Pregenerated sensors for CEP43 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069135Ensembl transcript IDs: ENSMUST00000024636.15, ENSMUST00000097419.10, ENSMUST00000161898.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCAGACTCCAGATGCTCAGCAGCCCCAGGCTCTTCCACAGTACTaGAGAGATGACAGGGCACAGCATTATCTAACAAGACGACGACAG | + |
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Preference number: 1 (lower is better) Translates to: IQTPDAQQPQALPQY*RDDRAQHYLTRRRQ Trigger: CTGTCGTCGTCTTGTTAGATAATGCTGTGCCCTGTCATCTCTTCAGTACTGTGGAAGAGCCTGGGGCTGCTGAGCATCTGGAGTCTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR TCA 90 bp | TCCAGATGCTCAGCAGCCCCAGGCTCTTCCACAGTACTGAAGAGATaGCAGGGCACAGCATTATCTAACAAGACGACGACAGCATCTTCA | + |
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Preference number: 1 (lower is better) Translates to: SRCSAAPGSSTVLKR*QGTALSNKTTTASS Trigger: TGAAGATGCTGTCGTCGTCTTGTTAGATAATGCTGTGCCCTGTCATCTCTTCAGTACTGTGGAAGAGCCTGGGGCTGCTGAGCATCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR TCA 90 bp | GATAAACGTCGATGTGCTTACGCACTATGGACTGGAAAGTGGCACTaGTACAAACCACAGCACCTGCTCACTCACTCACTCACCATGGAT | + |
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Preference number: 1 (lower is better) Translates to: DKRRCAYALWTGKWH*YKPQHLLTHSLTMD Trigger: ATCCATGGTGAGTGAGTGAGTGAGCAGGTGCTGTGGTTTGTATCAGTGCCACTTTCCAGTCCATAGTGCGTAAGCACATCGACGTTTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR GCA 90 bp | ACGCACTATGGACTGGAAAGTGGCACTGATACAAACCACAGCACCTaGTCACTCACTCACTCACCATGGATCAGTGATGTCCAATTTCTC | + |
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Preference number: 1 (lower is better) Translates to: THYGLESGTDTNHST*SLTHSPWISDVQFL Trigger: GAGAAATTGGACATCACTGATCCATGGTGAGTGAGTGAGTGAGCAGGTGCTGTGGTTTGTATCAGTGCCACTTTCCAGTCCATAGTGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR CCA 90 bp | TATACAAAGCCACATCCTGCCATGCTTGCAGGCCAGTTCACTAACTaGAGTGCCTACCAAATATTAAGGCACACATCTGATCCAGACTCC | + |
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Preference number: 1 (lower is better) Translates to: YTKPHPAMLAGQFTN*SAYQILRHTSDPDS Trigger: GGAGTCTGGATCAGATGTGTGCCTTAATATTTGGTAGGCACTCCAGTTAGTGAACTGGCCTGCAAGCATGGCAGGATGTGGCTTTGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR GCA 90 bp | AAGTATTCAATACCTGCATGTAGTGCTGACCACAAAGTTGAAGCCTaGTTTTTCTTTCCACCCTCTCAAGACTTACCAAAAGGTCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: KYSIPACSADHKVEA*FFFPPSQDLPKGQS Trigger: TGACTGACCTTTTGGTAAGTCTTGAGAGGGTGGAAAGAAAAAGCAGGCTTCAACTTTGTGGTCAGCACTACATGCAGGTATTGAATACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR TCA 90 bp | GGAAGGAGATACAAAATAAAGTTCATAGATCAATTTACCTTGTACTaGTACTCTTCAGCACCATGGACTTACCAGGTCAGTTCACCAACT | + |
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Preference number: 1 (lower is better) Translates to: GRRYKIKFIDQFTLY*YSSAPWTYQVSSPT Trigger: AGTTGGTGAACTGACCTGGTAAGTCCATGGTGCTGAAGAGTATCAGTACAAGGTAAATTGATCTATGAACTTTATTTTGTATCTCCTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR GCA 90 bp | GCCGGCCAACATTTTAATCCACTGTTCAAAGAGACATTTATTACATaGAGAACCTGTCATTCATTTCACACATTAAGGTTTAACAGGTTA | + |
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Preference number: 1 (lower is better) Translates to: AGQHFNPLFKETFIT*RTCHSFHTLRFNRL Trigger: TAACCTGTTAAACCTTAATGTGTGAAATGAATGACAGGTTCTGCATGTAATAAATGTCTCTTTGAACAGTGGATTAAAATGTTGGCCGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR CAA 90 bp | GCTTGGGGGCCTGCAGGACCCAGTTCTAGGACAGTGAACAGAGGCTaGAGATGGCACGAAGAACAAGGGAGGCAGGAGCACCATCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: AWGPAGPSSRTVNRG*RWHEEQGRQEHHLL Trigger: CAGCAGATGGTGCTCCTGCCTCCCTTGTTCTTCGTGCCATCTCAAGCCTCTGTTCACTGTCCTAGAACTGGGTCCTGCAGGCCCCCAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| 3UTR-3UTR TCA 90 bp | GGCACACATCTGATCCAGACTCCAGATGCTCAGCAGCCCCAGGCTCTTCCACAGCAAATTTTAGTGGTATaGCTCATGCACTGGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: GTHLIQTPDAQQPQALPQQILVV*LMHWAE Trigger: CTCAGCCCAGTGCATGAGTCATACCACTAAAATTTG...CTGTGGAAGAGCCTGGGGCTGCTGAGCATCTGGAGTCTGGATCAGATGTGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR-3UTR GCA 90 bp | ACAAGCACCTTGAGAAGCTGTGGGGTGCAGAAGCTTGGGGGCCTGCAGGACCCAATCTGTGACTATAGCTaGTTACAGACAGCAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: TSTLRSCGVQKLGGLQDPICDYS*LQTAGR Trigger: TCTTCCTGCTGTCTGTAAGCAGCTATAGTCACAGAT...TGGGTCCTGCAGGCCCCCAAGCTTCTGCACCCCACAGCTTCTCAAGGTGCTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| 3UTR-3UTR TCA 90 bp | GTGAATACAAGCACCTTGAGAAGCTGTGGGGTGCAGAAGCTTGGGGGCCTGCAGTATCTGCAGTCTTTTTaGAATGCAAGGCACCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: VNTSTLRSCGVQKLGGLQYLQSF*NARHQQ Trigger: CTGCTGGTGCCTTGCATTTCAAAAAGACTGCAGATA...CTGCAGGCCCCCAAGCTTCTGCACCCCACAGCTTCTCAAGGTGCTTGTATTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| 3UTR-3UTR CCA 90 bp | GGCACACATCTGATCCAGACTCCAGATGCTCAGCAGCCCCAGGCTCTTCCACAGTTACGCACTATGGACTaGAAAGTGGCACTGATACAA | + |
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Preference number: 2 (lower is better) Translates to: GTHLIQTPDAQQPQALPQLRTMD*KVALIQ Trigger: TTGTATCAGTGCCACTTTCCAGTCCATAGTGCGTAA...CTGTGGAAGAGCCTGGGGCTGCTGAGCATCTGGAGTCTGGATCAGATGTGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR-3UTR TCA 90 bp | GCAGGAGCGGACATTCCAGCAAGAGTGACTGAGGAAAATGGAGCCAGTGATTCGACATTCCAGCAAGAGTaGCTGAGGAAAATGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: AGADIPARVTEENGASDSTFQQE*LRKMEP Trigger: TGGCTCCATTTTCCTCAGTCACTCTTGCTGGAATGT...CGAATCACTGGCTCCATTTTCCTCAGTCACTCTTGCTGGAATGTCCGCTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATACTCTTCAGCACCATGGACTTACCAGGTCAGTTCACCAACTCTGGGCTAACATTCCAGCAAGAGTaGCTGAGGAAAATGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LILFSTMDLPGQFTNSGLTFQQE*LRKMEP Trigger: TGGCTCCATTTTCCTCAGTCACTCTTGCTGGAATGT...TAGCCCAGAGTTGGTGAACTGACCTGGTAAGTCCATGGTGCTGAAGAGTATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR-3UTR TCA 90 bp | ATACAAACCACAGCACCTGCTCACTCACTCACTCACCATGGATCAGTGATGTCCACATTCCAGCAAGAGTaGCTGAGGAAAATGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: IQTTAPAHSLTHHGSVMSTFQQE*LRKMEP Trigger: TGGCTCCATTTTCCTCAGTCACTCTTGCTGGAATGT...GGACATCACTGATCCATGGTGAGTGAGTGAGTGAGCAGGTGCTGTGGTTTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR-3UTR TCA 90 bp | ACTGATACTCTTCAGCACCATGGACTTACCAGGTCAGTTCACCAACTCTGGGCTTATCTGCAGTCTTTTTaGAATGCAAGGCACCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TDTLQHHGLTRSVHQLWAYLQSF*NARHQQ Trigger: CTGCTGGTGCCTTGCATTTCAAAAAGACTGCAGATA...AGCCCAGAGTTGGTGAACTGACCTGGTAAGTCCATGGTGCTGAAGAGTATCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR-3UTR TCA 90 bp | GTGCTTACGCACTATGGACTGGAAAGTGGCACTGATACAAACCACAGCACCTGCACTCATGCACTGGGCTaGGTTTCTATCTGTACATTT | + |
