAGGGAAGGTGGCAGTTCCAGGGACCCAGGGTGGCAATTCTaGAATGCTTCATTTTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: NRASMSTAETREGGSSRDPGWQF*NASFCV Trigger: CACGCAAAATGAAGCATTTCAGAATTGCCACCCTGG...GTCCCTGGAACTGCCACCTTCCCTTGTCTCAGCGGTGCTCATGCTTGCTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR TCA 90 bp | AACAGAGCAAGCATGAGCACCGCTGAGACAAGGGAAGGTGGCAGTTCCAGGGACTTACGGACACTGTCTTaGTGCTTCTTGAGCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: NRASMSTAETREGGSSRDLRTLS*CFLSLE Trigger: CTCCAAGCTCAAGAAGCATCAAGACAGTGTCCGTAA...GTCCCTGGAACTGCCACCTTCCCTTGTCTCAGCGGTGCTCATGCTTGCTCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CCA 90 bp | ACGGCGTGCGGTCTCACTGGTGAGGTTCATTTAGATGACAGACAGTTTGCCTTGTCCTCAGAGACCGAGTaGTTCCCAGGCTGCATCATC | + |
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Preference number: 4 (lower is better) Translates to: TACGLTGEVHLDDRQFALSSETE*FPGCII Trigger: GATGATGCAGCCTGGGAACCACTCGGTCTCTGAGGA...CAAGGCAAACTGTCTGTCATCTAAATGAACCTCACCAGTGAGACCGCACGCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR TCA 90 bp | ATGAGCACCGCTGAGACAAGGGAAGGTGGCAGTTCCAGGGACACCAAACAAACGTTACGGACACTGTCTTaGTGCTTCTTGAGCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: MSTAETREGGSSRDTKQTLRTLS*CFLSLE Trigger: CTCCAAGCTCAAGAAGCATCAAGACAGTGTCCGTAA...CGTTTGTTTGGTGTCCCTGGAACTGCCACCTTCCCTTGTCTCAGCGGTGCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR TCA 90 bp | ATGAGCACCGCTGAGACAAGGGAAGGTGGCAGTTCCAGGGACACCAAACAAACGAAGCCTCTGTCTCTCTaGAAAGAGCTGGTTTCACTC | + |
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Preference number: 4 (lower is better) Translates to: MSTAETREGGSSRDTKQTKPLSL*KELVSL Trigger: GAGTGAAACCAGCTCTTTTCAGAGAGACAGAGGCTT...CGTTTGTTTGGTGTCCCTGGAACTGCCACCTTCCCTTGTCTCAGCGGTGCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR GCA 90 bp | AAAACCACGGAGACGGCGTGCGGTCTCACTGGTGAGGTTCATTTAGATGACAGATGTCTTGAAACAGCCTaGGCTGATGCTCCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KTTETACGLTGEVHLDDRCLETA*ADAPPP Trigger: AGGAGGAGGAGCATCAGCGCAGGCTGTTTCAAGACA...TCTGTCATCTAAATGAACCTCACCAGTGAGACCGCACGCCGTCTCCGTGGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CCA 90 bp | ACGGCGTGCGGTCTCACTGGTGAGGTTCATTTAGATGACAGACAGTTTGCCTTGGCTGTGGACCTGCACTaGTTGAAAGCCTCTGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TACGLTGEVHLDDRQFALAVDLH*LKASVS Trigger: AGAGACAGAGGCTTTCAACCAGTGCAGGTCCACAGC...CAAGGCAAACTGTCTGTCATCTAAATGAACCTCACCAGTGAGACCGCACGCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CCA 90 bp | AAAACCACGGAGACGGCGTGCGGTCTCACTGGTGAGGTTCATTTAGATGACAGAGCTGTGGACCTGCACTaGTTGAAAGCCTCTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTTETACGLTGEVHLDDRAVDLH*LKASVS Trigger: AGAGACAGAGGCTTTCAACCAGTGCAGGTCCACAGC...TCTGTCATCTAAATGAACCTCACCAGTGAGACCGCACGCCGTCTCCGTGGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGGGAAACGGGCTCTCCTaGGCTCTGAGGGTTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MGAAKQMLLKSFMRSRPLGNGLS*ALRVSS Trigger: AGAGCTAACCCTCAGAGCTCAGGAGAGCCCGTTTCC...CAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR GCA 90 bp | AACAGAGCAAGCATGAGCACCGCTGAGACAAGGGAAGGTGGCAGTTCCAGGGACAGATCTGGTCACCTTTaGTTTCCATCTTCTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NRASMSTAETREGGSSRDRSGHL*FPSSWL Trigger: TAGCCAAGAAGATGGAAAGCAAAGGTGACCAGATCT...GTCCCTGGAACTGCCACCTTCCCTTGTCTCAGCGGTGCTCATGCTTGCTCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CCA 90 bp | AACAGAGCAAGCATGAGCACCGCTGAGACAAGGGAAGGTGGCAGTTCCAGGGACTGCTCCATATTCATTTaGTCCAGCTCCTCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: NRASMSTAETREGGSSRDCSIFI*SSSSSI Trigger: AATGGAAGAGGAGCTGGACCAAATGAATATGGAGCA...GTCCCTGGAACTGCCACCTTCCCTTGTCTCAGCGGTGCTCATGCTTGCTCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | TCTCATCTCTTGAGAACCTCTGTAGAAGGGCTGTCATTACACACAGTGGTGGCTTCCTCAGAGACCGAGTaGTTCCCAGGCTGCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: SHLLRTSVEGLSLHTVVASSETE*FPGCII Trigger: GATGATGCAGCCTGGGAACCACTCGGTCTCTGAGGA...AGCCACCACTGTGTGTAATGACAGCCCTTCTACAGAGGTTCTCAAGAGATGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185394.2 |
||
| CDS-3UTR TCA 90 bp | ACGGCGTGCGGTCTCACTGGTGAGGTTCATTTAGATGACAGACAGTTTGCCTTGCCAGGGTGGCAATTCTaGAATGCTTCATTTTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TACGLTGEVHLDDRQFALPGWQF*NASFCV Trigger: CACGCAAAATGAAGCATTTCAGAATTGCCACCCTGG...CAAGGCAAACTGTCTGTCATCTAAATGAACCTCACCAGTGAGACCGCACGCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | GCATCCATCCATTCAGTACAGCTTCTTGGATTTACCTTATGGGAGCTGCAAAACGGAAACGGGCTCTCCTaGGCTCTGAGGGTTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASIHSVQLLGFTLWELQNGNGLS*ALRVSS Trigger: AGAGCTAACCCTCAGAGCTCAGGAGAGCCCGTTTCC...GTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | ACGGCGTGCGGTCTCACTGGTGAGGTTCATTTAGATGACAGACAGTTTGCCTTGTTACGGACACTGTCTTaGTGCTTCTTGAGCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TACGLTGEVHLDDRQFALLRTLS*CFLSLE Trigger: CTCCAAGCTCAAGAAGCATCAAGACAGTGTCCGTAA...CAAGGCAAACTGTCTGTCATCTAAATGAACCTCACCAGTGAGACCGCACGCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | ACGGCGTGCGGTCTCACTGGTGAGGTTCATTTAGATGACAGACAGTTTGCCTTGAAGCCTCTGTCTCTCTaGAAAGAGCTGGTTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TACGLTGEVHLDDRQFALKPLSL*KELVSL Trigger: GAGTGAAACCAGCTCTTTTCAGAGAGACAGAGGCTT...CAAGGCAAACTGTCTGTCATCTAAATGAACCTCACCAGTGAGACCGCACGCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGACTCCCTTGATTTCAGTGAGCATCCATCCATTCAGTACAGCTTCTTGGAGTGGTTCCCAGGCTaGATCATCTGTCTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSDSLDFSEHPSIQYSFLEWFPG*IICLRS