RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP350 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033671

Ensembl transcript IDs: ENSMUST00000124495.3, ENSMUST00000129865.9, ENSMUST00000138762.8

Found 517 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGCAGGGGTGGGACCAGGGCGGAGGAACAGCCCGCAGCAGTCCTaGAGCCTCGTCTTCACTGGGTTCTGCCCAGACAGGAAAATTAAA +
Preference number: 1 (lower is better)
Translates to: RAGVGPGRRNSPQQS*SLVFTGFCPDRKIK
Trigger: TTTAATTTTCCTGTCTGGGCAGAACCCAGTGAAGACGAGGCTCCAGGACTGCTGCGGGCTGTTCCTCCGCCCTGGTCCCACCCCTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR TCA 90 bp CCACACCCTAGGGCTTCTGTGCAGACGTCTAAGGGCTGCAGGGGGTaGCTATTGGCTGAAGATGGCCTGATGATCAGGCTATTTACACAC +
Preference number: 1 (lower is better)
Translates to: PHPRASVQTSKGCRG*LLAEDGLMIRLFTH
Trigger: GTGTGTAAATAGCCTGATCATCAGGCCATCTTCAGCCAATAGTCACCCCCTGCAGCCCTTAGACGTCTGCACAGAAGCCCTAGGGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR TCA 90 bp AGGTTAGGACGGCCACTGCCACGATCTCGGCACTGTCCAGGTCGCTaGGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATG +
Preference number: 1 (lower is better)
Translates to: RLGRPLPRSRHCPGR*AYGLTAVSFSFSGM
Trigger: CATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAGCGACCTGGACAGTGCCGAGATCGTGGCAGTGGCCGTCCTAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 90 bp AGGGCCCAGGAGAGCACCAGGTGCTCAAAGGTAGCAGCTGGAGTCTaGAGATGTTCCTCAGATGCAGGTAATGGTTGTAAGATGCAATGC +
Preference number: 1 (lower is better)
Translates to: RAQESTRCSKVAAGV*RCSSDAGNGCKMQC
Trigger: GCATTGCATCTTACAACCATTACCTGCATCTGAGGAACATCTCCAGACTCCAGCTGCTACCTTTGAGCACCTGGTGCTCTCCTGGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR TCA 90 bp GTTATGAGGCAGAGCTTCATTAAAAAGACCCCAGTGTGGACCGAGTaGGTGGCTGGGCAGCCACATCCATCATTCCTGACCCTAACAGTA +
Preference number: 1 (lower is better)
Translates to: VMRQSFIKKTPVWTE*VAGQPHPSFLTLTV
Trigger: TACTGTTAGGGTCAGGAATGATGGATGTGGCTGCCCAGCCACTCACTCGGTCCACACTGGGGTCTTTTTAATGAAGCTCTGCCTCATAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 90 bp TCTGCACAGTACAGTACACACGAGGAGGCTGAGCCCCCTAGAGAATaGTTTGCAATGTGTAACCAAGAAGGCGTTGCAAAGTCCAGAAGG +
Preference number: 1 (lower is better)
Translates to: SAQYSTHEEAEPPRE*FAMCNQEGVAKSRR
Trigger: CCTTCTGGACTTTGCAACGCCTTCTTGGTTACACATTGCAAAGCATTCTCTAGGGGGCTCAGCCTCCTCGTGTGTACTGTACTGTGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 90 bp AGGAACAGCCCGCAGCAGTCCTGGAGCCTCGTCTTCACTGGGTTCTaGCCAGACAGGAAAATTAAACACAGTGCAATGGGTTATAGTTTT +
Preference number: 1 (lower is better)
Translates to: RNSPQQSWSLVFTGF*PDRKIKHSAMGYSF
Trigger: AAAACTATAACCCATTGCACTGTGTTTAATTTTCCTGTCTGGGCAGAACCCAGTGAAGACGAGGCTCCAGGACTGCTGCGGGCTGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 90 bp GTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTGTaGAGACGTCTAAGGGCTGCAGGGGGTGACTATTGGCTGAAGATG +
Preference number: 1 (lower is better)
Translates to: VILQSVLTNHTLGLL*RRLRAAGGDYWLKM
Trigger: CATCTTCAGCCAATAGTCACCCCCTGCAGCCCTTAGACGTCTGCACAGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 90 bp ACGGCCACTGCCACGATCTCGGCACTGTCCAGGTCGCTGAGCCTATaGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTA +
Preference number: 1 (lower is better)
Translates to: TATATISALSRSLSL*TYSSKFFLFWHDNV
Trigger: TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAGCGACCTGGACAGTGCCGAGATCGTGGCAGTGGCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 90 bp AAACCAGCAGTCCATAAGAACAGGTTCAAGGTCCAGAAGCATTCTTaGTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCA +
Preference number: 1 (lower is better)
Translates to: KPAVHKNRFKVQKHS*YGGDGVYIRRQKGP
Trigger: TGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAAGAATGCTTCTGGACCTTGAACCTGTTCTTATGGACTGCTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 90 bp AAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTaGCCGGGTGACGGTGTAAACGTCTGTTGTCTTTTTGATGAACTG +
Preference number: 1 (lower is better)
Translates to: KGRINFSLSSPVLSC*PGDGVNVCCLFDEL
Trigger: CAGTTCATCAAAAAGACAACAGACGTTTACACCGTCACCCGGGCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR TCA 90 bp GCTCAACAGCAAAAGCACAGAAGAGATGCTGATGAGACACCCACCTaGGCATTCAGGAGACCCAATTGGAACAGTTCAGTGCTTTCTTAT +
Preference number: 1 (lower is better)
Translates to: AQQQKHRRDADETPT*AFRRPNWNSSVLSY
Trigger: ATAAGAAAGCACTGAACTGTTCCAATTGGGTCTCCTGAATGCTCAGGTGGGTGTCTCATCAGCATCTCTTCTGTGCTTTTGCTGTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 90 bp GCCAAACAAGCAGGCAGACTCTGGACAGGATCTTCTTGTCTTTGGTaGGCCACTCATTTTCTAACTCATTCAAGTAACAGCACTGACTTC +
Preference number: 1 (lower is better)
Translates to: AKQAGRLWTGSSCLW*ATHFLTHSSNSTDF
Trigger: GAAGTCAGTGCTGTTACTTGAATGAGTTAGAAAATGAGTGGCGCACCAAAGACAAGAAGATCCTGTCCAGAGTCTGCCTGCTTGTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 90 bp AAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTaGTGCCCGGGTGACGGTGTAAACGTCTGTTGTCTTTTTGATGAA +
Preference number: 1 (lower is better)
Translates to: KKGRINFSLSSPVLS*CPGDGVNVCCLFDE
Trigger: TTCATCAAAAAGACAACAGACGTTTACACCGTCACCCGGGCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 90 bp AGAGCCAAACAAGCAGGCAGACTCTGGACAGGATCTTCTTGTCTTTaGTGCGCCACTCATTTTCTAACTCATTCAAGTAACAGCACTGAC +
Preference number: 1 (lower is better)
Translates to: RAKQAGRLWTGSSCL*CATHFLTHSSNSTD
Trigger: GTCAGTGCTGTTACTTGAATGAGTTAGAAAATGAGTGGCGCACCAAAGACAAGAAGATCCTGTCCAGAGTCTGCCTGCTTGTTTGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 90 bp TGGAGATGTTCCTCAGATGCAGGTAATGGTTGTAAGATGCAATGCTaGAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTG +
Preference number: 1 (lower is better)
Translates to: WRCSSDAGNGCKMQC*KKGRINFSLSSPVL
Trigger: CAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCAGCATTGCATCTTACAACCATTACCTGCATCTGAGGAACATCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 90 bp GTCTGGAGATGTTCCTCAGATGCAGGTAATGGTTGTAAGATGCAATaGTGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTC +
Preference number: 1 (lower is better)
Translates to: VWRCSSDAGNGCKMQ*CKKGRINFSLSSPV
Trigger: GACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCAGCATTGCATCTTACAACCATTACCTGCATCTGAGGAACATCTCCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 90 bp TCTTCACTGGGTTCTGCCCAGACAGGAAAATTAAACACAGTGCAATaGGTTATAGTTTTTAGGTGGTGCCCAAAGCAAAGCTCCCACTTA +
Preference number: 1 (lower is better)
Translates to: SSLGSAQTGKLNTVQ*VIVFRWCPKQSSHL
Trigger: TAAGTGGGAGCTTTGCTTTGGGCACCACCTAAAAACTATAACCCATTGCACTGTGTTTAATTTTCCTGTCTGGGCAGAACCCAGTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 90 bp AGGTGGTGCCCAAAGCAAAGCTCCCACTTATTTCTGACATCCACTTaGTGCTGCTTAACTTCAAGAATGGAAGAAAATGGTCTTCAAGAA +
Preference number: 1 (lower is better)
Translates to: RWCPKQSSHLFLTST*CCLTSRMEENGLQE
Trigger: TTCTTGAAGACCATTTTCTTCCATTCTTGAAGTTAAGCAGCACCAAGTGGATGTCAGAAATAAGTGGGAGCTTTGCTTTGGGCACCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 90 bp CAGACAGGAAAATTAAACACAGTGCAATGGGTTATAGTTTTTAGGTaGTGCCCAAAGCAAAGCTCCCACTTATTTCTGACATCCACTTGG +
Preference number: 1 (lower is better)
Translates to: QTGKLNTVQWVIVFR*CPKQSSHLFLTSTW
Trigger: CCAAGTGGATGTCAGAAATAAGTGGGAGCTTTGCTTTGGGCACCACCTAAAAACTATAACCCATTGCACTGTGTTTAATTTTCCTGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 90 bp GATGCAATGGCAAGTAGGGAAGGAAGATGCAGAAAAGAACAAACGTaGATACTTAAGGGTTACGCTGTCTTTGGGTTTTCTAATGTGTTT +
Preference number: 1 (lower is better)
Translates to: DAMASREGRCRKEQT*ILKGYAVFGFSNVF
Trigger: AAACACATTAGAAAACCCAAAGACAGCGTAACCCTTAAGTATGCACGTTTGTTCTTTTCTGCATCTTCCTTCCCTACTTGCCATTGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR TCA 90 bp CCGGGTGACGGTGTAAACGTCTGTTGTCTTTTTGATGAACTGAACTaGCTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTC +
Preference number: 1 (lower is better)
Translates to: PGDGVNVCCLFDELN*LLQCVYRFIKTAAF
Trigger: GAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAGTCAGTTCAGTTCATCAAAAAGACAACAGACGTTTACACCGTCACCCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 90 bp AATAAATTAAAAATATTCCACAGAGCCAAACAAGCAGGCAGACTCTaGACAGGATCTTCTTGTCTTTGGTGCGCCACTCATTTTCTAACT +
Preference number: 1 (lower is better)
Translates to: NKLKIFHRAKQAGRL*TGSSCLWCATHFLT
Trigger: AGTTAGAAAATGAGTGGCGCACCAAAGACAAGAAGATCCTGTCCAGAGTCTGCCTGCTTGTTTGGCTCTGTGGAATATTTTTAATTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 90 bp AGTTCAGTGCTTTCTTATTGTCAAGAGCTAGCACACCAGTCACTGTaGAAAATGCAAATATCCAATGATGGTTTCAGCAAATGTTGTGTA +
Preference number: 1 (lower is better)
Translates to: SSVLSYCQELAHQSL*KMQISNDGFSKCCV
Trigger: TACACAACATTTGCTGAAACCATCATTGGATATTTGCATTTTGCACAGTGACTGGTGTGCTAGCTCTTGACAATAAGAAAGCACTGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR CCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCAGCCCGCAGCAGTCCTaGAGCCTCGTCTTCACTGGG +
Preference number: 2 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFSPQQS*SLVFTG
Trigger: CCCAGTGAAGACGAGGCTCCAGGACTGCTGCGGGCT...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR CCA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTAGGAGAGAGCAGGGGTaGGACCAGGGCGGAGGAACA +
Preference number: 2 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTRREQG*DQGGGT
Trigger: TGTTCCTCCGCCCTGGTCCCACCCCTGCTCTCTCCT...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CAA 90 bp CACAGTACAGTACACACGAGGAGGCTGAGCCCCCTAGAGAATGCTTaGCAATGTGTAACCAAGAAGGCGTTGCAAAGTCCAGAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: HSTVHTRRLSPLENA*QCVTKKALQSPEGK
Trigger: TTTTCCTTCTGGACTTTGCAACGCCTTCTTGGTTACACATTGCAAAGCATTCTCTAGGGGGCTCAGCCTCCTCGTGTGTACTGTACTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR GCA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCATAGTTTTTAGGTGGTaGCCAAAGCAAAGCTCCCAC +
Preference number: 2 (lower is better)
Translates to: LAATVRVKAFTHTPQIILIVFRW*PKQSSH
Trigger: GTGGGAGCTTTGCTTTGGGCACCACCTAAAAACTAT...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR CCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCCAAGCAGGCAGACTCTaGACAGGATCTTCTTGTCTT +
Preference number: 2 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCQAGRL*TGSSCL
Trigger: AAGACAAGAAGATCCTGTCCAGAGTCTGCCTGCTTG...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR TCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTGCTCCCACTTATTTCTaGCATCCACTTGGTGCTGCT +
Preference number: 2 (lower is better)
Translates to: LHPSYFTERTYKPHPRASAPTYF*HPLGAA
Trigger: AGCAGCACCAAGTGGATGTCAGAAATAAGTGGGAGC...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR GCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTGTCCAGAAGCATTCTTaGTATGGTGGAGATGGGGTG +
Preference number: 2 (lower is better)
Translates to: LHPSYFTERTYKPHPRASVQKHS*YGGDGV
Trigger: CACCCCATCTCCACCATAGCAAGAATGCTTCTGGAC...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR GCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTAGGTCTTTCCACTTTTaGCATGCCTGGATGCCTGAG +
Preference number: 2 (lower is better)
Translates to: LHPSYFTERTYKPHPRASRSFHF*HAWMPE
Trigger: CTCAGGCATCCAGGCATGGCAAAAGTGGAAAGACCT...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR GCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTAACAGCACTGACTTCTaGGGGAGAGATGGGAAGTCA +
Preference number: 2 (lower is better)
Translates to: LHPSYFTERTYKPHPRASNSTDF*GRDGKS
Trigger: TGACTTCCCATCTCTCCCGCAGAAGTCAGTGCTGTT...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR GCA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCTCTTCTTGTCTTTGGTaGGCCACTCATTTTCTAACT +
Preference number: 2 (lower is better)
Translates to: LAATVRVKAFTHTPQIILSSCLW*ATHFLT
Trigger: AGTTAGAAAATGAGTGGCGCACCAAAGACAAGAAGA...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR CCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCAGCAAAGGAGGAGACTaGCTTACTCCCGCCTCGCAT +
Preference number: 2 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFSKGGD*LTPASH
Trigger: ATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTGCT...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR GCA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTACAGGAGAGCACCAGGTaGTCAAAGGTAGCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVQESTR*SKVAAG
Trigger: TCCAGCTGCTACCTTTGAGCACCTGGTGCTCTCCTG...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR CCA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTAGAGCCTCGTCTTCACTaGGTTCTGCCCAGACAGGAA +
Preference number: 2 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVEPRLH*VLPRQE
Trigger: TTCCTGTCTGGGCAGAACCCAGTGAAGACGAGGCTC...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR GCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCTGTACCTCTCTTTCCTaGGGAGACGCAAGTCTCATG +
Preference number: 2 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFCTSLS*GDASLM
Trigger: CATGAGACTTGCGTCTCCGCAGGAAAGAGAGGTACA...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CAA 90 bp CTGAGCATTCAGGAGACCCAATTGGAACAGTTCAGTGCTTTCTTATaGTCAAGAGCTAGCACACCAGTCACTGTGCAAAATGCAAATATC +
Preference number: 2 (lower is better)
Translates to: LSIQETQLEQFSAFL*SRASTPVTVQNANI
Trigger: GATATTTGCATTTTGCACAGTGACTGGTGTGCTAGCTCTTGACAATAAGAAAGCACTGAACTGTTCCAATTGGGTCTCCTGAATGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR TCA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTGAGTATCTACGATTCTaGGAGCAGCTGGTAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTEYLRF*EQLVEV
Trigger: AACCTCTACCAGCTGCTCTCAGAATCGTAGATACTC...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR CCA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATCACTTTTGCCATGCCTaGATGCCTGAGATGGTCCTG +
Preference number: 2 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDHFCHA*MPEMVL
Trigger: CAGGACCATCTCAGGCATCCAGGCATGGCAAAAGTG...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR TCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTTTTGATGAACTGAACTaGCTTCTTCAGTGTGTGTAT +
Preference number: 2 (lower is better)
Translates to: LHPSYFTERTYKPHPRASFDELN*LLQCVY
Trigger: ATACACACACTGAAGAAGTCAGTTCAGTTCATCAAA...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR TCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTTTTTCTAATGTGTTTTaGAGCCATAATGTCCAGGGT +
Preference number: 2 (lower is better)
Translates to: LHPSYFTERTYKPHPRASFSNVF*SHNVQG
Trigger: ACCCTGGACATTATGGCTTCAAAACACATTAGAAAA...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR TCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTCTTATAAACTACTTTTaGGCTCTTTCCACTTTTCCC +
Preference number: 2 (lower is better)
Translates to: LHPSYFTERTYKPHPRASLINYF*ALSTFP
Trigger: GGGAAAAGTGGAAAGAGCTCAAAAGTAGTTTATAAG...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR GCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACAAAGAGGAGTGACGTGTaGAGAGTGAGACATCAGAGA +
Preference number: 2 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTKRSDV*RVRHQR
Trigger: TCTCTGATGTCTCACTCTGCACACGTCACTCCTCTT...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR GCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCTTCTCTTCGTCAACCTaGTCATTATGGCTAAAGACG +
Preference number: 2 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFFSSST*SLWLKT
Trigger: CGTCTTTAGCCATAATGAGCAGGTTGACGAAGAGAA...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR CCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCGAAGCATTCTTGCTATaGTGGAGATGGGGTGTATAT +
Preference number: 2 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFEAFLL*WRWGVY
Trigger: ATATACACCCCATCTCCACCATAGCAAGAATGCTTC...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR CCA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTAACCACGTAATCCAGTaGACAGTCTGTAAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTNHVIQ*TVCKGK
Trigger: TTTGCCTTTACAGACTGTCCACTGGATTACGTGGTT...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR CCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACACAAACAGTCAAGGGATaGACACAGATGTCTCCTGTC +
Preference number: 2 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTQTVKG*TQMSPV
Trigger: GACAGGAGACATCTGTGTCCATCCCTTGACTGTTTG...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR TCA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTTTTACTACCAGGTACTaGCAGTGCTATACTAAAAGG +
Preference number: 2 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTFTTRY*QCYTKR
Trigger: CCTTTTAGTATAGCACTGTCAGTACCTGGTAGTAAA...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR GCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCGTAATGGTTGTAAGATaGAATGCTGCAAGAAAGGCA +
Preference number: 2 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFVMVVR*NAARKA
Trigger: TGCCTTTCTTGCAGCATTGCATCTTACAACCATTAC...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR TCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACACTTTCATTGGCCACATaGAAACTATTTCCACACTAC +
Preference number: 2 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTLSLAT*KLFPHY
Trigger: GTAGTGTGGAAATAGTTTTCATGTGGCCAATGAAAG...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR TCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACACTAAGGAACACAAACTaGGGAGAACTATCTTTGCTT +
Preference number: 2 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTLRNTN*GELSLL
Trigger: AAGCAAAGATAGTTCTCCTCAGTTTGTGTTCCTTAG...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CAA 90 bp AGCATGTCCATTTGTGAGTTTCATTGTATAGACCAGGATTATGTTTaGAAAGTTAAAAGAAGAATCTATGTACCTCTCTTTCCTGCGGAG +
Preference number: 2 (lower is better)
Translates to: SMSICEFHCIDQDYV*KVKRRIYVPLFPAE
Trigger: CTCCGCAGGAAAGAGAGGTACATAGATTCTTCTTTTAACTTTCAAAACATAATCCTGGTCTATACAATGAAACTCACAAATGGACATGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR GCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACAAGTCACTGTGCAAAATaGAAATATCCAATGATGGTT +
Preference number: 2 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTSHCAK*KYPMMV
Trigger: AACCATCATTGGATATTTGCATTTTGCACAGTGACT...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 72 bp GTGGGACCAGGGCGGAGGAACAGCCCGCAGCAGTCCTaGAGCCTCGTCTTCACTGGGTTCTGCCCAGACAGG +
