Pregenerated sensors for CEP41 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029790Ensembl transcript IDs: ENSMUST00000031810.15, ENSMUST00000115130.3, ENSMUST00000115131.8, ENSMUST00000133373.8, ENSMUST00000140211.8, ENSMUST00000169422.8
Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGCGGGGGCTCGAGTGGCTGGCAGGACAGCTGGTGGGCAGGTTCTaGCCACCGCGGCAAGCAGCCACCTTCGAGTCTTTTCCAGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: VRGLEWLAGQLVGRF*PPRQAATFESFPAE Trigger: CTCTGCTGGAAAAGACTCGAAGGTGGCTGCTTGCCGCGGTGGCCAGAACCTGCCCACCAGCTGTCCTGCCAGCCACTCGAGCCCCCGCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR TCA 90 bp | ACACAGGCCTTCACTTCCAGGGTTTGCCTTGCAGGTGACCGCTGGTaGGCGTGCGGGGGCTCGAGTGGCTGGCAGGACAGCTGGTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: TQAFTSRVCLAGDRW*ACGGSSGWQDSWWA Trigger: TGCCCACCAGCTGTCCTGCCAGCCACTCGAGCCCCCGCACGCTCACCAGCGGTCACCTGCAAGGCAAACCCTGGAAGTGAAGGCCTGTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR CCA 90 bp | TTGGGGCCACGTCGTTTCCGGACAGAACCAAAAGGGAGGGCCTGCTaGCAAGAGGCTGGCAGGGAACCAGTGACCAGTCCTTCTGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: LGPRRFRTEPKGRAC*QEAGREPVTSPSGN Trigger: GTTCCCAGAAGGACTGGTCACTGGTTCCCTGCCAGCCTCTTGCCAGCAGGCCCTCCCTTTTGGTTCTGTCCGGAAACGACGTGGCCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR CCA 90 bp | AGAGTGGAGCGGCTGGAGTCCCCTGCTCCCGTGCTGTTGATGAACTaGACAGGGCTGGGTGACTGTTCCTCAGGGCTCCCTTTCCCATTT | + |
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Preference number: 1 (lower is better) Translates to: RVERLESPAPVLLMN*TGLGDCSSGLPFPF Trigger: AAATGGGAAAGGGAGCCCTGAGGAACAGTCACCCAGCCCTGTCCAGTTCATCAACAGCACGGGAGCAGGGGACTCCAGCCGCTCCACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR TCA 90 bp | CCAAGCCTCTGGTTTTTGTGGTCATCTGTCAGACTCCTTCCTGAGTaGAGGGAGTGGAGCTGCAGACGGACAAGTGGGCCTGGTCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: PSLWFLWSSVRLLPE*REWSCRRTSGPGPA Trigger: GGCTGGACCAGGCCCACTTGTCCGTCTGCAGCTCCACTCCCTTCACTCAGGAAGGAGTCTGACAGATGACCACAAAAACCAGAGGCTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR TCA 90 bp | CCTGCCAAGCCTCTGGTTTTTGTGGTCATCTGTCAGACTCCTTCCTaGGTGAAGGGAGTGGAGCTGCAGACGGACAAGTGGGCCTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: PAKPLVFVVICQTPS*VKGVELQTDKWAWS Trigger: GGACCAGGCCCACTTGTCCGTCTGCAGCTCCACTCCCTTCACTCAGGAAGGAGTCTGACAGATGACCACAAAAACCAGAGGCTTGGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR TCA 90 bp | GGAGTCCCCTGCTCCCGTGCTGTTGATGAACTGGACAGGGCTGGGTaGCTGTTCCTCAGGGCTCCCTTTCCCATTTGTCTTGGCAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: GVPCSRAVDELDRAG*LFLRAPFPICLGSN Trigger: ATTGCTGCCAAGACAAATGGGAAAGGGAGCCCTGAGGAACAGTCACCCAGCCCTGTCCAGTTCATCAACAGCACGGGAGCAGGGGACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR CCA 90 bp | GTGAGTGAGGAAGTGCCGAATGAAGACAGTGATTTGCAAGGAGCCTaGGGAAAGGGGCAGGCCATGGAGCAGAGGCAGCTTCCCTTCACC | + |
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Preference number: 1 (lower is better) Translates to: VSEEVPNEDSDLQGA*GKGQAMEQRQLPFT Trigger: GGTGAAGGGAAGCTGCCTCTGCTCCATGGCCTGCCCCTTTCCCCAGGCTCCTTGCAAATCACTGTCTTCATTCGGCACTTCCTCACTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115130.3 |
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| 3UTR CCA 90 bp | CCGCGGCAAGCAGCCACCTTCGAGTCTTTTCCAGCAGAGTTATTCTaGTTCAGTCGGCTAGGGTTGTCTGCTGGTCCCTGGTCCTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: PRQAATFESFPAELF*FSRLGLSAGPWSSS Trigger: GGAAGAGGACCAGGGACCAGCAGACAACCCTAGCCGACTGAACCAGAATAACTCTGCTGGAAAAGACTCGAAGGTGGCTGCTTGCCGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR GCA 90 bp | AGACTCAGTGTGAGGACTGTGGGCTGCAGAAACCAAGAACTCATCTaGACCTGTGGGGACAGCGGCCAATTCCAGGCCCACCTGGAGAAT | + |
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Preference number: 1 (lower is better) Translates to: RLSVRTVGCRNQELI*TCGDSGQFQAHLEN Trigger: ATTCTCCAGGTGGGCCTGGAATTGGCCGCTGTCCCCACAGGTGCAGATGAGTTCTTGGTTTCTGCAGCCCACAGTCCTCACACTGAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR TCA 90 bp | ACCCGCAGGTTGCTGGGGTCTTCCTGTACTGGGCCCTCCTTCTGGTaGGGAAAGCTGAACACACATCTTTGTGGTCCCAGGAAACCATTT | + |
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Preference number: 1 (lower is better) Translates to: TRRLLGSSCTGPSFW*GKLNTHLCGPRKPF Trigger: AAATGGTTTCCTGGGACCACAAAGATGTGTGTTCAGCTTTCCTCACCAGAAGGAGGGCCCAGTACAGGAAGACCCCAGCAACCTGCGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR CCA 90 bp | ATGAAGAGGTTTTCAAACCCACGCTCACACATGGTGGTGGCCGCCTaGCTGGCCAGCCTCTCGTCCTCGTCGTATAAGATGATGATCTTG | + |
|
Preference number: 1 (lower is better) Translates to: MKRFSNPRSHMVVAA*LASLSSSSYKMMIL Trigger: CAAGATCATCATCTTATACGACGAGGACGAGAGGCTGGCCAGCCAGGCGGCCACCACCATGTGTGAGCGTGGGTTTGAAAACCTCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR TCA 90 bp | TGCTGGGGTCTTCCTGTACTGGGCCCTCCTTCTGGTGAGGAAAGCTaGACACACATCTTTGTGGTCCCAGGAAACCATTTAAGGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: CWGLPVLGPPSGEES*THIFVVPGNHLRRG Trigger: TCCTCTCCTTAAATGGTTTCCTGGGACCACAAAGATGTGTGTTCAGCTTTCCTCACCAGAAGGAGGGCCCAGTACAGGAAGACCCCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR TCA 90 bp | ACAGTGTTGGAGAGGAACACTGAGTGCAGAAGGGGTCGGCTCTCTTaGAGTTTGAGACTCTTGCCAACAGGGCAAAGAGCTATGGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: TVLERNTECRRGRLS*SLRLLPTGQRAMEK Trigger: TTTCTCCATAGCTCTTTGCCCTGTTGGCAAGAGTCTCAAACTTCAAGAGAGCCGACCCCTTCTGCACTCAGTGTTCCTCTCCAACACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
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| 3UTR CCA 90 bp | CTAGCAGCAGGAAGGGACAGTCCGGATAAGGCTTGTCTTTGCCATTaGGTTCTTCTTTCTTTACGAGCCCTTTGTCTACATCCAGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: LAAGRDSPDKACLCH*VLLSLRALCLHPVP Trigger: GGGAACTGGATGTAGACAAAGGGCTCGTAAAGAAAGAAGAACCCAATGGCAAAGACAAGCCTTATCCGGACTGTCCCTTCCTGCTGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR TCA 90 bp | GCTCCCTTTCCCATTTGTCTTGGCAGCAATTTCAGCATCAGCCTCTaGAGTTGCAGAATCATTGTCTTGAATGGGTGTGGTGGCTCACAG | + |
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Preference number: 1 (lower is better) Translates to: APFPICLGSNFSISL*SCRIIVLNGCGGSQ Trigger: CTGTGAGCCACCACACCCATTCAAGACAATGATTCTGCAACTTCAGAGGCTGATGCTGAAATTGCTGCCAAGACAAATGGGAAAGGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR CCA 90 bp | CATCAGCCTCTGAAGTTGCAGAATCATTGTCTTGAATGGGTGTGGTaGCTCACAGCCATAGTCTTAGCATTTCAGAGGATGAGACAGGAG | + |
|
Preference number: 1 (lower is better) Translates to: HQPLKLQNHCLEWVW*LTAIVLAFQRMRQE Trigger: CTCCTGTCTCATCCTCTGAAATGCTAAGACTATGGCTGTGAGCCACCACACCCATTCAAGACAATGATTCTGCAACTTCAGAGGCTGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR CCA 90 bp | CAGCATCAGCCTCTGAAGTTGCAGAATCATTGTCTTGAATGGGTGTaGTGGCTCACAGCCATAGTCTTAGCATTTCAGAGGATGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: QHQPLKLQNHCLEWV*WLTAIVLAFQRMRQ Trigger: CTGTCTCATCCTCTGAAATGCTAAGACTATGGCTGTGAGCCACCACACCCATTCAAGACAATGATTCTGCAACTTCAGAGGCTGATGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR TCA 90 bp | AGTAGTACGTGCAAATCTGGTCCACTACAAACGTTTGCATCTGTGTaGGTGAGGAAGTGCCGAATGAAGACAGTGATTTGCAAGGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: SSTCKSGPLQTFASV*VRKCRMKTVICKEP Trigger: AGGCTCCTTGCAAATCACTGTCTTCATTCGGCACTTCCTCACTCACACAGATGCAAACGTTTGTAGTGGACCAGATTTGCACGTACTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115130.3 |
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| 3UTR TCA 90 bp | GCAGCAATTTCAGCATCAGCCTCTGAAGTTGCAGAATCATTGTCTTaGATGGGTGTGGTGGCTCACAGCCATAGTCTTAGCATTTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: AAISASASEVAESLS*MGVVAHSHSLSISE Trigger: CTCTGAAATGCTAAGACTATGGCTGTGAGCCACCACACCCATTCAAGACAATGATTCTGCAACTTCAGAGGCTGATGCTGAAATTGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR CCA 90 bp | CTAATGAAGAAACTGGTAAAGTGGAACGTTAGGAAGCAACAGTGTTaGAGAGGAACACTGAGTGCAGAAGGGGTCGGCTCTCTTGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: LMKKLVKWNVRKQQC*RGTLSAEGVGSLEV Trigger: AACTTCAAGAGAGCCGACCCCTTCTGCACTCAGTGTTCCTCTCCAACACTGTTGCTTCCTAACGTTCCACTTTACCAGTTTCTTCATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
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| 3UTR CCA 90 bp | CAATTTCAGCATCAGCCTCTGAAGTTGCAGAATCATTGTCTTGAATaGGTGTGGTGGCTCACAGCCATAGTCTTAGCATTTCAGAGGATG | + |
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Preference number: 1 (lower is better) Translates to: QFQHQPLKLQNHCLE*VWWLTAIVLAFQRM Trigger: CATCCTCTGAAATGCTAAGACTATGGCTGTGAGCCACCACACCCATTCAAGACAATGATTCTGCAACTTCAGAGGCTGATGCTGAAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR CCA 90 bp | GAATGTCATTTGAATAGGGGTTCATTGTCCTGGATAGAGTTGCAATaGGGTAACTGTAAGCCCCGACAATGTGACACTGCTGATAAGAAT | + |
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Preference number: 1 (lower is better) Translates to: ECHLNRGSLSWIELQ*GNCKPRQCDTADKN Trigger: ATTCTTATCAGCAGTGTCACATTGTCGGGGCTTACAGTTACCCCATTGCAACTCTATCCAGGACAATGAACCCCTATTCAAATGACATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR GCA 90 bp | TACGTATATACAGTCATTTCCAACACTAACATCCATTGGTGGGAATaGAGATCAGGAACAGACAGAGACTTCCAAAACAGAATTGGGTGT | + |
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Preference number: 1 (lower is better) Translates to: YVYTVISNTNIHWWE*RSGTDRDFQNRIGC Trigger: ACACCCAATTCTGTTTTGGAAGTCTCTGTCTGTTCCTGATCTGCATTCCCACCAATGGATGTTAGTGTTGGAAATGACTGTATATACGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
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| 3UTR TCA 90 bp | TCATTAAAGCTATGTGTACGTTGGCTGAATTTTATACACGATTCTTaGATCTTGTGGAAATTTGGGCACGGCCTGACATCTGAACAATGT | + |
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Preference number: 1 (lower is better) Translates to: SLKLCVRWLNFIHDS*ILWKFGHGLTSEQC Trigger: ACATTGTTCAGATGTCAGGCCGTGCCCAAATTTCCACAAGATTCAAGAATCGTGTATAAAATTCAGCCAACGTACACATAGCTTTAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGCAGTGGCAGGACAGCTGGTaGGCAGGTTCTGGCCACCGC | + |
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Preference number: 2 (lower is better) Translates to: SLQPPERAKTQCEDCGLQWQDSW*AGSGHR Trigger: GCGGTGGCCAGAACCTGCCCACCAGCTGTCCTGCCA...CTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGCCAAGTTGGGAGCGCTaGGGGTTCCGAAAGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: QSLQPPERAKTQCEDCGLPSWER*GFRKEG Trigger: CCCCTCCTTTCGGAACCCTCAGCGCTCCCAACTTGG...CAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGCAGAGACCCGCAGGTTGCTaGGGTCTTCCTGTACTGGGC | + |
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Preference number: 2 (lower is better) Translates to: SLQPPERAKTQCEDCGLQRPAGC*GLPVLG Trigger: GCCCAGTACAGGAAGACCCCAGCAACCTGCGGGTCT...CTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGCAGGCTCGTCCTTCCCTCTaGCTTCATGGGCCTCATCCT | + |
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Preference number: 2 (lower is better) Translates to: SLQPPERAKTQCEDCGLQARPSL*LHGPHP Trigger: AGGATGAGGCCCATGAAGTCAGAGGGAAGGACGAGC...CTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGTGTGAGGACTGTGGGCTGCAGAAACCAAGAACTCATCTGCACCTGTGGGCAGAGTGGAGCGGCTaGAGTCCCCTGCTCCCGTGC | + |