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Preference number: 2 (lower is better) Translates to: VLTHYGLESGTDTNHSTCTHALG*VSICTF Trigger: AAATGTACAGATAGAAACTCAGCCCAGTGCATGAGT...GCAGGTGCTGTGGTTTGTATCAGTGCCACTTTCCAGTCCATAGTGCGTAAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCCACAGACACATAGTGGCACAAACCATGGCTGTACTGACCCTCTTTCTGTCGTTTGTCCTCTGTTaGTCAGAATACTTCCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: SSHRHIVAQTMAVLTLFLSFVLC*SEYFLF Trigger: GAAAAGGAAGTATTCTGAGCAACAGAGGACAAACGA...CAGAAAGAGGGTCAGTACAGCCATGGTTTGTGCCACTATGTGTCTGTGGCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGCTATAGTGAGCCTGACTACAGATGATTTCCTTGGAGCCATGCAGTTAAACGCAGTCTTTTTGAAATaGAAGGCACCAGCAGGAGCG | + |
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Preference number: 2 (lower is better) Translates to: LAIVSLTTDDFLGAMQLNAVFLK*KAPAGA Trigger: CGCTCCTGCTGGTGCCTTGCATTTCAAAAAGACTGC...GTTTAACTGCATGGCTCCAAGGAAATCATCTGTAGTCAGGCTCACTATAGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| 3UTR-3UTR GCA 90 bp | ATACAAACCACAGCACCTGCTCACTCACTCACTCACCATGGATCAGTGATGTCCATCTGTGACTATAGCTaGTTACAGACAGCAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: IQTTAPAHSLTHHGSVMSICDYS*LQTAGR Trigger: TCTTCCTGCTGTCTGTAAGCAGCTATAGTCACAGAT...GGACATCACTGATCCATGGTGAGTGAGTGAGTGAGCAGGTGCTGTGGTTTGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR-3UTR GCA 90 bp | CACATCCTGCCATGCTTGCAGGCCAGTTCACTAACTGGAGTGCCTACCAAATATTCGTTTGTCCTCTGTTaGTCAGAATACTTCCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: HILPCLQASSLTGVPTKYSFVLC*SEYFLF Trigger: GAAAAGGAAGTATTCTGAGCAACAGAGGACAAACGA...ATATTTGGTAGGCACTCCAGTTAGTGAACTGGCCTGCAAGCATGGCAGGATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR-3UTR GCA 90 bp | ACACTGATATTTCACGGTTCCCTTGCTATAGTGAGCCTGACTACAGATGATTTCGCAGTCTTTTTGAAATaGAAGGCACCAGCAGGAGCG | + |
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Preference number: 2 (lower is better) Translates to: TLIFHGSLAIVSLTTDDFAVFLK*KAPAGA Trigger: CGCTCCTGCTGGTGCCTTGCATTTCAAAAAGACTGC...GAAATCATCTGTAGTCAGGCTCACTATAGCAAGGGAACCGTGAAATATCAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGCCAGACTCTGTTGTCAGAGAGCCCGAGTCTTTATTACTATATTTTCACCAAATTTTAGTGGTATaGCTCATGCACTGGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: KKPDSVVREPESLLLYFHQILVV*LMHWAE Trigger: CTCAGCCCAGTGCATGAGTCATACCACTAAAATTTG...GTGAAAATATAGTAATAAAGACTCGGGCTCTCTGACAACAGAGTCTGGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR-3UTR GCA 90 bp | AATTTACCTTGTACTGATACTCTTCAGCACCATGGACTTACCAGGTCAGTTCACTCGTTTGTCCTCTGTTaGTCAGAATACTTCCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: NLPCTDTLQHHGLTRSVHSFVLC*SEYFLF Trigger: GAAAAGGAAGTATTCTGAGCAACAGAGGACAAACGA...GTGAACTGACCTGGTAAGTCCATGGTGCTGAAGAGTATCAGTACAAGGTAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR-3UTR GCA 90 bp | TTTATTACTATATTTTCACTTCCTCTACACTTACGCCTGATAAACGTCGATGTGACAAACCACAGCACCTaGTCACTCACTCACTCACCA | + |
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Preference number: 2 (lower is better) Translates to: FITIFSLPLHLRLINVDVTNHST*SLTHSP Trigger: TGGTGAGTGAGTGAGTGAGCAGGTGCTGTGGTTTGT...CACATCGACGTTTATCAGGCGTAAGTGTAGAGGAAGTGAAAATATAGTAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR GCA 72 bp | GGCACGAAGAACAAGGGAGGCAGGAGCACCATCTGCTaGTGTAGTACACGAGGGGCAAGATGGTTGCTCATC | + |
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Preference number: 3 (lower is better) Translates to: GTKNKGGRSTIC*CSTRGARWLLI Trigger: GATGAGCAACCATCTTGCCCCTCGTGTACTACAGCAGCAGATGGTGCTCCTGCCTCCCTTGTTCTTCGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| 3UTR CCA 72 bp | ACCAACTCTGGGCTAACCCGCCTGATACACACTAAGTaGGCGAGCTCCCTGGAGCAGCCACAGACACATAGT | + |
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Preference number: 3 (lower is better) Translates to: TNSGLTRLIHTK*ASSLEQPQTHS Trigger: ACTATGTGTCTGTGGCTGCTCCAGGGAGCTCGCCCACTTAGTGTGTATCAGGCGGGTTAGCCCAGAGTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR CCA 72 bp | TACAAGCACCTTGAGAAGCTGTGGGGTGCAGAAGCTTaGGGGCCTGCAGGACCCAGTTCTAGGACAGTGAAC | + |
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Preference number: 3 (lower is better) Translates to: YKHLEKLWGAEA*GPAGPSSRTVN Trigger: GTTCACTGTCCTAGAACTGGGTCCTGCAGGCCCCCAAGCTTCTGCACCCCACAGCTTCTCAAGGTGCTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| 3UTR CCA 72 bp | ACAAGGAAAGGTGAATACAAGCACCTTGAGAAGCTGTaGGGTGCAGAAGCTTGGGGGCCTGCAGGACCCAGT | + |
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Preference number: 3 (lower is better) Translates to: TRKGEYKHLEKL*GAEAWGPAGPS Trigger: ACTGGGTCCTGCAGGCCCCCAAGCTTCTGCACCCCACAGCTTCTCAAGGTGCTTGTATTCACCTTTCCTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| 3UTR TCA 72 bp | GCAAGGCACCAGCAGGAGCGGACATTCCAGCAAGAGTaGCTGAGGAAAATGGAGCCAGTGATTCGTTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: ARHQQERTFQQE*LRKMEPVIRLS Trigger: GGACAAACGAATCACTGGCTCCATTTTCCTCAGTCACTCTTGCTGGAATGTCCGCTCCTGCTGGTGCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| 3UTR TCA 72 bp | CGATGTGCTTACGCACTATGGACTGGAAAGTGGCACTaGTACAAACCACAGCACCTGCTCACTCACTCACTC | + |
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Preference number: 3 (lower is better) Translates to: RCAYALWTGKWH*YKPQHLLTHSL Trigger: GAGTGAGTGAGTGAGCAGGTGCTGTGGTTTGTATCAGTGCCACTTTCCAGTCCATAGTGCGTAAGCACATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR TCA 72 bp | TCAGCAGCCCCAGGCTCTTCCACAGTACTGAAGAGATaGCAGGGCACAGCATTATCTAACAAGACGACGACA | + |