Preference number: 3 (lower is better)
Translates to: VGPGRRNSPQQS*SLVFTGFCPDR
Trigger: CCTGTCTGGGCAGAACCCAGTGAAGACGAGGCTCCAGGACTGCTGCGGGCTGTTCCTCCGCCCTGGTCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 72 bp CAGAGCGTACTTACAAACCACACCCTAGGGCTTCTGTaGAGACGTCTAAGGGCTGCAGGGGGTGACTATTGG +
Preference number: 3 (lower is better)
Translates to: QSVLTNHTLGLL*RRLRAAGGDYW
Trigger: CCAATAGTCACCCCCTGCAGCCCTTAGACGTCTGCACAGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR TCA 72 bp CAGAGCTTCATTAAAAAGACCCCAGTGTGGACCGAGTaGGTGGCTGGGCAGCCACATCCATCATTCCTGACC +
Preference number: 3 (lower is better)
Translates to: QSFIKKTPVWTE*VAGQPHPSFLT
Trigger: GGTCAGGAATGATGGATGTGGCTGCCCAGCCACTCACTCGGTCCACACTGGGGTCTTTTTAATGAAGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 72 bp CAAACTGGAGCTGTAATTGCTAGCAAAGGAGGAGACTaGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTT +
Preference number: 3 (lower is better)
Translates to: QTGAVIASKGGD*LTPASHLECRV
Trigger: AACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTGCTAGCAATTACAGCTCCAGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 72 bp GAGAGCACCAGGTGCTCAAAGGTAGCAGCTGGAGTCTaGAGATGTTCCTCAGATGCAGGTAATGGTTGTAAG +
Preference number: 3 (lower is better)
Translates to: ESTRCSKVAAGV*RCSSDAGNGCK
Trigger: CTTACAACCATTACCTGCATCTGAGGAACATCTCCAGACTCCAGCTGCTACCTTTGAGCACCTGGTGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 72 bp GCCACGATCTCGGCACTGTCCAGGTCGCTGAGCCTATaGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCAT +
Preference number: 3 (lower is better)
Translates to: ATISALSRSLSL*TYSSKFFLFWH
Trigger: ATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAGCGACCTGGACAGTGCCGAGATCGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR TCA 72 bp AGCTCAGAGGTCAGTCTGGTGTTCTCAGCCCTCATCTaGGACCTAGTAGGTATGGGTGCTAATGAGGTGATA +
Preference number: 3 (lower is better)
Translates to: SSEVSLVFSALI*DLVGMGANEVI
Trigger: TATCACCTCATTAGCACCCATACCTACTAGGTCTCAGATGAGGGCTGAGAACACCAGACTGACCTCTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 72 bp GTTCAAGGTCCAGAAGCATTCTTGCTATGGTGGAGATaGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACT +
Preference number: 3 (lower is better)
Translates to: VQGPEAFLLWWR*GVYQKAERPRT
Trigger: AGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAAGAATGCTTCTGGACCTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 72 bp GAACAGGTTCAAGGTCCAGAAGCATTCTTGCTATGGTaGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCC +
Preference number: 3 (lower is better)
Translates to: EQVQGPEAFLLW*RWGVYQKAERP
Trigger: GGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAAGAATGCTTCTGGACCTTGAACCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR TCA 72 bp CAAAAGCACAGAAGAGATGCTGATGAGACACCCACCTaGGCATTCAGGAGACCCAATTGGAACAGTTCAGTG +
Preference number: 3 (lower is better)
Translates to: QKHRRDADETPT*AFRRPNWNSSV
Trigger: CACTGAACTGTTCCAATTGGGTCTCCTGAATGCTCAGGTGGGTGTCTCATCAGCATCTCTTCTGTGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR CAA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTGGTCCAGAAGCATTCTaGCTATGGTGGAGATGGGGT +
Preference number: 3 (lower is better)
Translates to: LHPSYFTERTYKPHPRASGPEAF*LWWRWG
Trigger: ACCCCATCTCCACCATAGCAAGAATGCTTCTGGACC...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR CAA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTGAGGACACTCAAGCTTaGTCTAAGCTCAGAGGTCAG +
Preference number: 3 (lower is better)
Translates to: LHPSYFTERTYKPHPRASEDTQA*SKLRGQ
Trigger: CTGACCTCTGAGCTTAGACAAAGCTTGAGTGTCCTC...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 72 bp GTCCATAAGAACAGGTTCAAGGTCCAGAAGCATTCTTaGTATGGTGGAGATGGGGTGTATATCAGAAGGCAG +
Preference number: 3 (lower is better)
Translates to: VHKNRFKVQKHS*YGGDGVYIRRQ
Trigger: CTGCCTTCTGATATACACCCCATCTCCACCATAGCAAGAATGCTTCTGGACCTTGAACCTGTTCTTATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 72 bp GCAGGCAGACTCTGGACAGGATCTTCTTGTCTTTGGTaGGCCACTCATTTTCTAACTCATTCAAGTAACAGC +
Preference number: 3 (lower is better)
Translates to: AGRLWTGSSCLW*ATHFLTHSSNS
Trigger: GCTGTTACTTGAATGAGTTAGAAAATGAGTGGCGCACCAAAGACAAGAAGATCCTGTCCAGAGTCTGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 72 bp CAAGCAGGCAGACTCTGGACAGGATCTTCTTGTCTTTaGTGCGCCACTCATTTTCTAACTCATTCAAGTAAC +
Preference number: 3 (lower is better)
Translates to: QAGRLWTGSSCL*CATHFLTHSSN
Trigger: GTTACTTGAATGAGTTAGAAAATGAGTGGCGCACCAAAGACAAGAAGATCCTGTCCAGAGTCTGCCTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR CAA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTGTAACCAAGAAGGCGTaGCAAAGTCCAGAAGGAAAA +
Preference number: 3 (lower is better)
Translates to: LHPSYFTERTYKPHPRASVTKKA*QSPEGK
Trigger: TTTTCCTTCTGGACTTTGCAACGCCTTCTTGGTTAC...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 72 bp CATTTTCTAACTCATTCAAGTAACAGCACTGACTTCTaGGGGAGAGATGGGAAGTCAACGTTTGAAGGCCAA +
Preference number: 3 (lower is better)
Translates to: HFLTHSSNSTDF*GRDGKSTFEGQ
Trigger: TTGGCCTTCAAACGTTGACTTCCCATCTCTCCCGCAGAAGTCAGTGCTGTTACTTGAATGAGTTAGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 72 bp GGTTCTGCCCAGACAGGAAAATTAAACACAGTGCAATaGGTTATAGTTTTTAGGTGGTGCCCAAAGCAAAGC +
Preference number: 3 (lower is better)
Translates to: GSAQTGKLNTVQ*VIVFRWCPKQS
Trigger: GCTTTGCTTTGGGCACCACCTAAAAACTATAACCCATTGCACTGTGTTTAATTTTCCTGTCTGGGCAGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR TCA 72 bp AAAGTTAGGAAGAGGGCATTCTTAGGTTCTTGGTTATaGGGCAGAGCTTCATTAAAAAGACCCCAGTGTGGA +
Preference number: 3 (lower is better)
Translates to: KVRKRAFLGSWL*GRASLKRPQCG
Trigger: TCCACACTGGGGTCTTTTTAATGAAGCTCTGCCTCATAACCAAGAACCTAAGAATGCCCTCTTCCTAACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 72 bp GCAAGTAGGGAAGGAAGATGCAGAAAAGAACAAACGTaGATACTTAAGGGTTACGCTGTCTTTGGGTTTTCT +
Preference number: 3 (lower is better)
Translates to: ASREGRCRKEQT*ILKGYAVFGFS
Trigger: AGAAAACCCAAAGACAGCGTAACCCTTAAGTATGCACGTTTGTTCTTTTCTGCATCTTCCTTCCCTACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 72 bp TTAAACACAGTGCAATGGGTTATAGTTTTTAGGTGGTaGCCAAAGCAAAGCTCCCACTTATTTCTGACATCC +
Preference number: 3 (lower is better)
Translates to: LNTVQWVIVFRW*PKQSSHLFLTS
Trigger: GGATGTCAGAAATAAGTGGGAGCTTTGCTTTGGGCACCACCTAAAAACTATAACCCATTGCACTGTGTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR CAA 90 bp CTGTCTTTGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCCAGGGTGTCTGTAATTTCTGACATCCACTaGGTGCTGCTTAACTTCAAG +
Preference number: 3 (lower is better)
Translates to: LSLGFLMCFEAIMSRVSVISDIH*VLLNFK
Trigger: CTTGAAGTTAAGCAGCACCAAGTGGATGTCAGAAAT...TACAGACACCCTGGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR-3UTR CAA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTTTCAGTGCTTTCTTATaGTCAAGAGCTAGCACACCA +
Preference number: 3 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTFSAFL*SRASTP
Trigger: TGGTGTGCTAGCTCTTGACAATAAGAAAGCACTGAA...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR GCA 72 bp CTTTCTTATTGTCAAGAGCTAGCACACCAGTCACTGTaGAAAATGCAAATATCCAATGATGGTTTCAGCAAA +
Preference number: 3 (lower is better)
Translates to: LSYCQELAHQSL*KMQISNDGFSK
Trigger: TTTGCTGAAACCATCATTGGATATTTGCATTTTGCACAGTGACTGGTGTGCTAGCTCTTGACAATAAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CCA 72 bp AAATTAAACACAGTGCAATGGGTTATAGTTTTTAGGTaGTGCCCAAAGCAAAGCTCCCACTTATTTCTGACA +
Preference number: 3 (lower is better)
Translates to: KLNTVQWVIVFR*CPKQSSHLFLT
Trigger: TGTCAGAAATAAGTGGGAGCTTTGCTTTGGGCACCACCTAAAAACTATAACCCATTGCACTGTGTTTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR TCA 72 bp ATAGCAGCTGTAAAGTTCAGTTTCATAAAGACAATATaGTCCTACAAACAGTCAAGGGATGGACACAGATGT +
Preference number: 3 (lower is better)
Translates to: IAAVKFSFIKTI*SYKQSRDGHRC
Trigger: ACATCTGTGTCCATCCCTTGACTGTTTGTAGGATCATATTGTCTTTATGAAACTGAACTTTACAGCTGCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR TCA 72 bp GGAAGATGTAAGTTTGAATTTCTTGCAGAAAAGTTATaGGTCTCTAATGCTGTGCTACAGAAATTCTTTTGC +
Preference number: 3 (lower is better)
Translates to: GRCKFEFLAEKL*VSNAVLQKFFC
Trigger: GCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTTCTGCAAGAAATTCAAACTTACATCTTCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGTCGAAGACGCAGAAGTaGGGACTGGTGAGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWSKTQK*GLVSCA
Trigger: CGCGCAGCTCACCAGTCCTCACTTCTGCGTCTTCGA...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGCACCGAGACACTCGCTaGTCTCCTCATCGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWHRDTR*SPHRFQ
Trigger: CTGGAAGCGATGAGGAGATCAGCGAGTGTCTCGGTG...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGATAGTTCACCCACTGTaGCTCCTCCTCGTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWIVHPL*LLLVQL
Trigger: GAGCTGCACGAGGAGGAGGCACAGTGGGTGAACTAT...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCCGCTTCCAGACCCGGTaGCTCTGCTTCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LAATVRVKAFTHTPQIILRFQTR*LCFWSS
Trigger: GGAGCTCCAGAAGCAGAGCCACCGGGTCTGGAAGCG...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGTCTCTACTCATGCTTTaGAACTCCGCCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWSLLML*NSASCH
Trigger: GTGGCAGGAGGCGGAGTTTCAAAGCATGAGTAGAGA...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGGAAGAGGCCCTTCACTaGCTGAGTCTATGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWEEALH*LSLCWN
Trigger: GTTCCAGCATAGACTCAGTCAGTGAAGGGCCTCTTC...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGCCTGCAGTTTTATGGTaGTCTGGCGGATCCTCTCGA +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWPAVLW*SGGSSR
Trigger: TCGAGAGGATCCGCCAGACCACCATAAAACTGCAGG...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGTGGATGAGGAGCTTGTaGGGTCAGATATGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWWMRSL*GQIWLR
Trigger: CCTCAACCATATCTGACCTCACAAGCTCCTCATCCA...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGTTAGCTAGCTCTTCCTaGCCACTGGCACCAAACACT +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWLASSS*PLAPNT
Trigger: AGTGTTTGGTGCCAGTGGGCAGGAAGAGCTAGCTAA...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGGCCAAATCTCTTTCATaGCGTTGCTGCTGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWAKSLS*RCCCAF
Trigger: AAAGGCACAGCAGCAACGTCATGAAAGAGATTTGGC...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCGAGCCACTCACAGAGTaGCCAGACAGGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LAATVRVKAFTHTPQIILEPLTE*PDRSSS
Trigger: ACTGGAAGACCTGTCTGGGCACTCTGTGAGTGGCTC...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGCAATTTCTTCTCCCCTaGAGACTTGAGCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWQFLLP*RLELLL
Trigger: CAGGAGAAGCTCAAGTCTGCAGGGGAGAAGAAATTG...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATAGCAGACTGGCCTCCTaGGCCTTCAGTCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHSRLAS*AFSLSF
Trigger: GAAGGAGAGACTGAAGGCCCAGGAGGCCAGTCTGCT...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCCTCAGATGCTCCTCCTaGACGCCCAAGCTGCTACCA +
Preference number: 4 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCLRCSS*TPKLLP
Trigger: TGGTAGCAGCTTGGGCGTTCAGGAGGAGCATCTGAG...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGTCCTCAGTTTTCTCATaGAGTCTGGAAAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWSSVFS*SLENAA
Trigger: GGCAGCATTTTCCAGACTTCATGAGAAAACTGAGGA...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCGACTTGACAGGCAGATaGCAGTGTCCTTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LAATVRVKAFTHTPQIILDLTGR*QCPSVL
Trigger: CAGGACTGAAGGACACTGTCATCTGCCTGTCAAGTC...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCGCAGCGCTTTCCTCCTaGTTATTGTCTGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: LAATVRVKAFTHTPQIILAALSS*LLSGRD
Trigger: GTCCCTTCCAGACAATAAGCAGGAGGAAAGCGCTGC...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGCCTACATGCTCAAGATaGAGGAGATGGGAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWPTCSR*RRWESK
Trigger: TTTACTCTCCCATCTCCTGCATCTTGAGCATGTAGG...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATAGTCCCCACTCTCTCTaGATCCTTGCTCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHSPHSL*ILAQGC
Trigger: GCATCCCTGAGCAAGGATGCAGAGAGAGTGGGGACT...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGTCTGCTCTTCCAATATaGCCCCCAAATTTAGCCACT +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWSALPI*PPNLAT
Trigger: AGTGGCTAAATTTGGGGGCCATATTGGAAGAGCAGA...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCGGGACAGGTCACTACTaGAAGACGCACTTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCGTGHY*KTHLGD
Trigger: GTCCCCCAAGTGCGTCTTCCAGTAGTGACCTGTCCC...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGTGGAAGCTGTTTATGTaGAACATCCAATTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWWKLFM*NIQFGV
Trigger: GACCCCAAATTGGATGTTTCACATAAACAGCTTCCA...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCGATTCTCCAGATGGCTaGTACCCAGGTCTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCDSPDG*YPGLAC
Trigger: ACAGGCCAGACCTGGGTATCAGCCATCTGGAGAATC...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTCTGGAAGAATCTGTCTaGCTCCTGCACAACTGTGCC +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSLEESV*LLHNCA
Trigger: GGCACAGTTGTGCAGGAGGCAGACAGATTCTTCCAG...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTCAACAGCAAGTTTGCTaGCAGTCCCAAGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSQQQVC*QSQASC
Trigger: GCAGGAAGCTTGGGACTGGCAGCAAACTTGCTGTTG...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATATCCTTGCTCAGGGATaGCTCCTGCTGACTGGATGT +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHILAQG*LLLTGC
Trigger: ACATCCAGTCAGCAGGAGGCATCCCTGAGCAAGGAT...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCCTCTCTCTGCATCCTTaGTCAGGGATGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCLSLHP*SGMPPA
Trigger: AGCAGGAGGCATCCCTGAGCAAGGATGCAGAGAGAG...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTGTATGCTGGAGCAGGTaGTGCTGTTGCCACTTTCCT +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSVCWSR*CCCHFP
Trigger: AGGAAAGTGGCAACAGCACCACCTGCTCCAGCATAC...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCCATAGTGGCGCTTCTTaGAAATCACAGGCGGATCCT +
Preference number: 4 (lower is better)
Translates to: LAATVRVKAFTHTPQIILHSGAS*KSQADP
Trigger: AGGATCCGCCTGTGATTTCCAAGAAGCGCCACTATG...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCTGCCAGCAGCCCTCCTaGCTTAGGACTAGGGGATTT +
Preference number: 4 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCCQQPS*LRTRGF
Trigger: AAATCCCCTAGTCCTAAGCCAGGAGGGCTGCTGGCA...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTCTAGTAGCTCCTCTGTaGCAGCCAGGGGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LHPSYFTERTYKPHPRASLVAPL*QPGEGA
Trigger: AGCCCCTTCCCCTGGCTGCCACAGAGGAGCTACTAG...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTAACAAGGCATCTGGATaGGGAGCTTGTGAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSNKASG*GACEVR
Trigger: TCTGACCTCACAAGCTCCTCATCCAGATGCCTTGTT...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTGCTGCTGTGCCTTTATaGTCTGAGCCAGAGATACAC +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSAAVPL*SEPEIH
Trigger: GTGTATCTCTGGCTCAGATCATAAAGGCACAGCAGC...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGCTTCTTGAAGACGTTTaGTTTCTGCCTTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWLLEDV*FLPFLA
Trigger: AGCAAGAAAAGGCAGAAATCAAACGTCTTCAAGAAG...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAAGCTGGCGGCGCTGCATaGGCTTCTGTTCTCGCTTCG +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQAGGAA*ASVLAS
Trigger: CGAAGCGAGAACAGAAGCTCATGCAGCGCCGCCAGC...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTCCCTCTGGAACGCTCTaGCTCTGTTACAGATTTCCA +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSPSGTL*LCYRFP
Trigger: TGGAAATCTGTAACAGAGTCAGAGCGTTCCAGAGGG...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTTCCTGGACCAGGATGTaGTCTACTCGGTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSSWTRM*STRSLF
Trigger: GAAAAGAGACCGAGTAGATCACATCCTGGTCCAGGA...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTCCTCTCTTTCCGGGCTaGCTTATTGGCTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSPLFPG*LIGFLK
Trigger: CTTCAAGAAGCCAATAAGGCAGCCCGGAAAGAGAGG...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCGACTTGAGCTTCTCCTaGAGTTTTATGGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LAATVRVKAFTHTPQIILDLSFS*SFMVVW
Trigger: CCAGACCACCATAAAACTGCAGGAGAAGCTCAAGTC...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTCTATGTCTAGACCTTTaGTGGCACCACCAAGGAACG +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSLCLDL*WHHQGT
Trigger: CGTTCCTTGGTGGTGCCAGCAAAGGTCTAGACATAG...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATCTGTTTCTTCCGGAGTaGGGGCATCTTATCATCCTC +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHLFLPE*GHLIIL
Trigger: GAGGATGATAAGATGCCCCCACTCCGGAAGAAACAG...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATAGTTTTATGGTGGTCTaGCGGATCCTCTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHSFMVV*RILSIS
Trigger: GGAGATCGAGAGGATCCGCCAGACCACCATAAAACT...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTATGCCAAGGACCCTCTaGAACGCTCTGACTCTGTTA +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSMPRTL*NALTLL
Trigger: TAACAGAGTCAGAGCGTTCCAGAGGGTCCTTGGCAT...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCGATATGGTTGAGGTGTaGAAGTTAACGGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LAATVRVKAFTHTPQIILDMVEV*KLTVLK
Trigger: CTTCAGGACCGTTAACTTTCACACCTCAACCATATC...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGCTTTCTGAAACTCTTTaGTGGGTTCATAAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWLSETL*WVHKSF
Trigger: GAAACTCTTATGAACCCATCAAAGAGTTTCAGAAAG...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTTGTGCCTTTATGATCTaGGCCAGAGATACACTCTCC +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSCAFMI*ARDTLS