Trigger: GCTCCTGAGACAGATGATGCAGCCTGGGAACCACTC...CAAGAAGCTGTACTGAATGGATGGATGCTCACTGAAATCAAGGGAGTCTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR GCA 90 bp | ATGAGCACCGCTGAGACAAGGGAAGGTGGCAGTTCCAGGGACACCAAACAAACGAGATCTGGTCACCTTTaGTTTCCATCTTCTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: MSTAETREGGSSRDTKQTRSGHL*FPSSWL Trigger: TAGCCAAGAAGATGGAAAGCAAAGGTGACCAGATCT...CGTTTGTTTGGTGTCCCTGGAACTGCCACCTTCCCTTGTCTCAGCGGTGCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR TCA 90 bp | AAAACCACGGAGACGGCGTGCGGTCTCACTGGTGAGGTTCATTTAGATGACAGACCTGGGAAGTTGTTCTaGAAGGCTTCTTTCTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KTTETACGLTGEVHLDDRPGKLF*KASFSQ Trigger: TTGAGAGAAAGAAGCCTTTCAGAACAACTTCCCAGG...TCTGTCATCTAAATGAACCTCACCAGTGAGACCGCACGCCGTCTCCGTGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | ATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCAAGCAGGAAACGGGCTCTCCTaGGCTCTGAGGGTTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IFTKLHNYCALPFQTEQAGNGLS*ALRVSS Trigger: AGAGCTAACCCTCAGAGCTCAGGAGAGCCCGTTTCC...TGCTTGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR GCA 90 bp | TTCAAGGGTTCCTTAAGAGCATATGAAATAAAAACCACGGAGACGGCGTGCGGTAACTGCTCCAGCTCCTaGTCTATGTCCTCAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: FKGSLRAYEIKTTETACGNCSSS*SMSSET Trigger: GGTCTCTGAGGACATAGAGCAGGAGCTGGAGCAGTT...ACCGCACGCCGTCTCCGTGGTTTTTATTTCATATGCTCTTAAGGAACCCTTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR GCA 90 bp | AGGTCAGACTCCCTTGATTTCAGTGAGCATCCATCCATTCAGTACAGCTTCTTGAACTGCTCCAGCTCCTaGTCTATGTCCTCAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: RSDSLDFSEHPSIQYSFLNCSSS*SMSSET Trigger: GGTCTCTGAGGACATAGAGCAGGAGCTGGAGCAGTT...CAAGAAGCTGTACTGAATGGATGGATGCTCACTGAAATCAAGGGAGTCTGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | AGGTCATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCTCCTCAGAGACCGAGTaGTTCCCAGGCTGCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: RSFSQNCTITVPSLSKQSSSETE*FPGCII Trigger: GATGATGCAGCCTGGGAACCACTCGGTCTCTGAGGA...GCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAATGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CCA 90 bp | AGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGGAACCCTGGTCCTCAGAGACCGAGTaGTTCCCAGGCTGCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: RPLVNNNEKQSFRCQEPWSSETE*FPGCII Trigger: GATGATGCAGCCTGGGAACCACTCGGTCTCTGAGGA...CCAGGGTTCCTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CCA 90 bp | ATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGGCTGTGGACCTGCACTaGTTGAAAGCCTCTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MGAAKQMLLKSFMRSRPLAVDLH*LKASVS Trigger: AGAGACAGAGGCTTTCAACCAGTGCAGGTCCACAGC...CAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR TCA 90 bp | ATGAGCACCGCTGAGACAAGGGAAGGTGGCAGTTCCAGGGACACCAAACAAACGTTCATTTTGCGTGAATaGTGGAAGATGCATTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MSTAETREGGSSRDTKQTFILRE*WKMHSF Trigger: GAAAGAATGCATCTTCCATCATTCACGCAAAATGAA...CGTTTGTTTGGTGTCCCTGGAACTGCCACCTTCCCTTGTCTCAGCGGTGCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR GCA 90 bp | CATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCAAGCAACTGCTCCAGCTCCTaGTCTATGTCCTCAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: HFHKTAQLLCPPFPNRASNCSSS*SMSSET Trigger: GGTCTCTGAGGACATAGAGCAGGAGCTGGAGCAGTT...GCTTGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR GCA 90 bp | AGGTCATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCAACTGCTCCAGCTCCTaGTCTATGTCCTCAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: RSFSQNCTITVPSLSKQSNCSSS*SMSSET Trigger: GGTCTCTGAGGACATAGAGCAGGAGCTGGAGCAGTT...GCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAATGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CCA 90 bp | TGGATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTCCTCAGAGACCGAGTaGTTCCCAGGCTGCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: WIYLMGAAKQMLLKSFMRSSETE*FPGCII Trigger: GATGATGCAGCCTGGGAACCACTCGGTCTCTGAGGA...CCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CCA 90 bp | ATCCATCCATTCAGTACAGCTTCTTGGATTTACCTTATGGGAGCTGCAAAACAGTCCTCAGAGACCGAGTaGTTCCCAGGCTGCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: IHPFSTASWIYLMGAAKQSSETE*FPGCII Trigger: GATGATGCAGCCTGGGAACCACTCGGTCTCTGAGGA...CTGTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CCA 90 bp | GCATCCATCCATTCAGTACAGCTTCTTGGATTTACCTTATGGGAGCTGCAAAACGCTGTGGACCTGCACTaGTTGAAAGCCTCTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASIHSVQLLGFTLWELQNAVDLH*LKASVS Trigger: AGAGACAGAGGCTTTCAACCAGTGCAGGTCCACAGC...GTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR TCA 90 bp | ATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGGTTAACAACAATGAAAAGGGAAACGGGCTCTCCTaGGCTCTGAGGGTTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MLLKSFMRSRPLVNNNEKGNGLS*ALRVSS Trigger: AGAGCTAACCCTCAGAGCTCAGGAGAGCCCGTTTCC...CTTTTCATTGTTGTTAACCAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR TCA 90 bp | TTCAAGGGTTCCTTAAGAGCATATGAAATAAAAACCACGGAGACGGCGTGCGGTTTACGGACACTGTCTTaGTGCTTCTTGAGCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FKGSLRAYEIKTTETACGLRTLS*CFLSLE Trigger: CTCCAAGCTCAAGAAGCATCAAGACAGTGTCCGTAA...ACCGCACGCCGTCTCCGTGGTTTTTATTTCATATGCTCTTAAGGAACCCTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR TCA 90 bp | AGGTCAGACTCCCTTGATTTCAGTGAGCATCCATCCATTCAGTACAGCTTCTTGTTACGGACACTGTCTTaGTGCTTCTTGAGCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSDSLDFSEHPSIQYSFLLRTLS*CFLSLE Trigger: CTCCAAGCTCAAGAAGCATCAAGACAGTGTCCGTAA...CAAGAAGCTGTACTGAATGGATGGATGCTCACTGAAATCAAGGGAGTCTGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR GCA 90 bp | TGGATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTGTCTTGAAACAGCCTaGGCTGATGCTCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WIYLMGAAKQMLLKSFMRCLETA*ADAPPP Trigger: AGGAGGAGGAGCATCAGCGCAGGCTGTTTCAAGACA...CCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR GCA 90 bp | ATCCATCCATTCAGTACAGCTTCTTGGATTTACCTTATGGGAGCTGCAAAACAGTGTCTTGAAACAGCCTaGGCTGATGCTCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IHPFSTASWIYLMGAAKQCLETA*ADAPPP Trigger: AGGAGGAGGAGCATCAGCGCAGGCTGTTTCAAGACA...CTGTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR GCA 90 bp | TGGATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGAACTGCTCCAGCTCCTaGTCTATGTCCTCAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: WIYLMGAAKQMLLKSFMRNCSSS*SMSSET Trigger: GGTCTCTGAGGACATAGAGCAGGAGCTGGAGCAGTT...CCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGACTCCCTTGATTTCAGTGAGCATCCATCCATTCAGTACAGCTTCTTGACAAACTGTCACAAATaGAAACGGGCTCTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSDSLDFSEHPSIQYSFLTNCHK*KRALLS Trigger: GCTCAGGAGAGCCCGTTTCCATTTGTGACAGTTTGT...CAAGAAGCTGTACTGAATGGATGGATGCTCACTGAAATCAAGGGAGTCTGACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CCA 90 bp | ATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTCATCCTCAGAGACCGAGTaGTTCCCAGGCTGCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: IYLMGAAKQMLLKSFMRSSSETE*FPGCII Trigger: GATGATGCAGCCTGGGAACCACTCGGTCTCTGAGGA...TGACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGCCTGGGAAGTTGTTCTaGAAGGCTTCTTTCTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MGAAKQMLLKSFMRSRPLPGKLF*KASFSQ Trigger: TTGAGAGAAAGAAGCCTTTCAGAACAACTTCCCAGG...CAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | AGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGGAACCCTGGAAGCCTCTGTCTCTCTaGAAAGAGCTGGTTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RPLVNNNEKQSFRCQEPWKPLSL*KELVSL Trigger: GAGTGAAACCAGCTCTTTTCAGAGAGACAGAGGCTT...CCAGGGTTCCTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | GCATCCATCCATTCAGTACAGCTTCTTGGATTTACCTTATGGGAGCTGCAAAACAAGCCTCTGTCTCTCTaGAAAGAGCTGGTTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: ASIHSVQLLGFTLWELQNKPLSL*KELVSL Trigger: GAGTGAAACCAGCTCTTTTCAGAGAGACAGAGGCTT...GTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR GCA 90 bp | ATGAGGTCAAGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGTGTCTTGAAACAGCCTaGGCTGATGCTCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MRSRPLVNNNEKQSFRCQCLETA*ADAPPP Trigger: AGGAGGAGGAGCATCAGCGCAGGCTGTTTCAAGACA...CTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCTTGACCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR GCA 90 bp | ATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTCAAACTGCTCCAGCTCCTaGTCTATGTCCTCAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: IYLMGAAKQMLLKSFMRSNCSSS*SMSSET Trigger: GGTCTCTGAGGACATAGAGCAGGAGCTGGAGCAGTT...TGACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | AGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGGAACCCTGGACAAACTGTCACAAATaGAAACGGGCTCTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPLVNNNEKQSFRCQEPWTNCHK*KRALLS Trigger: GCTCAGGAGAGCCCGTTTCCATTTGTGACAGTTTGT...CCAGGGTTCCTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | GGTCATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCAACAAACTGTCACAAATaGAAACGGGCTCTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHFHKTAQLLCPPFPNRATNCHK*KRALLS Trigger: GCTCAGGAGAGCCCGTTTCCATTTGTGACAGTTTGT...TGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAATGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTCAAGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGGCTGTGGACCTGCACTaGTTGAAAGCCTCTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MRSRPLVNNNEKQSFRCQAVDLH*LKASVS Trigger: AGAGACAGAGGCTTTCAACCAGTGCAGGTCCACAGC...CTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCTTGACCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| 3UTR CAA 72 bp | TCAAACTGTGGAATAGTACCCACAGGTCAGACTCCCTaGATTTCAGTGAGCATCCATCCATTCAGTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNCGIVPTGQTP*ISVSIHPFSTA Trigger: AGCTGTACTGAATGGATGGATGCTCACTGAAATCAAGGGAGTCTGACCTGTGGGTACTATTCCACAGTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | ATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCAAGCACCAGGGTGGCAATTCTaGAATGCTTCATTTTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: IFTKLHNYCALPFQTEQAPGWQF*NASFCV Trigger: CACGCAAAATGAAGCATTTCAGAATTGCCACCCTGG...TGCTTGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | TGGATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGCCAGGGTGGCAATTCTaGAATGCTTCATTTTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: WIYLMGAAKQMLLKSFMRPGWQF*NASFCV Trigger: CACGCAAAATGAAGCATTTCAGAATTGCCACCCTGG...CCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | CATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCAAGCCCTGGGAAGTTGTTCTaGAAGGCTTCTTTCTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HFHKTAQLLCPPFPNRASPGKLF*KASFSQ Trigger: TTGAGAGAAAGAAGCCTTTCAGAACAACTTCCCAGG...GCTTGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR GCA 90 bp | GTAAGACACTCAAGTGATTGCTGTGTATCTTTTAGTACACCATGTCTCCATACTAACTGCTCCAGCTCCTaGTCTATGTCCTCAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: VRHSSDCCVSFSTPCLHTNCSSS*SMSSET Trigger: GGTCTCTGAGGACATAGAGCAGGAGCTGGAGCAGTT...AGTATGGAGACATGGTGTACTAAAAGATACACAGCAATCACTTGAGTGTCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185394.2 |