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Preference number: 2 (lower is better) Translates to: TQCEDCGLQKPRTHLHLWAEWSG*SPLLPC Trigger: GCACGGGAGCAGGGGACTCCAGCCGCTCCACTCTGC...CCACAGGTGCAGATGAGTTCTTGGTTTCTGCAGCCCACAGTCCTCACACTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTCGTCCTTCCCTCTGACTTCATGGGCCTCATCCTTACCTGAGGTCTTTTGTATGGTGGTGGCCGCCTaGCTGGCCAGCCTCTCGTCC | + |
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Preference number: 2 (lower is better) Translates to: GSSFPLTSWASSLPEVFCMVVAA*LASLSS Trigger: GGACGAGAGGCTGGCCAGCCAGGCGGCCACCACCAT...ACAAAAGACCTCAGGTAAGGATGAGGCCCATGAAGTCAGAGGGAAGGACGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGCAGAAACCAAGAACTCATCTaGACCTGTGGGGACAGCGGC | + |
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Preference number: 2 (lower is better) Translates to: ACSLQSELRLSVRTVGCRNQELI*TCGDSG Trigger: GCCGCTGTCCCCACAGGTGCAGATGAGTTCTTGGTT...TCTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTCCAGCAGAGTTATTCTGGTTCAGTCGGCTAGGGTTGTCTGCTGGTCCCTGGCTCACACATGGTGGTaGCCGCCTGGCTGGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: FSSRVILVQSARVVCWSLAHTWW*PPGWPA Trigger: GGCTGGCCAGCCAGGCGGCCACCACCATGTGTGAGC...CAGGGACCAGCAGACAACCCTAGCCGACTGAACCAGAATAACTCTGCTGGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTCGTCCTTCCCTCTGACTTCATGGGCCTCATCCTTACCTGAGGTCTTTTGTCCAAGTTGGGAGCGCTaGGGGTTCCGAAAGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GSSFPLTSWASSLPEVFCPSWER*GFRKEG Trigger: CCCCTCCTTTCGGAACCCTCAGCGCTCCCAACTTGG...ACAAAAGACCTCAGGTAAGGATGAGGCCCATGAAGTCAGAGGGAAGGACGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGGCCAGCCTCTCGTCCTCGTCGTATAAGATGATGATCTTGCCGTGGGCGAACCAAGAACTCATCTaGACCTGTGGGGACAGCGGC | + |
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Preference number: 2 (lower is better) Translates to: WLASLSSSSYKMMILPWANQELI*TCGDSG Trigger: GCCGCTGTCCCCACAGGTGCAGATGAGTTCTTGGTT...CGCCCACGGCAAGATCATCATCTTATACGACGAGGACGAGAGGCTGGCCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR CAA 90 bp | ATTTATTTGAGTAAACAACACAGGCCTTCACTTCCAGGGTTTGCCTaGCAGGTGACCGCTGGTGAGCGTGCGGGGGCTCGAGTGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: IYLSKQHRPSLPGFA*QVTAGERAGARVAG Trigger: GCCAGCCACTCGAGCCCCCGCACGCTCACCAGCGGTCACCTGCAAGGCAAACCCTGGAAGTGAAGGCCTGTGTTGTTTACTCAAATAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCAAGATGCACCCATGCTCACAGACCACCCCTCAGCTTCAAATGCCCAGCAGAGACTCCTTCCTGAGTaGAGGGAGTGGAGCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: QQDAPMLTDHPSASNAQQRLLPE*REWSCR Trigger: TCTGCAGCTCCACTCCCTTCACTCAGGAAGGAGTCT...CTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAGCATGGGTGCATCTTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR-3UTR CCA 90 bp | CTCACAGACCACCCCTCAGCTTCAAATGCCCAGCAGAGCCTGCAGCCTCCAGAGAGCCTGCCAAGCCTCTaGTTTTTGTGGTCATCTGTC | + |
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Preference number: 2 (lower is better) Translates to: LTDHPSASNAQQSLQPPESLPSL*FLWSSV Trigger: GACAGATGACCACAAAAACCAGAGGCTTGGCAGGCT...CTCTGGAGGCTGCAGGCTCTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGAGCCTGCCAAGCCTCTaGTTTTTGTGGTCATCTGTC | + |
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Preference number: 2 (lower is better) Translates to: QSLQPPERAKTQCEDCGLSLPSL*FLWSSV Trigger: GACAGATGACCACAAAAACCAGAGGCTTGGCAGGCT...CAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR-3UTR TCA 90 bp | CTCACAGACCACCCCTCAGCTTCAAATGCCCAGCAGAGCCTGCAGCCTCCAGAGTCTCTACAGCAGTTCTaGAAAGGACCAAGTTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LTDHPSASNAQQSLQPPESLQQF*KGPSWE Trigger: CTCCCAACTTGGTCCTTTTCAGAACTGCTGTAGAGA...CTCTGGAGGCTGCAGGCTCTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTCTCTACAGCAGTTCTGAAAAGGACCAAGTTGGGAGCGCTGAGGGTTCCAGACCCGCAGGTTGCTaGGGTCTTCCTGTACTGGGC | + |
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Preference number: 2 (lower is better) Translates to: LFLYSSSEKDQVGSAEGSRPAGC*GLPVLG Trigger: GCCCAGTACAGGAAGACCCCAGCAACCTGCGGGTCT...GGAACCCTCAGCGCTCCCAACTTGGTCCTTTTCAGAACTGCTGTAGAGAAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTCTCTACAGCAGTTCTGAAAAGGACCAAGTTGGGAGCGCTGAGGGTTCCAAAGGGAGGGCCTGCTaGCAAGAGGCTGGCAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LFLYSSSEKDQVGSAEGSKGRAC*QEAGRE Trigger: TTCCCTGCCAGCCTCTTGCCAGCAGGCCCTCCCTTT...GGAACCCTCAGCGCTCCCAACTTGGTCCTTTTCAGAACTGCTGTAGAGAAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTCGTCCTTCCCTCTGACTTCATGGGCCTCATCCTTACCTGAGGTCTTTTGTAGACTCCTTCCTGAGTaGAGGGAGTGGAGCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GSSFPLTSWASSLPEVFCRLLPE*REWSCR Trigger: TCTGCAGCTCCACTCCCTTCACTCAGGAAGGAGTCT...ACAAAAGACCTCAGGTAAGGATGAGGCCCATGAAGTCAGAGGGAAGGACGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGTGTGAGGACTGTGGGCTGCAGAAACCAAGAACTCATCTGCACCTGTGGGGGCCCTCCTTCTGGTaGGGAAAGCTGAACACACAT | + |
|
Preference number: 2 (lower is better) Translates to: TQCEDCGLQKPRTHLHLWGPSFW*GKLNTH Trigger: ATGTGTGTTCAGCTTTCCTCACCAGAAGGAGGGCCC...CCACAGGTGCAGATGAGTTCTTGGTTTCTGCAGCCCACAGTCCTCACACTGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGCAGAAGCCTCTGGTTTTTGTaGTCATCTGTCAGACTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: ACSLQSELRLSVRTVGCRSLWFL*SSVRLL Trigger: AAGGAGTCTGACAGATGACCACAAAAACCAGAGGCT...TCTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACTGTGGGCTGCAGAAACCAAGAACTCATCTGCACCTGTGGGGACAGCGGCCATCTTCTGTAAACAATaGAGGGCAACTAGAGCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: GLWAAETKNSSAPVGTAAIFCKQ*RATRAC Trigger: GCAGGCTCTAGTTGCCCTCCATTGTTTACAGAAGAT...GGCCGCTGTCCCCACAGGTGCAGATGAGTTCTTGGTTTCTGCAGCCCACAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTCAGTGTGAGGACTGTGGGCTGCAGAAACCAAGAACTCATCTGCACCTGTGGCCAGCCCGTGTAGCATaGCTGTTTCTCTACAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: TQCEDCGLQKPRTHLHLWPARVA*LFLYSS Trigger: ACTGCTGTAGAGAAACAGCCATGCTACACGGGCTGG...CCACAGGTGCAGATGAGTTCTTGGTTTCTGCAGCCCACAGTCCTCACACTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACAAGGCTCGTCCTGTGCGGGGGCTCGAGTaGCTGGCAGGACAGCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SPLSQLRSQTIKINKARPVRGLE*LAGQLV Trigger: CACCAGCTGTCCTGCCAGCCACTCGAGCCCCCGCAC...AGGACGAGCCTTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CAA 90 bp | ACTGGACAGGGCTGGGTGACTGTTCCTCAGGGCTCCCTTTCCCATTaGTCTTGGCAGCAATTTCAGCATCAGCCTCTGAAGTTGCAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: TGQGWVTVPQGSLSH*SWQQFQHQPLKLQN Trigger: ATTCTGCAACTTCAGAGGCTGATGCTGAAATTGCTGCCAAGACAAATGGGAAAGGGAGCCCTGAGGAACAGTCACCCAGCCCTGTCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGAAGTTTGAGACTCTTGCCAACAGGGCAAAGAGCTATGGAGAAACACATGGACCAAGTTGGGAGCGCTaGGGGTTCCGAAAGGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LKFETLANRAKSYGETHGPSWER*GFRKEG Trigger: CCCCTCCTTTCGGAACCCTCAGCGCTCCCAACTTGG...TCCATGTGTTTCTCCATAGCTCTTTGCCCTGTTGGCAAGAGTCTCAAACTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | GGACTGTGGGCTGCAGAAACCAAGAACTCATCTGCACCTGTGGGGACAGCGGCCACACACCAGCAGATGTaGCTGAATTATTTACAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: GLWAAETKNSSAPVGTAATHQQM*LNYLQN Trigger: GTTCTGTAAATAATTCAGTCACATCTGCTGGTGTGT...GGCCGCTGTCCCCACAGGTGCAGATGAGTTCTTGGTTTCTGCAGCCCACAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCTCGTCCTTCCCTCTGACTTCATGGGCCTCATCCTTACCTGAGGTCTTTTGTGCAGAATCATTGTCTTaGATGGGTGTGGTGGCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: GSSFPLTSWASSLPEVFCAESLS*MGVVAH Trigger: GTGAGCCACCACACCCATTCAAGACAATGATTCTGC...ACAAAAGACCTCAGGTAAGGATGAGGCCCATGAAGTCAGAGGGAAGGACGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTGAATTTTATACACGATTCTTGAATCTTGTGGAAATTTGGGCACGGCCTGACCTGGACAGGGCTGGGTaGCTGTTCCTCAGGGCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: AEFYTRFLNLVEIWARPDLDRAG*LFLRAP Trigger: GGGAGCCCTGAGGAACAGTCACCCAGCCCTGTCCAG...GTCAGGCCGTGCCCAAATTTCCACAAGATTCAAGAATCGTGTATAAAATTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCAATAAATTTATGGGGAAACACGACAGGCTCCTCATTAAAGCTATGTGTACGGGTTTGCCTTGCAGGTaGCCGCTGGTGAGCGTGCGG | + |
|
Preference number: 2 (lower is better) Translates to: GNKFMGKHDRLLIKAMCTGLPCR*PLVSVR Trigger: CCGCACGCTCACCAGCGGTCACCTGCAAGGCAAACC...CGTACACATAGCTTTAATGAGGAGCCTGTCGTGTTTCCCCATAAATTTATTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR GCA 90 bp | GACCACGCCAGTAAATACACAGCAATTCTAACAGCTTTGCCGAAACAGTCTCTGATGCCCAGCAGAGCCTaGAGCCTCCAGAGCGAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: DHASKYTAILTALPKQSLMPSRA*SLQSEL Trigger: TAGCTCGCTCTGGAGGCTGCAGGCTCTGCTGGGCAT...CAGAGACTGTTTCGGCAAAGCTGTTAGAATTGCTGTGTATTTACTGGCGTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACTGTGGGCTGCAGAAACCAAGAACTCATCTGCACCTGTGGGGACAGCGGCCTTTACAGAACAACACTaGTTACAGACCAAACAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: GLWAAETKNSSAPVGTAAFTEQH*LQTKQA Trigger: AGCCTGTTTGGTCTGTAACCAGTGTTGTTCTGTAAA...GGCCGCTGTCCCCACAGGTGCAGATGAGTTCTTGGTTTCTGCAGCCCACAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTGCATCTGTGTGAGTGAGGAAGTGCCGAATGAAGACAGTGATTTGCAAGGAGAAAGGGGCAGGCCATaGAGCAGAGGCAGCTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: VCICVSEEVPNEDSDLQGERGRP*SRGSFP Trigger: AGGGAAGCTGCCTCTGCTCCATGGCCTGCCCCTTTC...TCCTTGCAAATCACTGTCTTCATTCGGCACTTCCTCACTCACACAGATGCAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115130.3 |
||
| 3UTR-3UTR CCA 90 bp | GGCAATAAATTTATGGGGAAACACGACAGGCTCCTCATTAAAGCTATGTGTACGGGCTGGCAGGACAGCTaGTGGGCAGGTTCTGGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: GNKFMGKHDRLLIKAMCTGWQDS*WAGSGH Trigger: GTGGCCAGAACCTGCCCACCAGCTGTCCTGCCAGCC...CGTACACATAGCTTTAATGAGGAGCCTGTCGTGTTTCCCCATAAATTTATTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CAA 90 bp | ACAGGGCTGGGTGACTGTTCCTCAGGGCTCCCTTTCCCATTTGTCTaGGCAGCAATTTCAGCATCAGCCTCTGAAGTTGCAGAATCATTG | + |
|
Preference number: 2 (lower is better) Translates to: TGLGDCSSGLPFPFV*AAISASASEVAESL Trigger: CAATGATTCTGCAACTTCAGAGGCTGATGCTGAAATTGCTGCCAAGACAAATGGGAAAGGGAGCCCTGAGGAACAGTCACCCAGCCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGCAGAACCAGCAGATGTGACTaGATTATTTACAGAACAACA | + |
|
Preference number: 2 (lower is better) Translates to: ACSLQSELRLSVRTVGCRTSRCD*IIYRTT Trigger: TGTTGTTCTGTAAATAATTCAGTCACATCTGCTGGT...TCTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCTTATCACAGCTACGATCACAGACCATAAAAATTAACAAGGCTCGTCCTTCCGGGGTCTTCCTGTACTaGGCCCTCCTTCTGGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: PLSQLRSQTIKINKARPSGVFLY*ALLLVR Trigger: CCTCACCAGAAGGAGGGCCCAGTACAGGAAGACCCC...GGAAGGACGAGCCTTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAACACATGGAAATACATTCAGCCTGCTAGACCACGCCAGTAAATACACAGCAAGGGGACAGCTGTGGTaGCCTTCCAAGGCTCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: ETHGNTFSLLDHASKYTARGQLW*PSKALS Trigger: GCTGAGAGCCTTGGAAGGCCACCACAGCTGTCCCCT...TGCTGTGTATTTACTGGCGTGGTCTAGCAGGCTGAATGTATTTCCATGTGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAACACGACAGGCTCCTCATTAAAGCTATGTGTACGTTGGCTGAATTTTATATGCCCAGCAGAGCCTaGAGCCTCCAGAGCGAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: GKHDRLLIKAMCTLAEFYMPSRA*SLQSEL Trigger: TAGCTCGCTCTGGAGGCTGCAGGCTCTGCTGGGCAT...ATAAAATTCAGCCAACGTACACATAGCTTTAATGAGGAGCCTGTCGTGTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAACACGACAGGCTCCTCATTAAAGCTATGTGTACGTTGGCTGAATTTTATGGGGTCTTCCTGTACTaGGCCCTCCTTCTGGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: GKHDRLLIKAMCTLAEFYGVFLY*ALLLVR Trigger: CCTCACCAGAAGGAGGGCCCAGTACAGGAAGACCCC...ATAAAATTCAGCCAACGTACACATAGCTTTAATGAGGAGCCTGTCGTGTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTCCAGCAGAGTTATTCTGGTTCAGTCGGCTAGGGTTGTCTGCTGGTCCCTGTGGATAGAGTTGCAATaGGGTAACTGTAAGCCCCGA | + |