Trigger: GGAGAGTGTATCTCTGGCTCAGATCATAAAGGCACA...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCAAGTCTCCAGCTGTCTaGGCAGACTGGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFKSPAV*ADWPPG
Trigger: CCCAGGAGGCCAGTCTGCTCAGACAGCTGGAGACTT...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGCTTCCTCTTTTTCATaGGACGTTTCTGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHASSFS*DVSVAG
Trigger: ACCAGCCACAGAAACGTCTCATGAAAAAGAGGAAGC...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTGTCTTTGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCCAGGGTGTCTGTAGCTGCTGAGTGGGGTTaGGGTGGCATTCAAAGGCCG +
Preference number: 4 (lower is better)
Translates to: LSLGFLMCFEAIMSRVSVAAEWG*GGIQRP
Trigger: CGGCCTTTGAATGCCACCGCAACCCCACTCAGCAGC...TACAGACACCCTGGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGAAGACGTTTGATTTCTaGCTTTTCTTGCTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWKTFDF*LFLLKS
Trigger: AGACTTCAGCAAGAAAAGGCAGAAATCAAACGTCTT...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATTGGAAGTTGGAGCACTaGCCCAAGAATCATCTAGAC +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHWKLEH*PKNHLD
Trigger: GTCTAGATGATTCTTGGGCCAGTGCTCCAACTTCCA...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCACAGGCACTAGAGGATaGAGAAGAGTCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCTGTRG*RRVRQQ
Trigger: CTGCTGTCTGACTCTTCTCCATCCTCTAGTGCCTGT...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTGTCTTTGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCCAGGGTGTCTGTAGCTCCCGAGGAGTGCTaGGAGGTAGCATCCACAGAG +
Preference number: 4 (lower is better)
Translates to: LSLGFLMCFEAIMSRVSVAPEEC*EVASTE
Trigger: CTCTGTGGATGCTACCTCCCAGCACTCCTCGGGAGC...TACAGACACCCTGGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATTGTCCTTCAGTCCTGTaGCTTGCTTTGCTAGATTCT +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHCPSVL*LALLDS
Trigger: AGAATCTAGCAAAGCAAGTCACAGGACTGAAGGACA...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTTCATCAAACCAGTCTTaGTCATCTAATGCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSSSNQS*SSNALR
Trigger: CCTGAGCGCATTAGATGATCAAGACTGGTTTGATGA...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTCAGAGAGGCCGCTGTTaGTTTCAGGGCTTCAATACG +
Preference number: 4 (lower is better)
Translates to: LHPSYFTERTYKPHPRASQRGRC*FQGFNT
Trigger: CGTATTGAAGCCCTGAAAGCAACAGCGGCCTCTCTG...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTACCTCCTGCACAACTGTaGCAGCAGCCCTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVPPAQL*QQPSWL
Trigger: AAGCCAGGAGGGCTGCTGGCACAGTTGTGCAGGAGG...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTCTTCCCATGGTCCTTTaGTTTGTGTACCACCTATGT +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSLPMVL*FVYHLC
Trigger: ACATAGGTGGTACACAAAGCAAAGGACCATGGGAAG...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTCTCTCGATCTCCTCCTaGTGCTTAAGGATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LHPSYFTERTYKPHPRASLSISS*CLRISC
Trigger: GCAGCTGATCCTTAAGCAGCAGGAGGAGATCGAGAG...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCAGACTCTTCTACTTGTaGTGCCTATGTCTAGACCTT +
Preference number: 4 (lower is better)
Translates to: LAATVRVKAFTHTPQIILRLFYL*CLCLDL
Trigger: AAGGTCTAGACATAGGCAGCACAAGTAGAAGAGTCT...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCCTTTTTGCTCCATCTTaGGTGCAGGTCCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCLFAPS*VQVPES
Trigger: AGATTCTGGGACCTGCACCCAAGATGGAGCAAAAAG...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTAACATGCTGACGGGCTaGTTCTTCAAGCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSNMLTG*FFKQSL
Trigger: AAGACTTTGCTTGAAGAACCAGCCCGTCAGCATGTT...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCTCAAGATGCAGGAGATaGGAGAGTAAATTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: LAATVRVKAFTHTPQIILSRCRR*ESKFSV
Trigger: GACTGAGAATTTACTCTCCCATCTCCTGCATCTTGA...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTGTCCTCTTTCACAGGTaGACTGATAGCTTTAGTCCA +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSVLFHR*TDSFSP
Trigger: TGGACTAAAGCTATCAGTCCACCTGTGAAAGAGGAC...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTATTAATGACGCTGTGTaGACTTCCCTTTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSINDAV*TSLCQF
Trigger: GAACTGGCAAAGGGAAGTCCACACAGCGTCATTAAT...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTTTTTCTCATGAAGTCTaGAAAATGCTGCCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSFSHEV*KMLPLV
Trigger: CACCAGCGGCAGCATTTTCCAGACTTCATGAGAAAA...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTCAGAGCAGTCTTGTCTaGGGAAGCATCCTCATCCGA +
Preference number: 4 (lower is better)
Translates to: LHPSYFTERTYKPHPRASQSSLV*GSILIR
Trigger: TCGGATGAGGATGCTTCCCCAGACAAGACTGCTCTG...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAAAAGTGTGCTGTGCTCTaGACTCCCAGGCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQKCAVL*TPRLCL
Trigger: CAGGCACAGCCTGGGAGTCCAGAGCACAGCACACTT...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTGTCTTTGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCCAGGGTGTCTGTAGCTGTCCTGAGCATGTaGAGTCCCCACTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LSLGFLMCFEAIMSRVSVAVLSM*SPHSLC
Trigger: GCAGAGAGAGTGGGGACTCCACATGCTCAGGACAGC...TACAGACACCCTGGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATAGAATTGATTCTGCATaGCTTCATCCAGACAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHRIDSA*LHPDRL
Trigger: CAGCCTGTCTGGATGAAGCCATGCAGAATCAATTCT...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATTTGGGATTCAAGAGTTaGCTTCCTTTCTGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHLGFKS*LPFCQC
Trigger: ACACTGACAGAAAGGAAGTCAACTCTTGAATCCCAA...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTGACTTCAGATCCGCCTaGCTGCTTACAGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTDFRSA*LLTAGI
Trigger: GATGCCTGCTGTAAGCAGTCAGGCGGATCTGAAGTC...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACAAGGGATGCCTCCTGCTaGCTGGATGTCTGGACTGCG +
Preference number: 4 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTRDASC*LDVWTA
Trigger: CGCAGTCCAGACATCCAGTCAGCAGGAGGCATCCCT...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATAAGCTGCTGTTGCTTTaGTTCTCCAGAAAACGTGTT +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHKLLLL*FSRKRV
Trigger: AACACGTTTTCTGGAGAATCAAAGCAACAGCAGCTT...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATTGGTCAAGAAACTCCTaGTTGCTAAGCTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHWSRNS*LLSWIF
Trigger: GAAAATCCAGCTTAGCAATCAGGAGTTTCTTGACCA...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATTTCAGAACTGTGCAATaGATCAATTGCTGGTCCATC +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHFRTVQ*INCWSI
Trigger: GATGGACCAGCAATTGATGCATTGCACAGTTCTGAA...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTGTCTTTGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCCAGGGTGTCTGTATGCTGGAGCAGGTGGTaGTGTTGCCACTTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LSLGFLMCFEAIMSRVSVCWSRW*CCHFPD
Trigger: GTCAGGAAAGTGGCAACAGCACCACCTGCTCCAGCA...TACAGACACCCTGGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCAGGAGGCACAGTTTTTaGTTTAGAGAAGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCRRHSF*FREGFP
Trigger: AGGGAAGCCTTCTCTAAAGCAAAAACTGTGCCTCCT...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCTGCTATTTTACAAGTTaGTTCCTGGAGGACTTCAGT +
Preference number: 4 (lower is better)
Translates to: LAATVRVKAFTHTPQIILCYFTS*FLEDFS
Trigger: ACTGAAGTCCTCCAGGAAGCAACTTGTAAAATAGCA...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCTTCCTCATCAATGAGTaGGTTCTGAGCACTTCCAGT +
Preference number: 4 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCFLINE*VLSTSS
Trigger: ACTGGAAGTGCTCAGAACCCACTCATTGATGAGGAA...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTCAACATGTTCAGCAATaGATGCCAAGGACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LHPSYFTERTYKPHPRASQHVQQ*MPRTLW
Trigger: CCAGAGGGTCCTTGGCATCCATTGCTGAACATGTTG...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCCAGGAACACTCTCTGTaGCATCAGAAACAAGGACTT +
Preference number: 4 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCQEHSL*HQKQGL
Trigger: AAGTCCTTGTTTCTGATGCCACAGAGAGTGTTCCTG...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCAGCAACTTGGAACACTaGGTGATTGTTCTTCAGTAT +
Preference number: 4 (lower is better)
Translates to: LAATVRVKAFTHTPQIILSNLEH*VIVLQY
Trigger: ATACTGAAGAACAATCACCCAGTGTTCCAAGTTGCT...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTACTGGCACCAAACACTaGGCTCTCAGGTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTTGTKH*ALRSGT
Trigger: TGTCCCAGACCTGAGAGCCCAGTGTTTGGTGCCAGT...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CAA 72 bp AGCCAAACAAGCAGGCAGACTCTGGACAGGATCTTCTaGTCTTTGGTGCGCCACTCATTTTCTAACTCATTC +
Preference number: 4 (lower is better)
Translates to: SQTSRQTLDRIF*SLVRHSFSNSF
Trigger: GAATGAGTTAGAAAATGAGTGGCGCACCAAAGACAAGAAGATCCTGTCCAGAGTCTGCCTGCTTGTTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CAA 72 bp AACCCAGAGTTAACTGCCCTGGATAGCACAAATTGTTaGGACTCAGATGTCAATCTGAAGCCTCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: NPELTALDSTNC*DSDVNLKPPWW
Trigger: CCACCATGGAGGCTTCAGATTGACATCTGAGTCCAAACAATTTGTGCTATCCAGGGCAGTTAACTCTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTACTGGATGGTCAATATaGCCTAGAGTCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTTGWSI*PRVWAW
Trigger: CCAGGCCCAGACTCTAGGTCATATTGACCATCCAGT...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTGCGAATCTTGGTCTCTaGCGGGTTGAAACCTTTGTA +
Preference number: 4 (lower is better)
Translates to: LHPSYFTERTYKPHPRASANLGL*RVETFV
Trigger: TACAAAGGTTTCAACCCGTCAGAGACCAAGATTCGC...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCGTTCCCAGCATCTTCTaGATCCGGGCAGAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFVPSIF*IRAEKA
Trigger: TGCTTTCTCTGCCCGGATTCAGAAGATGCTGGGAAC...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTAGAGGCGCGCGGTCTCTaGTTGCTGAGCTGCTATTTT +
Preference number: 4 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVEARGL*LLSCYF
Trigger: AAAATAGCAGCTCAGCAATCAGAGACCGCGCGCCTC...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATACTGAGAGTCCTTCCTaGGCGACGATGGTGAGGACC +
Preference number: 4 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDTESPS*ATMVRT
Trigger: GGTCCTCACCATCGTCGCTCAGGAAGGACTCTCAGT...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATTTTTCGGGTAGCACTTaGAGACTTCTTAGTATCCAT +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHFSGST*RLLSIH
Trigger: ATGGATACTAAGAAGTCTGCAAGTGCTACCCGAAAA...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTCTCCTCCTCTCCTCCTaGTGTCTAACAATGTACTGT +
Preference number: 4 (lower is better)
Translates to: LHPSYFTERTYKPHPRASLLLSS*CLTMYC
Trigger: ACAGTACATTGTTAGACAGCAGGAGGAGAGGAGGAG...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAATTCTTCTCTTCGTGTTaGCTCCTCCTCCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQFFSSC*LLLLSS
Trigger: GGAGGAGAGGAGGAGGAGGCAACACGAAGAGAAGAA...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCCTCCAACAGCAAGTTTaGTGCCAGTCCCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFLQQQV*CQSQAS
Trigger: GGAAGCTTGGGACTGGCAGCAAACTTGCTGTTGGAG...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATGAAGGGGAGAACTTCTaGCGCTTGGAGTCCACAGCG +
Preference number: 4 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDEGENF*RLESTA
Trigger: CGCTGTGGACTCCAAGCGGCAGAAGTTCTCCCCTTC...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAATCGATCTCCTCCTGCTaGTTAAGGATCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQSISSC*LRISCL
Trigger: GAGGCAGCTGATCCTTAAGCAGCAGGAGGAGATCGA...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTTTCAGTCCTGTGACTTaGTTTGCTAGATTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSFSPVT*FARFLL
Trigger: AAGCAAGAATCTAGCAAAGCAAGTCACAGGACTGAA...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTGTCTTTGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCCAGGGTGTCTGTACCGTCTAGAGACCAATaGGTCAGAAGGAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: LSLGFLMCFEAIMSRVSVPSRDQ*VRRRHS
Trigger: ACTGTGCCTCCTTCTGACCCATTGGTCTCTAGACGG...TACAGACACCCTGGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTAACAAAGAGACCTTTTaGCTCTTTCTTGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSNKETF*LFLENR
Trigger: CCTGTTCTCAAGAAAGAGCCAAAAGGTCTCTTTGTT...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCAGAACTTCTGCCGCTTaGAGTCCACAGCGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFRTSAA*SPQRLL
Trigger: AAGAAGGCGCTGTGGACTCCAAGCGGCAGAAGTTCT...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAAGTCTCACATGGCTTCTaGGGTGCTCGCTTAGGTTCT +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQVSHGF*GARLGS
Trigger: AGAACCTAAGCGAGCACCCCAGAAGCCATGTGAGAC...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTGTCTTTGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCCAGGGTGTCTGTAAGAGCAGCCTTGGTCTaGGAAAGTGCATCCCATGAT +
Preference number: 4 (lower is better)
Translates to: LSLGFLMCFEAIMSRVSVRAALV*ESASHD
Trigger: ATCATGGGATGCACTTTCTCAGACCAAGGCTGCTCT...TACAGACACCCTGGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTAGGCCCTTCACTGACTaGGTCTATGCTGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTRPFTD*VYAGTK
Trigger: CTTTGTTCCAGCATAGACTCAGTCAGTGAAGGGCCT...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTGTCTTTGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCCAGGGTGTCTGTATCAATGAGTGGGTTCTaGGCACTTCCAGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LSLGFLMCFEAIMSRVSVSMSGF*ALPVRE
Trigger: TTCCCTCACTGGAAGTGCTCAGAACCCACTCATTGA...TACAGACACCCTGGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAAGATTCTGCATGGACCTaGGCTGTTTTGTTCCGGGTT +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQDSAWT*AVLFRV
Trigger: AACCCGGAACAAAACAGCTCAGGTCCATGCAGAATC...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTGCCTTATTGGCTTCTTaGAGACGTTTGATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LHPSYFTERTYKPHPRASALLAS*RRLISA
Trigger: GGCAGAAATCAAACGTCTTCAAGAAGCCAATAAGGC...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTCATCCTTCAGAGCTCTaGTCCTCCCTTCAATGTCAC +
Preference number: 4 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTHPSEL*SSLQCH
Trigger: GTGACATTGAAGGGAGGATCAGAGCTCTGAAGGATG...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAATTCTGGAGCTCCTTGTaGGCTGTGACCTATCTCTGT +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQFWSSL*AVTYLC
Trigger: ACAGAGATAGGTCACAGCTCACAAGGAGCTCCAGAA...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAAGAGTGGACGCCACTATaGACAGAGAGGCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQEWTPL*TERLFS
Trigger: TGAGAAAAGCCTCTCTGTTCATAGTGGCGTCCACTC...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCAGTCAGTCTCACCTTTaGACCGAAGAGTACCTGGCT +
Preference number: 4 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFSQSHL*TEEYLA
Trigger: AGCCAGGTACTCTTCGGTTCAAAGGTGAGACTGACT...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAATTCATCCAGACAGGCTaGTTCACGTTGGGATCCTCA +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQFIQTG*FTLGSS
Trigger: TGAGGATCCCAACGTGAATCAGCCTGTCTGGATGAA...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCAGCAGGTGGTGCTGTTaGCACTTTCCTGACTTTCGT +
Preference number: 4 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFSRWCC*HFPDFR
Trigger: ACGAAAGTCAGGAAAGTGGCAACAGCACCACCTGCT...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGACTGCTACCTGTTTTaGATTCTGGATTTGATAACT +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHDCYLF*ILDLIT
Trigger: AGTTATCAAATCCAGAATGCAAAACAGGTAGCAGTC...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTATTTGGGGTCCGATTCTaGTCTTCCAATATGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVFGVRF*SSNMAP
Trigger: GGGGGCCATATTGGAAGAGCAGAATCGGACCCCAAA...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAAAAGTCTGGAAAATGCTaGCGCTGGTGGTCGTACAGT +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQKSGKC*RWWSYS
Trigger: ACTGTACGACCACCAGCGGCAGCATTTTCCAGACTT...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTTGCCTTGTTGTCCTCTaGTTCATCATCATCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LHPSYFTERTYKPHPRASCLVVL*FIIISK
Trigger: CTTGCTGATGATGATGAAGCAGAGGACAACAAGGCA...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTATCAGTAAGTGTGCTGTaGTCTGGACTCCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVSVSVL*SGLPGC
Trigger: ACAGCCTGGGAGTCCAGAGCACAGCACACTTACTGA...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTTTTCCAAAGCTCCTCTaGTGCATTATGGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: LHPSYFTERTYKPHPRASFPKLL*CIMDKA
Trigger: AGCCTTGTCCATAATGCAGCAGAGGAGCTTTGGAAA...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTGGAAAATTTGGAAGTTaGAGCACTGGCCCAAGAATC +
Preference number: 4 (lower is better)
Translates to: LHPSYFTERTYKPHPRASGKFGS*STGPRI
Trigger: GATTCTTGGGCCAGTGCTCCAACTTCCAAATTTTCC...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCTCTCTTTCCGTGGTTTaGAAAATTTGGAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCSLSVV*KIWKLE
Trigger: CTCCAACTTCCAAATTTTCCAAACCACGGAAAGAGA...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGGATTTCTCTTTCCGTaGTTTGGAAAATTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHGFLFP*FGKFGS
Trigger: ACTTCCAAATTTTCCAAACCACGGAAAGAGAAATCC...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCGAAACCTTTGTATGCTaGAGCAGGTGGTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFETFVC*SRWCCC
Trigger: GCAACAGCACCACCTGCTCCAGCATACAAAGGTTTC...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTACCCTATCCCCAATGTaGAAATCTAGTAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LHPSYFTERTYKPHPRASTLSPM*KSSSSS
Trigger: AGAGGAGCTACTAGATTTCCACATTGGGGATAGGGT...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCGTTAAGAGAAGGCTTTaGATTGTTCTCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCVKRRL*IVLTSF
Trigger: AAAGGAAGTGAGAACAATTCAAAGCCTTCTCTTAAC...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAATCTTGCCTCACAGCTTaGGCTGAAGAATCTAGCTGT +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQSCLTA*AEESSC