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Preference number: 3 (lower is better) Translates to: SAAPGSSTVLKR*QGTALSNKTTT Trigger: TGTCGTCGTCTTGTTAGATAATGCTGTGCCCTGTCATCTCTTCAGTACTGTGGAAGAGCCTGGGGCTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR TCA 72 bp | CCAGATGCTCAGCAGCCCCAGGCTCTTCCACAGTACTaGAGAGATGACAGGGCACAGCATTATCTAACAAGA | + |
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Preference number: 3 (lower is better) Translates to: PDAQQPQALPQY*RDDRAQHYLTR Trigger: TCTTGTTAGATAATGCTGTGCCCTGTCATCTCTTCAGTACTGTGGAAGAGCCTGGGGCTGCTGAGCATCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR GCA 72 bp | CAAATATTAAGGCACACATCTGATCCAGACTCCAGATaGTCAGCAGCCCCAGGCTCTTCCACAGTACTGAAG | + |
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Preference number: 3 (lower is better) Translates to: QILRHTSDPDSR*SAAPGSSTVLK Trigger: CTTCAGTACTGTGGAAGAGCCTGGGGCTGCTGAGCATCTGGAGTCTGGATCAGATGTGTGCCTTAATATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR GCA 72 bp | AAGTCTTCCTCAAATATACAAAGCCACATCCTGCCATaGTTGCAGGCCAGTTCACTAACTGGAGTGCCTACC | + |
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Preference number: 3 (lower is better) Translates to: KSSSNIQSHILP*LQASSLTGVPT Trigger: GGTAGGCACTCCAGTTAGTGAACTGGCCTGCAAGCATGGCAGGATGTGGCTTTGTATATTTGAGGAAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR CCA 72 bp | CCACATCCTGCCATGCTTGCAGGCCAGTTCACTAACTaGAGTGCCTACCAAATATTAAGGCACACATCTGAT | + |
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Preference number: 3 (lower is better) Translates to: PHPAMLAGQFTN*SAYQILRHTSD Trigger: ATCAGATGTGTGCCTTAATATTTGGTAGGCACTCCAGTTAGTGAACTGGCCTGCAAGCATGGCAGGATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR-3UTR CAA 90 bp | CTTACGCACTATGGACTGGAAAGTGGCACTGATACAAACCACAGCACCTGCTCAATATCTGCAGTCTTTTaGAAATGCAAGGCACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LTHYGLESGTDTNHSTCSISAVF*KCKAPA Trigger: TGCTGGTGCCTTGCATTTCAAAAAGACTGCAGATAT...TGAGCAGGTGCTGTGGTTTGTATCAGTGCCACTTTCCAGTCCATAGTGCGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR-3UTR CAA 90 bp | CTGATACTCTTCAGCACCATGGACTTACCAGGTCAGTTCACCAACTCTGGGCTAATATCTGCAGTCTTTTaGAAATGCAAGGCACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LILFSTMDLPGQFTNSGLISAVF*KCKAPA Trigger: TGCTGGTGCCTTGCATTTCAAAAAGACTGCAGATAT...TAGCCCAGAGTTGGTGAACTGACCTGGTAAGTCCATGGTGCTGAAGAGTATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR-3UTR CAA 90 bp | ACAAAGCCACATCCTGCCATGCTTGCAGGCCAGTTCACTAACTGGAGTGCCTACGGTTTCAGATGCATTTaGGTATTGAATGTTTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: TKPHPAMLAGQFTNWSAYGFRCI*VLNVSR Trigger: CCTTGAAACATTCAATACCAAAATGCATCTGAAACC...GTAGGCACTCCAGTTAGTGAACTGGCCTGCAAGCATGGCAGGATGTGGCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR CCA 72 bp | TCTAGTGTGACATTTTTACTGAAAATCACCCTTGTGTaGCTGCGAGGAAGCCATTTCAGACAAGGAAAGGTG | + |
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Preference number: 3 (lower is better) Translates to: SSVTFLLKITLV*LRGSHFRQGKV Trigger: CACCTTTCCTTGTCTGAAATGGCTTCCTCGCAGCCACACAAGGGTGATTTTCAGTAAAAATGTCACACTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| 3UTR TCA 72 bp | CACCTAAGTTTCACACAGTCCCAAATTTTAGTGGTATaGCTCATGCACTGGGCTGAGTTTCTATCTGTACAT | + |
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Preference number: 3 (lower is better) Translates to: HLSFTQSQILVV*LMHWAEFLSVH Trigger: ATGTACAGATAGAAACTCAGCCCAGTGCATGAGTCATACCACTAAAATTTGGGACTGTGTGAAACTTAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| 3UTR-3UTR CAA 90 bp | CTGATATTTCACGGTTCCCTTGCTATAGTGAGCCTGACTACAGATGATTTCCTTTTCGTTTGTCCTCTGTaGCTCAGAATACTTCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: LIFHGSLAIVSLTTDDFLFVCPL*LRILPF Trigger: AAAAGGAAGTATTCTGAGCAACAGAGGACAAACGAA...AAGGAAATCATCTGTAGTCAGGCTCACTATAGCAAGGGAACCGTGAAATATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| 3UTR-3UTR CAA 90 bp | TTAACACTGATATTTCACGGTTCCCTTGCTATAGTGAGCCTGACTACAGATGATTTCGTTTGTCCTCTGTaGCTCAGAATACTTCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: LTLIFHGSLAIVSLTTDDFVCPL*LRILPF Trigger: AAAAGGAAGTATTCTGAGCAACAGAGGACAAACGAA...ATCATCTGTAGTCAGGCTCACTATAGCAAGGGAACCGTGAAATATCAGTGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| 3UTR-3UTR CAA 90 bp | AAAAAGCCAGACTCTGTTGTCAGAGAGCCCGAGTCTTTATTACTATATTTTCACTTCGTTTGTCCTCTGTaGCTCAGAATACTTCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KKPDSVVREPESLLLYFHFVCPL*LRILPF Trigger: AAAAGGAAGTATTCTGAGCAACAGAGGACAAACGAA...GTGAAAATATAGTAATAAAGACTCGGGCTCTCTGACAACAGAGTCTGGCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| 3UTR TCA 72 bp | AGCAGGAAGAACGTGACCTTAACTGGTAACTGTTATTaGCAAGTCTATGAATTAAGAGTACTAATCATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SRKNVTLTGNCY*QVYELRVLIIS Trigger: AGAAATGATTAGTACTCTTAATTCATAGACTTGTCAATAACAGTTACCAGTTAAGGTCACGTTCTTCCTGCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR TCA 90 bp | GGCACACATCTGATCCAGACTCCAGATGCTCAGCAGCCCCAGGCTCTTCCACAGGGGCTTGTCAGACAGTaGGGCCAGACCTCCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTHLIQTPDAQQPQALPQGLVRQ*GQTSHL Trigger: CAAGTGGGAGGTCTGGCCTCACTGTCTGACAAGCCC...CTGTGGAAGAGCCTGGGGCTGCTGAGCATCTGGAGTCTGGATCAGATGTGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR TCA 90 bp | ATACACACTAAGTGGGCGAGCTCCCTGGAGCAGCCACAGACACATAGTGGCACAGGGCTTGTCAGACAGTaGGGCCAGACCTCCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: IHTKWASSLEQPQTHSGTGLVRQ*GQTSHL Trigger: CAAGTGGGAGGTCTGGCCTCACTGTCTGACAAGCCC...TGTGCCACTATGTGTCTGTGGCTGCTCCAGGGAGCTCGCCCACTTAGTGTGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR TCA 90 bp | TCCCTGGAGCAGCCACAGACACATAGTGGCACAAACCATGGCTGTACTGACCCTGGGCTTGTCAGACAGTaGGGCCAGACCTCCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLEQPQTHSGTNHGCTDPGLVRQ*GQTSHL Trigger: CAAGTGGGAGGTCTGGCCTCACTGTCTGACAAGCCC...AGGGTCAGTACAGCCATGGTTTGTGCCACTATGTGTCTGTGGCTGCTCCAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
||
| 3UTR CAA 72 bp | CCTGCAGGACCCAGTTCTAGGACAGTGAACAGAGGCTaGAGATGGCACGAAGAACAAGGGAGGCAGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PAGPSSRTVNRG*RWHEEQGRQEH Trigger: GTGCTCCTGCCTCCCTTGTTCTTCGTGCCATCTCAAGCCTCTGTTCACTGTCCTAGAACTGGGTCCTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