|
Preference number: 2 (lower is better) Translates to: FSSRVILVQSARVVCWSLWIELQ*GNCKPR Trigger: TCGGGGCTTACAGTTACCCCATTGCAACTCTATCCA...CAGGGACCAGCAGACAACCCTAGCCGACTGAACCAGAATAACTCTGCTGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGTTTCTCTACAGCAGTTCTGAAAAGGACCAAGTTGGGAGCGCTGAGGGTTCCAGGGGTTCATTGTCCTaGATAGAGTTGCAATGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: LFLYSSSEKDQVGSAEGSRGSLS*IELQWG Trigger: ACCCCATTGCAACTCTATCCAGGACAATGAACCCCT...GGAACCCTCAGCGCTCCCAACTTGGTCCTTTTCAGAACTGCTGTAGAGAAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCTGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCTTTCTCAGCTGGCAGGGCTaGCATTTTGGGGCCACGTCG | + |
|
Preference number: 2 (lower is better) Translates to: SAGFSEAGCHDKEHNLFFLSWQG*HFGATS Trigger: CGACGTGGCCCCAAAATGCCAGCCCTGCCAGCTGAG...AAAGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGCTAAACCAGCAAGATGCACCCATGCTCACAGACCACCCCTCAGCTTCAAATTCAGCATCAGCCTCTaGAGTTGCAGAATCATTGTC | + |
|
Preference number: 2 (lower is better) Translates to: SAKPARCTHAHRPPLSFKFSISL*SCRIIV Trigger: GACAATGATTCTGCAACTTCAGAGGCTGATGCTGAA...TTTGAAGCTGAGGGGTGGTCTGTGAGCATGGGTGCATCTTGCTGGTTTAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTGAATTTTATACACGATTCTTGAATCTTGTGGAAATTTGGGCACGGCCTGACCTGGCAGGGAACCAGTaGCCAGTCCTTCTGGGAACT | + |
|
Preference number: 2 (lower is better) Translates to: AEFYTRFLNLVEIWARPDLAGNQ*PVLLGT Trigger: AGTTCCCAGAAGGACTGGTCACTGGTTCCCTGCCAG...GTCAGGCCGTGCCCAAATTTCCACAAGATTCAAGAATCGTGTATAAAATTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | TATACAGTCATTTCCAACACTAACATCCATTGGTGGGAATGCAGATCAGGAACAAGGGGACAGCTGTGGTaGCCTTCCAAGGCTCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: YTVISNTNIHWWECRSGTRGQLW*PSKALS Trigger: GCTGAGAGCCTTGGAAGGCCACCACAGCTGTCCCCT...TGTTCCTGATCTGCATTCCCACCAATGGATGTTAGTGTTGGAAATGACTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR CAA 90 bp | ACACATCTTTGTGGTCCCAGGAAACCATTTAAGGAGAGGATCATTTaGCACAGAGCCTCTCTGCTAAACCAGCAAGATGCACCCATGCTC | + |
|
Preference number: 2 (lower is better) Translates to: THLCGPRKPFKERII*HRASLLNQQDAPML Trigger: GAGCATGGGTGCATCTTGCTGGTTTAGCAGAGAGGCTCTGTGCAAAATGATCCTCTCCTTAAATGGTTTCCTGGGACCACAAAGATGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACAAGGCTCGTCCTAGACTCCTTCCTGAGTaGAGGGAGTGGAGCTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: SPLSQLRSQTIKINKARPRLLPE*REWSCR Trigger: TCTGCAGCTCCACTCCCTTCACTCAGGAAGGAGTCT...AGGACGAGCCTTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAACACATGGAAATACATTCAGCCTGCTAGACCACGCCAGTAAATACACAGCAGCACGGCCTGACATCTaGACAATGTCCCTGGTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: ETHGNTFSLLDHASKYTAARPDI*TMSLVC Trigger: ACAAACCAGGGACATTGTTCAGATGTCAGGCCGTGC...TGCTGTGTATTTACTGGCGTGGTCTAGCAGGCTGAATGTATTTCCATGTGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACAAGGCTCGTCCTTTCACTTCCAGGGTTTaGCTTGCAGGTGACCGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SPLSQLRSQTIKINKARPFTSRV*LAGDRW Trigger: CCAGCGGTCACCTGCAAGGCAAACCCTGGAAGTGAA...AGGACGAGCCTTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTGCCATGACAAAGAGCACAATTTATTCTTTAGTCCCTTATCACAGCTACGATAGACCCGCAGGTTGCTaGGGTCTTCCTGTACTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: VAMTKSTIYSLVPYHSYDRPAGC*GLPVLG Trigger: GCCCAGTACAGGAAGACCCCAGCAACCTGCGGGTCT...ATCGTAGCTGTGATAAGGGACTAAAGAATAAATTGTGCTCTTTGTCATGGCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | GACAAAGAGCACAATTTATTCTTTAGTCCCTTATCACAGCTACGATCACAGACCGCTAGGGTTGTCTGCTaGTCCCTGGTCCTCTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: DKEHNLFFSPLSQLRSQTARVVC*SLVLFQ Trigger: CTGGAAGAGGACCAGGGACCAGCAGACAACCCTAGC...GGTCTGTGATCGTAGCTGTGATAAGGGACTAAAGAATAAATTGTGCTCTTTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CAA 90 bp | CTTTCCCATTTGTCTTGGCAGCAATTTCAGCATCAGCCTCTGAAGTaGCAGAATCATTGTCTTGAATGGGTGTGGTGGCTCACAGCCATA | + |
|
Preference number: 2 (lower is better) Translates to: LSHLSWQQFQHQPLK*QNHCLEWVWWLTAI Trigger: TATGGCTGTGAGCCACCACACCCATTCAAGACAATGATTCTGCAACTTCAGAGGCTGATGCTGAAATTGCTGCCAAGACAAATGGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR GCA 90 bp | GACAAAGAGCACAATTTATTCTTTAGTCCCTTATCACAGCTACGATCACAGACCAGCAAGATGCACCCATaGTCACAGACCACCCCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: DKEHNLFFSPLSQLRSQTSKMHP*SQTTPQ Trigger: CTGAGGGGTGGTCTGTGAGCATGGGTGCATCTTGCT...GGTCTGTGATCGTAGCTGTGATAAGGGACTAAAGAATAAATTGTGCTCTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAACACGACAGGCTCCTCATTAAAGCTATGTGTACGTTGGCTGAATTTTATCCAGCCCGTGTAGCATaGCTGTTTCTCTACAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GKHDRLLIKAMCTLAEFYPARVA*LFLYSS Trigger: ACTGCTGTAGAGAAACAGCCATGCTACACGGGCTGG...ATAAAATTCAGCCAACGTACACATAGCTTTAATGAGGAGCCTGTCGTGTTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | GACAAAGAGCACAATTTATTCTTTAGTCCCTTATCACAGCTACGATCACAGACCACTCATCTGCACCTGTaGGGACAGCGGCCAATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: DKEHNLFFSPLSQLRSQTTHLHL*GQRPIP Trigger: TGGAATTGGCCGCTGTCCCCACAGGTGCAGATGAGT...GGTCTGTGATCGTAGCTGTGATAAGGGACTAAAGAATAAATTGTGCTCTTTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTGCCATGACAAAGAGCACAATTTATTCTTTAGTCCCTTATCACAGCTACGATAACCAAGAACTCATCTaGACCTGTGGGGACAGCGGC | + |
|
Preference number: 2 (lower is better) Translates to: VAMTKSTIYSLVPYHSYDNQELI*TCGDSG Trigger: GCCGCTGTCCCCACAGGTGCAGATGAGTTCTTGGTT...ATCGTAGCTGTGATAAGGGACTAAAGAATAAATTGTGCTCTTTGTCATGGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGATGCTTTCAAATGACTGTGATTTCTATCCCTTTAACATAGCTGGACTCACAACTCATCTGCACCTGTaGGGACAGCGGCCAATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LMLSNDCDFYPFNIAGLTTHLHL*GQRPIP Trigger: TGGAATTGGCCGCTGTCCCCACAGGTGCAGATGAGT...TGTGAGTCCAGCTATGTTAAAGGGATAGAAATCACAGTCATTTGAAAGCATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCAATAAATTTATGGGGAAACACGACAGGCTCCTCATTAAAGCTATGTGTACGTTCCCTCTGACTTCATaGGCCTCATCCTTACCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GNKFMGKHDRLLIKAMCTFPLTS*ASSLPE Trigger: CTCAGGTAAGGATGAGGCCCATGAAGTCAGAGGGAA...CGTACACATAGCTTTAATGAGGAGCCTGTCGTGTTTCCCCATAAATTTATTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAACACGACAGGCTCCTCATTAAAGCTATGTGTACGTTGGCTGAATTTTATCGGGGCTGGGTTGACTaGGTTATTTTTCCATATGTC | + |
|
Preference number: 2 (lower is better) Translates to: GKHDRLLIKAMCTLAEFYRGWVD*VIFPYV Trigger: GACATATGGAAAAATAACTCAGTCAACCCAGCCCCG...ATAAAATTCAGCCAACGTACACATAGCTTTAATGAGGAGCCTGTCGTGTTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | AAATTTATGGGGAAACACGACAGGCTCCTCATTAAAGCTATGTGTACGTTGGCTGAAGCGGGGCTGGGTTaGCTGAGTTATTTTTCCATA | + |
|
Preference number: 2 (lower is better) Translates to: KFMGKHDRLLIKAMCTLAEAGLG*LSYFSI Trigger: TATGGAAAAATAACTCAGTCAACCCAGCCCCGCTTC...AGCCAACGTACACATAGCTTTAATGAGGAGCCTGTCGTGTTTCCCCATAAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGACAGAGACTTCCAAAACAGAATTGGGTGTAGAGGTCTACCTCCTGACTGGCTGTCCCTGGTTTGTTTaGTTTCTAAAGCATTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: QTETSKTELGVEVYLLTGCPWFV*FLKHWK Trigger: TTTCCAATGCTTTAGAAATCAAACAAACCAGGGACA...GCCAGTCAGGAGGTAGACCTCTACACCCAATTCTGTTTTGGAAGTCTCTGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGATGCTTTCAAATGACTGTGATTTCTATCCCTTTAACATAGCTGGACTCACACCAGCCCGTGTAGCATaGCTGTTTCTCTACAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LMLSNDCDFYPFNIAGLTPARVA*LFLYSS Trigger: ACTGCTGTAGAGAAACAGCCATGCTACACGGGCTGG...TGTGAGTCCAGCTATGTTAAAGGGATAGAAATCACAGTCATTTGAAAGCATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | GACAAAGAGCACAATTTATTCTTTAGTCCCTTATCACAGCTACGATCACAGACCTCTCTACAGCAGTTCTaGAAAGGACCAAGTTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: DKEHNLFFSPLSQLRSQTSLQQF*KGPSWE Trigger: CTCCCAACTTGGTCCTTTTCAGAACTGCTGTAGAGA...GGTCTGTGATCGTAGCTGTGATAAGGGACTAAAGAATAAATTGTGCTCTTTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGGATGTCAGTCATCTAGCAATTCAATTAATGCCGATTCAAAATTCCGGCCAAGCCTGCCAAGCCTCTaGTTTTTGTGGTCATCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: NGCQSSSNSINADSKFRPSLPSL*FLWSSV Trigger: GACAGATGACCACAAAAACCAGAGGCTTGGCAGGCT...TGGCCGGAATTTTGAATCGGCATTAATTGAATTGCTAGATGACTGACATCCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATTTATGGGGAAACACGACAGGCTCCTCATTAAAGCTATGTGTACGTTGGCTATGATGATCTTGCCGTaGGCGTTCTTGTACTCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: KFMGKHDRLLIKAMCTLAMMILP*AFLYSR Trigger: TCTTGAGTACAAGAACGCCCACGGCAAGATCATCAT...AGCCAACGTACACATAGCTTTAATGAGGAGCCTGTCGTGTTTCCCCATAAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | GACCACGCCAGTAAATACACAGCAATTCTAACAGCTTTGCCGAAACAGTCTCTGTGTCCCTGGTTTGTTTaGTTTCTAAAGCATTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: DHASKYTAILTALPKQSLCPWFV*FLKHWK Trigger: TTTCCAATGCTTTAGAAATCAAACAAACCAGGGACA...CAGAGACTGTTTCGGCAAAGCTGTTAGAATTGCTGTGTATTTACTGGCGTGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCTGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCTTTAGCCTCTGGTTTTTGTaGTCATCTGTCAGACTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SAGFSEAGCHDKEHNLFFSLWFL*SSVRLL Trigger: AAGGAGTCTGACAGATGACCACAAAAACCAGAGGCT...AAAGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCAGCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | GACCACGCCAGTAAATACACAGCAATTCTAACAGCTTTGCCGAAACAGTCTCTGGAAAATGTTGCACTCTaGAAATCAAGTGGAGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: DHASKYTAILTALPKQSLENVAL*KSSGEE Trigger: TTCTTCTCCACTTGATTTCCAGAGTGCAACATTTTC...CAGAGACTGTTTCGGCAAAGCTGTTAGAATTGCTGTGTATTTACTGGCGTGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAACACATGGAAATACATTCAGCCTGCTAGACCACGCCAGTAAATACACAGCAAAGAAACTGGTAAAGTaGAACGTTAGGAAGCAACAG | + |
|
Preference number: 2 (lower is better) Translates to: ETHGNTFSLLDHASKYTAKKLVK*NVRKQQ Trigger: CTGTTGCTTCCTAACGTTCCACTTTACCAGTTTCTT...TGCTGTGTATTTACTGGCGTGGTCTAGCAGGCTGAATGTATTTCCATGTGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGATGCTTTCAAATGACTGTGATTTCTATCCCTTTAACATAGCTGGACTCACAAATCATTGTCTTGAATaGGTGTGGTGGCTCACAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LMLSNDCDFYPFNIAGLTNHCLE*VWWLTA Trigger: GGCTGTGAGCCACCACACCCATTCAAGACAATGATT...TGTGAGTCCAGCTATGTTAAAGGGATAGAAATCACAGTCATTTGAAAGCATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAACACGACAGGCTCCTCATTAAAGCTATGTGTACGTTGGCTGAATTTTATTTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAAT | + |
|