Trigger: ACAGCTAGATTCTTCAGCTCAAGCTGTGAGGCAAGA...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACATCGTCAAAAGCTGCATaGGACACACAGGTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTSSKAA*DTQVPS
Trigger: GCTGGGAACCTGTGTGTCTCATGCAGCTTTTGACGA...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTGTCTTTGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCCAGGGTGTCTGTATGGCACTCTGGGGTCTaGTCATCTCAGGAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LSLGFLMCFEAIMSRVSVWHSGV*SSQEVF
Trigger: AAAAACTTCCTGAGATGATCAGACCCCAGAGTGCCA...TACAGACACCCTGGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTAAGATCTTCCCTTGTCTaGAGAGCCACTCACAGAGTG +
Preference number: 4 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVRSSLV*RATHRV
Trigger: CACTCTGTGAGTGGCTCTTCAGACAAGGGAAGATCT...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAATCATCCGAGTCGTCATaGTGGCCTCTTTTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQSSESS*WPLFFS
Trigger: GGAAAAGAAAAGAGGCCATCATGACGACTCGGATGA...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCCAGAAATCCCTTTCCTaGAAGAAGACACTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCQKSLS*KKTLQN
Trigger: ATTTTGAAGTGTCTTCTTTCAGGAAAGGGATTTCTG...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCTTCTTTTGGATCTTGTaGGAAGAGCTCAAACCAAAA +
Preference number: 4 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCFFWIL*EELKPK
Trigger: TTTTGGTTTGAGCTCTTCTCACAAGATCCAAAAGAA...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTGTTGAAACCTTTGTATaGTGGAGCAGGTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTVETFV*WSRWCC
Trigger: ACAGCACCACCTGCTCCAGCATACAAAGGTTTCAAC...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAACTTTTCCATCAGGAGTaGGAATCTTGGTCTCTGACG +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQLFHQE*ESWSLT
Trigger: CGTCAGAGACCAAGATTCGCACTCCTGATGGAAAAG...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCTTGCTCCATCTTGGGTaGAGGTCCCAGAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFLLHLG*RSQNLL
Trigger: AAGAAGATTCTGGGACCTGCACCCAAGATGGAGCAA...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTAGGTCTTCGCTCTTTTTaGTCCATCTTGGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVGLRSF*SILGAG
Trigger: ACCTGCACCCAAGATGGAGCAAAAAGAGCGAAGACC...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTCATCAAGTCTCTTCTTaGAAGAGGTTGTGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTHQVSS*KRLWRL
Trigger: GAGCCTCCACAACCTCTTGCAAGAAGAGACTTGATG...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTTGTGTACCACCTATGTaGCCAAAAAGTGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: LHPSYFTERTYKPHPRASCVPPM*PKSGKN
Trigger: ATTCTTGCCACTTTTTGGGCACATAGGTGGTACACA...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACAGATTTCCGCTTCTTCTaGATCCAGACGCCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTDFRFF*IQTPLP
Trigger: TGGAAGCGGCGTCTGGATGCAGAAGAAGCGGAAATC...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTGTCTTTGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCCAGGGTGTCTGTAACTGGATGTCTGGACTaGGGTCATCTGTACTGTGAT +
Preference number: 4 (lower is better)
Translates to: LSLGFLMCFEAIMSRVSVTGCLD*GHLYCD
Trigger: ATCACAGTACAGATGACCGCAGTCCAGACATCCAGT...TACAGACACCCTGGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTGTCTTTGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCCAGGGTGTCTGTACTTGATATGGCACTCTaGGGTCTGATCATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LSLGFLMCFEAIMSRVSVLDMAL*GLIISG
Trigger: TCCTGAGATGATCAGACCCCAGAGTGCCATATCAAG...TACAGACACCCTGGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCCTTGTATGTCAGAGCTaGAAGAATCTGTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFLVCQS*KNLSAS
Trigger: GGAGGCAGACAGATTCTTCCAGCTCTGACATACAAG...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CAA 72 bp CCCAAAGCAAAGCTCCCACTTATTTCTGACATCCACTaGGTGCTGCTTAACTTCAAGAATGGAAGAAAATGG +
Preference number: 4 (lower is better)
Translates to: PKAKLPLISDIH*VLLNFKNGRKW
Trigger: CCATTTTCTTCCATTCTTGAAGTTAAGCAGCACCAAGTGGATGTCAGAAATAAGTGGGAGCTTTGCTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CAA 72 bp CTAGAGAATGCTTTGCAATGTGTAACCAAGAAGGCGTaGCAAAGTCCAGAAGGAAAAGCTTTTCCACAGCTT +
Preference number: 4 (lower is better)
Translates to: LENALQCVTKKA*QSPEGKAFPQL
Trigger: AAGCTGTGGAAAAGCTTTTCCTTCTGGACTTTGCAACGCCTTCTTGGTTACACATTGCAAAGCATTCTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTGTCTTTGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCCAGGGTGTCTGTACCTGAAGCCGTATTATaGCTCTTCTTGGCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: LSLGFLMCFEAIMSRVSVPEAVL*LFLAGK
Trigger: TTTACCAGCCAAGAAGAGTCATAATACGGCTTCAGG...TACAGACACCCTGGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTACTGAGGACCTGGTGCTaGAGCCATCTCTGTTTTATT +
Preference number: 4 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVLRTWC*SHLCFI
Trigger: AATAAAACAGAGATGGCTTCAGCACCAGGTCCTCAG...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCAGATTCCAGCTCCTGTaGAAAAACCATCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFRFQLL*KNHLLS
Trigger: ACTGAGGAGATGGTTTTTTCACAGGAGCTGGAATCT...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACATCAGGAACTCTCGGCTaGTCTCAAGTTCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTSGTLG*SQVQQV
Trigger: GACTTGCTGAACTTGAGATCAGCCGAGAGTTCCTGA...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATTCAGCATCCAGAGTCTaGTCAGAGTCTCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDSASRV*SESPTA
Trigger: TGCTGTTGGAGACTCTGAGCAGACTCTGGATGCTGA...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACAACAGGTCTTCCAGTGTaGTCTCAGCATCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTTGLPV*SQHPES
Trigger: AGACTCTGGATGCTGAGAGCACACTGGAAGACCTGT...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATATGTTCAGCAATGGATaGCAAGGACCCTCTGGAACG +
Preference number: 4 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDMFSNG*QGPSGT
Trigger: CGTTCCAGAGGGTCCTTGGCATCCATTGCTGAACAT...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTGTCTTTGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCCAGGGTGTCTGTATCAAAATCACAGCACTaGATATTCCGGTCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: LSLGFLMCFEAIMSRVSVSKSQH*IFRSSR
Trigger: TCGGGAAGACCGGAATATCCAGTGCTGTGATTTTGA...TACAGACACCCTGGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATATCAGATTCTCCAGATaGCTGATACCCAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDIRFSR*LIPRSG
Trigger: GCCAGACCTGGGTATCAGCCATCTGGAGAATCTGAT...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATTCTCATTCTCCTTACTaGGTGGAACGGAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDSHSPY*VERKGC
Trigger: ACAGCCCTTCCGTTCCACCCAGTAAGGAGAATGAGA...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCTGCTCTCCAGTTTCATaGACTCTATTTCTTGTATTT +
Preference number: 4 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCCSPVS*TLFLVF
Trigger: AAATACAAGAAATAGAGTCCATGAAACTGGAGAGCA...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTAACTTCCTCTGCCGTATaGGGAACTGCCAATAATGTC +
Preference number: 4 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVTSSAV*GTANNV
Trigger: GACATTATTGGCAGTTCCCCATACGGCAGAGGAAGT...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTTCCTCTGCTGCATTATaGACAAGGCTTTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTSSAAL*TRLSTS
Trigger: GGAAGTAGAAAGCCTTGTCCATAATGCAGCAGAGGA...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAACTTTTGGCTCTTTCTTaGGAACAGGCTTGTATGTCA +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQLLALS*EQACMS
Trigger: TGACATACAAGCCTGTTCTCAAGAAAGAGCCAAAAG...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTTTTACTCTGGGAGTGTaGAGCAGAATGACTTATCCT +
Preference number: 4 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTFTLGV*SRMTYP
Trigger: AGGATAAGTCATTCTGCTTCACACTCCCAGAGTAAA...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATACAGCTCTCTACTCATaGTTTGAAACTCCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDTALYS*FETPPP
Trigger: AGGAGGCGGAGTTTCAAAGCATGAGTAGAGAGCTGT...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACAATGCTCTTGAGCTTCTaGATGATGCTGCTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTMLLSF*MMLLVS
Trigger: TGAGACCAGCAGCATCATGCAGAAGCTCAAGAGCAT...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACATCTGGAGATGAGGCTTaGAAATGTTCTATCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTSGDEA*KCSIRL
Trigger: CAGCCGGATAGAACATTTGCAAGCCTCATCTCCAGA...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTTTTCTAGTAGCAATTTaGAGTAAGTTTCCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: LHPSYFTERTYKPHPRASFLVAI*SKFPEA
Trigger: GGCTTCAGGAAACTTACTCCAAATTGCTACTAGAAA...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTATGTTCTTCAGTATTTTaGGGTAGGTCTTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVCSSVF*GRSWGG
Trigger: ACCACCCCAAGACCTACCCCAAAATACTGAAGAACA...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCTGCCAATCTGTTTTGTaGTTTGGCTCCTTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFCQSVL*FGSFLR
Trigger: TCTCAAGAAGGAGCCAAACCACAAAACAGATTGGCA...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAAAGAAAGTGCATCCCATaGTGTGGTTACATCTTGAAT +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQRKCIP*CGYILN
Trigger: ATTCAAGATGTAACCACATCATGGGATGCACTTTCT...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACAGTAGTGGGTGTGGCTTaGTTTTGGGTTTTTCGGATA +
Preference number: 4 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTVVGVA*FWVFRI
Trigger: TATCCGAAAAACCCAAAATCAAGCCACACCCACTAC...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTACTTGGAACACTGGGTaGTTGTTCTTCAGTATTTTG +
Preference number: 4 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTTWNTG*LFFSIL
Trigger: CAAAATACTGAAGAACAATCACCCAGTGTTCCAAGT...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCTGTGATTTAACCACCTaGTGTAAAGATTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFCDLTT*CKDSAW
Trigger: CCATGCAGAATCTTTACAGCAGGTGGTTAAATCACA...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATCTCTTCTACTTGTGCTaGCTATGTCTAGACCTTTGC +
Preference number: 4 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDLFYLC*LCLDLC
Trigger: GCAAAGGTCTAGACATAGGCAGCACAAGTAGAAGAG...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCTATGTGCCCAAAAAGTaGCAAGAATTTCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFYVPKK*QEFLSF
Trigger: GAAGCTGAGAAATTCTTGCCACTTTTTGGGCACATA...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCATCTGTTTTGTGGTTTaGCTCCTTCTTGAGACTAAG +
Preference number: 4 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFICFVV*LLLETK
Trigger: CTTAGTCTCAAGAAGGAGCCAAACCACAAAACAGAT...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTAGAGTGTGAAGCAGAATaGCTTATCCTATCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVECEAE*LILSVS
Trigger: TGAAACAGATAGGATAAGTCATTCTGCTTCACACTC...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACATGTTGCAATAGAAGTTaGGTCTTTCTCATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTCCNRS*VFLIRQ
Trigger: CTGCCTGATGAGAAAGACTCAACTTCTATTGCAACA...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTATGTACATGGGTATACATGGGACTTCATCCCAGTTATTTTACAGAGCGTACTATGTTAAATCTACGATaGCTCTCAGAAGGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: LCTWVYMGLHPSYFTERTMLNLR*LSEGSR
Trigger: TCTACTACCTTCTGAGAGTCATCGTAGATTTAACAT...AGTACGCTCTGTAAAATAACTGGGATGAAGTCCCATGTATACCCATGTACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTATCTGCCTTTTCTTGCTaGAGTCTTAAAAGCAAACCA +
Preference number: 4 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVSAFSC*SLKSKP
Trigger: TGGTTTGCTTTTAAGACTTCAGCAAGAAAAGGCAGA...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCTCTATCTTTATCCACTaGGGCATCTGTATTATGCAT +
Preference number: 4 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFSIFIH*GICIMH
Trigger: ATGCATAATACAGATGCCTCAGTGGATAAAGATAGA...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAATACCATGCTTGTCTTTaGACACAAAATACACAATCC +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQYHACL*TQNTQS
Trigger: GGATTGTGTATTTTGTGTGCAAAGACAAGCATGGTA...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAAGGAGCAAAAATACCATaGTTGTCTTTGCACACAAAA +
Preference number: 4 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQGAKIP*LSLHTK
Trigger: TTTTGTGTGCAAAGACAAGCATGGTATTTTTGCTCC...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACAACTGCCGAGGTCTTCTaGAATACAACTTTCACTGTT +
Preference number: 4 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTTAEVF*NTTFTV
Trigger: AACAGTGAAAGTTGTATTCCAGAAGACCTCGGCAGT...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTAGTGACCTTTCTGATATaGCTCTCTCAGAACATGATA +
Preference number: 4 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVVTFLI*LSQNMI
Trigger: TATCATGTTCTGAGAGAGCCATATCAGAAAGGTCAC...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACACAGGCTGATTCACGTTaGGATCCTCAGCAAATATTT +
Preference number: 4 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTQADSR*DPQQIF
Trigger: AAATATTTGCTGAGGATCCCAACGTGAATCAGCCTG...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
3UTR CAA 72 bp AAGAACAAACGTGCATACTTAAGGGTTACGCTGTCTTaGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCC +
Preference number: 4 (lower is better)
Translates to: KNKRAYLRVTLS*GFLMCFEAIMS
Trigger: GGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAGCGTAACCCTTAAGTATGCACGTTTGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR TCA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATTGGAAGGGACAGAGCTaGTTTCACTATATTAGTTTC +
Preference number: 4 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDWKGQS*FHYISF
Trigger: GAAACTAATATAGTGAAATCAGCTCTGTCCCTTCCA...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR GCA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACAGAGGCATCTGTATTATaGATACTAGGAAGTGACTTC +
Preference number: 4 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTEASVL*ILGSDF
Trigger: GAAGTCACTTCCTAGTATGCATAATACAGATGCCTC...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp GCCGCTTCCACTCCAGGAGCTCCTCTGCGTGCTGGCGGCGCTGCATaGGCTTCTGTTCTCGCTTCGTCAGGAACTTCTCGTCCATGCGGC +
Preference number: 5 (lower is better)
Translates to: AASTPGAPLRAGGAA*ASVLASSGTSRPCG
Trigger: GCCGCATGGACGAGAAGTTCCTGACGAAGCGAGAACAGAAGCTCATGCAGCGCCGCCAGCACGCAGAGGAGCTCCTGGAGTGGAAGCGGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp GCTGAGGAGGAGCGAGTGGACCCAGCAGAGCGAGCTCCCGAGGAGTaGTGGGAGGTAGCATCCACAGAGGCAAGGTCACAGGCAAACTGT +
Preference number: 5 (lower is better)
Translates to: AEEERVDPAERAPEE*WEVASTEARSQANC
Trigger: ACAGTTTGCCTGTGACCTTGCCTCTGTGGATGCTACCTCCCAGCACTCCTCGGGAGCTCGCTCTGCTGGGTCCACTCGCTCCTCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp AGACGCCGCTTCCACTCCAGGAGCTCCTCTGCGTGCTGGCGGCGCTaGATGAGCTTCTGTTCTCGCTTCGTCAGGAACCTGACCAACTGG +
Preference number: 5 (lower is better)
Translates to: RRRFHSRSSSACWRR*MSFCSRFVRNLTNW
Trigger: CCAGTTGGTCAGGTTCCTGACGAAGCGAGAACAGAAGCTCATGCAGCGCCGCCAGCACGCAGAGGAGCTCCTGGAGTGGAAGCGGCGTCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129865.9
CDS GCA 90 bp AGACGCCGCTTCCACTCCAGGAGCTCCTCTGCGTGCTGGCGGCGCTaGATGAGCTTCTGTTCTCGCTTCGTCAGGAACTTCTCGTCCATG +
Preference number: 5 (lower is better)
Translates to: RRRFHSRSSSACWRR*MSFCSRFVRNFSSM
Trigger: CATGGACGAGAAGTTCCTGACGAAGCGAGAACAGAAGCTCATGCAGCGCCGCCAGCACGCAGAGGAGCTCCTGGAGTGGAAGCGGCGTCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp GAGGGCAATGCCCCTAACTCTCTCCACGTCGGACAGCTGGCGCACTaGCTCCTCGAGAGCACTCAGGTAACTGAGTTCTGCAGCCATGCG +
Preference number: 5 (lower is better)
Translates to: EGNAPNSLHVGQLAH*LLESTQVTEFCSHA
Trigger: CGCATGGCTGCAGAACTCAGTTACCTGAGTGCTCTCGAGGAGTCAGTGCGCCAGCTGTCCGACGTGGAGAGAGTTAGGGGCATTGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp CGGGGAAGGACTGCGGGTCTCCAAGCCGGGTGGCCCAGGACTAGCTaGCTTGTTGTCCTCTGCTTCATCATCATCAGCAAGAGAGCCCAA +
Preference number: 5 (lower is better)
Translates to: RGRTAGLQAGWPRTS*LVVLCFIIISKRAQ
Trigger: TTGGGCTCTCTTGCTGATGATGATGAAGCAGAGGACAACAAGGCAGCTAGTCCTGGGCCACCCGGCTTGGAGACCCGCAGTCCTTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp GCTTCCAGACCCGGTGGCTCTGCTTCTGGAGCTCCTTGTGAGCTGTaGCCTATCTCTGTGAGACTGAGAGTCCTTCCTGAGCGACGATGG +
Preference number: 5 (lower is better)
Translates to: ASRPGGSASGAPCEL*PISVRLRVLPERRW
Trigger: CCATCGTCGCTCAGGAAGGACTCTCAGTCTCACAGAGATAGGTCACAGCTCACAAGGAGCTCCAGAAGCAGAGCCACCGGGTCTGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp GGACGCCACTATGAACAGAGAGGCTTTTCTCACCGAGACACTCGCTaGTCTCCTCATCGCTTCCAGACCCGGTGGCTCTGCTTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: GRHYEQRGFSHRDTR*SPHRFQTRWLCFWS
Trigger: GCTCCAGAAGCAGAGCCACCGGGTCTGGAAGCGATGAGGAGATCAGCGAGTGTCTCGGTGAGAAAAGCCTCTCTGTTCATAGTGGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 90 bp GCTGGAAATCGATATCGGGGAAGGACTGCGGGTCTCCAAGCCGGGTaGCCCAGGACTAGCTGCCTTGTTGTCCTCTGCTTCATCATCATC +
Preference number: 5 (lower is better)
Translates to: AGNRYRGRTAGLQAG*PRTSCLVVLCFIII
Trigger: GATGATGATGAAGCAGAGGACAACAAGGCAGCTAGTCCTGGGCCACCCGGCTTGGAGACCCGCAGTCCTTCCCCGATATCGATTTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp GTGGGTGACCTGAGCTCCAGCAGCCTTTCCGAGTGGACGCCACTATaGACAGAGAGGCTTTTCTCACCGAGACACTCGCTGATCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VGDLSSSSLSEWTPL*TERLFSPRHSLISS
Trigger: TGAGGAGATCAGCGAGTGTCTCGGTGAGAAAAGCCTCTCTGTTCATAGTGGCGTCCACTCGGAAAGGCTGCTGGAGCTCAGGTCACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp CCACGTCGCTGCGCTCCTTACTCTTCATTAGCTCTGTGGGTGACCTaGGCTCCAGCAGCCTTTCCGAGTGGACGCCACTATGAACAGAGA +
Preference number: 5 (lower is better)
Translates to: PRRCAPYSSLALWVT*APAAFPSGRHYEQR
Trigger: TCTCTGTTCATAGTGGCGTCCACTCGGAAAGGCTGCTGGAGCTCAGGTCACCCACAGAGCTAATGAAGAGTAAGGAGCGCAGCGACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp TGCTCTCAGCATCCAGAGTCTGCTCAGAGTCTCCAACAGCAAGTTTaGTGCCAGTCCCAAGCTTCCTGCTTGGATGGGAGCCGCGTTCTG +