||
| CDS-3UTR GCA 90 bp | TTCAAGGGTTCCTTAAGAGCATATGAAATAAAAACCACGGAGACGGCGTGCGGTAGATCTGGTCACCTTTaGTTTCCATCTTCTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FKGSLRAYEIKTTETACGRSGHL*FPSSWL Trigger: TAGCCAAGAAGATGGAAAGCAAAGGTGACCAGATCT...ACCGCACGCCGTCTCCGTGGTTTTTATTTCATATGCTCTTAAGGAACCCTTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTCAAGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGGGGTTAGCTCTAGCCTaGGAAGTTGTTCTGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MRSRPLVNNNEKQSFRCQGLALA*EVVLKG Trigger: GCCTTTCAGAACAACTTCCCAGGCTAGAGCTAACCC...CTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCTTGACCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | ATCCATCCATTCAGTACAGCTTCTTGGATTTACCTTATGGGAGCTGCAAAACAGACAAACTGTCACAAATaGAAACGGGCTCTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IHPFSTASWIYLMGAAKQTNCHK*KRALLS Trigger: GCTCAGGAGAGCCCGTTTCCATTTGTGACAGTTTGT...CTGTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | ATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGGTTAACAACAATGAAAAGGCTGTGGACCTGCACTaGTTGAAAGCCTCTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MLLKSFMRSRPLVNNNEKAVDLH*LKASVS Trigger: AGAGACAGAGGCTTTCAACCAGTGCAGGTCCACAGC...CTTTTCATTGTTGTTAACCAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | ATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTCACCAGGGTGGCAATTCTaGAATGCTTCATTTTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: IYLMGAAKQMLLKSFMRSPGWQF*NASFCV Trigger: CACGCAAAATGAAGCATTTCAGAATTGCCACCCTGG...TGACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | AGGTCAAGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGGAACCAGGGTGGCAATTCTaGAATGCTTCATTTTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSRPLVNNNEKQSFRCQEPGWQF*NASFCV Trigger: CACGCAAAATGAAGCATTTCAGAATTGCCACCCTGG...TTCCTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCTTGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | TGGATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGCCTGGGAAGTTGTTCTaGAAGGCTTCTTTCTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WIYLMGAAKQMLLKSFMRPGKLF*KASFSQ Trigger: TTGAGAGAAAGAAGCCTTTCAGAACAACTTCCCAGG...CCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | ATGAGGTCAAGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGTTACGGACACTGTCTTaGTGCTTCTTGAGCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MRSRPLVNNNEKQSFRCQLRTLS*CFLSLE Trigger: CTCCAAGCTCAAGAAGCATCAAGACAGTGTCCGTAA...CTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCTTGACCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | ATGAGGTCAAGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGAAGCCTCTGTCTCTCTaGAAAGAGCTGGTTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: MRSRPLVNNNEKQSFRCQKPLSL*KELVSL Trigger: GAGTGAAACCAGCTCTTTTCAGAGAGACAGAGGCTT...CTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCTTGACCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR GCA 90 bp | GCATCCATCCATTCAGTACAGCTTCTTGGATTTACCTTATGGGAGCTGCAAAACAGATCTGGTCACCTTTaGTTTCCATCTTCTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ASIHSVQLLGFTLWELQNRSGHL*FPSSWL Trigger: TAGCCAAGAAGATGGAAAGCAAAGGTGACCAGATCT...GTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTCAAGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGACAAACTGTCACAAATaGAAACGGGCTCTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MRSRPLVNNNEKQSFRCQTNCHK*KRALLS Trigger: GCTCAGGAGAGCCCGTTTCCATTTGTGACAGTTTGT...CTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCTTGACCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | ATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTCAACAAACTGTCACAAATaGAAACGGGCTCTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IYLMGAAKQMLLKSFMRSTNCHK*KRALLS Trigger: GCTCAGGAGAGCCCGTTTCCATTTGTGACAGTTTGT...TGACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | AGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGGAACCCTGGTGCTCCATATTCATTTaGTCCAGCTCCTCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: RPLVNNNEKQSFRCQEPWCSIFI*SSSSSI Trigger: AATGGAAGAGGAGCTGGACCAAATGAATATGGAGCA...CCAGGGTTCCTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| 3UTR CAA 72 bp | GATTTCAGTGAGCATCCATCCATTCAGTACAGCTTCTaGGATTTACCTTATGGGAGCTGCAAAACAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: DFSEHPSIQYSF*DLPYGSCKTDA Trigger: AGCATCTGTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGATGCTCACTGAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGTTCATTTTGCGTGAATaGTGGAAGATGCATTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MGAAKQMLLKSFMRSRPLFILRE*WKMHSF Trigger: GAAAGAATGCATCTTCCATCATTCACGCAAAATGAA...CAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | CAGATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGGTTAACAACAATGAACCTGGGAAGTTGTTCTaGAAGGCTTCTTTCTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QMLLKSFMRSRPLVNNNEPGKLF*KASFSQ Trigger: TTGAGAGAAAGAAGCCTTTCAGAACAACTTCCCAGG...TTCATTGTTGTTAACCAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | ATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCAAGCATGCTCCATATTCATTTaGTCCAGCTCCTCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: IFTKLHNYCALPFQTEQACSIFI*SSSSSI Trigger: AATGGAAGAGGAGCTGGACCAAATGAATATGGAGCA...TGCTTGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | AGGTCATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCTTCATTTTGCGTGAATaGTGGAAGATGCATTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSFSQNCTITVPSLSKQSFILRE*WKMHSF Trigger: GAAAGAATGCATCTTCCATCATTCACGCAAAATGAA...GCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAATGACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | GGTCATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCATTCATTTTGCGTGAATaGTGGAAGATGCATTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GHFHKTAQLLCPPFPNRAFILRE*WKMHSF Trigger: GAAAGAATGCATCTTCCATCATTCACGCAAAATGAA...TGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAATGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | GGTCATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCATTCCTTACAATGCTTTaGATTCGAAACTGTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: GHFHKTAQLLCPPFPNRAFLTML*IRNCGH Trigger: ATGTCCACAGTTTCGAATTCAAAGCATTGTAAGGAA...TGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAATGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019951.16 ENSMUST00000186239.7 ENSMUST00000190022.7 |
||
| CDS-3UTR GCA 90 bp | ATGAGGTCAAGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGAGATCTGGTCACCTTTaGTTTCCATCTTCTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: MRSRPLVNNNEKQSFRCQRSGHL*FPSSWL Trigger: TAGCCAAGAAGATGGAAAGCAAAGGTGACCAGATCT...CTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCTTGACCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | GCATCCATCCATTCAGTACAGCTTCTTGGATTTACCTTATGGGAGCTGCAAAACCTTTCTCTCAAAAGTTaGTGTTCTAAACTTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASIHSVQLLGFTLWELQNLSLKS*CSKLVV Trigger: GACCACAAGTTTAGAACACCAACTTTTGAGAGAAAG...GTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTCAAGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGTGCTCCATATTCATTTaGTCCAGCTCCTCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: MRSRPLVNNNEKQSFRCQCSIFI*SSSSSI Trigger: AATGGAAGAGGAGCTGGACCAAATGAATATGGAGCA...CTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCTTGACCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | CAGATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGGTTAACAACAATGAATGCTCCATATTCATTTaGTCCAGCTCCTCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QMLLKSFMRSRPLVNNNECSIFI*SSSSSI Trigger: AATGGAAGAGGAGCTGGACCAAATGAATATGGAGCA...TTCATTGTTGTTAACCAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCATCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR TCA 90 bp | ATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCAAGCATTCCTTACAATGCTTTaGATTCGAAACTGTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: IFTKLHNYCALPFQTEQAFLTML*IRNCGH Trigger: ATGTCCACAGTTTCGAATTCAAAGCATTGTAAGGAA...TGCTTGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019951.16 ENSMUST00000186239.7 ENSMUST00000190022.7 |
||
| CDS-3UTR GCA 90 bp | GTAAGACACTCAAGTGATTGCTGTGTATCTTTTAGTACACCATGTCTCCATACTAGATCTGGTCACCTTTaGTTTCCATCTTCTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VRHSSDCCVSFSTPCLHTRSGHL*FPSSWL Trigger: TAGCCAAGAAGATGGAAAGCAAAGGTGACCAGATCT...AGTATGGAGACATGGTGTACTAAAAGATACACAGCAATCACTTGAGTGTCTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185394.2 |
||
| CDS-3UTR CCA 90 bp | TGGATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGCTTTCTCTCAAAAGTTaGTGTTCTAAACTTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WIYLMGAAKQMLLKSFMRLSLKS*CSKLVV Trigger: GACCACAAGTTTAGAACACCAACTTTTGAGAGAAAG...CCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | ATCCATCCATTCAGTACAGCTTCTTGGATTTACCTTATGGGAGCTGCAAAACAGCTTTCTCTCAAAAGTTaGTGTTCTAAACTTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IHPFSTASWIYLMGAAKQLSLKS*CSKLVV Trigger: GACCACAAGTTTAGAACACCAACTTTTGAGAGAAAG...CTGTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CCA 90 bp | ATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGGTTAACAACAATGAAAAGTGCTCCATATTCATTTaGTCCAGCTCCTCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: MLLKSFMRSRPLVNNNEKCSIFI*SSSSSI Trigger: AATGGAAGAGGAGCTGGACCAAATGAATATGGAGCA...CTTTTCATTGTTGTTAACCAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| 3UTR CAA 72 bp | CAGATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTaGGTTAACAACAATGAAAAGCAGTCATTTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: QMLLKSFMRSRP*VNNNEKQSFRC Trigger: GCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR TCA 90 bp | CAGATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGGTTAACAACAATGAATTCATTTTGCGTGAATaGTGGAAGATGCATTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QMLLKSFMRSRPLVNNNEFILRE*WKMHSF Trigger: GAAAGAATGCATCTTCCATCATTCACGCAAAATGAA...TTCATTGTTGTTAACCAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR TCA 90 bp | ATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTCATTCCTTACAATGCTTTaGATTCGAAACTGTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: IYLMGAAKQMLLKSFMRSFLTML*IRNCGH Trigger: ATGTCCACAGTTTCGAATTCAAAGCATTGTAAGGAA...TGACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019951.16 ENSMUST00000186239.7 ENSMUST00000190022.7 |