Preference number: 2 (lower is better) Translates to: GKHDRLLIKAMCTLAEFYFSEAG*HDKEHN Trigger: ATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAA...ATAAAATTCAGCCAACGTACACATAGCTTTAATGAGGAGCCTGTCGTGTTTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAACACGACAGGCTCCTCATTAAAGCTATGTGTACGTTGGCTGAATTTTATTTTACAGAACAACACTaGTTACAGACCAAACAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: GKHDRLLIKAMCTLAEFYFTEQH*LQTKQA Trigger: AGCCTGTTTGGTCTGTAACCAGTGTTGTTCTGTAAA...ATAAAATTCAGCCAACGTACACATAGCTTTAATGAGGAGCCTGTCGTGTTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTGAATTTTATACACGATTCTTGAATCTTGTGGAAATTTGGGCACGGCCTGACGAAAATGTTGCACTCTaGAAATCAAGTGGAGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: AEFYTRFLNLVEIWARPDENVAL*KSSGEE Trigger: TTCTTCTCCACTTGATTTCCAGAGTGCAACATTTTC...GTCAGGCCGTGCCCAAATTTCCACAAGATTCAAGAATCGTGTATAAAATTCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCTGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCTTTGCTTGTCTTTGCCATTaGGTTCTTCTTTCTTTACGA | + |
|
Preference number: 2 (lower is better) Translates to: SAGFSEAGCHDKEHNLFFACLCH*VLLSLR Trigger: TCGTAAAGAAAGAAGAACCCAATGGCAAAGACAAGC...AAAGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCAGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAGCTGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCTTTACCAGCAGATGTGACTaGATTATTTACAGAACAACA | + |
|
Preference number: 2 (lower is better) Translates to: SAGFSEAGCHDKEHNLFFTSRCD*IIYRTT Trigger: TGTTGTTCTGTAAATAATTCAGTCACATCTGCTGGT...AAAGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCAGCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTGCCATGACAAAGAGCACAATTTATTCTTTAGTCCCTTATCACAGCTACGATACACACCAGCAGATGTaGCTGAATTATTTACAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: VAMTKSTIYSLVPYHSYDTHQQM*LNYLQN Trigger: GTTCTGTAAATAATTCAGTCACATCTGCTGGTGTGT...ATCGTAGCTGTGATAAGGGACTAAAGAATAAATTGTGCTCTTTGTCATGGCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | GCGTGCGGGGGCTCGAGTGGCTGGCAGGACAGCTGGTaGGCAGGTTCTGGCCACCGCGGCAAGCAGCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: ACGGSSGWQDSW*AGSGHRGKQPP Trigger: AGGTGGCTGCTTGCCGCGGTGGCCAGAACCTGCCCACCAGCTGTCCTGCCAGCCACTCGAGCCCCCGCACGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR TCA 72 bp | TTCACTTCCAGGGTTTGCCTTGCAGGTGACCGCTGGTaGGCGTGCGGGGGCTCGAGTGGCTGGCAGGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: FTSRVCLAGDRW*ACGGSSGWQDS Trigger: GCTGTCCTGCCAGCCACTCGAGCCCCCGCACGCTCACCAGCGGTCACCTGCAAGGCAAACCCTGGAAGTGAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR TCA 72 bp | AACACAGGCCTTCACTTCCAGGGTTTGCCTTGCAGGTaGCCGCTGGTGAGCGTGCGGGGGCTCGAGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: NTGLHFQGLPCR*PLVSVRGLEWL Trigger: CAGCCACTCGAGCCCCCGCACGCTCACCAGCGGTCACCTGCAAGGCAAACCCTGGAAGTGAAGGCCTGTGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR GCA 72 bp | GATGACGCTCTGCAGAGTGGAGCGGCTGGAGTCCCCTaGTCCCGTGCTGTTGATGAACTGGACAGGGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: DDALQSGAAGVP*SRAVDELDRAG Trigger: CCCAGCCCTGTCCAGTTCATCAACAGCACGGGAGCAGGGGACTCCAGCCGCTCCACTCTGCAGAGCGTCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | CGGCTGGAGTCCCCTGCTCCCGTGCTGTTGATGAACTaGACAGGGCTGGGTGACTGTTCCTCAGGGCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: RLESPAPVLLMN*TGLGDCSSGLP Trigger: AGGGAGCCCTGAGGAACAGTCACCCAGCCCTGTCCAGTTCATCAACAGCACGGGAGCAGGGGACTCCAGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | CTCGAGTGGCTGGCAGGACAGCTGGTGGGCAGGTTCTaGCCACCGCGGCAAGCAGCCACCTTCGAGTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LEWLAGQLVGRF*PPRQAATFESF Trigger: AAAAGACTCGAAGGTGGCTGCTTGCCGCGGTGGCCAGAACCTGCCCACCAGCTGTCCTGCCAGCCACTCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | CGTCGTTTCCGGACAGAACCAAAAGGGAGGGCCTGCTaGCAAGAGGCTGGCAGGGAACCAGTGACCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RRFRTEPKGRAC*QEAGREPVTSP Trigger: AGGACTGGTCACTGGTTCCCTGCCAGCCTCTTGCCAGCAGGCCCTCCCTTTTGGTTCTGTCCGGAAACGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR GCA 72 bp | GTGAGGACTGTGGGCTGCAGAAACCAAGAACTCATCTaGACCTGTGGGGACAGCGGCCAATTCCAGGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: VRTVGCRNQELI*TCGDSGQFQAH Trigger: GTGGGCCTGGAATTGGCCGCTGTCCCCACAGGTGCAGATGAGTTCTTGGTTTCTGCAGCCCACAGTCCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR GCA 72 bp | CAGACCACCCCTCAGCTTCAAATGCCCAGCAGAGCCTaGAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QTTPQLQMPSRA*SLQSELRLSVR Trigger: CCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGCTCTGCTGGGCATTTGAAGCTGAGGGGTGGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | AGCACAGACCCGCAGGTTGCTGGGGTCTTCCTGTACTaGGCCCTCCTTCTGGTGAGGAAAGCTGAACACACA | + |
|
Preference number: 3 (lower is better) Translates to: STDPQVAGVFLY*ALLLVRKAEHT Trigger: TGTGTGTTCAGCTTTCCTCACCAGAAGGAGGGCCCAGTACAGGAAGACCCCAGCAACCTGCGGGTCTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | TTTTCAAACCCACGCTCACACATGGTGGTGGCCGCCTaGCTGGCCAGCCTCTCGTCCTCGTCGTATAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: FSNPRSHMVVAA*LASLSSSSYKM Trigger: CATCTTATACGACGAGGACGAGAGGCTGGCCAGCCAGGCGGCCACCACCATGTGTGAGCGTGGGTTTGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | GACAGAACCAAAAGGGAGGGCCTGCTGGCAAGAGGCTaGCAGGGAACCAGTGACCAGTCCTTCTGGGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: DRTKREGLLARG*QGTSDQSFWEL Trigger: AAGTTCCCAGAAGGACTGGTCACTGGTTCCCTGCCAGCCTCTTGCCAGCAGGCCCTCCCTTTTGGTTCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCACAGACCACCCCTCAGCTTCAAATGCCCAGCAGAGCCTGCAGCCTCCAGAGCCAAGCCTCTGGTTTTaGTGGTCATCTGTCAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: LTDHPSASNAQQSLQPPEPSLWF*WSSVRL Trigger: GAGTCTGACAGATGACCACAAAAACCAGAGGCTTGG...CTCTGGAGGCTGCAGGCTCTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR TCA 72 bp | TTGCTGGGGTCTTCCTGTACTGGGCCCTCCTTCTGGTaGGGAAAGCTGAACACACATCTTTGTGGTCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLGSSCTGPSFW*GKLNTHLCGPR Trigger: CCTGGGACCACAAAGATGTGTGTTCAGCTTTCCTCACCAGAAGGAGGGCCCAGTACAGGAAGACCCCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR TCA 72 bp | TGCTCCCGTGCTGTTGATGAACTGGACAGGGCTGGGTaGCTGTTCCTCAGGGCTCCCTTTCCCATTTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: CSRAVDELDRAG*LFLRAPFPICL Trigger: AAGACAAATGGGAAAGGGAGCCCTGAGGAACAGTCACCCAGCCCTGTCCAGTTCATCAACAGCACGGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR GCA 72 bp | CAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTaGAGAAACCAAGAACTCATCTGCACCTGTGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: QSELRLSVRTVG*RNQELICTCGD Trigger: GTCCCCACAGGTGCAGATGAGTTCTTGGTTTCTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | ATCTCCACTTGTTCTCAGCTGGCAGGGCTGGCATTTTaGGGCCACGTCGTTTCCGGACAGAACCAAAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ISTCSQLAGLAF*GHVVSGQNQKG Trigger: TCCCTTTTGGTTCTGTCCGGAAACGACGTGGCCCCAAAATGCCAGCCCTGCCAGCTGAGAACAAGTGGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | GCAGCCACCTTCGAGTCTTTTCCAGCAGAGTTATTCTaGTTCAGTCGGCTAGGGTTGTCTGCTGGTCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AATFESFPAELF*FSRLGLSAGPW Trigger: CCAGGGACCAGCAGACAACCCTAGCCGACTGAACCAGAATAACTCTGCTGGAAAAGACTCGAAGGTGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR TCA 72 bp | TGGTTTTTGTGGTCATCTGTCAGACTCCTTCCTGAGTaGAGGGAGTGGAGCTGCAGACGGACAAGTGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: WFLWSSVRLLPE*REWSCRRTSGP Trigger: AGGCCCACTTGTCCGTCTGCAGCTCCACTCCCTTCACTCAGGAAGGAGTCTGACAGATGACCACAAAAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR TCA 72 bp | GGCAGGGAACCAGTGACCAGTCCTTCTGGGAACTTCTaGGCTAAGACTTTCAGACCCCCGGAAAGCATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GREPVTSPSGNF*AKTFRPPESMK Trigger: CTTCATGCTTTCCGGGGGTCTGAAAGTCTTAGCTCAGAAGTTCCCAGAAGGACTGGTCACTGGTTCCCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | AGACGGACAAGTGGGCCTGGTCCAGCCCGTGTAGCATaGCTGTTTCTCTACAGCAGTTCTGAAAAGGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: RRTSGPGPARVA*LFLYSSSEKDQ Trigger: TTGGTCCTTTTCAGAACTGCTGTAGAGAAACAGCCATGCTACACGGGCTGGACCAGGCCCACTTGTCCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR TCA 72 bp | GAGAGGAACACTGAGTGCAGAAGGGGTCGGCTCTCTTaGAGTTTGAGACTCTTGCCAACAGGGCAAAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ERNTECRRGRLS*SLRLLPTGQRA Trigger: AGCTCTTTGCCCTGTTGGCAAGAGTCTCAAACTTCAAGAGAGCCGACCCCTTCTGCACTCAGTGTTCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCGTCCTTCCCTCTGACTTCATGGGCCTCATCCTTACCTGAGGTCTTTTGTGCTGAACACACATCTTaGTGGTCCCAGGAAACCATT | + |
|
Preference number: 3 (lower is better) Translates to: GSSFPLTSWASSLPEVFCAEHTS*WSQETI Trigger: AATGGTTTCCTGGGACCACAAAGATGTGTGTTCAGC...ACAAAAGACCTCAGGTAAGGATGAGGCCCATGAAGTCAGAGGGAAGGACGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCAGTGTGAGGACTGTGGGCTGCAGAAACCAAGAACTCATCTGCACCTGTGGTTCTTTACGAGCCCTTaGTCTACATCCAGTTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TQCEDCGLQKPRTHLHLWFFTSP*STSSSP Trigger: TGGGGAACTGGATGTAGACAAAGGGCTCGTAAAGAA...CCACAGGTGCAGATGAGTTCTTGGTTTCTGCAGCCCACAGTCCTCACACTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR GCA 72 bp | CATTTTGCACAGAGCCTCTCTGCTAAACCAGCAAGATaGACCCATGCTCACAGACCACCCCTCAGCTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: HFAQSLSAKPAR*THAHRPPLSFK Trigger: TTTGAAGCTGAGGGGTGGTCTGTGAGCATGGGTGCATCTTGCTGGTTTAGCAGAGAGGCTCTGTGCAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCGTCCTTCCCTCTGACTTCATGGGCCTCATCCTTACCTGAGGTCTTTTGTTTGCCGTGGGCGTTCTaGTACTCAAGAATGTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: GSSFPLTSWASSLPEVFCLPWAF*YSRMSF Trigger: AAATGACATTCTTGAGTACAAGAACGCCCACGGCAA...ACAAAAGACCTCAGGTAAGGATGAGGCCCATGAAGTCAGAGGGAAGGACGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR TCA 72 bp | CTTCCTGTACTGGGCCCTCCTTCTGGTGAGGAAAGCTaGACACACATCTTTGTGGTCCCAGGAAACCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: LPVLGPPSGEES*THIFVVPGNHL Trigger: TAAATGGTTTCCTGGGACCACAAAGATGTGTGTTCAGCTTTCCTCACCAGAAGGAGGGCCCAGTACAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR TCA 72 bp | ACTTCTGAGCTAAGACTTTCAGACCCCCGGAAAGCATaGAGAGGTTTTCAAACCCACGCTCACACATGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TSELRLSDPRKA*RGFQTHAHTWW Trigger: CCACCATGTGTGAGCGTGGGTTTGAAAACCTCTTCATGCTTTCCGGGGGTCTGAAAGTCTTAGCTCAGAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR GCA 72 bp | AGCAGAGTTATTCTGGTTCAGTCGGCTAGGGTTGTCTaGTGGTCCCTGGTCCTCTTCCAGGTAACATTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: SRVILVQSARVV*WSLVLFQVTFY Trigger: ATAGAATGTTACCTGGAAGAGGACCAGGGACCAGCAGACAACCCTAGCCGACTGAACCAGAATAACTCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | AAACTGGTAAAGTGGAACGTTAGGAAGCAACAGTGTTaGAGAGGAACACTGAGTGCAGAAGGGGTCGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: KLVKWNVRKQQC*RGTLSAEGVGS Trigger: AGAGCCGACCCCTTCTGCACTCAGTGTTCCTCTCCAACACTGTTGCTTCCTAACGTTCCACTTTACCAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCGCGGCAAGCAGCCACCTTCGAGTCTTTTCCAGCAGAGTTATTCTGGTTCACATCAGCCTCTGAAGTaGCAGAATCATTGTCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: HRGKQPPSSLFQQSYSGSHQPLK*QNHCLE Trigger: TTCAAGACAATGATTCTGCAACTTCAGAGGCTGATG...TGAACCAGAATAACTCTGCTGGAAAAGACTCGAAGGTGGCTGCTTGCCGCGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTTCTCTACAGCAGTTCTGAAAAGGACCAAGTTGGGAGCGCTGAGGGTTCCTTGTCCTGGATAGAGTaGCAATGGGGTAACTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LFLYSSSEKDQVGSAEGSLSWIE*QWGNCK Trigger: CTTACAGTTACCCCATTGCAACTCTATCCAGGACAA...GGAACCCTCAGCGCTCCCAACTTGGTCCTTTTCAGAACTGCTGTAGAGAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | AGAGTTATTCTGGTTCAGTCGGCTAGGGTTGTCTGCTaGTCCCTGGTCCTCTTCCAGGTAACATTCTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: RVILVQSARVVC*SLVLFQVTFYL Trigger: AAGATAGAATGTTACCTGGAAGAGGACCAGGGACCAGCAGACAACCCTAGCCGACTGAACCAGAATAACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGACAGAGACTTCCAAAACAGAATTGGGTGTAGAGGTCTACCTCCTGACTGGCACTTCCAAAACAGAATaGGGTGTAGAGGTCTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: QTETSKTELGVEVYLLTGTSKTE*GVEVYL Trigger: GAGGTAGACCTCTACACCCAATTCTGTTTTGGAAGT...GCCAGTCAGGAGGTAGACCTCTACACCCAATTCTGTTTTGGAAGTCTCTGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCGCGGCAAGCAGCCACCTTCGAGTCTTTTCCAGCAGAGTTATTCTGGTTCAACTCAAGAATGTCATTaGAATAGGGGTTCATTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: HRGKQPPSSLFQQSYSGSTQECH*NRGSLS Trigger: GGACAATGAACCCCTATTCAAATGACATTCTTGAGT...TGAACCAGAATAACTCTGCTGGAAAAGACTCGAAGGTGGCTGCTTGCCGCGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGACAGAGACTTCCAAAACAGAATTGGGTGTAGAGGTCTACCTCCTGACTGGCCATGCTAGGGGAAAGTaGAGTGTGGAAAAATTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QTETSKTELGVEVYLLTGHARGK*SVEKFA Trigger: TGCAAATTTTTCCACACTCAACTTTCCCCTAGCATG...GCCAGTCAGGAGGTAGACCTCTACACCCAATTCTGTTTTGGAAGTCTCTGTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACCTGTGTGTCCCCTTGTCCGTGTGAAGCTGATGCTTTCAAATGACTGTGATGGCTTGTCTTTGCCATaGGGTTCTTCTTTCTTTACG | + |
|
Preference number: 3 (lower is better) Translates to: SPVCPLVRVKLMLSNDCDGLSLP*GSSFFT Trigger: CGTAAAGAAAGAAGAACCCAATGGCAAAGACAAGCC...ATCACAGTCATTTGAAAGCATCAGCTTCACACGGACAAGGGGACACACAGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | GACAAAGAGCACAATTTATTCTTTAGTCCCTTATCACAGCTACGATCACAGACCGGGGTAAATCTCCACTaGTTCTCAGCTGGCAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: DKEHNLFFSPLSQLRSQTGVNLH*FSAGRA Trigger: AGCCCTGCCAGCTGAGAACAAGTGGAGATTTACCCC...GGTCTGTGATCGTAGCTGTGATAAGGGACTAAAGAATAAATTGTGCTCTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | CCTCTGAAGTTGCAGAATCATTGTCTTGAATGGGTGTaGTGGCTCACAGCCATAGTCTTAGCATTTCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PLKLQNHCLEWV*WLTAIVLAFQR Trigger: CCTCTGAAATGCTAAGACTATGGCTGTGAGCCACCACACCCATTCAAGACAATGATTCTGCAACTTCAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | GGAAGGGACAGTCCGGATAAGGCTTGTCTTTGCCATTaGGTTCTTCTTTCTTTACGAGCCCTTTGTCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: GRDSPDKACLCH*VLLSLRALCLH Trigger: ATGTAGACAAAGGGCTCGTAAAGAAAGAAGAACCCAATGGCAAAGACAAGCCTTATCCGGACTGTCCCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | TTGAATAGGGGTTCATTGTCCTGGATAGAGTTGCAATaGGGTAACTGTAAGCCCCGACAATGTGACACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LNRGSLSWIELQ*GNCKPRQCDTA Trigger: AGCAGTGTCACATTGTCGGGGCTTACAGTTACCCCATTGCAACTCTATCCAGGACAATGAACCCCTATTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTATCACAGCTACGATCACAGACCATAAAAATTAACAAGGCTCGTCCTTCCAAGGAGAGGATCATTTaGCACAGAGCCTCTCTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PLSQLRSQTIKINKARPSKERII*HRASLL Trigger: TAGCAGAGAGGCTCTGTGCAAAATGATCCTCTCCTT...GGAAGGACGAGCCTTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAACACATGGAAATACATTCAGCCTGCTAGACCACGCCAGTAAATACACAGCAGCTGAACACACATCTTaGTGGTCCCAGGAAACCATT | + |
|
Preference number: 3 (lower is better) Translates to: ETHGNTFSLLDHASKYTAAEHTS*WSQETI Trigger: AATGGTTTCCTGGGACCACAAAGATGTGTGTTCAGC...TGCTGTGTATTTACTGGCGTGGTCTAGCAGGCTGAATGTATTTCCATGTGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | CTGAAGTTGCAGAATCATTGTCTTGAATGGGTGTGGTaGCTCACAGCCATAGTCTTAGCATTTCAGAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LKLQNHCLEWVW*LTAIVLAFQRM Trigger: CATCCTCTGAAATGCTAAGACTATGGCTGTGAGCCACCACACCCATTCAAGACAATGATTCTGCAACTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | CATCAGCCTCTGAAGTTGCAGAATCATTGTCTTGAATaGGTGTGGTGGCTCACAGCCATAGTCTTAGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: HQPLKLQNHCLE*VWWLTAIVLAF Trigger: AAATGCTAAGACTATGGCTGTGAGCCACCACACCCATTCAAGACAATGATTCTGCAACTTCAGAGGCTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACAAGGCTCGTCCTAAGGAGAGGATCATTTaGCACAGAGCCTCTCTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SPLSQLRSQTIKINKARPKERII*HRASLL Trigger: TAGCAGAGAGGCTCTGTGCAAAATGATCCTCTCCTT...AGGACGAGCCTTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGCCATGACAAAGAGCACAATTTATTCTTTAGTCCCTTATCACAGCTACGATCCAAGCCTCTGGTTTTaGTGGTCATCTGTCAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: VAMTKSTIYSLVPYHSYDPSLWF*WSSVRL Trigger: GAGTCTGACAGATGACCACAAAAACCAGAGGCTTGG...ATCGTAGCTGTGATAAGGGACTAAAGAATAAATTGTGCTCTTTGTCATGGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAATTTTATACACGATTCTTGAATCTTGTGGAAATTTGGGCACGGCCTGACCCTTTCCCATTTGTCTaGGCAGCAATTTCAGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: AEFYTRFLNLVEIWARPDPFPFV*AAISAS Trigger: TGATGCTGAAATTGCTGCCAAGACAAATGGGAAAGG...GTCAGGCCGTGCCCAAATTTCCACAAGATTCAAGAATCGTGTATAAAATTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| 3UTR CCA 72 bp | CAAAAGGCTGAACCAAGCTCTCAGGCAATAAATTTATaGGGAAACACGACAGGCTCCTCATTAAAGCTATGT | + |
|
Preference number: 3 (lower is better) Translates to: QKAEPSSQAINL*GNTTGSSLKLC Trigger: ACATAGCTTTAATGAGGAGCCTGTCGTGTTTCCCCATAAATTTATTGCCTGAGAGCTTGGTTCAGCCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGATGCTTTCAAATGACTGTGATTTCTATCCCTTTAACATAGCTGGACTCACAGCTGAACACACATCTTaGTGGTCCCAGGAAACCATT | + |
|
Preference number: 3 (lower is better) Translates to: LMLSNDCDFYPFNIAGLTAEHTS*WSQETI Trigger: AATGGTTTCCTGGGACCACAAAGATGTGTGTTCAGC...TGTGAGTCCAGCTATGTTAAAGGGATAGAAATCACAGTCATTTGAAAGCATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR TCA 72 bp | AAAGCTAGCTGGGAAGAACACACCAGCAGATGTGACTaGATTATTTACAGAACAACACTGGTTACAGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: KASWEEHTSRCD*IIYRTTLVTDQ Trigger: TTGGTCTGTAACCAGTGTTGTTCTGTAAATAATTCAGTCACATCTGCTGGTGTGTTCTTCCCAGCTAGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR TCA 72 bp | CTATGTGTACGTTGGCTGAATTTTATACACGATTCTTaGATCTTGTGGAAATTTGGGCACGGCCTGACATCT | + |
|
Preference number: 3 (lower is better) Translates to: LCVRWLNFIHDS*ILWKFGHGLTS Trigger: AGATGTCAGGCCGTGCCCAAATTTCCACAAGATTCAAGAATCGTGTATAAAATTCAGCCAACGTACACATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | CTATTCAATTTCAAAAGACATGAATCTTCTGTAAACAATGGAGGGCAACTAGAGCCAAGCCTCTGGTTTTaGTGGTCATCTGTCAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: LFNFKRHESSVNNGGQLEPSLWF*WSSVRL Trigger: GAGTCTGACAGATGACCACAAAAACCAGAGGCTTGG...CTCTAGTTGCCCTCCATTGTTTACAGAAGATTCATGTCTTTTGAAATTGAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAGTTTGAGACTCTTGCCAACAGGGCAAAGAGCTATGGAGAAACACATGGAATGTCCCTGGTTTGTTaGATTTCTAAAGCATTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LKFETLANRAKSYGETHGMSLVC*ISKALE Trigger: TTCCAATGCTTTAGAAATCAAACAAACCAGGGACAT...TCCATGTGTTTCTCCATAGCTCTTTGCCCTGTTGGCAAGAGTCTCAAACTTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR-3UTR CAA 90 bp | TATACAGTCATTTCCAACACTAACATCCATTGGTGGGAATGCAGATCAGGAACAAAGCATTGGAAAATGTaGCACTCTGGAAATCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: YTVISNTNIHWWECRSGTKHWKM*HSGNQV Trigger: CACTTGATTTCCAGAGTGCAACATTTTCCAATGCTT...TGTTCCTGATCTGCATTCCCACCAATGGATGTTAGTGTTGGAAATGACTGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR TCA 72 bp | AAGAATAAACATACTCTGAAGCGGGGCTGGGTTGACTaGGTTATTTTTCCATATGTCTCCATGAGATATTTA | + |
|
Preference number: 3 (lower is better) Translates to: KNKHTLKRGWVD*VIFPYVSMRYL Trigger: TAAATATCTCATGGAGACATATGGAAAAATAACTCAGTCAACCCAGCCCCGCTTCAGAGTATGTTTATTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| 3UTR GCA 72 bp | AATAAATGTAGCACAGTAATGTTTCAAAGTAGTACGTaGAAATCTGGTCCACTACAAACGTTTGCATCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: NKCSTVMFQSST*KSGPLQTFASV Trigger: CACAGATGCAAACGTTTGTAGTGGACCAGATTTGCACGTACTACTTTGAAACATTACTGTGCTACATTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115130.3 |
||
| 3UTR CCA 72 bp | TACATGTCAAATAATCTAATGAAGAAACTGGTAAAGTaGAACGTTAGGAAGCAACAGTGTTGGAGAGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: YMSNNLMKKLVK*NVRKQQCWRGT Trigger: TGTTCCTCTCCAACACTGTTGCTTCCTAACGTTCCACTTTACCAGTTTCTTCATTAGATTATTTGACATGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGGCAGAGTGGAGCGGCTaGAGTCCCCTGCTCCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSLQPPERAKTQCEDCGLAEWSG*SPLLPC Trigger: GCACGGGAGCAGGGGACTCCAGCCGCTCCACTCTGC...CAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGCAGAATGGTGGTGGCCGCCTaGCTGGCCAGCCTCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ACSLQSELRLSVRTVGCRMVVAA*LASLSS Trigger: GGACGAGAGGCTGGCCAGCCAGGCGGCCACCACCAT...TCTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| 3UTR CAA 72 bp | GGTGGCCTTCCAAGGCTCTCAGCACAGACCCGCAGGTaGCTGGGGTCTTCCTGTACTGGGCCCTCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLPRLSAQTRR*LGSSCTGPSFW Trigger: CCAGAAGGAGGGCCCAGTACAGGAAGACCCCAGCAACCTGCGGGTCTGTGCTGAGAGCCTTGGAAGGCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGCAGGGTTTGCCTTGCAGGTaGCCGCTGGTGAGCGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQPPERAKTQCEDCGLQGLPCR*PLVSVR Trigger: CCGCACGCTCACCAGCGGTCACCTGCAAGGCAAACC...CTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGCAGCACGCTCACACATGGTaGTGGCCGCCTGGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLQPPERAKTQCEDCGLQHAHTW*WPPGWP Trigger: TGGCCAGCCAGGCGGCCACCACCATGTGTGAGCGTG...CTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGACCCACGCTCACACATaGTGGTGGCCGCCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSLQPPERAKTQCEDCGLTHAHT*WWPPGW Trigger: CCAGCCAGGCGGCCACCACCATGTGTGAGCGTGGGT...CAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGCTCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGATGCACCCATGCTCACAGACCACCCCTCAGCTTCAAATGCCCAGCAGGTGCGGGGGCTCGAGTaGCTGGCAGGACAGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QQDAPMLTDHPSASNAQQVRGLE*LAGQLV Trigger: CACCAGCTGTCCTGCCAGCCACTCGAGCCCCCGCAC...CTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAGCATGGGTGCATCTTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCGTCCTTCCCTCTGACTTCATGGGCCTCATCCTTACCTGAGGTCTTTTGTGCAGGTGACCGCTGGTaGGCGTGCGGGGGCTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSFPLTSWASSLPEVFCAGDRW*ACGGSS Trigger: ACTCGAGCCCCCGCACGCTCACCAGCGGTCACCTGC...ACAAAAGACCTCAGGTAAGGATGAGGCCCATGAAGTCAGAGGGAAGGACGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGATGCACCCATGCTCACAGACCACCCCTCAGCTTCAAATGCCCAGCAGAGGGTTTGCCTTGCAGGTaGCCGCTGGTGAGCGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ARCTHAHRPPLSFKCPAEGLPCR*PLVSVR Trigger: CCGCACGCTCACCAGCGGTCACCTGCAAGGCAAACC...CTCTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAGCATGGGTGCATCTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTTCTCTACAGCAGTTCTGAAAAGGACCAAGTTGGGAGCGCTGAGGGTTCCGCTCACACATGGTGGTaGCCGCCTGGCTGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLYSSSEKDQVGSAEGSAHTWW*PPGWPA