||
| CDS-3UTR GCA 90 bp | GTGAATACAAGCACCTTGAGAAGCTGTGGGGTGCAGAAGCTTGGGGGCCTGCAGCCAGTGAGTGCAGGCTaGTTTTACTCTTGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNTSTLRSCGVQKLGGLQPVSAG*FYSWTL Trigger: CAGAGTCCAAGAGTAAAAGCAGCCTGCACTCACTGG...CTGCAGGCCCCCAAGCTTCTGCACCCCACAGCTTCTCAAGGTGCTTGTATTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
||
| CDS-3UTR CCA 90 bp | CCCTGGAGCAGCCACAGACACATAGTGGCACAAACCATGGCTGTACTGACCCTCGCAACATCACTGAGCTaGGAAACAGTCAGGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PWSSHRHIVAQTMAVLTLATSLS*ETVRSC Trigger: ACAAGACCTGACTGTTTCCCAGCTCAGTGATGTTGC...GAGGGTCAGTACAGCCATGGTTTGTGCCACTATGTGTCTGTGGCTGCTCCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| 3UTR CAA 72 bp | AGCCATTTCAGACAAGGAAAGGTGAATACAAGCACCTaGAGAAGCTGTGGGGTGCAGAAGCTTGGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHFRQGKVNTST*RSCGVQKLGGL Trigger: CAGGCCCCCAAGCTTCTGCACCCCACAGCTTCTCAAGGTGCTTGTATTCACCTTTCCTTGTCTGAAATGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGCCACAGACACATAGTGGCACAAACCATGGCTGTACTGACCCTCTTTCTGCTGGACAAAGGGCACTaGTGTCTCTGGCATCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSHRHIVAQTMAVLTLFLLDKGH*CLWHLQ Trigger: CTGTAGATGCCAGAGACAGCAGTGCCCTTTGTCCAG...CAGAAAGAGGGTCAGTACAGCCATGGTTTGTGCCACTATGTGTCTGTGGCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
||
| CDS-3UTR TCA 90 bp | CACATCCTGCCATGCTTGCAGGCCAGTTCACTAACTGGAGTGCCTACCAAATATTGTCTCATGGGCCAGTaGGTGCAGGCTGCTTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: HILPCLQASSLTGVPTKYCLMGQ*VQAAFT Trigger: AGTAAAAGCAGCCTGCACTCACTGGCCCATGAGACA...ATATTTGGTAGGCACTCCAGTTAGTGAACTGGCCTGCAAGCATGGCAGGATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR TCA 90 bp | ATACAAACCACAGCACCTGCTCACTCACTCACTCACCATGGATCAGTGATGTCCTGTCTCATGGGCCAGTaGGTGCAGGCTGCTTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: IQTTAPAHSLTHHGSVMSCLMGQ*VQAAFT Trigger: AGTAAAAGCAGCCTGCACTCACTGGCCCATGAGACA...GGACATCACTGATCCATGGTGAGTGAGTGAGTGAGCAGGTGCTGTGGTTTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR TCA 90 bp | CACGGTTCCCTTGCTATAGTGAGCCTGACTACAGATGATTTCCTTGGAGCCATGTGTCTCATGGGCCAGTaGGTGCAGGCTGCTTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: HGSLAIVSLTTDDFLGAMCLMGQ*VQAAFT Trigger: AGTAAAAGCAGCCTGCACTCACTGGCCCATGAGACA...CATGGCTCCAAGGAAATCATCTGTAGTCAGGCTCACTATAGCAAGGGAACCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGCCACAGACACATAGTGGCACAAACCATGGCTGTACTGACCCTCTTTCTGCCAGTGAGTGCAGGCTaGTTTTACTCTTGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSHRHIVAQTMAVLTLFLPVSAG*FYSWTL Trigger: CAGAGTCCAAGAGTAAAAGCAGCCTGCACTCACTGG...CAGAAAGAGGGTCAGTACAGCCATGGTTTGTGCCACTATGTGTCTGTGGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGCCACAGACACATAGTGGCACAAACCATGGCTGTACTGACCCTCTTTCTGGATCCTTCAGGACGGTaGTTCCCCTTTTACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSHRHIVAQTMAVLTLFLDPSGR*FPFYSL Trigger: CAGAGAGTAAAAGGGGAAGCACCGTCCTGAAGGATC...CAGAAAGAGGGTCAGTACAGCCATGGTTTGTGCCACTATGTGTCTGTGGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
||
| CDS-3UTR CCA 90 bp | GCCATGCTTGCAGGCCAGTTCACTAACTGGAGTGCCTACCAAATATTAAGGCACGCAATTCTTGTCTCATaGGCCAGTGAGTGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AMLAGQFTNWSAYQILRHAILVS*ASECRL Trigger: CAGCCTGCACTCACTGGCCCATGAGACAAGAATTGC...GTGCCTTAATATTTGGTAGGCACTCCAGTTAGTGAACTGGCCTGCAAGCATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR TCA 90 bp | GTGGCACTGATACAAACCACAGCACCTGCTCACTCACTCACTCACCATGGATCATACCTTCTGCTTCAATaGTGCCTAAATCCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VALIQTTAPAHSLTHHGSYLLLQ*CLNPGP Trigger: TGGCCCAGGATTTAGGCATCATTGAAGCAGAAGGTA...TGATCCATGGTGAGTGAGTGAGTGAGCAGGTGCTGTGGTTTGTATCAGTGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR GCA 90 bp | CTGATACTCTTCAGCACCATGGACTTACCAGGTCAGTTCACCAACTCTGGGCTATCATGGGCCAGTGAGTaGAGGCTGCTTTTACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LILFSTMDLPGQFTNSGLSWASE*RLLLLL Trigger: CAAGAGTAAAAGCAGCCTGCACTCACTGGCCCATGA...TAGCCCAGAGTTGGTGAACTGACCTGGTAAGTCCATGGTGCTGAAGAGTATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR GCA 90 bp | AATATCTGCAGTCTTTTTGAAATGCAAGGCACCAGCAGGAGCGGACATTCCAGCCTGGACAAAGGGCACTaGTGTCTCTGGCATCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: NICSLFEMQGTSRSGHSSLDKGH*CLWHLQ Trigger: CTGTAGATGCCAGAGACAGCAGTGCCCTTTGTCCAG...GCTGGAATGTCCGCTCCTGCTGGTGCCTTGCATTTCAAAAAGACTGCAGATATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
||
| CDS-3UTR CCA 90 bp | ATATTTCACGGTTCCCTTGCTATAGTGAGCCTGACTACAGATGATTTCCTTGGAGGGCACTGCTGTCTCTaGCATCTACAGCGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IFHGSLAIVSLTTDDFLGGHCCL*HLQRCC Trigger: GCAGCAGCGCTGTAGATGCCAGAGACAGCAGTGCCC...TCCAAGGAAATCATCTGTAGTCAGGCTCACTATAGCAAGGGAACCGTGAAATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCCACAGACACATAGTGGCACAAACCATGGCTGTACTGACCCTCTTTCTGGCAACATCACTGAGCTaGGAAACAGTCAGGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSHRHIVAQTMAVLTLFLATSLS*ETVRSC Trigger: ACAAGACCTGACTGTTTCCCAGCTCAGTGATGTTGC...CAGAAAGAGGGTCAGTACAGCCATGGTTTGTGCCACTATGTGTCTGTGGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR TCA 90 bp | ACGCACTATGGACTGGAAAGTGGCACTGATACAAACCACAGCACCTGCTCACTCTTGTCACCAGGCTTCTaGCCGATTGTCTTCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: THYGLESGTDTNHSTCSLLSPGF*PIVFFL Trigger: TAAGAAGAAGACAATCGGTCAGAAGCCTGGTGACAA...GAGTGAGCAGGTGCTGTGGTTTGTATCAGTGCCACTTTCCAGTCCATAGTGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
||