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| CDS-3UTR CCA 90 bp | CAGATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGGTTAACAACAATGAACTTTCTCTCAAAAGTTaGTGTTCTAAACTTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QMLLKSFMRSRPLVNNNELSLKS*CSKLVV Trigger: GACCACAAGTTTAGAACACCAACTTTTGAGAGAAAG...TTCATTGTTGTTAACCAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CCA 90 bp | ATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGGTTAACAACAATGAAAAGTCCAATTGCTTCTCTTaGTTGTTTGGACTATTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: MLLKSFMRSRPLVNNNEKSNCFS*LFGLLN Trigger: GTTTAATAGTCCAAACAACCAAGAGAAGCAATTGGA...CTTTTCATTGTTGTTAACCAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | ATGAGCACCGCTGAGACAAGGGAAGGTGGCAGTTCCAGGGACACCAAACAAACGGCGAGGTTCCTCTCGTaGGTCTCCTCCTCTAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: MSTAETREGGSSRDTKQTARFLS*VSSSRA Trigger: GGCCCTAGAGGAGGAGACCAACGAGAGGAACCTCGC...CGTTTGTTTGGTGTCCCTGGAACTGCCACCTTCCCTTGTCTCAGCGGTGCTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 |
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| CDS CCA 90 bp | TTGGCTAACTGCTCCAGCTCCTGCTCTATGTCCTCAGAGACCGAGTaGTTCCCAGGCTGCATCATCTGTCTCAGGAGCTCTCTGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LANCSSSCSMSSETE*FPGCIICLRSSLCS Trigger: GGAGCACAGAGAGCTCCTGAGACAGATGATGCAGCCTGGGAACCACTCGGTCTCTGAGGACATAGAGCAGGAGCTGGAGCAGTTAGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000185394.2 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | AACAGAGCAAGCATGAGCACCGCTGAGACAAGGGAAGGTGGCAGTTCCAGGGACGTGGACCTGCACTGGTaGAAAGCCTCTGTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NRASMSTAETREGGSSRDVDLHW*KASVSL Trigger: CAGAGAGACAGAGGCTTTCAACCAGTGCAGGTCCAC...GTCCCTGGAACTGCCACCTTCCCTTGTCTCAGCGGTGCTCATGCTTGCTCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS CCA 90 bp | GATGTCATCGCGCCTCAGCTTCGACTGCAGGCTGTGGACCTGCACTaGTTGAAAGCCTCTGTCTCTCTGAAAAGAGCTGGTTTCACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: DVIAPQLRLQAVDLH*LKASVSLKRAGFTH Trigger: GTGAGTGAAACCAGCTCTTTTCAGAGAGACAGAGGCTTTCAACCAGTGCAGGTCCACAGCCTGCAGTCGAAGCTGAGGCGCGATGACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | ACGGCGTGCGGTCTCACTGGTGAGGTTCATTTAGATGACAGACAGTTTGCCTTGGTGGACCTGCACTGGTaGAAAGCCTCTGTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TACGLTGEVHLDDRQFALVDLHW*KASVSL Trigger: CAGAGAGACAGAGGCTTTCAACCAGTGCAGGTCCAC...CAAGGCAAACTGTCTGTCATCTAAATGAACCTCACCAGTGAGACCGCACGCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | AGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGGAACCCTGGGCGAGGTTCCTCTCGTaGGTCTCCTCCTCTAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPLVNNNEKQSFRCQEPWARFLS*VSSSRA Trigger: GGCCCTAGAGGAGGAGACCAACGAGAGGAACCTCGC...CCAGGGTTCCTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 |
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| CDS GCA 90 bp | ACCGAGTGGTTCCCAGGCTGCATCATCTGTCTCAGGAGCTCTCTGTaGTCCATATTCATTTGGTCCAGCTCCTCTTCCATTGTCATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TEWFPGCIICLRSSL*SIFIWSSSSSIVIK Trigger: CTTGATGACAATGGAAGAGGAGCTGGACCAAATGAATATGGAGCACAGAGAGCTCCTGAGACAGATGATGCAGCCTGGGAACCACTCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | ATCCATCCATTCAGTACAGCTTCTTGGATTTACCTTATGGGAGCTGCAAAACAGGCGAGGTTCCTCTCGTaGGTCTCCTCCTCTAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IHPFSTASWIYLMGAAKQARFLS*VSSSRA Trigger: GGCCCTAGAGGAGGAGACCAACGAGAGGAACCTCGC...CTGTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 |
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| CDS-3UTR CAA 90 bp | CAGATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGGTTAACAACAATGAAGCGAGGTTCCTCTCGTaGGTCTCCTCCTCTAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QMLLKSFMRSRPLVNNNEARFLS*VSSSRA Trigger: GGCCCTAGAGGAGGAGACCAACGAGAGGAACCTCGC...TTCATTGTTGTTAACCAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 |
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| CDS-3UTR CAA 90 bp | ATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGGTGGACCTGCACTGGTaGAAAGCCTCTGTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: MGAAKQMLLKSFMRSRPLVDLHW*KASVSL Trigger: CAGAGAGACAGAGGCTTTCAACCAGTGCAGGTCCAC...CAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | AACAGAGCAAGCATGAGCACCGCTGAGACAAGGGAAGGTGGCAGTTCCAGGGACGCTTATATCTTTCTTTaGTTTAATCAGCTCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: NRASMSTAETREGGSSRDAYIFL*FNQLLV Trigger: CACCAGGAGCTGATTAAACAAAAGAAAGATATAAGC...GTCCCTGGAACTGCCACCTTCCCTTGTCTCAGCGGTGCTCATGCTTGCTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 |