Trigger: GGCTGGCCAGCCAGGCGGCCACCACCATGTGTGAGC...GGAACCCTCAGCGCTCCCAACTTGGTCCTTTTCAGAACTGCTGTAGAGAAACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGCAGAGACAGGGAAGCGACTTaGATGACCAGCTGGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ACSLQSELRLSVRTVGCRDREAT*MTSWAK Trigger: TTTTGCCCAGCTGGTCATTCAAGTCGCTTCCCTGTC...TCTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTTCTCTACAGCAGTTCTGAAAAGGACCAAGTTGGGAGCGCTGAGGGTTCCCACGCTCACACATGGTaGTGGCCGCCTGGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLYSSSEKDQVGSAEGSHAHTW*WPPGWP Trigger: TGGCCAGCCAGGCGGCCACCACCATGTGTGAGCGTG...GGAACCCTCAGCGCTCCCAACTTGGTCCTTTTCAGAACTGCTGTAGAGAAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | TCTACAGCAGTTCTGAAAAGGACCAAGTTGGGAGCGCTGAGGGTTCCGAAAGGATGGCAGGACAGCTGGTaGGCAGGTTCTGGCCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: STAVLKRTKLGALRVPKGWQDSW*AGSGHR Trigger: GCGGTGGCCAGAACCTGCCCACCAGCTGTCCTGCCA...TCCTTTCGGAACCCTCAGCGCTCCCAACTTGGTCCTTTTCAGAACTGCTGTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | GGACTGTGGGCTGCAGAAACCAAGAACTCATCTGCACCTGTGGGGACAGCGGCCGACCCTTCGAGCCTTTaGATCTCCTCAGCTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GLWAAETKNSSAPVGTAADPSSL*ISSAVT Trigger: AGTGACAGCTGAGGAGATCCAAAGGCTCGAAGGGTC...GGCCGCTGTCCCCACAGGTGCAGATGAGTTCTTGGTTTCTGCAGCCCACAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| CDS-3UTR TCA 90 bp | TCCCCAACGCCACTGATGACGCTCTGCAGAGTGGAGCGGCTGGAGTCCCCTGCTTTCCAGTGTTTGATCTaGCAGGGAAGCGACTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPTPLMTLCRVERLESPAFQCLI*QGSDLN Trigger: ATTCAAGTCGCTTCCCTGTCAGATCAAACACTGGAA...AGCAGGGGACTCCAGCCGCTCCACTCTGCAGAGCGTCATCAGTGGCGTTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGCAGAGTCACTTCCAGTGTTTaGTCTGACAGGGAAGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: ACSLQSELRLSVRTVGCRVTSSV*SDREAT Trigger: AGTCGCTTCCCTGTCAGATCAAACACTGGAAGTGAC...TCTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| CDS-3UTR GCA 90 bp | ACTCAGTGTGAGGACTGTGGGCTGCAGAAACCAAGAACTCATCTGCACCTGTGGGCGGCTGGAGTCCCCTaGTCCCGTGCTGTTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TQCEDCGLQKPRTHLHLWAAGVP*SRAVDE Trigger: TTCATCAACAGCACGGGAGCAGGGGACTCCAGCCGC...CCACAGGTGCAGATGAGTTCTTGGTTTCTGCAGCCCACAGTCCTCACACTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCGTCCTTCCCTCTGACTTCATGGGCCTCATCCTTACCTGAGGTCTTTTGTAAAGGGAGGGCCTGCTaGCAAGAGGCTGGCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSSFPLTSWASSLPEVFCKGRAC*QEAGRE Trigger: TTCCCTGCCAGCCTCTTGCCAGCAGGCCCTCCCTTT...ACAAAAGACCTCAGGTAAGGATGAGGCCCATGAAGTCAGAGGGAAGGACGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031810.15 |
||
| CDS-3UTR CCA 90 bp | GCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGCAGAAGGGGTTCATTGTCCTaGATAGAGTTGCAATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ACSLQSELRLSVRTVGCRRGSLS*IELQWG Trigger: ACCCCATTGCAACTCTATCCAGGACAATGAACCCCT...TCTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | TCACCTGTGTGTCCCCTTGTCCGTGTGAAGCTGATGCTTTCAAATGACTGTGATGGCTGGCAGGACAGCTaGTGGGCAGGTTCTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPVCPLVRVKLMLSNDCDGWQDS*WAGSGH Trigger: GTGGCCAGAACCTGCCCACCAGCTGTCCTGCCAGCC...ATCACAGTCATTTGAAAGCATCAGCTTCACACGGACAAGGGGACACACAGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR TCA 90 bp | CTCACAGACCACCCCTCAGCTTCAAATGCCCAGCAGAGCCTGCAGCCTCCAGAGTTCCAGTGTTTGATCTaGCAGGGAAGCGACTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LTDHPSASNAQQSLQPPEFQCLI*QGSDLN Trigger: ATTCAAGTCGCTTCCCTGTCAGATCAAACACTGGAA...CTCTGGAGGCTGCAGGCTCTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| CDS-3UTR TCA 90 bp | TCTACAGCAGTTCTGAAAAGGACCAAGTTGGGAGCGCTGAGGGTTCCGAAAGGACTGGCAGGGAACCAGTaGCCAGTCCTTCTGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: STAVLKRTKLGALRVPKGLAGNQ*PVLLGT Trigger: AGTTCCCAGAAGGACTGGTCACTGGTTCCCTGCCAG...TCCTTTCGGAACCCTCAGCGCTCCCAACTTGGTCCTTTTCAGAACTGCTGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031810.15 |
||
| CDS-3UTR GCA 90 bp | TTTTGTGGTCATCTGTCAGACTCCTTCCTGAGTGAAGGGAGTGGAGCTGCAGACTCGGCTAGGGTTGTCTaGTGGTCCCTGGTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FCGHLSDSFLSEGSGAADSARVV*WSLVLF Trigger: GAAGAGGACCAGGGACCAGCAGACAACCCTAGCCGA...GTCTGCAGCTCCACTCCCTTCACTCAGGAAGGAGTCTGACAGATGACCACAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031810.15 |
||
| CDS-3UTR CCA 90 bp | GAAACACATGGAAATACATTCAGCCTGCTAGACCACGCCAGTAAATACACAGCAATGGTGGTGGCCGCCTaGCTGGCCAGCCTCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ETHGNTFSLLDHASKYTAMVVAA*LASLSS Trigger: GGACGAGAGGCTGGCCAGCCAGGCGGCCACCACCAT...TGCTGTGTATTTACTGGCGTGGTCTAGCAGGCTGAATGTATTTCCATGTGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031810.15 |
||
| CDS-3UTR CCA 90 bp | TCTACAGCAGTTCTGAAAAGGACCAAGTTGGGAGCGCTGAGGGTTCCGAAAGGAGCTAGGGTTGTCTGCTaGTCCCTGGTCCTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: STAVLKRTKLGALRVPKGARVVC*SLVLFQ Trigger: CTGGAAGAGGACCAGGGACCAGCAGACAACCCTAGC...TCCTTTCGGAACCCTCAGCGCTCCCAACTTGGTCCTTTTCAGAACTGCTGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031810.15 |
||
| 3UTR CAA 72 bp | GGCTGGGTGACTGTTCCTCAGGGCTCCCTTTCCCATTaGTCTTGGCAGCAATTTCAGCATCAGCCTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GWVTVPQGSLSH*SWQQFQHQPLK Trigger: CTTCAGAGGCTGATGCTGAAATTGCTGCCAAGACAAATGGGAAAGGGAGCCCTGAGGAACAGTCACCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGATGCACCCATGCTCACAGACCACCCCTCAGCTTCAAATGCCCAGCAGAGTCTGTGGTATCCGTCTaGTCAGATACTCAGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARCTHAHRPPLSFKCPAESVVSV*SDTQDS Trigger: GGAATCCTGAGTATCTGACCAGACGGATACCACAGA...CTCTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAGCATGGGTGCATCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| CDS-3UTR CCA 90 bp | TGCACCCATGCTCACAGACCACCCCTCAGCTTCAAATGCCCAGCAGAGCCTGCAATACCTTGGGTTCTGTaGTATCCGTCTGGTCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: CTHAHRPPLSFKCPAEPAIPWVL*YPSGQI Trigger: TATCTGACCAGACGGATACCACAGAACCCAAGGTAT...TGCAGGCTCTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAGCATGGGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGATGCACCCATGCTCACAGACCACCCCTCAGCTTCAAATGCCCAGCAGAGTGGATAGAGTTGCAATaGGGTAACTGTAAGCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ARCTHAHRPPLSFKCPAEWIELQ*GNCKPR Trigger: TCGGGGCTTACAGTTACCCCATTGCAACTCTATCCA...CTCTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAGCATGGGTGCATCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | ACACACATCTTTGTGGTCCCAGGAAACCATTTAAGGAGAGGATCATTTTGCACAGCTCACACATGGTGGTaGCCGCCTGGCTGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: THIFVVPGNHLRRGSFCTAHTWW*PPGWPA Trigger: GGCTGGCCAGCCAGGCGGCCACCACCATGTGTGAGC...TGTGCAAAATGATCCTCTCCTTAAATGGTTTCCTGGGACCACAAAGATGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | GAAACACATGGAAATACATTCAGCCTGCTAGACCACGCCAGTAAATACACAGCAGGCTGGCAGGACAGCTaGTGGGCAGGTTCTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ETHGNTFSLLDHASKYTAGWQDS*WAGSGH Trigger: GTGGCCAGAACCTGCCCACCAGCTGTCCTGCCAGCC...TGCTGTGTATTTACTGGCGTGGTCTAGCAGGCTGAATGTATTTCCATGTGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031810.15 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGATGCACCCATGCTCACAGACCACCCCTCAGCTTCAAATGCCCAGCAGTTCAGCATCAGCCTCTaGAGTTGCAGAATCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QQDAPMLTDHPSASNAQQFSISL*SCRIIV Trigger: GACAATGATTCTGCAACTTCAGAGGCTGATGCTGAA...CTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAGCATGGGTGCATCTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | CGAATGAAGACAGTGATTTGCAAGGAGCCTGGGGAAAGGGGCAGGCCATGGAGCATACCTTGGGTTCTGTaGTATCCGTCTGGTCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: RMKTVICKEPGERGRPWSIPWVL*YPSGQI Trigger: TATCTGACCAGACGGATACCACAGAACCCAAGGTAT...GCTCCATGGCCTGCCCCTTTCCCCAGGCTCCTTGCAAATCACTGTCTTCATTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115130.3 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCTTTGCAGAGTGGAGCGGCTaGAGTCCCCTGCTCCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAGFSEAGCHDKEHNLFFAEWSG*SPLLPC Trigger: GCACGGGAGCAGGGGACTCCAGCCGCTCCACTCTGC...AAAGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCAGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGATGCACCCATGCTCACAGACCACCCCTCAGCTTCAAATGCCCAGCAGAGATGATGATCTTGCCGTaGGCGTTCTTGTACTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARCTHAHRPPLSFKCPAEMMILP*AFLYSR Trigger: TCTTGAGTACAAGAACGCCCACGGCAAGATCATCAT...CTCTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAGCATGGGTGCATCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | GTTGCCATGACAAAGAGCACAATTTATTCTTTAGTCCCTTATCACAGCTACGATGTGCGGGGGCTCGAGTaGCTGGCAGGACAGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VAMTKSTIYSLVPYHSYDVRGLE*LAGQLV Trigger: CACCAGCTGTCCTGCCAGCCACTCGAGCCCCCGCAC...ATCGTAGCTGTGATAAGGGACTAAAGAATAAATTGTGCTCTTTGTCATGGCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR TCA 90 bp | CTATTCAATTTCAAAAGACATGAATCTTCTGTAAACAATGGAGGGCAACTAGAGGCAGGTGACCGCTGGTaGGCGTGCGGGGGCTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFNFKRHESSVNNGGQLEAGDRW*ACGGSS Trigger: ACTCGAGCCCCCGCACGCTCACCAGCGGTCACCTGC...CTCTAGTTGCCCTCCATTGTTTACAGAAGATTCATGTCTTTTGAAATTGAATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGATGCACCCATGCTCACAGACCACCCCTCAGCTTCAAATGCCCAGCAGAGGATAAGGCTTGTCTTTaGCATTGGGTTCTTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARCTHAHRPPLSFKCPAEDKACL*HWVLLS Trigger: AGAAAGAAGAACCCAATGGCAAAGACAAGCCTTATC...CTCTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAGCATGGGTGCATCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | AATGGATGTCAGTCATCTAGCAATTCAATTAATGCCGATTCAAAATTCCGGCCAACCCACGCTCACACATaGTGGTGGCCGCCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NGCQSSSNSINADSKFRPTHAHT*WWPPGW Trigger: CCAGCCAGGCGGCCACCACCATGTGTGAGCGTGGGT...TGGCCGGAATTTTGAATCGGCATTAATTGAATTGCTAGATGACTGACATCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | TATACAGTCATTTCCAACACTAACATCCATTGGTGGGAATGCAGATCAGGAACACTCAGCTGGCAGGGCTaGCATTTTGGGGCCACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: YTVISNTNIHWWECRSGTLSWQG*HFGATS Trigger: CGACGTGGCCCCAAAATGCCAGCCCTGCCAGCTGAG...TGTTCCTGATCTGCATTCCCACCAATGGATGTTAGTGTTGGAAATGACTGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031810.15 |
||