| CDS-3UTR CCA 90 bp | ACTGATACTCTTCAGCACCATGGACTTACCAGGTCAGTTCACCAACTCTGGGCTGGCTGCTTTTACTCTTaGACTCTGACAAGGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: TDTLQHHGLTRSVHQLWAGCFYS*TLTRRH Trigger: GTGTCTCCTTGTCAGAGTCCAAGAGTAAAAGCAGCC...AGCCCAGAGTTGGTGAACTGACCTGGTAAGTCCATGGTGCTGAAGAGTATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR CCA 90 bp | TACCTTGTACTGATACTCTTCAGCACCATGGACTTACCAGGTCAGTTCACCAACGCAATTCTTGTCTCATaGGCCAGTGAGTGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YLVLILFSTMDLPGQFTNAILVS*ASECRL Trigger: CAGCCTGCACTCACTGGCCCATGAGACAAGAATTGC...GTTGGTGAACTGACCTGGTAAGTCCATGGTGCTGAAGAGTATCAGTACAAGGTA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR CCA 90 bp | GTGCTTACGCACTATGGACTGGAAAGTGGCACTGATACAAACCACAGCACCTGCCGTCCTCTACTCCCATaGAAAGGTCTTCTTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: VLTHYGLESGTDTNHSTCRPLLP*KGLLQS Trigger: AGATTGAAGAAGACCTTTCCATGGGAGTAGAGGACG...GCAGGTGCTGTGGTTTGTATCAGTGCCACTTTCCAGTCCATAGTGCGTAAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR GCA 90 bp | TACCTTGTACTGATACTCTTCAGCACCATGGACTTACCAGGTCAGTTCACCAACTCATGGGCCAGTGAGTaGAGGCTGCTTTTACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLVLILFSTMDLPGQFTNSWASE*RLLLLL Trigger: CAAGAGTAAAAGCAGCCTGCACTCACTGGCCCATGA...GTTGGTGAACTGACCTGGTAAGTCCATGGTGCTGAAGAGTATCAGTACAAGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR CCA 90 bp | CCCTGGAGCAGCCACAGACACATAGTGGCACAAACCATGGCTGTACTGACCCTCGTTCTCATTGACCAATaGAGTTTTGTTCTCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PWSSHRHIVAQTMAVLTLVLIDQ*SFVLYF Trigger: AAAGTAGAGAACAAAACTCCATTGGTCAATGAGAAC...GAGGGTCAGTACAGCCATGGTTTGTGCCACTATGTGTCTGTGGCTGCTCCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR CCA 90 bp | CTTGCTATAGTGAGCCTGACTACAGATGATTTCCTTGGAGCCATGCAGTTAAACGCAATTCTTGTCTCATaGGCCAGTGAGTGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAIVSLTTDDFLGAMQLNAILVS*ASECRL Trigger: CAGCCTGCACTCACTGGCCCATGAGACAAGAATTGC...GTTTAACTGCATGGCTCCAAGGAAATCATCTGTAGTCAGGCTCACTATAGCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
||
| CDS-3UTR CCA 90 bp | AAAAAGCCAGACTCTGTTGTCAGAGAGCCCGAGTCTTTATTACTATATTTTCACGGGCACTGCTGTCTCTaGCATCTACAGCGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KKPDSVVREPESLLLYFHGHCCL*HLQRCC Trigger: GCAGCAGCGCTGTAGATGCCAGAGACAGCAGTGCCC...GTGAAAATATAGTAATAAAGACTCGGGCTCTCTGACAACAGAGTCTGGCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR CCA 90 bp | GCCATGCTTGCAGGCCAGTTCACTAACTGGAGTGCCTACCAAATATTAAGGCACCGTCCTCTACTCCCATaGAAAGGTCTTCTTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: AMLAGQFTNWSAYQILRHRPLLP*KGLLQS Trigger: AGATTGAAGAAGACCTTTCCATGGGAGTAGAGGACG...GTGCCTTAATATTTGGTAGGCACTCCAGTTAGTGAACTGGCCTGCAAGCATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR GCA 90 bp | ATATTTCACGGTTCCCTTGCTATAGTGAGCCTGACTACAGATGATTTCCTTGGACTGGACAAAGGGCACTaGTGTCTCTGGCATCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: IFHGSLAIVSLTTDDFLGLDKGH*CLWHLQ Trigger: CTGTAGATGCCAGAGACAGCAGTGCCCTTTGTCCAG...TCCAAGGAAATCATCTGTAGTCAGGCTCACTATAGCAAGGGAACCGTGAAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
||
| CDS-3UTR GCA 90 bp | CTTGCTATAGTGAGCCTGACTACAGATGATTTCCTTGGAGCCATGCAGTTAAACGATCCTTCAGGACGGTaGTTCCCCTTTTACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAIVSLTTDDFLGAMQLNDPSGR*FPFYSL Trigger: CAGAGAGTAAAAGGGGAAGCACCGTCCTGAAGGATC...GTTTAACTGCATGGCTCCAAGGAAATCATCTGTAGTCAGGCTCACTATAGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
||
| 3UTR CAA 72 bp | TCTTCCTCAAATATACAAAGCCACATCCTGCCATGCTaGCAGGCCAGTTCACTAACTGGAGTGCCTACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSNIQSHILPC*QASSLTGVPTK Trigger: TTTGGTAGGCACTCCAGTTAGTGAACTGGCCTGCAAGCATGGCAGGATGTGGCTTTGTATATTTGAGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR TCA 90 bp | TTAACACTGATATTTCACGGTTCCCTTGCTATAGTGAGCCTGACTACAGATGATACACTTGGCTCACTCTaGCTGGTCTCACTGCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLIFHGSLAIVSLTTDDTLGSL*LVSLLV Trigger: GACTAGCAGTGAGACCAGTCAGAGTGAGCCAAGTGT...ATCATCTGTAGTCAGGCTCACTATAGCAAGGGAACCGTGAAATATCAGTGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR TCA 90 bp | CTTGCTATAGTGAGCCTGACTACAGATGATTTCCTTGGAGCCATGCAGTTAAACTTTACTCTTGGACTCTaGCAAGGAGACACTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LAIVSLTTDDFLGAMQLNFTLGL*QGDTWL Trigger: GAGCCAAGTGTCTCCTTGTCAGAGTCCAAGAGTAAA...GTTTAACTGCATGGCTCCAAGGAAATCATCTGTAGTCAGGCTCACTATAGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
||
| CDS-3UTR GCA 90 bp | ATATTTCACGGTTCCCTTGCTATAGTGAGCCTGACTACAGATGATTTCCTTGGAGATCCTTCAGGACGGTaGTTCCCCTTTTACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFHGSLAIVSLTTDDFLGDPSGR*FPFYSL Trigger: CAGAGAGTAAAAGGGGAAGCACCGTCCTGAAGGATC...TCCAAGGAAATCATCTGTAGTCAGGCTCACTATAGCAAGGGAACCGTGAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
||
| CDS-3UTR CCA 90 bp | GCTATAGTGAGCCTGACTACAGATGATTTCCTTGGAGCCATGCAGTTAAACCAAGGCTGCTTTTACTCTTaGACTCTGACAAGGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: AIVSLTTDDFLGAMQLNQGCFYS*TLTRRH Trigger: GTGTCTCCTTGTCAGAGTCCAAGAGTAAAAGCAGCC...TTGGTTTAACTGCATGGCTCCAAGGAAATCATCTGTAGTCAGGCTCACTATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
||
| CDS-3UTR TCA 90 bp | AATATCTGCAGTCTTTTTGAAATGCAAGGCACCAGCAGGAGCGGACATTCCAGCCCTTTTTCTTTCTGTTaGCAGCGTCTAATCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NICSLFEMQGTSRSGHSSPFSFC*QRLITS Trigger: AGAAGTGATTAGACGCTGTCAACAGAAAGAAAAAGG...GCTGGAATGTCCGCTCCTGCTGGTGCCTTGCATTTCAAAAAGACTGCAGATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR TCA 90 bp | AATTTACCTTGTACTGATACTCTTCAGCACCATGGACTTACCAGGTCAGTTCACTTTACTCTTGGACTCTaGCAAGGAGACACTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLPCTDTLQHHGLTRSVHFTLGL*QGDTWL Trigger: GAGCCAAGTGTCTCCTTGTCAGAGTCCAAGAGTAAA...GTGAACTGACCTGGTAAGTCCATGGTGCTGAAGAGTATCAGTACAAGGTAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR GCA 90 bp | TTAACACTGATATTTCACGGTTCCCTTGCTATAGTGAGCCTGACTACAGATGATCCAGTGAGTGCAGGCTaGTTTTACTCTTGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTLIFHGSLAIVSLTTDDPVSAG*FYSWTL Trigger: CAGAGTCCAAGAGTAAAAGCAGCCTGCACTCACTGG...ATCATCTGTAGTCAGGCTCACTATAGCAAGGGAACCGTGAAATATCAGTGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCCAGACTCTGTTGTCAGAGAGCCCGAGTCTTTATTACTATATTTTCACTACCTTCTGCTTCAATaGTGCCTAAATCCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKPDSVVREPESLLLYFHYLLLQ*CLNPGP Trigger: TGGCCCAGGATTTAGGCATCATTGAAGCAGAAGGTA...GTGAAAATATAGTAATAAAGACTCGGGCTCTCTGACAACAGAGTCTGGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCCAGACTCTGTTGTCAGAGAGCCCGAGTCTTTATTACTATATTTTCACTTTACTCTTGGACTCTaGCAAGGAGACACTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KKPDSVVREPESLLLYFHFTLGL*QGDTWL Trigger: GAGCCAAGTGTCTCCTTGTCAGAGTCCAAGAGTAAA...GTGAAAATATAGTAATAAAGACTCGGGCTCTCTGACAACAGAGTCTGGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR CCA 90 bp | AAAAAGCCAGACTCTGTTGTCAGAGAGCCCGAGTCTTTATTACTATATTTTCACGGCTGCTTTTACTCTTaGACTCTGACAAGGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: KKPDSVVREPESLLLYFHGCFYS*TLTRRH Trigger: GTGTCTCCTTGTCAGAGTCCAAGAGTAAAAGCAGCC...GTGAAAATATAGTAATAAAGACTCGGGCTCTCTGACAACAGAGTCTGGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS-3UTR CCA 90 bp | ATATTTCACGGTTCCCTTGCTATAGTGAGCCTGACTACAGATGATTTCCTTGGATTGTCCTTTATACCTTaGTATCTTACTTGGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IFHGSLAIVSLTTDDFLGLSFIP*YLTWGG Trigger: TCCACCCCAAGTAAGATACCAAGGTATAAAGGACAA...TCCAAGGAAATCATCTGTAGTCAGGCTCACTATAGCAAGGGAACCGTGAAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| CDS-3UTR CCA 90 bp | ACACTGATATTTCACGGTTCCCTTGCTATAGTGAGCCTGACTACAGATGATTTCGTTCTCATTGACCAATaGAGTTTTGTTCTCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLIFHGSLAIVSLTTDDFVLIDQ*SFVLYF Trigger: AAAGTAGAGAACAAAACTCCATTGGTCAATGAGAAC...GAAATCATCTGTAGTCAGGCTCACTATAGCAAGGGAACCGTGAAATATCAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS-3UTR TCA 90 bp | TTTATTACTATATTTTCACTTCCTCTACACTTACGCCTGATAAACGTCGATGTGCCTTTTTCTTTCTGTTaGCAGCGTCTAATCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FITIFSLPLHLRLINVDVPFSFC*QRLITS Trigger: AGAAGTGATTAGACGCTGTCAACAGAAAGAAAAAGG...CACATCGACGTTTATCAGGCGTAAGTGTAGAGGAAGTGAAAATATAGTAATAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS GCA 90 bp | AGTTCAGCCTTGATGCGGTTCAGCACGCCGCTGTTCTCCAGCGTCTaGACCAGCAGGTCGCGCAGCTCCGTGTCTTCCTCGGCCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: SSALMRFSTPLFSSV*TSRSRSSVSSSATT Trigger: GGTGGTGGCCGAGGAAGACACGGAGCTGCGCGACCTGCTGGTGCAGACGCTGGAGAACAGCGGCGTGCTGAACCGCATCAAGGCTGAACT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS CCA 90 bp | GTTAGCGATGGGGCTCCGGCCAGGGAGCTGAGACCGCTCCTTAAGTaGGGCTTGTCAGACAGTGAGGCCAGACCTCCCACTTGCTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: VSDGAPARELRPLLK*GLSDSEARPPTCFR Trigger: TCGGAAGCAAGTGGGAGGTCTGGCCTCACTGTCTGACAAGCCCCACTTAAGGAGCGGTCTCAGCTCCCTGGCCGGAGCCCCATCGCTAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS-3UTR CAA 90 bp | CCCTGGAGCAGCCACAGACACATAGTGGCACAAACCATGGCTGTACTGACCCTCCTCCTTAAGTGGGGCTaGTCAGACAGTGAGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PWSSHRHIVAQTMAVLTLLLKWG*SDSEAR Trigger: TCTGGCCTCACTGTCTGACAAGCCCCACTTAAGGAG...GAGGGTCAGTACAGCCATGGTTTGTGCCACTATGTGTCTGTGGCTGCTCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS-3UTR CAA 90 bp | CCCTGGAGCAGCCACAGACACATAGTGGCACAAACCATGGCTGTACTGACCCTCCTGACAAGGAGACACTaGGCTCACTCTGACTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PWSSHRHIVAQTMAVLTLLTRRH*AHSDWS Trigger: AGACCAGTCAGAGTGAGCCAAGTGTCTCCTTGTCAG...GAGGGTCAGTACAGCCATGGTTTGTGCCACTATGTGTCTGTGGCTGCTCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS-3UTR CAA 90 bp | GGCACACATCTGATCCAGACTCCAGATGCTCAGCAGCCCCAGGCTCTTCCACAGACCTTGGTATCTTACTaGGGGTGGAGTTTGCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GTHLIQTPDAQQPQALPQTLVSY*GWSLHL Trigger: CAAGTGCAAACTCCACCCCAAGTAAGATACCAAGGT...CTGTGGAAGAGCCTGGGGCTGCTGAGCATCTGGAGTCTGGATCAGATGTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| CDS-3UTR CAA 90 bp | GGCACACATCTGATCCAGACTCCAGATGCTCAGCAGCCCCAGGCTCTTCCACAGTCGACCTTCAAGACCTaGAATTGTGCTAGTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTHLIQTPDAQQPQALPQSTFKT*NCASFR Trigger: CCTGAAACTAGCACAATTCAAGGTCTTGAAGGTCGA...CTGTGGAAGAGCCTGGGGCTGCTGAGCATCTGGAGTCTGGATCAGATGTGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS-3UTR CAA 90 bp | CCCTGGAGCAGCCACAGACACATAGTGGCACAAACCATGGCTGTACTGACCCTCAGGCTGCTTTTACTCTaGGACTCTGACAAGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: PWSSHRHIVAQTMAVLTLRLLLL*DSDKET Trigger: TGTCTCCTTGTCAGAGTCCAAGAGTAAAAGCAGCCT...GAGGGTCAGTACAGCCATGGTTTGTGCCACTATGTGTCTGTGGCTGCTCCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS GCA 90 bp | CCCCATCTGGACAAAGGGCACTGCTGTCTCTGGCATCTACAGCGCTaGTGCTTAAGAAAGATGCAATTCTTGTCTCATGGGCCAGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PHLDKGHCCLWHLQR*CLRKMQFLSHGPVS Trigger: ACTCACTGGCCCATGAGACAAGAATTGCATCTTTCTTAAGCAGCAGCGCTGTAGATGCCAGAGACAGCAGTGCCCTTTGTCCAGATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS-3UTR CAA 90 bp | ACAAGCACCTTGAGAAGCTGTGGGGTGCAGAAGCTTGGGGGCCTGCAGGACCCATCCTTTTTCTTTCTGTaGACAGCGTCTAATCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSTLRSCGVQKLGGLQDPSFFFL*TASNHF Trigger: GAAGTGATTAGACGCTGTCAACAGAAAGAAAAAGGA...TGGGTCCTGCAGGCCCCCAAGCTTCTGCACCCCACAGCTTCTCAAGGTGCTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| CDS-3UTR CAA 90 bp | GTGGCACTGATACAAACCACAGCACCTGCTCACTCACTCACTCACCATGGATCACTGACAAGGAGACACTaGGCTCACTCTGACTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VALIQTTAPAHSLTHHGSLTRRH*AHSDWS Trigger: AGACCAGTCAGAGTGAGCCAAGTGTCTCCTTGTCAG...TGATCCATGGTGAGTGAGTGAGTGAGCAGGTGCTGTGGTTTGTATCAGTGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS-3UTR CAA 90 bp | TCCCTGGAGCAGCCACAGACACATAGTGGCACAAACCATGGCTGTACTGACCCTAGGCTGCTTTTACTCTaGGACTCTGACAAGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SLEQPQTHSGTNHGCTDPRLLLL*DSDKET Trigger: TGTCTCCTTGTCAGAGTCCAAGAGTAAAAGCAGCCT...AGGGTCAGTACAGCCATGGTTTGTGCCACTATGTGTCTGTGGCTGCTCCAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS-3UTR CAA 90 bp | ACTGATACTCTTCAGCACCATGGACTTACCAGGTCAGTTCACCAACTCTGGGCTCTCCTTAAGTGGGGCTaGTCAGACAGTGAGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TDTLQHHGLTRSVHQLWALLKWG*SDSEAR Trigger: TCTGGCCTCACTGTCTGACAAGCCCCACTTAAGGAG...AGCCCAGAGTTGGTGAACTGACCTGGTAAGTCCATGGTGCTGAAGAGTATCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS GCA 90 bp | CATCTGGACAAAGGGCACTGCTGTCTCTGGCATCTACAGCGCTGCTaGTTAAGAAAGATGCAATTCTTGTCTCATGGGCCAGTGAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HLDKGHCCLWHLQRC*LRKMQFLSHGPVSA Trigger: TGCACTCACTGGCCCATGAGACAAGAATTGCATCTTTCTTAAGCAGCAGCGCTGTAGATGCCAGAGACAGCAGTGCCCTTTGTCCAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS CCA 90 bp | CTCCTTCCACATCATCCCCATCTGGACAAAGGGCACTGCTGTCTCTaGCATCTACAGCGCTGCTGCTTAAGAAAGATGCAATTCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLPHHPHLDKGHCCL*HLQRCCLRKMQFLS Trigger: AGACAAGAATTGCATCTTTCTTAAGCAGCAGCGCTGTAGATGCCAGAGACAGCAGTGCCCTTTGTCCAGATGGGGATGATGTGGAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS TCA 90 bp | CTGCTTTTACTCTTGGACTCTGACAAGGAGACACTTGGCTCACTCTaGCTGGTCTCACTGCTAGTCTTCTTACTTGGGGTGGAGTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLDSDKETLGSL*LVSLLVFLLGVEFA Trigger: TGCAAACTCCACCCCAAGTAAGAAGACTAGCAGTGAGACCAGTCAGAGTGAGCCAAGTGTCTCCTTGTCAGAGTCCAAGAGTAAAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024636.15 |