Preference number: 5 (lower is better)
Translates to: CSQHPESAQSLQQQV*CQSQASCLDGSRVL
Trigger: CAGAACGCGGCTCCCATCCAAGCAGGAAGCTTGGGACTGGCAGCAAACTTGCTGTTGGAGACTCTGAGCAGACTCTGGATGCTGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp CTGAGCATGTGGAGTCCCCACTCTCTCTGCATCCTTGCTCAGGGATaGCTCCTGCTGACTGGATGTCTGGACTGCGGTCATCTGTACTGT +
Preference number: 5 (lower is better)
Translates to: LSMWSPHSLCILAQG*LLLTGCLDCGHLYC
Trigger: ACAGTACAGATGACCGCAGTCCAGACATCCAGTCAGCAGGAGGCATCCCTGAGCAAGGATGCAGAGAGAGTGGGGACTCCACATGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp TGTAGGCTCCATCAAGTCTCTTCTTGCAAGAGGTTGTGGAGGCTCTaGCAGGGACAGGTCACTACTGGAAGACGCACTTGGGGGACGCTC +
Preference number: 5 (lower is better)
Translates to: CRLHQVSSCKRLWRL*QGQVTTGRRTWGTL
Trigger: GAGCGTCCCCCAAGTGCGTCTTCCAGTAGTGACCTGTCCCTGTCAGAGCCTCCACAACCTCTTGCAAGAAGAGACTTGATGGAGCCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp TCTCAGCATCCAGAGTCTGCTCAGAGTCTCCAACAGCAAGTTTGCTaGCAGTCCCAAGCTTCCTGCTTGGATGGGAGCCGCGTTCTGAGT +
Preference number: 5 (lower is better)
Translates to: SQHPESAQSLQQQVC*QSQASCLDGSRVLS
Trigger: ACTCAGAACGCGGCTCCCATCCAAGCAGGAAGCTTGGGACTGGCAGCAAACTTGCTGTTGGAGACTCTGAGCAGACTCTGGATGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp TGCAGTTTTATGGTGGTCTGGCGGATCCTCTCGATCTCCTCCTGCTaGTTAAGGATCAGCTGCCTCTCTTTCCGGGCTGCCTTATTGGCT +
Preference number: 5 (lower is better)
Translates to: CSFMVVWRILSISSC*LRISCLSFRAALLA
Trigger: AGCCAATAAGGCAGCCCGGAAAGAGAGGCAGCTGATCCTTAAGCAGCAGGAGGAGATCGAGAGGATCCGCCAGACCACCATAAAACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp TCCTGCAGTTTTATGGTGGTCTGGCGGATCCTCTCGATCTCCTCCTaGTGCTTAAGGATCAGCTGCCTCTCTTTCCGGGCTGCCTTATTG +
Preference number: 5 (lower is better)
Translates to: SCSFMVVWRILSISS*CLRISCLSFRAALL
Trigger: CAATAAGGCAGCCCGGAAAGAGAGGCAGCTGATCCTTAAGCAGCAGGAGGAGATCGAGAGGATCCGCCAGACCACCATAAAACTGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp GCAAGAGAGCCCAATTTCTTCTCCCCTGCAGACTTGAGCTTCTCCTaGAGTTTTATGGTGGTCTGGCGGATCCTCTCGATCTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: AREPNFFSPADLSFS*SFMVVWRILSISSC
Trigger: GCAGGAGGAGATCGAGAGGATCCGCCAGACCACCATAAAACTGCAGGAGAAGCTCAAGTCTGCAGGGGAGAAGAAATTGGGCTCTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp GGCAGCCAAAGCTTGTTTTTCCATTTGTTGGATTTCCGCTTCTTCTaGATCCAGACGCCGCTTCCACTCCAGGAGCTCCTCTGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: GSQSLFFHLLDFRFF*IQTPLPLQELLCVL
Trigger: CAGCACGCAGAGGAGCTCCTGGAGTGGAAGCGGCGTCTGGATGCAGAAGAAGCGGAAATCCAACAAATGGAAAAACAAGCTTTGGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS TCA 90 bp TTCTCCTTTAAGGCCTTTTCTCGAAGACGCAGAAGTGAGGACTGGTaGGCTGCGCGCACTTCCTCTTCCTTCATGTACTGCCGCACCATC +
Preference number: 5 (lower is better)
Translates to: FSFKAFSRRRRSEDW*AARTSSSFMYCRTI
Trigger: GATGGTGCGGCAGTACATGAAGGAAGAGGAAGTGCGCGCAGCTCACCAGTCCTCACTTCTGCGTCTTCGAGAAAAGGCCTTAAAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp GCTCAGAGTCTCCAACAGCAAGTTTGCTGCCAGTCCCAAGCTTCCTaGTTGGATGGGAGCCGCGTTCTGAGTCTGACTGTACTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: AQSLQQQVCCQSQAS*LDGSRVLSLTVLFP
Trigger: AGGAAAAAGTACAGTCAGACTCAGAACGCGGCTCCCATCCAAGCAGGAAGCTTGGGACTGGCAGCAAACTTGCTGTTGGAGACTCTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp TGTCTGAAGAGCCACTCACAGAGTGCCCAGACAGGTCTTCCAGTGTaGTCTCAGCATCCAGAGTCTGCTCAGAGTCTCCAACAGCAAGTT +
Preference number: 5 (lower is better)
Translates to: CLKSHSQSAQTGLPV*SQHPESAQSLQQQV
Trigger: AACTTGCTGTTGGAGACTCTGAGCAGACTCTGGATGCTGAGAGCACACTGGAAGACCTGTCTGGGCACTCTGTGAGTGGCTCTTCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp TCTCGGCTGATCTCAAGTTCAGCAAGTCTCTTAGCTAGCTCTTCCTaGCCACTGGCACCAAACACTGGGCTCTCAGGTCTGGGACACATA +
Preference number: 5 (lower is better)
Translates to: SRLISSSASLLASSS*PLAPNTGLSGLGHI
Trigger: TATGTGTCCCAGACCTGAGAGCCCAGTGTTTGGTGCCAGTGGGCAGGAAGAGCTAGCTAAGAGACTTGCTGAACTTGAGATCAGCCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp GTCAGGAACTTCTCGTCCATGCGGCTTCTCATGCTCTTGAGCTTCTaGATGATGCTGCTGGTCTCACTGCTGGAAATCGATATCGGGGAA +
Preference number: 5 (lower is better)
Translates to: VRNFSSMRLLMLLSF*MMLLVSLLEIDIGE
Trigger: TTCCCCGATATCGATTTCCAGCAGTGAGACCAGCAGCATCATGCAGAAGCTCAAGAGCATGAGAAGCCGCATGGACGAGAAGTTCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp TGCATCCTTGCTCAGGGATGCCTCCTGCTGACTGGATGTCTGGACTaGGGTCATCTGTACTGTGATTGGACTGATCCTCTTTCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: CILAQGCLLLTGCLD*GHLYCDWTDPLSVL
Trigger: AAGCACTGAAAGAGGATCAGTCCAATCACAGTACAGATGACCGCAGTCCAGACATCCAGTCAGCAGGAGGCATCCCTGAGCAAGGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 90 bp AAGACTCAGAGTAACTGTCACGGGAAGGGGAGAACTTCTGCCGCTTaGAGTCCACAGCGCCTTCTTTACTCTGGGAGTGTGAAGCAGAAT +
Preference number: 5 (lower is better)
Translates to: KTQSNCHGKGRTSAA*SPQRLLYSGSVKQN
Trigger: ATTCTGCTTCACACTCCCAGAGTAAAGAAGGCGCTGTGGACTCCAAGCGGCAGAAGTTCTCCCCTTCCCGTGACAGTTACTCTGAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 90 bp TCCTCTGCTGCATTATGGACAAGGCTTTCTACTTCCTCTGCCGTATaGGGAACTGCCAATAATGTCTCACATGGCTTCTGGGGTGCTCGC +
Preference number: 5 (lower is better)
Translates to: SSAALWTRLSTSSAV*GTANNVSHGFWGAR
Trigger: GCGAGCACCCCAGAAGCCATGTGAGACATTATTGGCAGTTCCCCATACGGCAGAGGAAGTAGAAAGCCTTGTCCATAATGCAGCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGTACAATAGACATGCTTaGACTCCAGATGACTGGGAC +
Preference number: 5 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWYNRHA*TPDDWD
Trigger: GTCCCAGTCATCTGGAGTCAAAGCATGTCTATTGTA...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCACAGAGAGGCCGCTGTaGCTTTCAGGGCTTCAATAC +
Preference number: 5 (lower is better)
Translates to: LAATVRVKAFTHTPQIILTERPL*LSGLQY
Trigger: GTATTGAAGCCCTGAAAGCAACAGCGGCCTCTCTGT...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATTTGTTTCCTTCAGGCTaGTCCAGCTCCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHLFPSG*SSSTPA
Trigger: GGCTGGAGTGGAGCTGGACAAGCCTGAAGGAAACAA...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp CATCATCATCAGCAAGAGAGCCCAATTTCTTCTCCCCTGCAGACTTaGGCTTCTCCTGCAGTTTTATGGTGGTCTGGCGGATCCTCTCGA +
Preference number: 5 (lower is better)
Translates to: HHHQQESPISSPLQT*ASPAVLWWSGGSSR
Trigger: TCGAGAGGATCCGCCAGACCACCATAAAACTGCAGGAGAAGCTCAAGTCTGCAGGGGAGAAGAAATTGGGCTCTCTTGCTGATGATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp TCAGAGGCCAGGTCTAGTTTCAGTAGGACTTCAGATCCGCCTGACTaGTTACAGCAGGCATCTTCAACCTCACTGCTCTCCAGTTTCATG +
Preference number: 5 (lower is better)
Translates to: SEARSSFSRTSDPPD*LQQASSTSLLSSFM
Trigger: CATGAAACTGGAGAGCAGTGAGGTTGAAGATGCCTGCTGTAAGCAGTCAGGCGGATCTGAAGTCCTACTGAAACTAGACCTGGCCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp GCCATGAAGGTCCTGACCCAACTCTTTCCATTTCCAAAGCTCCTCTaGTGCATTATGGACAAGGCTTTCTACTTCCTCTGCCGTATGGGG +
Preference number: 5 (lower is better)
Translates to: AMKVLTQLFPFPKLL*CIMDKAFYFLCRMG
Trigger: CCCCATACGGCAGAGGAAGTAGAAAGCCTTGTCCATAATGCAGCAGAGGAGCTTTGGAAATGGAAAGAGTTGGGTCAGGACCTTCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 90 bp TCTCCAACAGCAAGTTTGCTGCCAGTCCCAAGCTTCCTGCTTGGATaGGAGCCGCGTTCTGAGTCTGACTGTACTTTTTCCTCATCAATG +
Preference number: 5 (lower is better)
Translates to: SPTASLLPVPSFLLG*EPRSESDCTFSSSM
Trigger: CATTGATGAGGAAAAAGTACAGTCAGACTCAGAACGCGGCTCCCATCCAAGCAGGAAGCTTGGGACTGGCAGCAAACTTGCTGTTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTCTCTCTACTCATGCTTaGAAACTCCGCCTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSLSTHA*KLRLLP
Trigger: TGGCAGGAGGCGGAGTTTCAAAGCATGAGTAGAGAG...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGTCGTTCGCTGTTATTTaGTCTGGCTTTCTTTTCACG +
Preference number: 5 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWSFAVI*SGFLFT
Trigger: CGTGAAAAGAAAGCCAGACAAAATAACAGCGAACGA...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTTGTGTGGACTTCCCTTaGCCAGTTCTTCCCATGGTC +
Preference number: 5 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSCVDFP*PVLPMV
Trigger: GACCATGGGAAGAACTGGCAAAGGGAAGTCCACACA...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp CACTTCCTGGAGAGGAGACAAAATCATCTTCATAGGAAACGCTGCTaGGTGGGGTTGCGGTGGCATTCAAAGGCCGTGATACCAATGTTC +
Preference number: 5 (lower is better)
Translates to: HFLERRQNHLHRKRC*VGLRWHSKAVIPMF
Trigger: GAACATTGGTATCACGGCCTTTGAATGCCACCGCAACCCCACTCAGCAGCGTTTCCTATGAAGATGATTTTGTCTCCTCTCCAGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp CTCCTGAACGCCCAAGCTGCTACCATCAACTTGGGATTCAAGAGTTaGCTTCCTTTCTGTCAGTGTCCCACTTCCTGGAGAGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: LLNAQAATINLGFKS*LPFCQCPTSWRGDK
Trigger: TTTGTCTCCTCTCCAGGAAGTGGGACACTGACAGAAAGGAAGTCAACTCTTGAATCCCAAGTTGATGGTAGCAGCTTGGGCGTTCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp CCGCACCATCTCCATGGTGAACTTAGAAAAGCTATCCTGTCCTCCTaGGAATGGCATGCTCAGCTCCTTGGTAGAAGACAGAGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: PHHLHGELRKAILSS*EWHAQLLGRRQSSL
Trigger: AAGACTGCTCTGTCTTCTACCAAGGAGCTGAGCATGCCATTCTCAGGAGGACAGGATAGCTTTTCTAAGTTCACCATGGAGATGGTGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp ATATTCACTAAGGCTGCCTACACCAGGAAGCTCATCGTCAAAAGCTaGATGAGACACACAGGTTCCCAGCATCTTCTGAATCCGGGCAGA +
Preference number: 5 (lower is better)
Translates to: IFTKAAYTRKLIVKS*MRHTGSQHLLNPGR
Trigger: TCTGCCCGGATTCAGAAGATGCTGGGAACCTGTGTGTCTCATGCAGCTTTTGACGATGAGCTTCCTGGTGTAGGCAGCCTTAGTGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 90 bp TTCCAGGGTGGTAGCCCTGAGAGGACTACGGGATTTCTCTTTCCGTaGTTTGGAAAATTTGGAAGTTGGAGCACTGGCCCAAGAATCATC +
Preference number: 5 (lower is better)
Translates to: FQGGSPERTTGFLFP*FGKFGSWSTGPRII
Trigger: GATGATTCTTGGGCCAGTGCTCCAACTTCCAAATTTTCCAAACCACGGAAAGAGAAATCCCGTAGTCCTCTCAGGGCTACCACCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS CCA 90 bp TCCTCTGCCGTATGGGGAACTGCCAATAATGTCTCACATGGCTTCTaGGGTGCTCGCTTAGGTTCTGCCATTAGAGGTACGATTGTTTCT +
Preference number: 5 (lower is better)
Translates to: SSAVWGTANNVSHGF*GARLGSAIRGTIVS
Trigger: AGAAACAATCGTACCTCTAATGGCAGAACCTAAGCGAGCACCCCAGAAGCCATGTGAGACATTATTGGCAGTTCCCCATACGGCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCGACGGGTTGAAACCTTaGTATGCTGGAGCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCDGLKP*YAGAGG
Trigger: ACCACCTGCTCCAGCATACAAAGGTTTCAACCCGTC...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCTTGGTCTCTGACGGGTaGAAACCTTTGTATGCTGGA +
Preference number: 5 (lower is better)
Translates to: LAATVRVKAFTHTPQIILLVSDG*KPLYAG
Trigger: TCCAGCATACAAAGGTTTCAACCCGTCAGAGACCAA...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTTCTTTTTGCTCCATCTaGGGTGCAGGTCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSSFCSI*GAGPRI
Trigger: GATTCTGGGACCTGCACCCAAGATGGAGCAAAAAGA...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp TCTTTCACAGGTGGACTGATAGCTTTAGTCCAAGGTCCATTCTCTTaGGGTGCTAGCTTCACATCACACTCGGTGTTCCACACTGACCCA +
Preference number: 5 (lower is better)
Translates to: SFTGGLIALVQGPFS*GASFTSHSVFHTDP
Trigger: TGGGTCAGTGTGGAACACCGAGTGTGATGTGAAGCTAGCACCTCAAGAGAATGGACCTTGGACTAAAGCTATCAGTCCACCTGTGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp AAAATCTTCAGAGTAGGACGACTCTTTAGGAACAGAAAGCTGTCCTaGGCATGTGGAGTCCCCACTCTCTCTGCATCCTTGCTCAGGGAT +
Preference number: 5 (lower is better)
Translates to: KIFRVGRLFRNRKLS*ACGVPTLSASLLRD
Trigger: ATCCCTGAGCAAGGATGCAGAGAGAGTGGGGACTCCACATGCTCAGGACAGCTTTCTGTTCCTAAAGAGTCGTCCTACTCTGAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp ATGAAGGTCCTGACCCAACTCTTTCCATTTCCAAAGCTCCTCTGCTaGATTATGGACAAGGCTTTCTACTTCCTCTGCCGTATGGGGAAC +
Preference number: 5 (lower is better)
Translates to: MKVLTQLFPFPKLLC*IMDKAFYFLCRMGN
Trigger: GTTCCCCATACGGCAGAGGAAGTAGAAAGCCTTGTCCATAATGCAGCAGAGGAGCTTTGGAAATGGAAAGAGTTGGGTCAGGACCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 90 bp GAACCCTTTAGCAAAGTCAGTCTCACCTTTGAACCGAAGAGTACCTaGCTGAACACTGCCGATCAACACCCTATCCCCAATGTGGAAATC +
Preference number: 5 (lower is better)
Translates to: EPFSKVSLTFEPKST*LNTADQHPIPNVEI
Trigger: GATTTCCACATTGGGGATAGGGTGTTGATCGGCAGTGTTCAGCCAGGTACTCTTCGGTTCAAAGGTGAGACTGACTTTGCTAAAGGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCCCATCAAGTCTCTTCTaGCAAGAGGTTGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCPSSLF*QEVVEA
Trigger: AGCCTCCACAACCTCTTGCAAGAAGAGACTTGATGG...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCAGGCTAGTTCGGCCTTaGTCTTCTCCTTTAAGGCCT +
Preference number: 5 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCRLVRP*SSPLRP
Trigger: AGGCCTTAAAGGAGAAGACAAAGGCCGAACTAGCCT...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CAAAGGAGGAGACTGGCTTACTCCCGCCTCGCATCTGGAATGCAGGGTTCTTGGCAGATTTCCAAGTTTTaGCTGTTTCAGATCTGTGTA +
Preference number: 5 (lower is better)
Translates to: QRRRLAYSRLASGMQGSWQISKF*LFQICV
Trigger: TACACAGATCTGAAACAGCAAAAACTTGGAAATCTG...CCAAGAACCCTGCATTCCAGATGCGAGGCGGGAGTAAGCCAGTCTCCTCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTAGTCTTGCTGCACATTaGCAGAGTCTGAGGGAAGTT +
Preference number: 5 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSSLAAH*QSLREV
Trigger: AACTTCCCTCAGACTCTGCAAATGTGCAGCAAGACT...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCTGGTTTGGCTCCTTCTaGAGACTAAGCAGTTTGAGT +
Preference number: 5 (lower is better)
Translates to: LAATVRVKAFTHTPQIILWFGSF*RLSSLS
Trigger: ACTCAAACTGCTTAGTCTCAAGAAGGAGCCAAACCA...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp CCTTTAGCAAAGTCAGTCTCACCTTTGAACCGAAGAGTACCTGGCTaGACACTGCCGATCAACACCCTATCCCCAATGTGGAAATCTAGT +
Preference number: 5 (lower is better)
Translates to: PLAKSVSPLNRRVPG*TLPINTLSPMWKSS
Trigger: ACTAGATTTCCACATTGGGGATAGGGTGTTGATCGGCAGTGTTCAGCCAGGTACTCTTCGGTTCAAAGGTGAGACTGACTTTGCTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp GACTCTGTCTGTGCTTTTCTAGATGACAGATCTGGAGATGAGGCTTaGAAATGTTCTATCCGGCTGTCCAACTCAACCCCTCTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: DSVCAFLDDRSGDEA*KCSIRLSNSTPLFA
Trigger: TGCAAAGAGAGGGGTTGAGTTGGACAGCCGGATAGAACATTTGCAAGCCTCATCTCCAGATCTGTCATCTAGAAAAGCACAGACAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCCGACTGCTACCTGTTTaGCATTCTGGATTTGATAAC +
Preference number: 5 (lower is better)
Translates to: LAATVRVKAFTHTPQIILRLLPV*HSGFDN
Trigger: GTTATCAAATCCAGAATGCAAAACAGGTAGCAGTCG...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTCGGCTTCTCATGCTCTaGAGCTTCTGCATGATGCTG +
Preference number: 5 (lower is better)
Translates to: LHPSYFTERTYKPHPRASRLLML*SFCMML
Trigger: CAGCATCATGCAGAAGCTCAAGAGCATGAGAAGCCG...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAAACTCTCTCTGCATCCTaGCTCAGGGATGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQTLSAS*LRDASC
Trigger: GCAGGAGGCATCCCTGAGCAAGGATGCAGAGAGAGT...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTTTCTGCCAATCTGTTTaGTGGTTTGGCTCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSFCQSV*WFGSFL
Trigger: CAAGAAGGAGCCAAACCACAAAACAGATTGGCAGAA...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp CGTTCTGAGTCTGACTGTACTTTTTCCTCATCAATGAGTGGGTTCTaGGCACTTCCAGTGAGGGAATCCAACCAGTCCATCTTGTCTTTC +
Preference number: 5 (lower is better)
Translates to: RSESDCTFSSSMSGF*ALPVRESNQSILSF
Trigger: GAAAGACAAGATGGACTGGTTGGATTCCCTCACTGGAAGTGCTCAGAACCCACTCATTGATGAGGAAAAAGTACAGTCAGACTCAGAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp AGAGACGGAATACTGTCACTTCGTAAGGAATCATCTGCGGCTGTCTaGAACTGTTCATCAACTGAGCTCTCCATCTTCTCACCATGGAAT +
Preference number: 5 (lower is better)
Translates to: RDGILSLRKESSAAV*NCSSTELSIFSPWN
Trigger: ATTCCATGGTGAGAAGATGGAGAGCTCAGTTGATGAACAGTTGCAGACAGCCGCAGATGATTCCTTACGAAGTGACAGTATTCCGTCTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCTGGAAAATTTGGAAGTaGGAGCACTGGCCCAAGAAT +
Preference number: 5 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCWKIWK*EHWPKN
Trigger: ATTCTTGGGCCAGTGCTCCAACTTCCAAATTTTCCA...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATAGCGAGGGGCTGGGCTaGAGAACTGTGAACTCGAGG +
Preference number: 5 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDSEGLG*RTVNSR
Trigger: CCTCGAGTTCACAGTTCTCAAGCCCAGCCCCTCGCT...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTTGCCTTATTGGCTTCTaGAAGACGTTTGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSCLIGF*KTFDFC
Trigger: GCAGAAATCAAACGTCTTCAAGAAGCCAATAAGGCA...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTGGACTAGCTGCCTTGTaGTCCTCTGCTTCATCATCA +
Preference number: 5 (lower is better)
Translates to: LHPSYFTERTYKPHPRASGLAAL*SSASSS
Trigger: TGATGATGAAGCAGAGGACAACAAGGCAGCTAGTCC...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTAGCCGCGACTGTTAGGGTTAAGGCATTTACACACACGCCTCAGATCATCCTCTTCTGCCTTATTCTTTaGGATCTTGTGAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: LAATVRVKAFTHTPQIILFCLIL*DLVRRA
Trigger: AGCTCTTCTCACAAGATCCAAAAGAATAAGGCAGAA...GAGGATGATCTGAGGCGTGTGTGTAAATGCCTTAACCCTAACAGTCGCGGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp GTCACCGAGTTGTCAACATTAACAACCATTACTGGATGGTCAATATaGCCTAGAGTCTGGGCCTGGCCGTTTATTTCTTCTGAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: VTELSTLTTITGWSI*PRVWAWPFISSECS
Trigger: GGAACACTCAGAAGAAATAAACGGCCAGGCCCAGACTCTAGGTCATATTGACCATCCAGTAATGGTTGTTAATGTTGACAACTCGGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS GCA 90 bp TTTCTTAGCCTCACTCTCAATCCTACTGGACAGAGAGGCCGCTGTTaGTTTCAGGGCTTCAATACGATCCAGTTTAGTCTTATATTGGCT +
Preference number: 5 (lower is better)
Translates to: FLSLTLNPTGQRGRC*FQGFNTIQFSLILA
Trigger: AGCCAATATAAGACTAAACTGGATCGTATTGAAGCCCTGAAAGCAACAGCGGCCTCTCTGTCCAGTAGGATTGAGAGTGAGGCTAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp CTTTTGTTAAATCAAAAACCGCCTGTTTGTAGACTCTTCTACTTGTaGTGCCTATGTCTAGACCTTTGCTGGCACCACCAAGGAACGTGG +
Preference number: 5 (lower is better)
Translates to: LLLNQKPPVCRLFYL*CLCLDLCWHHQGTW
Trigger: CCACGTTCCTTGGTGGTGCCAGCAAAGGTCTAGACATAGGCAGCACAAGTAGAAGAGTCTACAAACAGGCGGTTTTTGATTTAACAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATTTATCATCCTCTCCTTaGTCTCGTAGATGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHLSSSP*SRRCFF