| CDS-3UTR TCA 90 bp | CGAGTCTTTTCCAGCAGAGTTATTCTGGTTCAGTCGGCTAGGGTTGTCTGCTGGCTTGACTTGACATGTTaGTACCTTGGGTTCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVFSSRVILVQSARVVCWLDLTC*YLGFCG Trigger: ACCACAGAACCCAAGGTATCAACATGTCAAGTCAAG...CCAGCAGACAACCCTAGCCGACTGAACCAGAATAACTCTGCTGGAAAAGACTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| CDS-3UTR TCA 90 bp | TCACCTGTGTGTCCCCTTGTCCGTGTGAAGCTGATGCTTTCAAATGACTGTGATGTCACTTCCAGTGTTTaGTCTGACAGGGAAGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: SPVCPLVRVKLMLSNDCDVTSSV*SDREAT Trigger: AGTCGCTTCCCTGTCAGATCAAACACTGGAAGTGAC...ATCACAGTCATTTGAAAGCATCAGCTTCACACGGACAAGGGGACACACAGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| CDS-3UTR GCA 90 bp | TCAGCTGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCTTTGCGGCTGGAGTCCCCTaGTCCCGTGCTGTTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SAGFSEAGCHDKEHNLFFAAGVP*SRAVDE Trigger: TTCATCAACAGCACGGGAGCAGGGGACTCCAGCCGC...AAAGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACAAGGCTCGTCCTGGGAAGCGACTTGAATaGCCAGCTGGGCAAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLSQLRSQTIKINKARPGKRLE*PAGQKW Trigger: CCACTTTTGCCCAGCTGGTCATTCAAGTCGCTTCCC...AGGACGAGCCTTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| CDS-3UTR TCA 90 bp | CTATTCAATTTCAAAAGACATGAATCTTCTGTAAACAATGGAGGGCAACTAGAGCTGGACAGGGCTGGGTaGCTGTTCCTCAGGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFNFKRHESSVNNGGQLELDRAG*LFLRAP Trigger: GGGAGCCCTGAGGAACAGTCACCCAGCCCTGTCCAG...CTCTAGTTGCCCTCCATTGTTTACAGAAGATTCATGTCTTTTGAAATTGAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | CTATTCAATTTCAAAAGACATGAATCTTCTGTAAACAATGGAGGGCAACTAGAGTGGCAGGACAGCTGGTaGGCAGGTTCTGGCCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: LFNFKRHESSVNNGGQLEWQDSW*AGSGHR Trigger: GCGGTGGCCAGAACCTGCCCACCAGCTGTCCTGCCA...CTCTAGTTGCCCTCCATTGTTTACAGAAGATTCATGTCTTTTGAAATTGAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS-3UTR TCA 90 bp | AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACAAGGCTCGTCCTGACAGGGAAGCGACTTaGATGACCAGCTGGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPLSQLRSQTIKINKARPDREAT*MTSWAK Trigger: TTTTGCCCAGCTGGTCATTCAAGTCGCTTCCCTGTC...AGGACGAGCCTTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| CDS-3UTR TCA 90 bp | GGCAATAAATTTATGGGGAAACACGACAGGCTCCTCATTAAAGCTATGTGTACGGACAGGGAAGCGACTTaGATGACCAGCTGGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GNKFMGKHDRLLIKAMCTDREAT*MTSWAK Trigger: TTTTGCCCAGCTGGTCATTCAAGTCGCTTCCCTGTC...CGTACACATAGCTTTAATGAGGAGCCTGTCGTGTTTCCCCATAAATTTATTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
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| CDS-3UTR TCA 90 bp | TCACCTGTGTGTCCCCTTGTCCGTGTGAAGCTGATGCTTTCAAATGACTGTGATTTCAGCATCAGCCTCTaGAGTTGCAGAATCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPVCPLVRVKLMLSNDCDFSISL*SCRIIV Trigger: GACAATGATTCTGCAACTTCAGAGGCTGATGCTGAA...ATCACAGTCATTTGAAAGCATCAGCTTCACACGGACAAGGGGACACACAGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR TCA 90 bp | GGCAATAAATTTATGGGGAAACACGACAGGCTCCTCATTAAAGCTATGTGTACGGACCCCCGGAAAGCATaGAGAGGTTTTCAAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GNKFMGKHDRLLIKAMCTDPRKA*RGFQTH Trigger: GTGGGTTTGAAAACCTCTTCATGCTTTCCGGGGGTC...CGTACACATAGCTTTAATGAGGAGCCTGTCGTGTTTCCCCATAAATTTATTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031810.15 |
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| CDS-3UTR TCA 90 bp | TCAGCTGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCTTTGGCCCCCGGAAAGCATaGAGAGGTTTTCAAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SAGFSEAGCHDKEHNLFFGPRKA*RGFQTH Trigger: GTGGGTTTGAAAACCTCTTCATGCTTTCCGGGGGCC...AAAGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCAGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTTCTCTACAGCAGTTCTGAAAAGGACCAAGTTGGGAGCGCTGAGGGTTCCGCTTGTCTTTGCCATTaGGTTCTTCTTTCTTTACGA | + |
|
Preference number: 4 (lower is better) Translates to: LFLYSSSEKDQVGSAEGSACLCH*VLLSLR Trigger: TCGTAAAGAAAGAAGAACCCAATGGCAAAGACAAGC...GGAACCCTCAGCGCTCCCAACTTGGTCCTTTTCAGAACTGCTGTAGAGAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | CAATGGAGGGCAACTAGAGCCTGCCAAGCCTCTGGTTTTTGTGGTCATCTGTCAGCTTGTCTTTGCCATTaGGTTCTTCTTTCTTTACGA | + |
|
Preference number: 4 (lower is better) Translates to: QWRATRACQASGFCGHLSACLCH*VLLSLR Trigger: TCGTAAAGAAAGAAGAACCCAATGGCAAAGACAAGC...TGACAGATGACCACAAAAACCAGAGGCTTGGCAGGCTCTAGTTGCCCTCCATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| 3UTR CAA 72 bp | TGTGGTCCCAGGAAACCATTTAAGGAGAGGATCATTTaGCACAGAGCCTCTCTGCTAAACCAGCAAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CGPRKPFKERII*HRASLLNQQDA Trigger: TGCATCTTGCTGGTTTAGCAGAGAGGCTCTGTGCAAAATGATCCTCTCCTTAAATGGTTTCCTGGGACCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| 3UTR CAA 72 bp | TTGTCTTGGCAGCAATTTCAGCATCAGCCTCTGAAGTaGCAGAATCATTGTCTTGAATGGGTGTGGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSWQQFQHQPLK*QNHCLEWVWWL Trigger: GAGCCACCACACCCATTCAAGACAATGATTCTGCAACTTCAGAGGCTGATGCTGAAATTGCTGCCAAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| CDS-3UTR TCA 90 bp | AAATTTATGGGGAAACACGACAGGCTCCTCATTAAAGCTATGTGTACGTTGGCTCCTTCTGGGAACTTCTaGGCTAAGACTTTCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: KFMGKHDRLLIKAMCTLAPSGNF*AKTFRP Trigger: GGGTCTGAAAGTCTTAGCTCAGAAGTTCCCAGAAGG...AGCCAACGTACACATAGCTTTAATGAGGAGCCTGTCGTGTTTCCCCATAAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031810.15 |
||
| CDS-3UTR CCA 90 bp | GACCACGCCAGTAAATACACAGCAATTCTAACAGCTTTGCCGAAACAGTCTCTGATGATGATCTTGCCGTaGGCGTTCTTGTACTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DHASKYTAILTALPKQSLMMILP*AFLYSR Trigger: TCTTGAGTACAAGAACGCCCACGGCAAGATCATCAT...CAGAGACTGTTTCGGCAAAGCTGTTAGAATTGCTGTGTATTTACTGGCGTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031810.15 |
||
| CDS-3UTR CCA 90 bp | AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACAAGGCTCGTCCTTTGTCTTCGAGCCTTTaGATCTCCTCAGCTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SPLSQLRSQTIKINKARPLSSSL*ISSAVT Trigger: AGTGACAGCTGAGGAGATCCAAAGGCTCGAAGACAA...AGGACGAGCCTTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | ACACACATCTTTGTGGTCCCAGGAAACCATTTAAGGAGAGGATCATTTTGCACATTGTCTTCGAGCCTTTaGATCTCCTCAGCTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: THIFVVPGNHLRRGSFCTLSSSL*ISSAVT Trigger: AGTGACAGCTGAGGAGATCCAAAGGCTCGAAGACAA...TGTGCAAAATGATCCTCTCCTTAAATGGTTTCCTGGGACCACAAAGATGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCTTTCCAGCAGAGTTATTCTaGTTCAGTCGGCTAGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SAGFSEAGCHDKEHNLFFPAELF*FSRLGL Trigger: CAACCCTAGCCGACTGAACCAGAATAACTCTGCTGG...AAAGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031810.15 |
||
| 3UTR CAA 72 bp | TCTTGCCGTGGGCGTTCTTGTACTCAAGAATGTCATTaGAATAGGGGTTCATTGTCCTGGATAGAGTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SCRGRSCTQECH*NRGSLSWIELQ Trigger: TTGCAACTCTATCCAGGACAATGAACCCCTATTCAAATGACATTCTTGAGTACAAGAACGCCCACGGCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
||
| CDS-3UTR TCA 90 bp | ACACACATCTTTGTGGTCCCAGGAAACCATTTAAGGAGAGGATCATTTTGCACACTTGACTTGACATGTTaGTACCTTGGGTTCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: THIFVVPGNHLRRGSFCTLDLTC*YLGFCG Trigger: ACCACAGAACCCAAGGTATCAACATGTCAAGTCAAG...TGTGCAAAATGATCCTCTCCTTAAATGGTTTCCTGGGACCACAAAGATGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| CDS-3UTR TCA 90 bp | GTTGCCATGACAAAGAGCACAATTTATTCTTTAGTCCCTTATCACAGCTACGATGTCACTTCCAGTGTTTaGTCTGACAGGGAAGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: VAMTKSTIYSLVPYHSYDVTSSV*SDREAT Trigger: AGTCGCTTCCCTGTCAGATCAAACACTGGAAGTGAC...ATCGTAGCTGTGATAAGGGACTAAAGAATAAATTGTGCTCTTTGTCATGGCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
||
| CDS-3UTR CCA 90 bp | GACAAAGAGCACAATTTATTCTTTAGTCCCTTATCACAGCTACGATCACAGACCTCTGTGGTATCCGTCTaGTCAGATACTCAGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: DKEHNLFFSPLSQLRSQTSVVSV*SDTQDS Trigger: GGAATCCTGAGTATCTGACCAGACGGATACCACAGA...GGTCTGTGATCGTAGCTGTGATAAGGGACTAAAGAATAAATTGTGCTCTTTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| 3UTR CAA 72 bp | GCTATGTGTACGTTGGCTGAATTTTATACACGATTCTaGAATCTTGTGGAAATTTGGGCACGGCCTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: AMCTLAEFYTRF*NLVEIWARPDI Trigger: GATGTCAGGCCGTGCCCAAATTTCCACAAGATTCAAGAATCGTGTATAAAATTCAGCCAACGTACACATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
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| CDS-3UTR CCA 90 bp | TCAGCTGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCTTTGACATGTTGATACCTTaGGTTCTGTGGTATCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAGFSEAGCHDKEHNLFFDMLIP*VLWYPS Trigger: AGACGGATACCACAGAACCCAAGGTATCAACATGTC...AAAGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCAGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| CDS-3UTR CCA 90 bp | GTTGCCATGACAAAGAGCACAATTTATTCTTTAGTCCCTTATCACAGCTACGATTGGATAGAGTTGCAATaGGGTAACTGTAAGCCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VAMTKSTIYSLVPYHSYDWIELQ*GNCKPR Trigger: TCGGGGCTTACAGTTACCCCATTGCAACTCTATCCA...ATCGTAGCTGTGATAAGGGACTAAAGAATAAATTGTGCTCTTTGTCATGGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS-3UTR CCA 90 bp | AATGGATGTCAGTCATCTAGCAATTCAATTAATGCCGATTCAAAATTCCGGCCAAGGGGTTCATTGTCCTaGATAGAGTTGCAATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NGCQSSSNSINADSKFRPRGSLS*IELQWG Trigger: ACCCCATTGCAACTCTATCCAGGACAATGAACCCCT...TGGCCGGAATTTTGAATCGGCATTAATTGAATTGCTAGATGACTGACATCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| 3UTR CAA 72 bp | GACCACGCCAGTAAATACACAGCAATTCTAACAGCTTaGCCGAAACAGTCTCTGTACGTATATACAGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: DHASKYTAILTA*PKQSLYVYTVI Trigger: AATGACTGTATATACGTACAGAGACTGTTTCGGCAAAGCTGTTAGAATTGCTGTGTATTTACTGGCGTGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
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| CDS-3UTR TCA 90 bp | GTAATGTTTCAAAGTAGTACGTGCAAATCTGGTCCACTACAAACGTTTGCATCTCTTGACTTGACATGTTaGTACCTTGGGTTCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VMFQSSTCKSGPLQTFASLDLTC*YLGFCG Trigger: ACCACAGAACCCAAGGTATCAACATGTCAAGTCAAG...AGATGCAAACGTTTGTAGTGGACCAGATTTGCACGTACTACTTTGAAACATTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115130.3 |
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| CDS-3UTR TCA 90 bp | GTTGCCATGACAAAGAGCACAATTTATTCTTTAGTCCCTTATCACAGCTACGATTTCCAGTGTTTGATCTaGCAGGGAAGCGACTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VAMTKSTIYSLVPYHSYDFQCLI*QGSDLN Trigger: ATTCAAGTCGCTTCCCTGTCAGATCAAACACTGGAA...ATCGTAGCTGTGATAAGGGACTAAAGAATAAATTGTGCTCTTTGTCATGGCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| CDS-3UTR GCA 90 bp | ACACACATCTTTGTGGTCCCAGGAAACCATTTAAGGAGAGGATCATTTTGCACAGATAAGGCTTGTCTTTaGCATTGGGTTCTTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: THIFVVPGNHLRRGSFCTDKACL*HWVLLS Trigger: AGAAAGAAGAACCCAATGGCAAAGACAAGCCTTATC...TGTGCAAAATGATCCTCTCCTTAAATGGTTTCCTGGGACCACAAAGATGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS-3UTR CCA 90 bp | CTGATGCTTTCAAATGACTGTGATTTCTATCCCTTTAACATAGCTGGACTCACAGACATGTTGATACCTTaGGTTCTGTGGTATCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LMLSNDCDFYPFNIAGLTDMLIP*VLWYPS Trigger: AGACGGATACCACAGAACCCAAGGTATCAACATGTC...TGTGAGTCCAGCTATGTTAAAGGGATAGAAATCACAGTCATTTGAAAGCATCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| CDS-3UTR CCA 90 bp | GTTGCCATGACAAAGAGCACAATTTATTCTTTAGTCCCTTATCACAGCTACGATGACATGTTGATACCTTaGGTTCTGTGGTATCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VAMTKSTIYSLVPYHSYDDMLIP*VLWYPS Trigger: AGACGGATACCACAGAACCCAAGGTATCAACATGTC...ATCGTAGCTGTGATAAGGGACTAAAGAATAAATTGTGCTCTTTGTCATGGCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| CDS-3UTR CCA 90 bp | AATAAATGTAGCACAGTAATGTTTCAAAGTAGTACGTGCAAATCTGGTCCACTATCTGTGGTATCCGTCTaGTCAGATACTCAGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: NKCSTVMFQSSTCKSGPLSVVSV*SDTQDS Trigger: GGAATCCTGAGTATCTGACCAGACGGATACCACAGA...TAGTGGACCAGATTTGCACGTACTACTTTGAAACATTACTGTGCTACATTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115130.3 |