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| CDS-3UTR CAA 90 bp | AAAACCACGGAGACGGCGTGCGGTCTCACTGGTGAGGTTCATTTAGATGACAGAGATTTCAAATCCAGTTaGAAGCTCACAGGCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KTTETACGLTGEVHLDDRDFKSS*KLTGSV Trigger: GACAGAGCCTGTGAGCTTCAAACTGGATTTGAAATC...TCTGTCATCTAAATGAACCTCACCAGTGAGACCGCACGCCGTCTCCGTGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019951.16 ENSMUST00000186239.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | AAAACCACGGAGACGGCGTGCGGTCTCACTGGTGAGGTTCATTTAGATGACAGATTTACGGACACTGTCTaGATGCTTCTTGAGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KTTETACGLTGEVHLDDRFTDTV*MLLELG Trigger: TCCAAGCTCAAGAAGCATCAAGACAGTGTCCGTAAA...TCTGTCATCTAAATGAACCTCACCAGTGAGACCGCACGCCGTCTCCGTGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | TGGATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGGTGGACCTGCACTGGTaGAAAGCCTCTGTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WIYLMGAAKQMLLKSFMRVDLHW*KASVSL Trigger: CAGAGAGACAGAGGCTTTCAACCAGTGCAGGTCCAC...CCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS CCA 90 bp | TCTAGCCTGGGAAGTTGTTCTGAAAGGCTTCTTTCTCTCAAAAGTTaGTGTTCTAAACTTGTGGTCCCTTTGCTGAGGCGGCTCTCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLGSCSERLLSLKS*CSKLVVPLLRRLSF Trigger: AAACGAGAGCCGCCTCAGCAAAGGGACCACAAGTTTAGAACACCAACTTTTGAGAGAAAGAAGCCTTTCAGAACAACTTCCCAGGCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | ATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGCCAGCTCCTCTTCCATaGTCATCAAGAGTTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: MGAAKQMLLKSFMRSRPLPAPLP*SSRVQT Trigger: TGTCTGAACTCTTGATGACAATGGAAGAGGAGCTGG...CAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | TTCAAGGGTTCCTTAAGAGCATATGAAATAAAAACCACGGAGACGGCGTGCGGTCCAGCTCCTCTTCCATaGTCATCAAGAGTTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: FKGSLRAYEIKTTETACGPAPLP*SSRVQT Trigger: TGTCTGAACTCTTGATGACAATGGAAGAGGAGCTGG...ACCGCACGCCGTCTCCGTGGTTTTTATTTCATATGCTCTTAAGGAACCCTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | ATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTCAGTGGACCTGCACTGGTaGAAAGCCTCTGTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IYLMGAAKQMLLKSFMRSVDLHW*KASVSL Trigger: CAGAGAGACAGAGGCTTTCAACCAGTGCAGGTCCAC...TGACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | CAGAGCAGAGAATGCTGGAAAGGTAACTGGAAGGGTGCTGAAGCAATAGCCTACTATTTGTTGGTTTGTTaGGTAACGGGGAGTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QSRECWKGNWKGAEAIAYYLLVC*VTGSVL Trigger: AAGGACACTCCCCGTTACCAAACAAACCAACAAATA...GTAGGCTATTGCTTCAGCACCCTTCCAGTTACCTTTCCAGCATTCTCTGCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185394.2 |
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| CDS-3UTR CAA 90 bp | AAAACCACGGAGACGGCGTGCGGTCTCACTGGTGAGGTTCATTTAGATGACAGATTTCCTTACAATGCTTaGAATTCGAAACTGTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: KTTETACGLTGEVHLDDRFPYNA*NSKLWT Trigger: TGTCCACAGTTTCGAATTCAAAGCATTGTAAGGAAA...TCTGTCATCTAAATGAACCTCACCAGTGAGACCGCACGCCGTCTCCGTGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019951.16 ENSMUST00000186239.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | AGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGGAACCCTGGCCAGCTCCTCTTCCATaGTCATCAAGAGTTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: RPLVNNNEKQSFRCQEPWPAPLP*SSRVQT Trigger: TGTCTGAACTCTTGATGACAATGGAAGAGGAGCTGG...CCAGGGTTCCTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | AGGTCATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCGATTTCAAATCCAGTTaGAAGCTCACAGGCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RSFSQNCTITVPSLSKQSDFKSS*KLTGSV Trigger: GACAGAGCCTGTGAGCTTCAAACTGGATTTGAAATC...GCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAATGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019951.16 ENSMUST00000186239.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | TGGATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGCCAGCTCCTCTTCCATaGTCATCAAGAGTTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: WIYLMGAAKQMLLKSFMRPAPLP*SSRVQT Trigger: TGTCTGAACTCTTGATGACAATGGAAGAGGAGCTGG...CCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | GCATCCATCCATTCAGTACAGCTTCTTGGATTTACCTTATGGGAGCTGCAAAACTTTACGGACACTGTCTaGATGCTTCTTGAGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASIHSVQLLGFTLWELQNFTDTV*MLLELG Trigger: TCCAAGCTCAAGAAGCATCAAGACAGTGTCCGTAAA...GTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | AGGCCTTTGGTTAACAACAATGAAAAGCAGTCATTTAGATGCCAGGAACCCTGGTTTACGGACACTGTCTaGATGCTTCTTGAGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPLVNNNEKQSFRCQEPWFTDTV*MLLELG Trigger: TCCAAGCTCAAGAAGCATCAAGACAGTGTCCGTAAA...CCAGGGTTCCTGGCATCTAAATGACTGCTTTTCATTGTTGTTAACCAAAGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | ATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCAAGCAGATTTCAAATCCAGTTaGAAGCTCACAGGCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IFTKLHNYCALPFQTEQADFKSS*KLTGSV Trigger: GACAGAGCCTGTGAGCTTCAAACTGGATTTGAAATC...TGCTTGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019951.16 ENSMUST00000186239.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | CAGATGCTTCTAAAGAGCTTCATGAGGTCAAGGCCTTTGGTTAACAACAATGAACCAGCTCCTCTTCCATaGTCATCAAGAGTTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: QMLLKSFMRSRPLVNNNEPAPLP*SSRVQT Trigger: TGTCTGAACTCTTGATGACAATGGAAGAGGAGCTGG...TTCATTGTTGTTAACCAAAGGCCTTGACCTCATGAAGCTCTTTAGAAGCATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | ATCCATCCATTCAGTACAGCTTCTTGGATTTACCTTATGGGAGCTGCAAAACAGTTTACGGACACTGTCTaGATGCTTCTTGAGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: IHPFSTASWIYLMGAAKQFTDTV*MLLELG Trigger: TCCAAGCTCAAGAAGCATCAAGACAGTGTCCGTAAA...CTGTTTTGCAGCTCCCATAAGGTAAATCCAAGAAGCTGTACTGAATGGATGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS-3UTR CAA 90 bp | TGGATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTTTACGGACACTGTCTaGATGCTTCTTGAGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WIYLMGAAKQMLLKSFMRFTDTV*MLLELG Trigger: TCCAAGCTCAAGAAGCATCAAGACAGTGTCCGTAAA...CCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CAA 90 bp | TTCAAGGGTTCCTTAAGAGCATATGAAATAAAAACCACGGAGACGGCGTGCGGTTTTCCTTACAATGCTTaGAATTCGAAACTGTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: FKGSLRAYEIKTTETACGFPYNA*NSKLWT Trigger: TGTCCACAGTTTCGAATTCAAAGCATTGTAAGGAAA...ACCGCACGCCGTCTCCGTGGTTTTTATTTCATATGCTCTTAAGGAACCCTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019951.16 ENSMUST00000186239.