Trigger: GAAAAAGCATCTACGAGACAAAGGAGAGGATGATAA...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCGGGTGGTACTTTCTTTaGGTCAAGAAACTCCTGATT +
Preference number: 5 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCGWYFL*VKKLLI
Trigger: AATCAGGAGTTTCTTGACCAAAAGAAAGTACCACCC...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp CCATCATTTAAAAATCTAACAACTGTATCACTGATGACCGAGGGCTaGGCACTCTCAAAATCACAGCACTGGATATTCCGGTCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: PSFKNLTTVSLMTEG*ALSKSQHWIFRSSR
Trigger: TCGGGAAGACCGGAATATCCAGTGCTGTGATTTTGAGAGTGCTCAGCCCTCGGTCATCAGTGATACAGTTGTTAGATTTTTAAATGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS TCA 90 bp AATGACTTATCCTATCTGTTTCAGCTTTGGTCCTCAGTTTTCTCATaGAGTCTGGAAAATGCTGCCGCTGGTGGTCGTACAGTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: NDLSYLFQLWSSVFS*SLENAAAGGRTVLL
Trigger: TAGCAACACTGTACGACCACCAGCGGCAGCATTTTCCAGACTTCATGAGAAAACTGAGGACCAAAGCTGAAACAGATAGGATAAGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp ATCAACATGTTCAGCAATGGATGCCAAGGACCCTCTGGAACGCTCTaGCTCTGTTACAGATTTCCAAGTTTTTGCTGTTTCAGATCTGTG +
Preference number: 5 (lower is better)
Translates to: INMFSNGCQGPSGTL*LCYRFPSFCCFRSV
Trigger: CACAGATCTGAAACAGCAAAAACTTGGAAATCTGTAACAGAGTCAGAGCGTTCCAGAGGGTCCTTGGCATCCATTGCTGAACATGTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS CCA 90 bp CACTTCTGTCATTCGATGTGGGTCTTCGCTCTTTTTGCTCCATCTTaGGTGCAGGTCCCAGAATCTTCTTTACTAATTTTTGTCCATCTC +
Preference number: 5 (lower is better)
Translates to: HFCHSMWVFALFAPS*VQVPESSLLIFVHL
Trigger: GAGATGGACAAAAATTAGTAAAGAAGATTCTGGGACCTGCACCCAAGATGGAGCAAAAAGAGCGAAGACCCACATCGAATGACAGAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 90 bp TGGCTCTCTCAGAACATGATAATGAAGAATCAACATGTTCAGCAATaGATGCCAAGGACCCTCTGGAACGCTCTGACTCTGTTACAGATT +
Preference number: 5 (lower is better)
Translates to: WLSQNMIMKNQHVQQ*MPRTLWNALTLLQI
Trigger: AATCTGTAACAGAGTCAGAGCGTTCCAGAGGGTCCTTGGCATCCATTGCTGAACATGTTGATTCTTCATTATCATGTTCTGAGAGAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTAGAGAAGGCTTTGAATaGTTCTCACTTCCTTTTGTT +
Preference number: 5 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSREGFE*FSLPFV
Trigger: AACAAAAGGAAGTGAGAACAATTCAAAGCCTTCTCT...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCCATGACTCTTGTATCTaGAAGACTCAGAGTAACTGT +
Preference number: 5 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCHDSCI*KTQSNC
Trigger: ACAGTTACTCTGAGTCTTCAAGATACAAGAGTCATG...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATGGCATGCTCAGCTCCTaGGTAGAAGACAGAGCAGTC +
Preference number: 5 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDGMLSS*VEDRAV
Trigger: GACTGCTCTGTCTTCTACCAAGGAGCTGAGCATGCC...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCAGCTTGTTTTTCCATTaGTTGGATTTCCGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCSLFFH*LDFRFF
Trigger: GAAGAAGCGGAAATCCAACAAATGGAAAAACAAGCT...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCGGGTGTGGCTTGATTTaGGGTTTTTCGGATACGGAG +
Preference number: 5 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFGCGLI*GFSDTE
Trigger: CTCCGTATCCGAAAAACCCAAAATCAAGCCACACCC...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCAAGTCAGTCTCACCTTaGAACCGAAGAGTACCTGGC +
Preference number: 5 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFKSVSP*NRRVPG
Trigger: GCCAGGTACTCTTCGGTTCAAAGGTGAGACTGACTT...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp GATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGTTAGCACTCAGTATACCATGCTTGTCTTaGCACACAAAATACACAATC +
Preference number: 5 (lower is better)
Translates to: DGVYIRRQKGPGLMLALSIPCLS*HTKYTI
Trigger: GATTGTGTATTTTGTGTGCAAAGACAAGCATGGTAT...ACTGAGTGCTAACATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp TTGCTATGGTGGAGATGGGGTGTATATCAGAAGGCAGAAAGGCCCAGGACTCATGCAAAAATACCATGCTaGTCTTTGCACACAAAATAC +
Preference number: 5 (lower is better)
Translates to: LLWWRWGVYQKAERPRTHAKIPC*SLHTKY
Trigger: GTATTTTGTGTGCAAAGACAAGCATGGTATTTTTGC...ATGAGTCCTGGGCCTTTCTGCCTTCTGATATACACCCCATCTCCACCATAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTACCTATGTCTAGACCTTaGCTGGCACCACCAAGGAAC +
Preference number: 5 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVPMSRP*LAPPRN
Trigger: GTTCCTTGGTGGTGCCAGCAAAGGTCTAGACATAGG...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp GAATACAATAGACATGCTTTGACTCCAGATGACTGGGACTTAAGCTaGAAGGTGTACCGTGGGTTTCCCTATAAGAAACCAAAGGTTCAC +
Preference number: 5 (lower is better)
Translates to: EYNRHALTPDDWDLS*KVYRGFPYKKPKVH
Trigger: GTGAACCTTTGGTTTCTTATAGGGAAACCCACGGTACACCTTTCAGCTTAAGTCCCAGTCATCTGGAGTCAAAGCATGTCTATTGTATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS CCA 90 bp TCCAGTTTAATATCATGTTGCTGCCGCTTTGAAATATCTGATCTTTaGGAATTACAGGCACTAGAGGATGGAGAAGAGTCAGACAGCAGC +
Preference number: 5 (lower is better)
Translates to: SSLISCCCRFEISDL*ELQALEDGEESDSS
Trigger: GCTGCTGTCTGACTCTTCTCCATCCTCTAGTGCCTGTAATTCCCAAAGATCAGATATTTCAAAGCGGCAGCAACATGATATTAAACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS CCA 90 bp TTCCCATGGTCCTTTGCTTTGTGTACCACCTATGTGCCCAAAAAGTaGCAAGAATTTCTCAGCTTCTTTCTGAAACTCTTTGATGGGTTC +
Preference number: 5 (lower is better)
Translates to: FPWSFALCTTYVPKK*QEFLSFFLKLFDGF
Trigger: GAACCCATCAAAGAGTTTCAGAAAGAAGCTGAGAAATTCTTGCCACTTTTTGGGCACATAGGTGGTACACAAAGCAAAGGACCATGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCGGAGTTACTTCTAATTaGTTCTCAATGTGTCTCAGA +
Preference number: 5 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCGVTSN*FSMCLR
Trigger: TCTGAGACACATTGAGAACAAATTAGAAGTAACTCC...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATCCATGGTCCTTTGCTTaGTGTACCACCTATGTGCCC +
Preference number: 5 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDPWSFA*CTTYVP
Trigger: GGGCACATAGGTGGTACACAAAGCAAAGGACCATGG...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCGAGATAGGGGAGAAGTaGGAGTCTTCTGAGATCTTC +
Preference number: 5 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFEIGEK*ESSEIF
Trigger: GAAGATCTCAGAAGACTCCAACTTCTCCCCTATCTC...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCGTGATCCCTCTTCACTaGCTATTCCTTTCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFVIPLH*LFLSAL
Trigger: CAGAGCAGAAAGGAATAGCAAGTGAAGAGGGATCAC...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp TGCAAGAAAGGCAGGATAAACTTTAGTCTTTCGAGTCCTGTCCTGTCCTGCTGCATAGATAAGCAACTTTaGGGAGGTGAATGTTTGCTA +
Preference number: 5 (lower is better)
Translates to: CKKGRINFSLSSPVLSCCIDKQL*GGECLL
Trigger: TAGCAAACATTCACCTCCCAAAAGTTGCTTATCTAT...GCAGCAGGACAGGACAGGACTCGAAAGACTAAAGTTTATCCTGCCTTTCTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCACTCAACCCCTCTCTTaGCATATGCAGATAGTGACC +
Preference number: 5 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFTQPLS*HMQIVT
Trigger: GGTCACTATCTGCATATGCAAAGAGAGGGGTTGAGT...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 90 bp GGGATTTCTCTTTCCGTGGTTTGGAAAATTTGGAAGTTGGAGCACTaGCCCAAGAATCATCTAGACATCTCCCATCTTTCCTACTTATTT +
Preference number: 5 (lower is better)
Translates to: GISLSVVWKIWKLEH*PKNHLDISHLSYLF
Trigger: AAATAAGTAGGAAAGATGGGAGATGTCTAGATGATTCTTGGGCCAGTGCTCCAACTTCCAAATTTTCCAAACCACGGAAAGAGAAATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS CCA 90 bp ATTTGGATTTTTCACACGTCGGAAATAACTAGAATTGATTCTGCATaGCTTCATCCAGACAGGCTGATTCACGTTGGGATCCTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: IWIFHTSEITRIDSA*LHPDRLIHVGILSK
Trigger: TTTGCTGAGGATCCCAACGTGAATCAGCCTGTCTGGATGAAGCCATGCAGAATCAATTCTAGTTATTTCCGACGTGTGAAAAATCCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTTTCTCTTTCCGTGGTTaGGAAAATTTGGAAGTTGGA +
Preference number: 5 (lower is better)
Translates to: LHPSYFTERTYKPHPRASFSFRG*ENLEVG
Trigger: TCCAACTTCCAAATTTTCCAAACCACGGAAAGAGAA...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTTCATCCCAGTTATTTTACAGAGCGTACTTACAAACCACACCCTAGGGCTTCTTTCGTTGTCACCGAGTaGTCAACATTAACAACCATT +
Preference number: 5 (lower is better)
Translates to: LHPSYFTERTYKPHPRASFVVTE*STLTTI
Trigger: AATGGTTGTTAATGTTGACAACTCGGTGACAACGAA...AGAAGCCCTAGGGTGTGGTTTGTAAGTACGCTCTGTAAAATAACTGGGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTATCCAACCAGTCCATCTaGTCTTTCTTCCCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVSNQSI*SFFPFF
Trigger: GAAGAAGGGGAAGAAAGACAAGATGGACTGGTTGGA...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 90 bp ATAATGAAGAATCAACATGTTCAGCAATGGATGCCAAGGACCCTCTaGAACGCTCTGACTCTGTTACAGATTTCCAAGTTTTTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: IMKNQHVQQWMPRTL*NALTLLQISKFLLF
Trigger: AAACAGCAAAAACTTGGAAATCTGTAACAGAGTCAGAGCGTTCCAGAGGGTCCTTGGCATCCATTGCTGAACATGTTGATTCTTCATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS CCA 90 bp CTTCCGTCCAAACTTCATCATTTTCTGCCAATCTGTTTTGTGGTTTaGCTCCTTCTTGAGACTAAGCAGTTTGAGTACTTCGGTTGTTAT +
Preference number: 5 (lower is better)
Translates to: LPSKLHHFLPICFVV*LLLETKQFEYFGCY
Trigger: ATAACAACCGAAGTACTCAAACTGCTTAGTCTCAAGAAGGAGCCAAACCACAAAACAGATTGGCAGAAAATGATGAAGTTTGGACGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATGAGAGTTCCTGGGATTaGGTAAAGGCACCTCTTTTG +
Preference number: 5 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDESSWD*VKAPLL
Trigger: CAAAAGAGGTGCCTTTACCAAATCCCAGGAACTCTC...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTATTCTTGAGAACAGGCTaGTATGTCAGAGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVFLRTG*YVRAGR
Trigger: TCTTCCAGCTCTGACATACAAGCCTGTTCTCAAGAA...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp TGTAAAGGCAAAGGCTGTAATACCAGATATACCACATTGTCCCATGAACTCCAAACAATTTCTGTGAACTaGGAGATAGGGGAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: CKGKGCNTRYTTLSHELQTISVN*EIGEKL
Trigger: CAACTTCTCCCCTATCTCCAAGTTCACAGAAATTGT...TTGGAGTTCATGGGACAATGTGGTATATCTGGTATTACAGCCTTTGCCTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 90 bp ACTCAACCCCTCTCTTTGCATATGCAGATAGTGACCTTTCTGATATaGCTCTCTCAGAACATGATAATGAAGAATCAACATGTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: TQPLSLHMQIVTFLI*LSQNMIMKNQHVQQ
Trigger: TTGCTGAACATGTTGATTCTTCATTATCATGTTCTGAGAGAGCCATATCAGAAAGGTCACTATCTGCATATGCAAAGAGAGGGGTTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACAATTTCATTCGTAAGCTaGATATGGCACTCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTISFVS*IWHSGV
Trigger: GACCCCAGAGTGCCATATCAAGCTTACGAATGAAAT...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTACTATCTGTTTCAGCTTaGGTCCTCAGTTTTCTCATG +
Preference number: 5 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVLSVSA*VLSFLM
Trigger: CATGAGAAAACTGAGGACCAAAGCTGAAACAGATAG...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTGTCTTTGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCCAGGGTGTCTGTAGGAGAGAGTTTTCATTaGAAATTTGGATGTTGGGGA +
Preference number: 5 (lower is better)
Translates to: LSLGFLMCFEAIMSRVSVGESFH*KFGCWG
Trigger: TCCCCAACATCCAAATTTCAAATGAAAACTCTCTCC...TACAGACACCCTGGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACACAAGCTGCTGTTGCTTaGATTCTCCAGAAAACGTGT +
Preference number: 5 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTQAAVA*ILQKTC
Trigger: ACACGTTTTCTGGAGAATCAAAGCAACAGCAGCTTG...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CCTGTAGTCACAGAAGGAAGTCACCTTCCTTATAAACTACTTTTGAGCTCTTTCACCTTAAAAAGCAACTaGGAACACTGGGTGATTGTT +
Preference number: 5 (lower is better)
Translates to: PVVTEGSHLPYKLLLSSFTLKSN*EHWVIV
Trigger: AACAATCACCCAGTGTTCCAAGTTGCTTTTTAAGGT...GAAAGAGCTCAAAAGTAGTTTATAAGGAAGGTGACTTCCTTCTGTGACTACAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTGTCTTTGGGTTTTCTAATGTGTTTTGAAGCCATAATGTCCAGGGTGTCTGTACCATTAGAGGTACGATaGTTTCTTCTGCCTTATTCT +
Preference number: 5 (lower is better)
Translates to: LSLGFLMCFEAIMSRVSVPLEVR*FLLPYS
Trigger: AGAATAAGGCAGAAGAAACAATCGTACCTCTAATGG...TACAGACACCCTGGACATTATGGCTTCAAAACACATTAGAAAACCCAAAGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp CACTTTCGGATCAACATCATGTTCCATGTTGTTAAGAGAAGGCTTTaGATTGTTCTCACTTCCTTTTGTTCTGTTAGGCATTTCATCCTC +
Preference number: 5 (lower is better)
Translates to: HFRINIMFHVVKRRL*IVLTSFCSVRHFIL
Trigger: GAGGATGAAATGCCTAACAGAACAAAAGGAAGTGAGAACAATTCAAAGCCTTCTCTTAACAACATGGAACATGATGTTGATCCGAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATATCTCTTTCATGACGTaGCTGCTGTGCCTTTATGAT +
Preference number: 5 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDISFMT*LLCLYD
Trigger: ATCATAAAGGCACAGCAGCAACGTCATGAAAGAGAT...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp TTCCTAATCCGCTCTTTAAGTTTTTCCAGTTTAATATCATGTTGCTaGCGCTTTGAAATATCTGATCTTTGGGAATTACAGGCACTAGAG +
Preference number: 5 (lower is better)
Translates to: FLIRSLSFSSLISCC*RFEISDLWELQALE
Trigger: CTCTAGTGCCTGTAATTCCCAAAGATCAGATATTTCAAAGCGGCAGCAACATGATATTAAACTGGAAAAACTTAAAGAGCGGATTAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTGAGCCTATGGACTTACAGCAGTAAGTTTTTCCTTTTCTGGCATGATAATGTATGTGCAATGCATCAATaGCTGGTCCATCATTTAAAA +
Preference number: 5 (lower is better)
Translates to: LSLWTYSSKFFLFWHDNVCAMHQ*LVHHLK
Trigger: TTTTAAATGATGGACCAGCAATTGATGCATTGCACA...TACATTATCATGCCAGAAAAGGAAAAACTTACTGCTGTAAGTCCATAGGCTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 90 bp TGTTTCCTAATCCGCTCTTTAAGTTTTTCCAGTTTAATATCATGTTaGTGCCGCTTTGAAATATCTGATCTTTGGGAATTACAGGCACTA +
Preference number: 5 (lower is better)
Translates to: CFLIRSLSFSSLISC*CRFEISDLWELQAL
Trigger: TAGTGCCTGTAATTCCCAAAGATCAGATATTTCAAAGCGGCAGCAACATGATATTAAACTGGAAAAACTTAAAGAGCGGATTAGGAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp ACTAAAAGGTATTACTGCAGATGCAAAGATCGTTTAGAGGAATCAATGCAGACAACATCATGTTCCATGTaGTTAAGAGAAGGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: TKRYYCRCKDRLEESMQTTSCSM*LREGFE
Trigger: TTCAAAGCCTTCTCTTAACAACATGGAACATGATGT...TGTCTGCATTGATTCCTCTAAACGATCTTTGCATCTGCAGTAATACCTTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS-3UTR CAA 90 bp CTTCTTCAGTGTGTGTATAGATTTATTAAAACTGCAGCTTTCCTGTGCGAAGATAAGGTGAGATATTTTTaGAGGAGGAGCAAAAATACC +
Preference number: 5 (lower is better)
Translates to: LLQCVYRFIKTAAFLCEDKVRYF*RRSKNT
Trigger: GGTATTTTTGCTCCTCCTCAAAAAATATCTCACCTT...ATCTTCGCACAGGAAAGCTGCAGTTTTAATAAATCTATACACACACTGAAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 90 bp CTAAGCTGGATTTTCTCATTTCTAGCCTTTTTGACTTGTTGTAGTTaGCTAACTGTGTCTTTCACAAAGACTTGTAGTAAACTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: LSWIFSFLAFLTCCS*LTVSFTKTCSKLSV
Trigger: AACAGACAGTTTACTACAAGTCTTTGTGAAAGACACAGTTAGTCAACTACAACAAGTCAAAAAGGCTAGAAATGAGAAAATCCAGCTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp GAGCGAGTGGACCCAGCAGAGCGAGCTCCCGAGGAGTaGTGGGAGGTAGCATCCACAGAGGCAAGGTCACAG +
Preference number: 6 (lower is better)
Translates to: ERVDPAERAPEE*WEVASTEARSQ
Trigger: CTGTGACCTTGCCTCTGTGGATGCTACCTCCCAGCACTCCTCGGGAGCTCGCTCTGCTGGGTCCACTCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp TCCAGACGCCGCTTCCACTCCAGGAGCTCCTCTGCGTaGTGGCGGCGCTGCATGAGCTTCTGTTCTCGCTTC +
Preference number: 6 (lower is better)
Translates to: SRRRFHSRSSSA*WRRCMSFCSRF
Trigger: GAAGCGAGAACAGAAGCTCATGCAGCGCCGCCAGCACGCAGAGGAGCTCCTGGAGTGGAAGCGGCGTCTGGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS CCA 72 bp CGAGTGGACCCAGCAGAGCGAGCTCCCGAGGAGTGCTaGGAGGTAGCATCCACAGAGGCAAGGTCACAGGCA +
Preference number: 6 (lower is better)
Translates to: RVDPAERAPEEC*EVASTEARSQA
Trigger: TGCCTGTGACCTTGCCTCTGTGGATGCTACCTCCCAGCACTCCTCGGGAGCTCGCTCTGCTGGGTCCACTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp CGATATCGGGGAAGGACTGCGGGTCTCCAAGCCGGGTaGCCCAGGACTAGCTGCCTTGTTGTCCTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: RYRGRTAGLQAG*PRTSCLVVLCF
Trigger: GAAGCAGAGGACAACAAGGCAGCTAGTCCTGGGCCACCCGGCTTGGAGACCCGCAGTCCTTCCCCGATATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp TTCCACTCCAGGAGCTCCTCTGCGTGCTGGCGGCGCTaGATGAGCTTCTGTTCTCGCTTCGTCAGGAACCTG +
Preference number: 6 (lower is better)
Translates to: FHSRSSSACWRR*MSFCSRFVRNL
Trigger: CAGGTTCCTGACGAAGCGAGAACAGAAGCTCATGCAGCGCCGCCAGCACGCAGAGGAGCTCCTGGAGTGGAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000129865.9
CDS TCA 72 bp GCCCCTAACTCTCTCCACGTCGGACAGCTGGCGCACTaGCTCCTCGAGAGCACTCAGGTAACTGAGTTCTGC +
Preference number: 6 (lower is better)
Translates to: APNSLHVGQLAH*LLESTQVTEFC
Trigger: GCAGAACTCAGTTACCTGAGTGCTCTCGAGGAGTCAGTGCGCCAGCTGTCCGACGTGGAGAGAGTTAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp ACTCCAGGAGCTCCTCTGCGTGCTGGCGGCGCTGCATaGGCTTCTGTTCTCGCTTCGTCAGGAACTTCTCGT +
Preference number: 6 (lower is better)
Translates to: TPGAPLRAGGAA*ASVLASSGTSR
Trigger: ACGAGAAGTTCCTGACGAAGCGAGAACAGAAGCTCATGCAGCGCCGCCAGCACGCAGAGGAGCTCCTGGAGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp TTCCACTCCAGGAGCTCCTCTGCGTGCTGGCGGCGCTaGATGAGCTTCTGTTCTCGCTTCGTCAGGAACTTC +
Preference number: 6 (lower is better)
Translates to: FHSRSSSACWRR*MSFCSRFVRNF
Trigger: GAAGTTCCTGACGAAGCGAGAACAGAAGCTCATGCAGCGCCGCCAGCACGCAGAGGAGCTCCTGGAGTGGAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp GGGGCTGTGACTCCGAGGTACTTGTTCAGGGGCCGATaGCTTCTGATTCTGTCCCTCTCCAGCCTCTTGCCT +
Preference number: 6 (lower is better)
Translates to: GAVTPRYLFRGR*LLILSLSSLLP
Trigger: AGGCAAGAGGCTGGAGAGGGACAGAATCAGAAGTCATCGGCCCCTGAACAAGTACCTCGGAGTCACAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp AGGTGTGTTCGAGTTAGTTCTGCCATCTCACAGATCTaGCGCGCTGCATCTGTGGTGAGGCGCGCGGTCTCT +
Preference number: 6 (lower is better)
Translates to: RCVRVSSAISQI*RAASVVRRAVS
Trigger: AGAGACCGCGCGCCTCACCACAGATGCAGCGCGGCAGATCTGTGAGATGGCAGAACTAACTCGAACACACCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp ACTGCGGGTCTCCAAGCCGGGTGGCCCAGGACTAGCTaGCTTGTTGTCCTCTGCTTCATCATCATCAGCAAG +
Preference number: 6 (lower is better)
Translates to: TAGLQAGWPRTS*LVVLCFIIISK
Trigger: CTTGCTGATGATGATGAAGCAGAGGACAACAAGGCAGCTAGTCCTGGGCCACCCGGCTTGGAGACCCGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp CGGGTCTCCAAGCCGGGTGGCCCAGGACTAGCTGCCTaGTTGTCCTCTGCTTCATCATCATCAGCAAGAGAG +
Preference number: 6 (lower is better)
Translates to: RVSKPGGPGLAA*LSSASSSSARE