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| CDS GCA 90 bp | CTGCTGCTTAAGAAAGATGCAATTCTTGTCTCATGGGCCAGTGAGTaGAGGCTGCTTTTACTCTTGGACTCTGACAAGGAGACACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLKKDAILVSWASE*RLLLLLDSDKETLG Trigger: GCCAAGTGTCTCCTTGTCAGAGTCCAAGAGTAAAAGCAGCCTGCACTCACTGGCCCATGAGACAAGAATTGCATCTTTCTTAAGCAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS CCA 90 bp | GCATCTACAGCGCTGCTGCTTAAGAAAGATGCAATTCTTGTCTCATaGGCCAGTGAGTGCAGGCTGCTTTTACTCTTGGACTCTGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASTALLLKKDAILVS*ASECRLLLLLDSDK Trigger: CTTGTCAGAGTCCAAGAGTAAAAGCAGCCTGCACTCACTGGCCCATGAGACAAGAATTGCATCTTTCTTAAGCAGCAGCGCTGTAGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS-3UTR CAA 90 bp | AGCAGCCACAGACACATAGTGGCACAAACCATGGCTGTACTGACCCTCTTTCTGTACTTGGGGTGGAGTTaGCACTTGATTTTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSHRHIVAQTMAVLTLFLYLGWS*HLIFLQ Trigger: CTGAAGGAAAATCAAGTGCAAACTCCACCCCAAGTA...CAGAAAGAGGGTCAGTACAGCCATGGTTTGTGCCACTATGTGTCTGTGGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS-3UTR CAA 90 bp | CTTGCTATAGTGAGCCTGACTACAGATGATTTCCTTGGAGCCATGCAGTTAAACCTCCTTAAGTGGGGCTaGTCAGACAGTGAGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LAIVSLTTDDFLGAMQLNLLKWG*SDSEAR Trigger: TCTGGCCTCACTGTCTGACAAGCCCCACTTAAGGAG...GTTTAACTGCATGGCTCCAAGGAAATCATCTGTAGTCAGGCTCACTATAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS-3UTR CAA 90 bp | AATATCTGCAGTCTTTTTGAAATGCAAGGCACCAGCAGGAGCGGACATTCCAGCGGAAACAGTCAGGTCTaGTGTGAGGTCATCGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NICSLFEMQGTSRSGHSSGNSQV*CEVIEF Trigger: AAACTCGATGACCTCACACAAGACCTGACTGTTTCC...GCTGGAATGTCCGCTCCTGCTGGTGCCTTGCATTTCAAAAAGACTGCAGATATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS-3UTR CAA 90 bp | CACGGTTCCCTTGCTATAGTGAGCCTGACTACAGATGATTTCCTTGGAGCCATGCTTGTCCTTTATACCTaGGTATCTTACTTGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HGSLAIVSLTTDDFLGAMLVLYT*VSYLGW Trigger: CCACCCCAAGTAAGATACCAAGGTATAAAGGACAAG...CATGGCTCCAAGGAAATCATCTGTAGTCAGGCTCACTATAGCAAGGGAACCGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| CDS GCA 90 bp | TTAAGAAAGATGCAATTCTTGTCTCATGGGCCAGTGAGTGCAGGCTaGTTTTACTCTTGGACTCTGACAAGGAGACACTTGGCTCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRKMQFLSHGPVSAG*FYSWTLTRRHLAHS Trigger: AGAGTGAGCCAAGTGTCTCCTTGTCAGAGTCCAAGAGTAAAAGCAGCCTGCACTCACTGGCCCATGAGACAAGAATTGCATCTTTCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS-3UTR CAA 90 bp | CAGTTCACTAACTGGAGTGCCTACCAAATATTAAGGCACACATCTGATCCAGACGGAAACAGTCAGGTCTaGTGTGAGGTCATCGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QFTNWSAYQILRHTSDPDGNSQV*CEVIEF Trigger: AAACTCGATGACCTCACACAAGACCTGACTGTTTCC...GTCTGGATCAGATGTGTGCCTTAATATTTGGTAGGCACTCCAGTTAGTGAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS-3UTR CAA 90 bp | AATATCTGCAGTCTTTTTGAAATGCAAGGCACCAGCAGGAGCGGACATTCCAGCTCCTTTTTCTTTCTGTaGACAGCGTCTAATCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: NICSLFEMQGTSRSGHSSSFFFL*TASNHF Trigger: GAAGTGATTAGACGCTGTCAACAGAAAGAAAAAGGA...GCTGGAATGTCCGCTCCTGCTGGTGCCTTGCATTTCAAAAAGACTGCAGATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS-3UTR CAA 90 bp | AGCCTGACTACAGATGATTTCCTTGGAGCCATGCAGTTAAACCAAATTCAGAAGAGGCTGCTTTTACTCTaGGACTCTGACAAGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SLTTDDFLGAMQLNQIQKRLLLL*DSDKET Trigger: TGTCTCCTTGTCAGAGTCCAAGAGTAAAAGCAGCCT...CTTCTGAATTTGGTTTAACTGCATGGCTCCAAGGAAATCATCTGTAGTCAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS-3UTR CAA 90 bp | AAAAAGCCAGACTCTGTTGTCAGAGAGCCCGAGTCTTTATTACTATATTTTCACTCGACCTTCAAGACCTaGAATTGTGCTAGTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KKPDSVVREPESLLLYFHSTFKT*NCASFR Trigger: CCTGAAACTAGCACAATTCAAGGTCTTGAAGGTCGA...GTGAAAATATAGTAATAAAGACTCGGGCTCTCTGACAACAGAGTCTGGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS CCA 72 bp | GGGGCTCCGGCCAGGGAGCTGAGACCGCTCCTTAAGTaGGGCTTGTCAGACAGTGAGGCCAGACCTCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: GAPARELRPLLK*GLSDSEARPPT Trigger: AGTGGGAGGTCTGGCCTCACTGTCTGACAAGCCCCACTTAAGGAGCGGTCTCAGCTCCCTGGCCGGAGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS TCA 72 bp | CTGGATCTGTTAGCGATGGGGCTCCGGCCAGGGAGCTaGGACCGCTCCTTAAGTGGGGCTTGTCAGACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LDLLAMGLRPGS*DRSLSGACQTV Trigger: CACTGTCTGACAAGCCCCACTTAAGGAGCGGTCTCAGCTCCCTGGCCGGAGCCCCATCGCTAACAGATCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS GCA 72 bp | CTCCTTCCACATCATCCCCATCTGGACAAAGGGCACTaGTGTCTCTGGCATCTACAGCGCTGCTGCTTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLPHHPHLDKGH*CLWHLQRCCLR Trigger: TCTTAAGCAGCAGCGCTGTAGATGCCAGAGACAGCAGTGCCCTTTGTCCAGATGGGGATGATGTGGAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS TCA 72 bp | CTCTTGGACTCTGACAAGGAGACACTTGGCTCACTCTaGCTGGTCTCACTGCTAGTCTTCTTGTCACCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLDSDKETLGSL*LVSLLVFLSPG Trigger: GCCTGGTGACAAGAAGACTAGCAGTGAGACCAGTCAGAGTGAGCCAAGTGTCTCCTTGTCAGAGTCCAAGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| CDS CCA 72 bp | TCTCATGGGCCAGTGAGTGCAGGCTGCTTTTACTCTTaGACTCTGACAAGGAGACACTTGGCTCACTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SHGPVSAGCFYS*TLTRRHLAHSD Trigger: GTCAGAGTGAGCCAAGTGTCTCCTTGTCAGAGTCCAAGAGTAAAAGCAGCCTGCACTCACTGGCCCATGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS TCA 72 bp | CTCTTGGACTCTGACAAGGAGACACTTGGCTCACTCTaGCTGGTCTCACTGCTAGTCTTCTTACTTGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLDSDKETLGSL*LVSLLVFLLGV Trigger: CACCCCAAGTAAGAAGACTAGCAGTGAGACCAGTCAGAGTGAGCCAAGTGTCTCCTTGTCAGAGTCCAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024636.15 |