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CAA 90 bp | ATTTACCTTATGGGAGCTGCAAAACAGATGCTTCTAAAGAGCTTCATGAGGTCATTTACGGACACTGTCTaGATGCTTCTTGAGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: IYLMGAAKQMLLKSFMRSFTDTV*MLLELG Trigger: TCCAAGCTCAAGAAGCATCAAGACAGTGTCCGTAAA...TGACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCATAAGGTAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
||
| CDS-3UTR CAA 90 bp | GGTCATTTTCACAAAACTGCACAATTACTGTGCCCTCCCTTTCCAAACAGAGCATTTCCTTACAATGCTTaGAATTCGAAACTGTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GHFHKTAQLLCPPFPNRAFPYNA*NSKLWT Trigger: TGTCCACAGTTTCGAATTCAAAGCATTGTAAGGAAA...TGCTCTGTTTGGAAAGGGAGGGCACAGTAATTGTGCAGTTTTGTGAAAATGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019951.16 ENSMUST00000186239.7 ENSMUST00000190022.7 |
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| CDS CCA 72 bp | TGCTCCAGCTCCTGCTCTATGTCCTCAGAGACCGAGTaGTTCCCAGGCTGCATCATCTGTCTCAGGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: CSSSCSMSSETE*FPGCIICLRSS Trigger: AGAGCTCCTGAGACAGATGATGCAGCCTGGGAACCACTCGGTCTCTGAGGACATAGAGCAGGAGCTGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000185394.2 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS CCA 72 bp | GCGCCTCAGCTTCGACTGCAGGCTGTGGACCTGCACTaGTTGAAAGCCTCTGTCTCTCTGAAAAGAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: APQLRLQAVDLH*LKASVSLKRAG Trigger: ACCAGCTCTTTTCAGAGAGACAGAGGCTTTCAACCAGTGCAGGTCCACAGCCTGCAGTCGAAGCTGAGGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS CAA 72 bp | CCTCAGCTTCGACTGCAGGCTGTGGACCTGCACTGGTaGAAAGCCTCTGTCTCTCTGAAAAGAGCTGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PQLRLQAVDLHW*KASVSLKRAGF Trigger: GAAACCAGCTCTTTTCAGAGAGACAGAGGCTTTCAACCAGTGCAGGTCCACAGCCTGCAGTCGAAGCTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS CAA 72 bp | TTTTTCCTGCAGTTTACGGACCTCACAGGCTCTGTCTaGAAACAGCCTGCGCTGATGCTCCTCCTCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: FFLQFTDLTGSV*KQPALMLLLLQ Trigger: CTGAAGGAGGAGGAGCATCAGCGCAGGCTGTTTCAAGACAGAGCCTGTGAGGTCCGTAAACTGCAGGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191498.2 |
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| CDS GCA 72 bp | ATCTGGTCACCTTTGCTTTCCATCTTCTTGGCTAACTaGTCCAGCTCCTGCTCTATGTCCTCAGAGACCGAG | + |
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Preference number: 6 (lower is better) Translates to: IWSPLLSIFLAN*SSSCSMSSETE Trigger: CTCGGTCTCTGAGGACATAGAGCAGGAGCTGGAGCAGTTAGCCAAGAAGATGGAAAGCAAAGGTGACCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000185394.2 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS GCA 72 bp | TTCCCAGGCTGCATCATCTGTCTCAGGAGCTCTCTGTaGTCCATATTCATTTGGTCCAGCTCCTCTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: FPGCIICLRSSL*SIFIWSSSSSI Trigger: AATGGAAGAGGAGCTGGACCAAATGAATATGGAGCACAGAGAGCTCCTGAGACAGATGATGCAGCCTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS CAA 72 bp | GATTTCAAATCCAGTTTGAAGCTCACAGGCTCTGTCTaGAAACAGCCTGCGCTGATGCTCCTCCTCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: DFKSSLKLTGSV*KQPALMLLLLQ Trigger: CTGAAGGAGGAGGAGCATCAGCGCAGGCTGTTTCAAGACAGAGCCTGTGAGCTTCAAACTGGATTTGAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019951.16 ENSMUST00000186239.7 ENSMUST00000190022.7 |
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| CDS CAA 72 bp | CATCTGTCTCAGGAGCTCTCTGTGCTCCATATTCATTaGGTCCAGCTCCTCTTCCATTGTCATCAAGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: HLSQELSVLHIH*VQLLFHCHQEF Trigger: GAACTCTTGATGACAATGGAAGAGGAGCTGGACCAAATGAATATGGAGCACAGAGAGCTCCTGAGACAGATG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS CCA 72 bp | ATCTGTCTCAGGAGCTCTCTGTGCTCCATATTCATTTaGTCCAGCTCCTCTTCCATTGTCATCAAGAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: ICLRSSLCSIFI*SSSSSIVIKSS Trigger: TGAACTCTTGATGACAATGGAAGAGGAGCTGGACCAAATGAATATGGAGCACAGAGAGCTCCTGAGACAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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| CDS CCA 72 bp | TGTATGCTTATATCTTTCTTTTGTTTAATCAGCTCCTaGTGTGCGAGGTTCCTCTCGTTGGTCTCCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: CMLISFFCLISS*CARFLSLVSSS Trigger: AGAGGAGGAGACCAACGAGAGGAACCTCGCACACCAGGAGCTGATTAAACAAAAGAAAGATATAAGCATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000191498.2 |
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| CDS CAA 90 bp | ACACATTTCCGGGGGCTGGTTTTTAAGTTCTTAGATCCTTTAGGGTaGCCATGGATACCTGAAGATTCATTTATCCTTGAGTTCTCAATT | + |
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Preference number: 6 (lower is better) Translates to: THFRGLVFKFLDPLG*PWIPEDSFILEFSI Trigger: AATTGAGAACTCAAGGATAAATGAATCTTCAGGTATCCATGGCAACCCTAAAGGATCTAAGAACTTAAAAACCAGCCCCCGGAAATGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000019951.16 ENSMUST00000105505.10 ENSMUST00000186239.7 ENSMUST00000187143.7 ENSMUST00000189770.7 ENSMUST00000190022.7 |
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