Trigger: CTCTCTTGCTGATGATGATGAAGCAGAGGACAACAAGGCAGCTAGTCCTGGGCCACCCGGCTTGGAGACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp GTGCTCTCAGCATCCAGAGTCTGCTCAGAGTCTCCAACAGCAAGTTaGCTGCCAGTCCCAAGCTTCCTGCTTGGATGGGAGCCGCGTTCT +
Preference number: 6 (lower is better)
Translates to: VLSASRVCSESPTAS*LPVPSFLLGWEPRS
Trigger: AGAACGCGGCTCCCATCCAAGCAGGAAGCTTGGGACTGGCAGCAAACTTGCTGTTGGAGACTCTGAGCAGACTCTGGATGCTGAGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp GGACTGCGGGTCTCCAAGCCGGGTGGCCCAGGACTAGCTGCCTTGTaGTCCTCTGCTTCATCATCATCAGCAAGAGAGCCCAATTTCTTC +
Preference number: 6 (lower is better)
Translates to: GLRVSKPGGPGLAAL*SSASSSSAREPNFF
Trigger: GAAGAAATTGGGCTCTCTTGCTGATGATGATGAAGCAGAGGACAACAAGGCAGCTAGTCCTGGGCCACCCGGCTTGGAGACCCGCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp GAAGGACTGCGGGTCTCCAAGCCGGGTGGCCCAGGACTAGCTGCCTaGTTGTCCTCTGCTTCATCATCATCAGCAAGAGAGCCCAATTTC +
Preference number: 6 (lower is better)
Translates to: EGLRVSKPGGPGLAA*LSSASSSSAREPNF
Trigger: GAAATTGGGCTCTCTTGCTGATGATGATGAAGCAGAGGACAACAAGGCAGCTAGTCCTGGGCCACCCGGCTTGGAGACCCGCAGTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp CCCGGTGGCTCTGCTTCTGGAGCTCCTTGTGAGCTGTaGCCTATCTCTGTGAGACTGAGAGTCCTTCCTGAG +
Preference number: 6 (lower is better)
Translates to: PGGSASGAPCEL*PISVRLRVLPE
Trigger: CTCAGGAAGGACTCTCAGTCTCACAGAGATAGGTCACAGCTCACAAGGAGCTCCAGAAGCAGAGCCACCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp CTGAGCTCCAGCAGCCTTTCCGAGTGGACGCCACTATaGACAGAGAGGCTTTTCTCACCGAGACACTCGCTG +
Preference number: 6 (lower is better)
Translates to: LSSSSLSEWTPL*TERLFSPRHSL
Trigger: CAGCGAGTGTCTCGGTGAGAAAAGCCTCTCTGTTCATAGTGGCGTCCACTCGGAAAGGCTGCTGGAGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp ACTCTCTCTGCATCCTTGCTCAGGGATGCCTCCTGCTaGCTGGATGTCTGGACTGCGGTCATCTGTACTGTG +
Preference number: 6 (lower is better)
Translates to: TLSASLLRDASC*LDVWTAVICTV
Trigger: CACAGTACAGATGACCGCAGTCCAGACATCCAGTCAGCAGGAGGCATCCCTGAGCAAGGATGCAGAGAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp TATGAACAGAGAGGCTTTTCTCACCGAGACACTCGCTaGTCTCCTCATCGCTTCCAGACCCGGTGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: YEQRGFSHRDTR*SPHRFQTRWLC
Trigger: GCAGAGCCACCGGGTCTGGAAGCGATGAGGAGATCAGCGAGTGTCTCGGTGAGAAAAGCCTCTCTGTTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp TGCGCTCCTTACTCTTCATTAGCTCTGTGGGTGACCTaGGCTCCAGCAGCCTTTCCGAGTGGACGCCACTAT +
Preference number: 6 (lower is better)
Translates to: CAPYSSLALWVT*APAAFPSGRHY
Trigger: ATAGTGGCGTCCACTCGGAAAGGCTGCTGGAGCTCAGGTCACCCACAGAGCTAATGAAGAGTAAGGAGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp CTCCAACAGCAAGTTTGCTGCCAGTCCCAAGCTTCCTaGTTGGATGGGAGCCGCGTTCTGAGTCTGACTGTA +
Preference number: 6 (lower is better)
Translates to: LQQQVCCQSQAS*LDGSRVLSLTV
Trigger: TACAGTCAGACTCAGAACGCGGCTCCCATCCAAGCAGGAAGCTTGGGACTGGCAGCAAACTTGCTGTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp AGCCACTCACAGAGTGCCCAGACAGGTCTTCCAGTGTaGTCTCAGCATCCAGAGTCTGCTCAGAGTCTCCAA +
Preference number: 6 (lower is better)
Translates to: SHSQSAQTGLPV*SQHPESAQSLQ
Trigger: TTGGAGACTCTGAGCAGACTCTGGATGCTGAGAGCACACTGGAAGACCTGTCTGGGCACTCTGTGAGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp CACACACAACTCATCCTCATCATAGTTCACCCACTGTaGCTCCTCCTCGTGCAGCTCCTGGACCAGGATGTG +
Preference number: 6 (lower is better)
Translates to: HTQLILIIVHPL*LLLVQLLDQDV
Trigger: CACATCCTGGTCCAGGAGCTGCACGAGGAGGAGGCACAGTGGGTGAACTATGATGAGGATGAGTTGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp AGTAACTGTCACGGGAAGGGGAGAACTTCTGCCGCTTaGAGTCCACAGCGCCTTCTTTACTCTGGGAGTGTG +
Preference number: 6 (lower is better)
Translates to: SNCHGKGRTSAA*SPQRLLYSGSV
Trigger: CACACTCCCAGAGTAAAGAAGGCGCTGTGGACTCCAAGCGGCAGAAGTTCTCCCCTTCCCGTGACAGTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp CTCACCATGGAATGGCTTCTCATTCTCCTTACTGGGTaGAACGGAAGGGCTGTCCTGTCGGCTGCTACCACT +
Preference number: 6 (lower is better)
Translates to: LTMEWLLILLTG*NGRAVLSAATT
Trigger: AGTGGTAGCAGCCGACAGGACAGCCCTTCCGTTCCACCCAGTAAGGAGAATGAGAAGCCATTCCATGGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp AAGGCCTTTTCTCGAAGACGCAGAAGTGAGGACTGGTaGGCTGCGCGCACTTCCTCTTCCTTCATGTACTGC +
Preference number: 6 (lower is better)
Translates to: KAFSRRRRSEDW*AARTSSSFMYC
Trigger: GCAGTACATGAAGGAAGAGGAAGTGCGCGCAGCTCACCAGTCCTCACTTCTGCGTCTTCGAGAAAAGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp GCTGTGACCTATCTCTGTGAGACTGAGAGTCCTTCCTaGGCGACGATGGTGAGGACCCCTCAGAGTCATCTT +
Preference number: 6 (lower is better)
Translates to: AVTYLCETESPS*ATMVRTPQSHL
Trigger: AAGATGACTCTGAGGGGTCCTCACCATCGTCGCTCAGGAAGGACTCTCAGTCTCACAGAGATAGGTCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp GCCGGGTGGCCCAGGACTAGCTGCCTTGTTGTCCTCTaGTTCATCATCATCAGCAAGAGAGCCCAATTTCTT +
Preference number: 6 (lower is better)
Translates to: AGWPRTSCLVVL*FIIISKRAQFL
Trigger: AAGAAATTGGGCTCTCTTGCTGATGATGATGAAGCAGAGGACAACAAGGCAGCTAGTCCTGGGCCACCCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp GCAAGTTTGCTGCCAGTCCCAAGCTTCCTGCTTGGATaGGAGCCGCGTTCTGAGTCTGACTGTACTTTTTCC +
Preference number: 6 (lower is better)
Translates to: ASLLPVPSFLLG*EPRSESDCTFS
Trigger: GGAAAAAGTACAGTCAGACTCAGAACGCGGCTCCCATCCAAGCAGGAAGCTTGGGACTGGCAGCAAACTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp CAACAGCAAGTTTGCTGCCAGTCCCAAGCTTCCTGCTaGGATGGGAGCCGCGTTCTGAGTCTGACTGTACTT +
Preference number: 6 (lower is better)
Translates to: QQQVCCQSQASC*DGSRVLSLTVL
Trigger: AAGTACAGTCAGACTCAGAACGCGGCTCCCATCCAAGCAGGAAGCTTGGGACTGGCAGCAAACTTGCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp GTCAGGAACTTCTCGTCCATGCGGCTTCTCATGCTCTaGAGCTTCTGCATGATGCTGCTGGTCTCACTGCTG +
Preference number: 6 (lower is better)
Translates to: VRNFSSMRLLML*SFCMMLLVSLL
Trigger: CAGCAGTGAGACCAGCAGCATCATGCAGAAGCTCAAGAGCATGAGAAGCCGCATGGACGAGAAGTTCCTGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp GTTCTTCTGCTCCGTAGCCTCCTTCTGAGCCTTCTTCTCTTCGTGTaGCCTCCTCCTCCTCTCCTCCTGCTGTCTAACAATGTACTGTCG +
Preference number: 6 (lower is better)
Translates to: VLLLRSLLLSLLLFV*PPPPLLLLSNNVLS
Trigger: CGACAGTACATTGTTAGACAGCAGGAGGAGAGGAGGAGGAGGCAACACGAAGAGAAGAAGGCTCAGAAGGAGGCTACGGAGCAGAAGAAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp CATCAAGTCTCTTCTTGCAAGAGGTTGTGGAGGCTCTaGCAGGGACAGGTCACTACTGGAAGACGCACTTGG +
Preference number: 6 (lower is better)
Translates to: HQVSSCKRLWRL*QGQVTTGRRTW
Trigger: CCAAGTGCGTCTTCCAGTAGTGACCTGTCCCTGTCAGAGCCTCCACAACCTCTTGCAAGAAGAGACTTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp AGGTCACAGGCAAACTGTCTGCTCAGATGCTCCTCCTaGACGCCCAAGCTGCTACCATCAACTTGGGATTCA +
Preference number: 6 (lower is better)
Translates to: RSQANCLLRCSS*TPKLLPSTWDS
Trigger: TGAATCCCAAGTTGATGGTAGCAGCTTGGGCGTTCAGGAGGAGCATCTGAGCAGACAGTTTGCCTGTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp CCCAATTTCTTCTCCCCTGCAGACTTGAGCTTCTCCTaGAGTTTTATGGTGGTCTGGCGGATCCTCTCGATC +
Preference number: 6 (lower is better)
Translates to: PNFFSPADLSFS*SFMVVWRILSI
Trigger: GATCGAGAGGATCCGCCAGACCACCATAAAACTGCAGGAGAAGCTCAAGTCTGCAGGGGAGAAGAAATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp CAGAGTCTCCAACAGCAAGTTTGCTGCCAGTCCCAAGCTTCCTGCTaGGATGGGAGCCGCGTTCTGAGTCTGACTGTACTTTTTCCTCAT +
Preference number: 6 (lower is better)
Translates to: QSLQQQVCCQSQASC*DGSRVLSLTVLFPH
Trigger: ATGAGGAAAAAGTACAGTCAGACTCAGAACGCGGCTCCCATCCAAGCAGGAAGCTTGGGACTGGCAGCAAACTTGCTGTTGGAGACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp TCTCGCTTCGTCAGGAACTTCTCGTCCATGCGGCTTCTCATGCTCTaGAGCTTCTGCATGATGCTGCTGGTCTCACTGCTGGAAATCGAT +
Preference number: 6 (lower is better)
Translates to: SRFVRNFSSMRLLML*SFCMMLLVSLLEID
Trigger: ATCGATTTCCAGCAGTGAGACCAGCAGCATCATGCAGAAGCTCAAGAGCATGAGAAGCCGCATGGACGAGAAGTTCCTGACGAAGCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp CCTGTCGGCTGCTACCACTACTCCGGTAATCATGACTCTTGTATCTaGAAGACTCAGAGTAACTGTCACGGGAAGGGGAGAACTTCTGCC +
Preference number: 6 (lower is better)
Translates to: PVGCYHYSGNHDSCI*KTQSNCHGKGRTSA
Trigger: GGCAGAAGTTCTCCCCTTCCCGTGACAGTTACTCTGAGTCTTCAAGATACAAGAGTCATGATTACCGGAGTAGTGGTAGCAGCCGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp TCCTTCTCTGCAAGCTGCTGTTGCTTTGATTCTCCAGAAAACGTGTaGTCTGAAGTAGCAGCACCCGCAGCAGCAGGAACACTCTCTGTG +
Preference number: 6 (lower is better)
Translates to: SFSASCCCFDSPENV*SEVAAPAAAGTLSV
Trigger: CACAGAGAGTGTTCCTGCTGCTGCGGGTGCTGCTACTTCAGACAACACGTTTTCTGGAGAATCAAAGCAACAGCAGCTTGCAGAGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp TCTGTGAGACTGAGAGTCCTTCCTGAGCGACGATGGTaGGGACCCCTCAGAGTCATCTTTACTAATCTCGTC +
Preference number: 6 (lower is better)
Translates to: SVRLRVLPERRW*GPLRVIFTNLV
Trigger: GACGAGATTAGTAAAGATGACTCTGAGGGGTCCTCACCATCGTCGCTCAGGAAGGACTCTCAGTCTCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp AAGTCAGTCTCACCTTTGAACCGAAGAGTACCTGGCTaGACACTGCCGATCAACACCCTATCCCCAATGTGG +
Preference number: 6 (lower is better)
Translates to: KSVSPLNRRVPG*TLPINTLSPMW
Trigger: CCACATTGGGGATAGGGTGTTGATCGGCAGTGTTCAGCCAGGTACTCTTCGGTTCAAAGGTGAGACTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp TTCTCGTCCATGCGGCTTCTCATGCTCTTGAGCTTCTaGATGATGCTGCTGGTCTCACTGCTGGAAATCGAT +
Preference number: 6 (lower is better)
Translates to: FSSMRLLMLLSF*MMLLVSLLEID
Trigger: ATCGATTTCCAGCAGTGAGACCAGCAGCATCATGCAGAAGCTCAAGAGCATGAGAAGCCGCATGGACGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp GGTAGCCCTGAGAGGACTACGGGATTTCTCTTTCCGTaGTTTGGAAAATTTGGAAGTTGGAGCACTGGCCCA +
Preference number: 6 (lower is better)
Translates to: GSPERTTGFLFP*FGKFGSWSTGP
Trigger: TGGGCCAGTGCTCCAACTTCCAAATTTTCCAAACCACGGAAAGAGAAATCCCGTAGTCCTCTCAGGGCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS CCA 72 bp GTATGGGGAACTGCCAATAATGTCTCACATGGCTTCTaGGGTGCTCGCTTAGGTTCTGCCATTAGAGGTACG +
Preference number: 6 (lower is better)
Translates to: VWGTANNVSHGF*GARLGSAIRGT
Trigger: CGTACCTCTAATGGCAGAACCTAAGCGAGCACCCCAGAAGCCATGTGAGACATTATTGGCAGTTCCCCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp GCCTCCTGCCACACTTTTCCATCAGGAGTGCGAATCTaGGTCTCTGACGGGTTGAAACCTTTGTATGCTGGA +
Preference number: 6 (lower is better)
Translates to: ASCHTFPSGVRI*VSDGLKPLYAG
Trigger: TCCAGCATACAAAGGTTTCAACCCGTCAGAGACCAAGATTCGCACTCCTGATGGAAAAGTGTGGCAGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS CAA 72 bp CGCCCAAGCTGCTACCATCAACTTGGGATTCAAGAGTaGACTTCCTTTCTGTCAGTGTCCCACTTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: RPSCYHQLGIQE*TSFLSVSHFLE
Trigger: CTCCAGGAAGTGGGACACTGACAGAAAGGAAGTCAACTCTTGAATCCCAAGTTGATGGTAGCAGCTTGGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp GCAAGCTGCTGTTGCTTTGATTCTCCAGAAAACGTGTaGTCTGAAGTAGCAGCACCCGCAGCAGCAGGAACA +
Preference number: 6 (lower is better)
Translates to: ASCCCFDSPENV*SEVAAPAAAGT
Trigger: TGTTCCTGCTGCTGCGGGTGCTGCTACTTCAGACAACACGTTTTCTGGAGAATCAAAGCAACAGCAGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp AGTGCTAAGTCTCGGTACAGCTCTCTACTCATGCTTTaGAACTCCGCCTCCTGCCACACTTTTCCATCAGGA +
Preference number: 6 (lower is better)
Translates to: SAKSRYSSLLML*NSASCHTFPSG
Trigger: TCCTGATGGAAAAGTGTGGCAGGAGGCGGAGTTTCAAAGCATGAGTAGAGAGCTGTACCGAGACTTAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS TCA 72 bp GAGAGGAGACAAAATCATCTTCATAGGAAACGCTGCTaGGTGGGGTTGCGGTGGCATTCAAAGGCCGTGATA +
Preference number: 6 (lower is better)
Translates to: ERRQNHLHRKRC*VGLRWHSKAVI
Trigger: TATCACGGCCTTTGAATGCCACCGCAACCCCACTCAGCAGCGTTTCCTATGAAGATGATTTTGTCTCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp GCCCAAGCTGCTACCATCAACTTGGGATTCAAGAGTTaGCTTCCTTTCTGTCAGTGTCCCACTTCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: AQAATINLGFKS*LPFCQCPTSWR
Trigger: TCTCCAGGAAGTGGGACACTGACAGAAAGGAAGTCAACTCTTGAATCCCAAGTTGATGGTAGCAGCTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp GGAATCATCTGCGGCTGTCTGCAACTGTTCATCAACTaGGCTCTCCATCTTCTCACCATGGAATGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: GIICGCLQLFIN*ALHLLTMEWLL
Trigger: GAGAAGCCATTCCATGGTGAGAAGATGGAGAGCTCAGTTGATGAACAGTTGCAGACAGCCGCAGATGATTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp GTTGAAACCTTTGTATGCTGGAGCAGGTGGTGCTGTTaGCACTTTCCTGACTTTCGTTGTCACCGAGTTGTC +
Preference number: 6 (lower is better)
Translates to: VETFVCWSRWCC*HFPDFRCHRVV
Trigger: GACAACTCGGTGACAACGAAAGTCAGGAAAGTGGCAACAGCACCACCTGCTCCAGCATACAAAGGTTTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS GCA 72 bp AAGGCTGCCTACACCAGGAAGCTCATCGTCAAAAGCTaGATGAGACACACAGGTTCCCAGCATCTTCTGAAT +
Preference number: 6 (lower is better)
Translates to: KAAYTRKLIVKS*MRHTGSQHLLN
Trigger: ATTCAGAAGATGCTGGGAACCTGTGTGTCTCATGCAGCTTTTGACGATGAGCTTCCTGGTGTAGGCAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp AGCAAAGTCAGTCTCACCTTTGAACCGAAGAGTACCTaGCTGAACACTGCCGATCAACACCCTATCCCCAAT +
Preference number: 6 (lower is better)
Translates to: SKVSLTFEPKST*LNTADQHPIPN
Trigger: ATTGGGGATAGGGTGTTGATCGGCAGTGTTCAGCCAGGTACTCTTCGGTTCAAAGGTGAGACTGACTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp GCCCTGAGAGGACTACGGGATTTCTCTTTCCGTGGTTaGGAAAATTTGGAAGTTGGAGCACTGGCCCAAGAA +
Preference number: 6 (lower is better)
Translates to: ALRGLRDFSFRG*ENLEVGALAQE
Trigger: TTCTTGGGCCAGTGCTCCAACTTCCAAATTTTCCAAACCACGGAAAGAGAAATCCCGTAGTCCTCTCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS CAA 90 bp AGGGTGGTAGCCCTGAGAGGACTACGGGATTTCTCTTTCCGTGGTTaGGAAAATTTGGAAGTTGGAGCACTGGCCCAAGAATCATCTAGA +
Preference number: 6 (lower is better)
Translates to: RVVALRGLRDFSFRG*ENLEVGALAQESSR
Trigger: TCTAGATGATTCTTGGGCCAGTGCTCCAACTTCCAAATTTTCCAAACCACGGAAAGAGAAATCCCGTAGTCCTCTCAGGGCTACCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS TCA 72 bp TACCCAGGTCTGGCCTGTATGTCCTGTGTAACATGCTaGCGGGCTGGTTCTTCAAGCAAAGTCTTTTCTAGT +
Preference number: 6 (lower is better)
Translates to: YPGLACMSCVTC*RAGSSSKVFSS
Trigger: ACTAGAAAAGACTTTGCTTGAAGAACCAGCCCGTCAGCATGTTACACAGGACATACAGGCCAGACCTGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp CTCCATGGTGAACTTAGAAAAGCTATCCTGTCCTCCTaGGAATGGCATGCTCAGCTCCTTGGTAGAAGACAG +
Preference number: 6 (lower is better)
Translates to: LHGELRKAILSS*EWHAQLLGRRQ
Trigger: CTGTCTTCTACCAAGGAGCTGAGCATGCCATTCTCAGGAGGACAGGATAGCTTTTCTAAGTTCACCATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp ACTGAAGTGCTAAGTCTCGGTACAGCTCTCTACTCATaGTTTGAAACTCCGCCTCCTGCCACACTTTTCCAT +
Preference number: 6 (lower is better)
Translates to: TEVLSLGTALYS*FETPPPATLFH
Trigger: ATGGAAAAGTGTGGCAGGAGGCGGAGTTTCAAAGCATGAGTAGAGAGCTGTACCGAGACTTAGCACTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS GCA 72 bp CTCACTCTCAATCCTACTGGACAGAGAGGCCGCTGTTaGTTTCAGGGCTTCAATACGATCCAGTTTAGTCTT +
Preference number: 6 (lower is better)
Translates to: LTLNPTGQRGRC*FQGFNTIQFSL
Trigger: AAGACTAAACTGGATCGTATTGAAGCCCTGAAAGCAACAGCGGCCTCTCTGTCCAGTAGGATTGAGAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp CTGACCCAACTCTTTCCATTTCCAAAGCTCCTCTGCTaGATTATGGACAAGGCTTTCTACTTCCTCTGCCGT +
Preference number: 6 (lower is better)
Translates to: LTQLFPFPKLLC*IMDKAFYFLCR
Trigger: ACGGCAGAGGAAGTAGAAAGCCTTGTCCATAATGCAGCAGAGGAGCTTTGGAAATGGAAAGAGTTGGGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp CAAAAACCGCCTGTTTGTAGACTCTTCTACTTGTGCTaGCTATGTCTAGACCTTTGCTGGCACCACCAAGGA +
Preference number: 6 (lower is better)
Translates to: QKPPVCRLFYLC*LCLDLCWHHQG
Trigger: TCCTTGGTGGTGCCAGCAAAGGTCTAGACATAGGCAGCACAAGTAGAAGAGTCTACAAACAGGCGGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp ACTGTCGTACCTCATCTGTGTCATAGTGGCGCTTCTTaGAAATCACAGGCGGATCCTCGTTCGCTGTTATTT +
Preference number: 6 (lower is better)
Translates to: TVVPHLCHSGAS*KSQADPRSLLF
Trigger: AAATAACAGCGAACGAGGATCCGCCTGTGATTTCCAAGAAGCGCCACTATGACACAGATGAGGTACGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp TTGTGCAAAATTCCTACATGCTCAAGATGCAGGAGATaGGAGAGTAAATTCTCAGTCGTTCCAGCGAGGGGC +
Preference number: 6 (lower is better)
Translates to: LCKIPTCSRCRR*ESKFSVVPARG
Trigger: GCCCCTCGCTGGAACGACTGAGAATTTACTCTCCCATCTCCTGCATCTTGAGCATGTAGGAATTTTGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp TGTTTCAGCTTTGGTCCTCAGTTTTCTCATGAAGTCTaGAAAATGCTGCCGCTGGTGGTCGTACAGTGTTGC +
Preference number: 6 (lower is better)
Translates to: CFSFGPQFSHEV*KMLPLVVVQCC
Trigger: GCAACACTGTACGACCACCAGCGGCAGCATTTTCCAGACTTCATGAGAAAACTGAGGACCAAAGCTGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp GCATTATGGACAAGGCTTTCTACTTCCTCTGCCGTATaGGGAACTGCCAATAATGTCTCACATGGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: ALWTRLSTSSAV*GTANNVSHGFW
Trigger: CCAGAAGCCATGTGAGACATTATTGGCAGTTCCCCATACGGCAGAGGAAGTAGAAAGCCTTGTCCATAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp GAGCTTCGTGGAAGCTGTTTATGTGAAACATCCAATTaGGGGTCCGATTCTGCTCTTCCAATATGGCCCCCA +
Preference number: 6 (lower is better)
Translates to: ELRGSCLCETSN*GSDSALPIWPP
Trigger: TGGGGGCCATATTGGAAGAGCAGAATCGGACCCCAAATTGGATGTTTCACATAAACAGCTTCCACGAAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp TTTGTCCCAGGCAGCCAAAGCTTGTTTTTCCATTTGTaGGATTTCCGCTTCTTCTGCATCCAGACGCCGCTT +
Preference number: 6 (lower is better)
Translates to: FVPGSQSLFFHL*DFRFFCIQTPL
Trigger: AAGCGGCGTCTGGATGCAGAAGAAGCGGAAATCCAACAAATGGAAAAACAAGCTTTGGCTGCCTGGGACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS CAA 72 bp TCGGAGAGTAAGAAGGCATTGGTGATCCCTCTTCACTaGCTATTCCTTTCTGCTCTGTTCTCTGGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: SESKKALVIPLH*LFLSALFSGSP
Trigger: AGGAGAGCCAGAGAACAGAGCAGAAAGGAATAGCAAGTGAAGAGGGATCACCAATGCCTTCTTACTCTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS CAA 90 bp GAACGTGCTGAGCTTCGTGGAAGCTGTTTATGTGAAACATCCAATTaGGGGTCCGATTCTGCTCTTCCAATATGGCCCCCAAATTTAGCC +
Preference number: 6 (lower is better)
Translates to: ERAELRGSCLCETSN*GSDSALPIWPPNLA
Trigger: GGCTAAATTTGGGGGCCATATTGGAAGAGCAGAATCGGACCCCAAATTGGATGTTTCACATAAACAGCTTCCACGAAGCTCAGCACGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp TATGCTGGAACAAAGAGACCTTTTGGCTCTTTCTTGAGAACAGGCTaGTATGTCAGAGCTGGAAGAATCTGTCTGCCTCCTGCACAACTG +
Preference number: 6 (lower is better)
Translates to: YAGTKRPFGSFLRTG*YVRAGRICLPPAQL