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| CDS CCA 72 bp | CATCATCCCCATCTGGACAAAGGGCACTGCTGTCTCTaGCATCTACAGCGCTGCTGCTTAAGAAAGATGCAA | + |
|
Preference number: 6 (lower is better) Translates to: HHPHLDKGHCCL*HLQRCCLRKMQ Trigger: TTGCATCTTTCTTAAGCAGCAGCGCTGTAGATGCCAGAGACAGCAGTGCCCTTTGTCCAGATGGGGATGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS GCA 72 bp | GACAAAGGGCACTGCTGTCTCTGGCATCTACAGCGCTaGTGCTTAAGAAAGATGCAATTCTTGTCTCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: DKGHCCLWHLQR*CLRKMQFLSHG Trigger: CCCATGAGACAAGAATTGCATCTTTCTTAAGCAGCAGCGCTGTAGATGCCAGAGACAGCAGTGCCCTTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS CCA 72 bp | GCGCTGCTGCTTAAGAAAGATGCAATTCTTGTCTCATaGGCCAGTGAGTGCAGGCTGCTTTTACTCTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ALLLKKDAILVS*ASECRLLLLLD Trigger: GTCCAAGAGTAAAAGCAGCCTGCACTCACTGGCCCATGAGACAAGAATTGCATCTTTCTTAAGCAGCAGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS CAA 72 bp | GTCAGCAACATCACTGAGCTGGGAAACAGTCAGGTCTaGTGTGAGGTCATCGAGTTTATCACTGGTGTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VSNITELGNSQV*CEVIEFITGVP Trigger: GGGAACACCAGTGATAAACTCGATGACCTCACACAAGACCTGACTGTTTCCCAGCTCAGTGATGTTGCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS CAA 90 bp | TTCCAGATAGTCAGCAACATCACTGAGCTGGGAAACAGTCAGGTCTaGTGTGAGGTCATCGAGTTTATCACTGGTGTTCCCGTCCTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: FQIVSNITELGNSQV*CEVIEFITGVPVLY Trigger: GTAGAGGACGGGAACACCAGTGATAAACTCGATGACCTCACACAAGACCTGACTGTTTCCCAGCTCAGTGATGTTGCTGACTATCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS GCA 72 bp | ATGCAATTCTTGTCTCATGGGCCAGTGAGTGCAGGCTaGTTTTACTCTTGGACTCTGACAAGGAGACACTTG | + |
|
Preference number: 6 (lower is better) Translates to: MQFLSHGPVSAG*FYSWTLTRRHL Trigger: CAAGTGTCTCCTTGTCAGAGTCCAAGAGTAAAAGCAGCCTGCACTCACTGGCCCATGAGACAAGAATTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS CAA 72 bp | GGGTGGAGTTTGCACTTGATTTTCCTTCAGGTGACTTaGATGGAGGATGTCCATCGGATAGATCCAGTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GWSLHLIFLQVT*MEDVHRIDPVH Trigger: GTGCACTGGATCTATCCGATGGACATCCTCCATCAAAGTCACCTGAAGGAAAATCAAGTGCAAACTCCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS CAA 90 bp | TCTTACTTGGGGTGGAGTTTGCACTTGATTTTCCTTCAGGTGACTTaGATGGAGGATGTCCATCGGATAGATCCAGTGCACCTTCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: SYLGWSLHLIFLQVT*MEDVHRIDPVHLPH Trigger: GTGTGGAAGGTGCACTGGATCTATCCGATGGACATCCTCCATCAAAGTCACCTGAAGGAAAATCAAGTGCAAACTCCACCCCAAGTAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
||
| CDS TCA 72 bp | ATAATAAGGGTCCACCCACAGTACCTTCTGCTTCAATaGTGCCTAAATCCTGGGCCAAGTTCTCTCGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: IIRVHPQYLLLQ*CLNPGPSSLDL Trigger: AAGGTCGAGAGAACTTGGCCCAGGATTTAGGCATCATTGAAGCAGAAGGTACTGTGGGTGGACCCTTATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 |
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| CDS GCA 72 bp | AAGAAAGATGCAATTCTTGTCTCATGGGCCAGTGAGTaGAGGCTGCTTTTACTCTTGGACTCTGACAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: KKDAILVSWASE*RLLLLLDSDKE Trigger: CTCCTTGTCAGAGTCCAAGAGTAAAAGCAGCCTGCACTCACTGGCCCATGAGACAAGAATTGCATCTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024636.15 ENSMUST00000097419.10 ENSMUST00000161898.2 |
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| CDS TCA 72 bp | CTGGTCTCACTGCTAGTCTTCTTGTCACCAGGCTTCTaGCCGATTGTCTTCTTCTTACCTTGTCCTTTATAC | + |
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Preference number: 6 (lower is better) Translates to: LVSLLVFLSPGF*PIVFFLPCPLY Trigger: GTATAAAGGACAAGGTAAGAAGAAGACAATCGGTCAGAAGCCTGGTGACAAGAAGACTAGCAGTGAGACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| CDS CAA 90 bp | AGTCTTCTTGTCACCAGGCTTCTGACCGATTGTCTTCTTCTTACCTaGTCCTTTATACCTTGGTATCTTACTTGGGGTGGAGTTTGCACT | + |
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Preference number: 6 (lower is better) Translates to: SLLVTRLLTDCLLLT*SFIPWYLTWGGVCT Trigger: AGTGCAAACTCCACCCCAAGTAAGATACCAAGGTATAAAGGACAAGGTAAGAAGAAGACAATCGGTCAGAAGCCTGGTGACAAGAAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| CDS CAA 90 bp | CTTGTCCTTTATACCTTGGTATCTTACTTGGGGTGGAGTTTGCACTaGATTTTCCTTCAGGTGACTTTGATGGAGGATGTCCATCGGATA | + |
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Preference number: 6 (lower is better) Translates to: LVLYTLVSYLGWSLH*IFLQVTLMEDVHRI Trigger: TATCCGATGGACATCCTCCATCAAAGTCACCTGAAGGAAAATCAAGTGCAAACTCCACCCCAAGTAAGATACCAAGGTATAAAGGACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| CDS CAA 90 bp | CAGGCTTCTGACCGATTGTCTTCTTCTTACCTTGTCCTTTATACCTaGGTATCTTACTTGGGGTGGAGTTTGCACTTGATTTTCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: QASDRLSSSYLVLYT*VSYLGWSLHLIFLQ Trigger: CTGAAGGAAAATCAAGTGCAAACTCCACCCCAAGTAAGATACCAAGGTATAAAGGACAAGGTAAGAAGAAGACAATCGGTCAGAAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| CDS CAA 72 bp | TATACCTTGGTATCTTACTTGGGGTGGAGTTTGCACTaGATTTTCCTTCAGGTGACTTTGATGGAGGATGTC | + |
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Preference number: 6 (lower is better) Translates to: YTLVSYLGWSLH*IFLQVTLMEDV Trigger: GACATCCTCCATCAAAGTCACCTGAAGGAAAATCAAGTGCAAACTCCACCCCAAGTAAGATACCAAGGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| CDS CAA 72 bp | GTCCTTTATACCTTGGTATCTTACTTGGGGTGGAGTTaGCACTTGATTTTCCTTCAGGTGACTTTGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: VLYTLVSYLGWS*HLIFLQVTLME Trigger: CTCCATCAAAGTCACCTGAAGGAAAATCAAGTGCAAACTCCACCCCAAGTAAGATACCAAGGTATAAAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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| CDS CCA 72 bp | TACCTTGTCCTTTATACCTTGGTATCTTACTTGGGGTaGAGTTTGCACTTGATTTTCCTTCAGGTGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: YLVLYTLVSYLG*SLHLIFLQVTL Trigger: CAAAGTCACCTGAAGGAAAATCAAGTGCAAACTCCACCCCAAGTAAGATACCAAGGTATAAAGGACAAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097419.10 |
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