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| 3UTR CAA 72 bp | TCTTGTACTCAAGAATGTCATTTGAATAGGGGTTCATaGTCCTGGATAGAGTTGCAATGGGGTAACTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCTQECHLNRGS*SWIELQWGNCK Trigger: CTTACAGTTACCCCATTGCAACTCTATCCAGGACAATGAACCCCTATTCAAATGACATTCTTGAGTACAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140211.8 |
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| CDS-3UTR TCA 90 bp | CTATTCAATTTCAAAAGACATGAATCTTCTGTAAACAATGGAGGGCAACTAGAGCTTGACTTGACATGTTaGTACCTTGGGTTCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFNFKRHESSVNNGGQLELDLTC*YLGFCG Trigger: ACCACAGAACCCAAGGTATCAACATGTCAAGTCAAG...CTCTAGTTGCCCTCCATTGTTTACAGAAGATTCATGTCTTTTGAAATTGAATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000140211.8 |
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| CDS-3UTR CCA 90 bp | AATAAATGTAGCACAGTAATGTTTCAAAGTAGTACGTGCAAATCTGGTCCACTAGACATGTTGATACCTTaGGTTCTGTGGTATCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NKCSTVMFQSSTCKSGPLDMLIP*VLWYPS Trigger: AGACGGATACCACAGAACCCAAGGTATCAACATGTC...TAGTGGACCAGATTTGCACGTACTACTTTGAAACATTACTGTGCTACATTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115130.3 |
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| 3UTR CAA 72 bp | AAACACGACAGGCTCCTCATTAAAGCTATGTGTACGTaGGCTGAATTTTATACACGATTCTTGAATCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KHDRLLIKAMCT*AEFYTRFLNLV Trigger: CACAAGATTCAAGAATCGTGTATAAAATTCAGCCAACGTACACATAGCTTTAATGAGGAGCCTGTCGTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000140211.8 |
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| CDS-3UTR CAA 90 bp | AGCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGCAGGAAGTTGCAGAATCATaGTCTTCGAGCCTTTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SLQPPERAKTQCEDCGLQEVAES*SSSLWI Trigger: GATCCAAAGGCTCGAAGACAATGATTCTGCAACTTC...CTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS-3UTR CAA 90 bp | GCCTGCAGCCTCCAGAGCGAGCTAAGACTCAGTGTGAGGACTGTGGGCTGCAGATTGCCGTGGGCGTTCTaGTACTCAAGAATGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: ACSLQSELRLSVRTVGCRLPWAF*YSRMSF Trigger: AAATGACATTCTTGAGTACAAGAACGCCCACGGCAA...TCTGCAGCCCACAGTCCTCACACTGAGTCTTAGCTCGCTCTGGAGGCTGCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS-3UTR CAA 90 bp | CAGCAAGATGCACCCATGCTCACAGACCACCCCTCAGCTTCAAATGCCCAGCAGTTCTTTACGAGCCCTTaGTCTACATCCAGTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QQDAPMLTDHPSASNAQQFFTSP*STSSSP Trigger: TGGGGAACTGGATGTAGACAAAGGGCTCGTAAAGAA...CTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAGCATGGGTGCATCTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS-3UTR CAA 90 bp | GCAAGATGCACCCATGCTCACAGACCACCCCTCAGCTTCAAATGCCCAGCAGAGGGCTTGTCTTTGCCATaGGGTTCTTCTTTCTTTACG | + |
|
Preference number: 5 (lower is better) Translates to: ARCTHAHRPPLSFKCPAEGLSLP*GSSFFT Trigger: CGTAAAGAAAGAAGAACCCAATGGCAAAGACAAGCC...CTCTGCTGGGCATTTGAAGCTGAGGGGTGGTCTGTGAGCATGGGTGCATCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS-3UTR CAA 90 bp | CAGACAGAGACTTCCAAAACAGAATTGGGTGTAGAGGTCTACCTCCTGACTGGCGGGGTAAATCTCCACTaGTTCTCAGCTGGCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QTETSKTELGVEVYLLTGGVNLH*FSAGRA Trigger: AGCCCTGCCAGCTGAGAACAAGTGGAGATTTACCCC...GCCAGTCAGGAGGTAGACCTCTACACCCAATTCTGTTTTGGAAGTCTCTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031810.15 |
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| CDS-3UTR CAA 90 bp | ACTCAGTGTGAGGACTGTGGGCTGCAGAAACCAAGAACTCATCTGCACCTGTGGGAAGTTGCAGAATCATaGTCTTCGAGCCTTTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: TQCEDCGLQKPRTHLHLWEVAES*SSSLWI Trigger: GATCCAAAGGCTCGAAGACAATGATTCTGCAACTTC...CCACAGGTGCAGATGAGTTCTTGGTTTCTGCAGCCCACAGTCCTCACACTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS TCA 90 bp | CTGAGTTGTGAGGCACAGGCAGTATCCAGTCTTGACTTGACATGTTaGTACCTTGGGTTCTGTGGTATCCGTCTGGTCAGATACTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSCEAQAVSSLDLTC*YLGFCGIRLVRYSG Trigger: TCCTGAGTATCTGACCAGACGGATACCACAGAACCCAAGGTATCAACATGTCAAGTCAAGACTGGATACTGCCTGTGCCTCACAACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115130.3 |
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| CDS-3UTR CAA 90 bp | TCTGCTAAACCAGCAAGATGCACCCATGCTCACAGACCACCCCTCAGCTTCAAACATCAGCCTCTGAAGTaGCAGAATCATTGTCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SAKPARCTHAHRPPLSFKHQPLK*QNHCLR Trigger: TCGAAGACAATGATTCTGCAACTTCAGAGGCTGATG...TTTGAAGCTGAGGGGTGGTCTGTGAGCATGGGTGCATCTTGCTGGTTTAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS-3UTR CAA 90 bp | TTTTGTGGTCATCTGTCAGACTCCTTCCTGAGTGAAGGGAGTGGAGCTGCAGACCATCAGCCTCTGAAGTaGCAGAATCATTGTCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: FCGHLSDSFLSEGSGAADHQPLK*QNHCLR Trigger: TCGAAGACAATGATTCTGCAACTTCAGAGGCTGATG...GTCTGCAGCTCCACTCCCTTCACTCAGGAAGGAGTCTGACAGATGACCACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS-3UTR CAA 90 bp | CAGACAGAGACTTCCAAAACAGAATTGGGTGTAGAGGTCTACCTCCTGACTGGCTTGTCCTGGATAGAGTaGCAATGGGGTAACTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: QTETSKTELGVEVYLLTGLSWIE*QWGNCK Trigger: CTTACAGTTACCCCATTGCAACTCTATCCAGGACAA...GCCAGTCAGGAGGTAGACCTCTACACCCAATTCTGTTTTGGAAGTCTCTGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031810.15 |
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| CDS-3UTR CAA 90 bp | TCTACAGCAGTTCTGAAAAGGACCAAGTTGGGAGCGCTGAGGGTTCCGAAAGGATTGAATAGGGGTTCATaGTCCTGGATAGAGTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: STAVLKRTKLGALRVPKGLNRGS*SWIELQ Trigger: TTGCAACTCTATCCAGGACAATGAACCCCTATTCAA...TCCTTTCGGAACCCTCAGCGCTCCCAACTTGGTCCTTTTCAGAACTGCTGTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS-3UTR CAA 90 bp | TCACCTGTGTGTCCCCTTGTCCGTGTGAAGCTGATGCTTTCAAATGACTGTGATCCTTTCCCATTTGTCTaGGCAGCAATTTCAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SPVCPLVRVKLMLSNDCDPFPFV*AAISAS Trigger: TGATGCTGAAATTGCTGCCAAGACAAATGGGAAAGG...ATCACAGTCATTTGAAAGCATCAGCTTCACACGGACAAGGGGACACACAGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS-3UTR CAA 90 bp | TCTACAGCAGTTCTGAAAAGGACCAAGTTGGGAGCGCTGAGGGTTCCGAAAGGAACTCAAGAATGTCATTaGAATAGGGGTTCATTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: STAVLKRTKLGALRVPKGTQECH*NRGSLS Trigger: GGACAATGAACCCCTATTCAAATGACATTCTTGAGT...TCCTTTCGGAACCCTCAGCGCTCCCAACTTGGTCCTTTTCAGAACTGCTGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS-3UTR CAA 90 bp | GACCACGCCAGTAAATACACAGCAATTCTAACAGCTTTGCCGAAACAGTCTCTGTTGAATAGGGGTTCATaGTCCTGGATAGAGTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: DHASKYTAILTALPKQSLLNRGS*SWIELQ Trigger: TTGCAACTCTATCCAGGACAATGAACCCCTATTCAA...CAGAGACTGTTTCGGCAAAGCTGTTAGAATTGCTGTGTATTTACTGGCGTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031810.15 |
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| CDS TCA 90 bp | TCTCAATGTATTTGGTCATGCTGTTACCAGTATCCAGTCTTGACTTaGCATGTTGATACCTTGGGTTCTGTGGTATCCGTCTGGTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SQCIWSCCYQYPVLT*HVDTLGSVVSVWSD Trigger: ATCTGACCAGACGGATACCACAGAACCCAAGGTATCAACATGTCAAGTCAAGACTGGATACTGGTAACAGCATGACCAAATACATTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 ENSMUST00000133373.8 ENSMUST00000140211.8 ENSMUST00000169422.8 |
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| CDS-3UTR CAA 90 bp | TCAGCTGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCTTTTTCTTTACGAGCCCTTaGTCTACATCCAGTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SAGFSEAGCHDKEHNLFFFFTSP*STSSSP Trigger: TGGGGAACTGGATGTAGACAAAGGGCTCGTAAAGAA...AAAGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCAGCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS-3UTR CAA 90 bp | ACACACATCTTTGTGGTCCCAGGAAACCATTTAAGGAGAGGATCATTTTGCACAGGCTTGTCTTTGCCATaGGGTTCTTCTTTCTTTACG | + |
|
Preference number: 5 (lower is better) Translates to: THIFVVPGNHLRRGSFCTGLSLP*GSSFFT Trigger: CGTAAAGAAAGAAGAACCCAATGGCAAAGACAAGCC...TGTGCAAAATGATCCTCTCCTTAAATGGTTTCCTGGGACCACAAAGATGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS-3UTR CAA 90 bp | TATACAGTCATTTCCAACACTAACATCCATTGGTGGGAATGCAGATCAGGAACATTGCCGTGGGCGTTCTaGTACTCAAGAATGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: YTVISNTNIHWWECRSGTLPWAF*YSRMSF Trigger: AAATGACATTCTTGAGTACAAGAACGCCCACGGCAA...TGTTCCTGATCTGCATTCCCACCAATGGATGTTAGTGTTGGAAATGACTGTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031810.15 |
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| CDS-3UTR CAA 90 bp | AATGGATGTCAGTCATCTAGCAATTCAATTAATGCCGATTCAAAATTCCGGCCATTGTCCTGGATAGAGTaGCAATGGGGTAACTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: NGCQSSSNSINADSKFRPLSWIE*QWGNCK Trigger: CTTACAGTTACCCCATTGCAACTCTATCCAGGACAA...TGGCCGGAATTTTGAATCGGCATTAATTGAATTGCTAGATGACTGACATCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS-3UTR CAA 90 bp | TCAGCTGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCTTTACTCAAGAATGTCATTaGAATAGGGGTTCATTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAGFSEAGCHDKEHNLFFTQECH*NRGSLS Trigger: GGACAATGAACCCCTATTCAAATGACATTCTTGAGT...AAAGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCAGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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| CDS TCA 72 bp | CAGAGTTATTCTGGTTCAGTCGGCCCCCGGAAAGCATaGAGAGGTTTTCAAACCCACGCTCACACATGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QSYSGSVGPRKA*RGFQTHAHTWW Trigger: CCACCATGTGTGAGCGTGGGTTTGAAAACCTCTTCATGCTTTCCGGGGGCCGACTGAACCAGAATAACTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115131.8 |
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| CDS CCA 72 bp | GCAGCCACCTTCGAGTCTTTTCCAGCAGAGTTATTCTaGTTCAGTCGGCCCCCGGAAAGCATGAAGAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: AATFESFPAELF*FSRPPESMKRF Trigger: AAACCTCTTCATGCTTTCCGGGGGCCGACTGAACCAGAATAACTCTGCTGGAAAAGACTCGAAGGTGGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115131.8 |
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| CDS TCA 72 bp | GAGGCACAGGCAGTATCCAGTCTTGACTTGACATGTTaGTACCTTGGGTTCTGTGGTATCCGTCTGGTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: EAQAVSSLDLTC*YLGFCGIRLVR Trigger: TCTGACCAGACGGATACCACAGAACCCAAGGTATCAACATGTCAAGTCAAGACTGGATACTGCCTGTGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115130.3 |
||
| CDS CAA 72 bp | TTGTCTTGGCAGCAATTTCAGCATCAGCCTCTGAAGTaGCAGAATCATTGTCTTCGAGCCTTTGGATCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSWQQFQHQPLK*QNHCLRAFGSP Trigger: AGGAGATCCAAAGGCTCGAAGACAATGATTCTGCAACTTCAGAGGCTGATGCTGAAATTGCTGCCAAGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031810.15 ENSMUST00000115131.8 |
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