Trigger: CAGTTGTGCAGGAGGCAGACAGATTCTTCCAGCTCTGACATACAAGCCTGTTCTCAAGAAAGAGCCAAAAGGTCTCTTTGTTCCAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp AGGCTTGCAAATGTTCTATCCGGCTGTCCAACTCAACCCCTCTCTTaGCATATGCAGATAGTGACCTTTCTGATATGGCTCTCTCAGAAC +
Preference number: 6 (lower is better)
Translates to: RLANVLSGCPTQPLS*HMQIVTFLIWLSQN
Trigger: GTTCTGAGAGAGCCATATCAGAAAGGTCACTATCTGCATATGCAAAGAGAGGGGTTGAGTTGGACAGCCGGATAGAACATTTGCAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS TCA 72 bp TCCTATCTGTTTCAGCTTTGGTCCTCAGTTTTCTCATaGAGTCTGGAAAATGCTGCCGCTGGTGGTCGTACA +
Preference number: 6 (lower is better)
Translates to: SYLFQLWSSVFS*SLENAAAGGRT
Trigger: TGTACGACCACCAGCGGCAGCATTTTCCAGACTTCATGAGAAAACTGAGGACCAAAGCTGAAACAGATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp TGTGCTTTTCTAGATGACAGATCTGGAGATGAGGCTTaGAAATGTTCTATCCGGCTGTCCAACTCAACCCCT +
Preference number: 6 (lower is better)
Translates to: CAFLDDRSGDEA*KCSIRLSNSTP
Trigger: AGGGGTTGAGTTGGACAGCCGGATAGAACATTTGCAAGCCTCATCTCCAGATCTGTCATCTAGAAAAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS CCA 72 bp AGCTTCGTGGAAGCTGTTTATGTGAAACATCCAATTTaGGGTCCGATTCTGCTCTTCCAATATGGCCCCCAA +
Preference number: 6 (lower is better)
Translates to: SFVEAVYVKHPI*GPILLFQYGPQ
Trigger: TTGGGGGCCATATTGGAAGAGCAGAATCGGACCCCAAATTGGATGTTTCACATAAACAGCTTCCACGAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp TGCTACCACTACTCCGGTAATCATGACTCTTGTATCTaGAAGACTCAGAGTAACTGTCACGGGAAGGGGAGA +
Preference number: 6 (lower is better)
Translates to: CYHYSGNHDSCI*KTQSNCHGKGR
Trigger: TCTCCCCTTCCCGTGACAGTTACTCTGAGTCTTCAAGATACAAGAGTCATGATTACCGGAGTAGTGGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp GCTGCACATTTGCAGAGTCTGAGGGAAGTTCTTTACTaGACAGGGTTTCAGAGGCCAGGTCTAGTTTCAGTA +
Preference number: 6 (lower is better)
Translates to: AAHLQSLREVLY*TGFQRPGLVSV
Trigger: TACTGAAACTAGACCTGGCCTCTGAAACCCTGTCAAGTAAAGAACTTCCCTCAGACTCTGCAAATGTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp CGCTGTTGCTTTCAGGGCTTCAATACGATCCAGTTTAGTCTTATATaGGCTGGTACTAGGTTTCAACAAGGCATCTGGATGAGGAGCTTG +
Preference number: 6 (lower is better)
Translates to: RCCFQGFNTIQFSLI*AGTRFQQGIWMRSL
Trigger: CAAGCTCCTCATCCAGATGCCTTGTTGAAACCTAGTACCAGCCAATATAAGACTAAACTGGATCGTATTGAAGCCCTGAAAGCAACAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp GATGAGGAGCTTGTGAGGTCAGATATGGTTGAGGTGTaGAAGTTAACGGTCCTGAAGCCGTATTATGACTCT +
Preference number: 6 (lower is better)
Translates to: DEELVRSDMVEV*KLTVLKPYYDS
Trigger: AGAGTCATAATACGGCTTCAGGACCGTTAACTTTCACACCTCAACCATATCTGACCTCACAAGCTCCTCATC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp CTTGGAGTCCACAGCGCCTTCTTTACTCTGGGAGTGTaGAGCAGAATGACTTATCCTATCTGTTTCAGCTTT +
Preference number: 6 (lower is better)
Translates to: LGVHSAFFTLGV*SRMTYPICFSF
Trigger: AAAGCTGAAACAGATAGGATAAGTCATTCTGCTTCACACTCCCAGAGTAAAGAAGGCGCTGTGGACTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp TTATCATCCTCTCCTTTGTCTCGTAGATGCTTTTTCTaGTGCTCTAGCCAGGCTAGTTCGGCCTTTGTCTTC +
Preference number: 6 (lower is better)
Translates to: LSSSPLSRRCFF*CSSQASSAFVF
Trigger: GAAGACAAAGGCCGAACTAGCCTGGCTAGAGCATCAGAAAAAGCATCTACGAGACAAAGGAGAGGATGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp ACTTTCACTGTTCCTCGGAGAGTAAGAAGGCATTGGTaGTCCCTCTTCACTTGCTATTCCTTTCTGCTCTGT +
Preference number: 6 (lower is better)
Translates to: TFTVPRRVRRHW*SLFTCYSFLLC
Trigger: ACAGAGCAGAAAGGAATAGCAAGTGAAGAGGGATCACCAATGCCTTCTTACTCTCCGAGGAACAGTGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS TCA 72 bp TTCAGCAATGGATGCCAAGGACCCTCTGGAACGCTCTaGCTCTGTTACAGATTTCCAAGTTTTTGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: FSNGCQGPSGTL*LCYRFPSFCCF
Trigger: GAAACAGCAAAAACTTGGAAATCTGTAACAGAGTCAGAGCGTTCCAGAGGGTCCTTGGCATCCATTGCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS GCA 72 bp ATACTGTCACTTCGTAAGGAATCATCTGCGGCTGTCTaGAACTGTTCATCAACTGAGCTCTCCATCTTCTCA +
Preference number: 6 (lower is better)
Translates to: ILSLRKESSAAV*NCSSTELSIFS
Trigger: TGAGAAGATGGAGAGCTCAGTTGATGAACAGTTGCAGACAGCCGCAGATGATTCCTTACGAAGTGACAGTAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp GTCATCTGTACTGTGATTGGACTGATCCTCTTTCAGTaGTTCCTCTTTTTCATGAGACGTTTCTGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: VICTVIGLILFQ*FLFFMRRFCGW
Trigger: CCAGCCACAGAAACGTCTCATGAAAAAGAGGAAGCACTGAAAGAGGATCAGTCCAATCACAGTACAGATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp CTTTCCGTGGTTTGGAAAATTTGGAAGTTGGAGCACTaGCCCAAGAATCATCTAGACATCTCCCATCTTTCC +
Preference number: 6 (lower is better)
Translates to: LSVVWKIWKLEH*PKNHLDISHLS
Trigger: GGAAAGATGGGAGATGTCTAGATGATTCTTGGGCCAGTGCTCCAACTTCCAAATTTTCCAAACCACGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS CCA 72 bp GACTACGGGATTTCTCTTTCCGTGGTTTGGAAAATTTaGAAGTTGGAGCACTGGCCCAAGAATCATCTAGAC +
Preference number: 6 (lower is better)
Translates to: DYGISLSVVWKI*KLEHWPKNHLD
Trigger: GTCTAGATGATTCTTGGGCCAGTGCTCCAACTTCCAAATTTTCCAAACCACGGAAAGAGAAATCCCGTAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS CCA 72 bp ACATCCAATTTGGGGTCCGATTCTGCTCTTCCAATATaGCCCCCAAATTTAGCCACTCTTTCTCTTCCACTT +
Preference number: 6 (lower is better)
Translates to: TSNLGSDSALPI*PPNLATLSLPL
Trigger: AAGTGGAAGAGAAAGAGTGGCTAAATTTGGGGGCCATATTGGAAGAGCAGAATCGGACCCCAAATTGGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp CAGAACATGATAATGAAGAATCAACATGTTCAGCAATaGATGCCAAGGACCCTCTGGAACGCTCTGACTCTG +
Preference number: 6 (lower is better)
Translates to: QNMIMKNQHVQQ*MPRTLWNALTL
Trigger: CAGAGTCAGAGCGTTCCAGAGGGTCCTTGGCATCCATTGCTGAACATGTTGATTCTTCATTATCATGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS CCA 72 bp ACTGGATGTCTGGACTGCGGTCATCTGTACTGTGATTaGACTGATCCTCTTTCAGTGCTTCCTCTTTTTCAT +
Preference number: 6 (lower is better)
Translates to: TGCLDCGHLYCD*TDPLSVLPLFH
Trigger: ATGAAAAAGAGGAAGCACTGAAAGAGGATCAGTCCAATCACAGTACAGATGACCGCAGTCCAGACATCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp AATGTTCTATCCGGCTGTCCAACTCAACCCCTCTCTTaGCATATGCAGATAGTGACCTTTCTGATATGGCTC +
Preference number: 6 (lower is better)
Translates to: NVLSGCPTQPLS*HMQIVTFLIWL
Trigger: GAGCCATATCAGAAAGGTCACTATCTGCATATGCAAAGAGAGGGGTTGAGTTGGACAGCCGGATAGAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS CAA 90 bp CCACTTCTGTCATTCGATGTGGGTCTTCGCTCTTTTTGCTCCATCTaGGGTGCAGGTCCCAGAATCTTCTTTACTAATTTTTGTCCATCT +
Preference number: 6 (lower is better)
Translates to: PLLSFDVGLRSFCSI*GAGPRIFFTNFCPS
Trigger: AGATGGACAAAAATTAGTAAAGAAGATTCTGGGACCTGCACCCAAGATGGAGCAAAAAGAGCGAAGACCCACATCGAATGACAGAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp CTAAGGAAGTCCCAGGAAGGTCAAACTGTAACAATTTCTGTGAACTaGGAGATAGGGGAGAAGTTGGAGTCTTCTGAGATCTTCCCTTGT +
Preference number: 6 (lower is better)
Translates to: LRKSQEGQTVTISVN*EIGEKLESSEIFPC
Trigger: ACAAGGGAAGATCTCAGAAGACTCCAACTTCTCCCCTATCTCCAAGTTCACAGAAATTGTTACAGTTTGACCTTCCTGGGACTTCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp GAAGAGCTCAAACCAAAATCTTCATCAAACCAGTCTTaGTCATCTAATGCGCTCAGGAACTCTCGGCTGATC +
Preference number: 6 (lower is better)
Translates to: EELKPKSSSNQS*SSNALRNSRLI
Trigger: GATCAGCCGAGAGTTCCTGAGCGCATTAGATGATCAAGACTGGTTTGATGAAGATTTTGGTTTGAGCTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp CTAGAATTGATTCTGCATGGCTTCATCCAGACAGGCTaGTTCACGTTGGGATCCTCAGCAAATATTTCCTCA +
Preference number: 6 (lower is better)
Translates to: LELILHGFIQTG*FTLGSSANISS
Trigger: TGAGGAAATATTTGCTGAGGATCCCAACGTGAATCAGCCTGTCTGGATGAAGCCATGCAGAATCAATTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp TCTTCCCATGGTCCTTTGCTTTGTGTACCACCTATGTaGCCAAAAAGTGGCAAGAATTTCTCAGCTTCTTTC +
Preference number: 6 (lower is better)
Translates to: SSHGPLLCVPPM*PKSGKNFSASF
Trigger: GAAAGAAGCTGAGAAATTCTTGCCACTTTTTGGGCACATAGGTGGTACACAAAGCAAAGGACCATGGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp TTTGGAGTAAGTTTCCTGAAGCCGTCTAGAGACCAATaGGTCAGAAGGAGGCACAGTTTTTGCTTTAGAGAA +
Preference number: 6 (lower is better)
Translates to: FGVSFLKPSRDQ*VRRRHSFCFRE
Trigger: TTCTCTAAAGCAAAAACTGTGCCTCCTTCTGACCCATTGGTCTCTAGACGGCTTCAGGAAACTTACTCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp AATCAACATGTTCAGCAATGGATGCCAAGGACCCTCTaGAACGCTCTGACTCTGTTACAGATTTCCAAGTTT +
Preference number: 6 (lower is better)
Translates to: NQHVQQWMPRTL*NALTLLQISKF
Trigger: AAACTTGGAAATCTGTAACAGAGTCAGAGCGTTCCAGAGGGTCCTTGGCATCCATTGCTGAACATGTTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS CAA 72 bp TCCCAGGAAGGTCAAACTGTAACAATTTCTGTGAACTaGGAGATAGGGGAGAAGTTGGAGTCTTCTGAGATC +
Preference number: 6 (lower is better)
Translates to: SQEGQTVTISVN*EIGEKLESSEI
Trigger: GATCTCAGAAGACTCCAACTTCTCCCCTATCTCCAAGTTCACAGAAATTGTTACAGTTTGACCTTCCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp GCTGTTTCAGATCTGTGTAGTGGGTGTGGCTTGATTTaGGGTTTTTCGGATACGGAGGAGAGAGTTTTCATT +
Preference number: 6 (lower is better)
Translates to: AVSDLCSGCGLI*GFSDTEERVFI
Trigger: AATGAAAACTCTCTCCTCCGTATCCGAAAAACCCAAAATCAAGCCACACCCACTACACAGATCTGAAACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS CAA 72 bp TTTCTGTGGCTGGTTTATCTAAGTCTTGCTGCACATTaGCAGAGTCTGAGGGAAGTTCTTTACTTGACAGGG +
Preference number: 6 (lower is better)
Translates to: FLWLVYLSLAAH*QSLREVLYLTG
Trigger: CCCTGTCAAGTAAAGAACTTCCCTCAGACTCTGCAAATGTGCAGCAAGACTTAGATAAACCAGCCACAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp TTAAATCAAAAACCGCCTGTTTGTAGACTCTTCTACTaGTGCTGCCTATGTCTAGACCTTTGCTGGCACCAC +
Preference number: 6 (lower is better)
Translates to: LNQKPPVCRLFY*CCLCLDLCWHH
Trigger: GTGGTGCCAGCAAAGGTCTAGACATAGGCAGCACAAGTAGAAGAGTCTACAAACAGGCGGTTTTTGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp AGTAAAAATATTAATGACGCTGTGTGGACTTCCCTTTaGCAGTTCTTCCCATGGTCCTTTGCTTTGTGTACC +
Preference number: 6 (lower is better)
Translates to: SKNINDAVWTSL*QFFPWSFALCT
Trigger: GGTACACAAAGCAAAGGACCATGGGAAGAACTGGCAAAGGGAAGTCCACACAGCGTCATTAATATTTTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp CATTCGATGTGGGTCTTCGCTCTTTTTGCTCCATCTTaGGTGCAGGTCCCAGAATCTTCTTTACTAATTTTT +
Preference number: 6 (lower is better)
Translates to: HSMWVFALFAPS*VQVPESSLLIF
Trigger: AAAAATTAGTAAAGAAGATTCTGGGACCTGCACCCAAGATGGAGCAAAAAGAGCGAAGACCCACATCGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp GCTGTTGCCACTTTCCTGACTTTCGTTGTCACCGAGTaGTCAACATTAACAACCATTACTGGATGGTCAATA +
Preference number: 6 (lower is better)
Translates to: AVATFLTFVVTE*STLTTITGWSI
Trigger: TATTGACCATCCAGTAATGGTTGTTAATGTTGACAACTCGGTGACAACGAAAGTCAGGAAAGTGGCAACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS CAA 72 bp TCATTCGATGTGGGTCTTCGCTCTTTTTGCTCCATCTaGGGTGCAGGTCCCAGAATCTTCTTTACTAATTTT +
Preference number: 6 (lower is better)
Translates to: SFDVGLRSFCSI*GAGPRIFFTNF
Trigger: AAAATTAGTAAAGAAGATTCTGGGACCTGCACCCAAGATGGAGCAAAAAGAGCGAAGACCCACATCGAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp TTGTCAACATTAACAACCATTACTGGATGGTCAATATaGCCTAGAGTCTGGGCCTGGCCGTTTATTTCTTCT +
Preference number: 6 (lower is better)
Translates to: LSTLTTITGWSI*PRVWAWPFISS
Trigger: AGAAGAAATAAACGGCCAGGCCCAGACTCTAGGTCATATTGACCATCCAGTAATGGTTGTTAATGTTGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS CCA 72 bp ATATCATGTTGCTGCCGCTTTGAAATATCTGATCTTTaGGAATTACAGGCACTAGAGGATGGAGAAGAGTCA +
Preference number: 6 (lower is better)
Translates to: ISCCCRFEISDL*ELQALEDGEES
Trigger: TGACTCTTCTCCATCCTCTAGTGCCTGTAATTCCCAAAGATCAGATATTTCAAAGCGGCAGCAACATGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS CCA 72 bp CGTCCAAACTTCATCATTTTCTGCCAATCTGTTTTGTaGTTTGGCTCCTTCTTGAGACTAAGCAGTTTGAGT +
Preference number: 6 (lower is better)
Translates to: RPNFIIFCQSVL*FGSFLRLSSLS
Trigger: ACTCAAACTGCTTAGTCTCAAGAAGGAGCCAAACCACAAAACAGATTGGCAGAAAATGATGAAGTTTGGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp TTTCAGGGCTTCAATACGATCCAGTTTAGTCTTATATaGGCTGGTACTAGGTTTCAACAAGGCATCTGGATG +
Preference number: 6 (lower is better)
Translates to: FQGFNTIQFSLI*AGTRFQQGIWM
Trigger: CATCCAGATGCCTTGTTGAAACCTAGTACCAGCCAATATAAGACTAAACTGGATCGTATTGAAGCCCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp TTCCGTCCAAACTTCATCATTTTCTGCCAATCTGTTTaGTGGTTTGGCTCCTTCTTGAGACTAAGCAGTTTG +
Preference number: 6 (lower is better)
Translates to: FRPNFIIFCQSV*WFGSFLRLSSL
Trigger: CAAACTGCTTAGTCTCAAGAAGGAGCCAAACCACAAAACAGATTGGCAGAAAATGATGAAGTTTGGACGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp GAGTCAGACAGCAGCATCACTTTCGGATCAACATCATGTTCCATGTaGTTAAGAGAAGGCTTTGAATTGTTCTCACTTCCTTTTGTTCTG +
Preference number: 6 (lower is better)
Translates to: ESDSSITFGSTSCSM*LREGFELFSLPFVL
Trigger: CAGAACAAAAGGAAGTGAGAACAATTCAAAGCCTTCTCTTAACAACATGGAACATGATGTTGATCCGAAAGTGATGCTGCTGTCTGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS CAA 90 bp TCTCTTTTCTTCCGTCCAAACTTCATCATTTTCTGCCAATCTGTTTaGTGGTTTGGCTCCTTCTTGAGACTAAGCAGTTTGAGTACTTCG +
Preference number: 6 (lower is better)
Translates to: SLFFRPNFIIFCQSV*WFGSFLRLSSLSTS
Trigger: CGAAGTACTCAAACTGCTTAGTCTCAAGAAGGAGCCAAACCACAAAACAGATTGGCAGAAAATGATGAAGTTTGGACGGAAGAAAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp AACTTCATCATTTTCTGCCAATCTGTTTTGTGGTTTGGCTCCTTCTaGAGACTAAGCAGTTTGAGTACTTCGGTTGTTATGAAGTGCTTG +
Preference number: 6 (lower is better)
Translates to: NFIIFCQSVLWFGSF*RLSSLSTSVVMKCL
Trigger: CAAGCACTTCATAACAACCGAAGTACTCAAACTGCTTAGTCTCAAGAAGGAGCCAAACCACAAAACAGATTGGCAGAAAATGATGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp ATCAAATTTCAGGGAGTATTCTGTTGCAATAGAAGTTaGGTCTTTCTCATCAGGCAGAGACGGAATACTGTC +
Preference number: 6 (lower is better)
Translates to: IKFQGVFCCNRS*VFLIRQRRNTV
Trigger: GACAGTATTCCGTCTCTGCCTGATGAGAAAGACTCAACTTCTATTGCAACAGAATACTCCCTGAAATTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS TCA 72 bp CACACAAGTAGCATTCTCCCCTGCTTTTCACTGATCTaGTTGAGAACATCAATAGTATCTTTGATCAAGGTC +
Preference number: 6 (lower is better)
Translates to: HTSSILPCFSLI*LRTSIVSLIKV
Trigger: GACCTTGATCAAAGATACTATTGATGTTCTCAATCAGATCAGTGAAAAGCAGGGGAGAATGCTACTTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp AAGTTAACGGTCCTGAAGCCGTATTATGACTCTTCTTaGCTGGTAAAACAGATTCATAGTCCTTGTGCAAAA +
Preference number: 6 (lower is better)
Translates to: KLTVLKPYYDSS*LVKQIHSPCAK
Trigger: TTTTGCACAAGGACTATGAATCTGTTTTACCAGCCAAGAAGAGTCATAATACGGCTTCAGGACCGTTAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp TTTGACATAGATAAGCAACTTTTGGGAGGTGAATGTTaGCTAGGAGAGGTAGATTCCAGCTCCTGTGAAAAA +
Preference number: 6 (lower is better)
Translates to: FDIDKQLLGGEC*LGEVDSSSCEK
Trigger: TTTTTCACAGGAGCTGGAATCTACCTCTCCTAGCAAACATTCACCTCCCAAAAGTTGCTTATCTATGTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS CAA 72 bp TTGCTAGATTCTTGCTTTGACATAGATAAGCAACTTTaGGGAGGTGAATGTTTGCTAGGAGAGGTAGATTCC +
Preference number: 6 (lower is better)
Translates to: LLDSCFDIDKQL*GGECLLGEVDS
Trigger: GGAATCTACCTCTCCTAGCAAACATTCACCTCCCAAAAGTTGCTTATCTATGTCAAAGCAAGAATCTAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS CAA 72 bp GTTTTGTGGTTTGGCTCCTTCTTGAGACTAAGCAGTTaGAGTACTTCGGTTGTTATGAAGTGCTTGATTTCA +
Preference number: 6 (lower is better)
Translates to: VLWFGSFLRLSS*STSVVMKCLIS
Trigger: TGAAATCAAGCACTTCATAACAACCGAAGTACTCAAACTGCTTAGTCTCAAGAAGGAGCCAAACCACAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 72 bp ATTTTCTGCCAATCTGTTTTGTGGTTTGGCTCCTTCTaGAGACTAAGCAGTTTGAGTACTTCGGTTGTTATG +
Preference number: 6 (lower is better)
Translates to: IFCQSVLWFGSF*RLSSLSTSVVM
Trigger: CATAACAACCGAAGTACTCAAACTGCTTAGTCTCAAGAAGGAGCCAAACCACAAAACAGATTGGCAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp TGCCAATCTGTTTTGTGGTTTGGCTCCTTCTTGAGACTAAGCAGTTaGAGTACTTCGGTTGTTATGAAGTGCTTGATTTCATCAAGATTA +
Preference number: 6 (lower is better)
Translates to: CQSVLWFGSFLRLSS*STSVVMKCLISSRL
Trigger: TAATCTTGATGAAATCAAGCACTTCATAACAACCGAAGTACTCAAACTGCTTAGTCTCAAGAAGGAGCCAAACCACAAAACAGATTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CAA 90 bp TTCGGATCAACATCATGTTCCATGTTGTTAAGAGAAGGCTTTGAATaGTTCTCACTTCCTTTTGTTCTGTTAGGCATTTCATCCTCAGTT +
Preference number: 6 (lower is better)
Translates to: FGSTSCSMLLREGFE*FSLPFVLLGISSSV
Trigger: AACTGAGGATGAAATGCCTAACAGAACAAAAGGAAGTGAGAACAATTCAAAGCCTTCTCTTAACAACATGGAACATGATGTTGATCCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS TCA 72 bp ACGATTGTTTCTTCTGCCTTATTCTTTTGGATCTTGTaGGAAGAGCTCAAACCAAAATCTTCATCAAACCAG +
Preference number: 6 (lower is better)
Translates to: TIVSSALFFWIL*EELKPKSSSNQ
Trigger: CTGGTTTGATGAAGATTTTGGTTTGAGCTCTTCTCACAAGATCCAAAAGAATAAGGCAGAAGAAACAATCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS CCA 72 bp CTCTCTTTGCATATGCAGATAGTGACCTTTCTGATATaGCTCTCTCAGAACATGATAATGAAGAATCAACAT +
Preference number: 6 (lower is better)
Translates to: LSLHMQIVTFLI*LSQNMIMKNQH
Trigger: ATGTTGATTCTTCATTATCATGTTCTGAGAGAGCCATATCAGAAAGGTCACTATCTGCATATGCAAAGAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129865.9
ENSMUST00000138762.8
CDS TCA 72 bp TTTCTGCTCTTGATTATAGGGTTGGTACTGTTCATCTaGGTAAGACTCTTCATCTTCATTTATGTCTGTATC +
Preference number: 6 (lower is better)
Translates to: FLLLIIGLVLFI*VRLFIFIYVCI
Trigger: GATACAGACATAAATGAAGATGAAGAGTCTTACTCAGATGAACAGTACCAACCCTATAATCAAGAGCAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000138762.8
CDS GCA 72 bp CGCTCTTTAAGTTTTTCCAGTTTAATATCATGTTGCTaGCGCTTTGAAATATCTGATCTTTGGGAATTACAG +
Preference number: 6 (lower is better)
Translates to: RSLSFSSLISCC*RFEISDLWELQ
Trigger: CTGTAATTCCCAAAGATCAGATATTTCAAAGCGGCAGCAACATGATATTAAACTGGAAAAACTTAAAGAGCG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS CAA 72 bp ACATCATGTTCCATGTTGTTAAGAGAAGGCTTTGAATaGTTCTCACTTCCTTTTGTTCTGTTAGGCATTTCA +
Preference number: 6 (lower is better)
Translates to: TSCSMLLREGFE*FSLPFVLLGIS
Trigger: TGAAATGCCTAACAGAACAAAAGGAAGTGAGAACAATTCAAAGCCTTCTCTTAACAACATGGAACATGATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8
CDS GCA 72 bp ATCCGCTCTTTAAGTTTTTCCAGTTTAATATCATGTTaGTGCCGCTTTGAAATATCTGATCTTTGGGAATTA +
Preference number: 6 (lower is better)
Translates to: IRSLSFSSLISC*CRFEISDLWEL
Trigger: TAATTCCCAAAGATCAGATATTTCAAAGCGGCAGCAACATGATATTAAACTGGAAAAACTTAAAGAGCGGAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000124495.3
ENSMUST00000138762.8