Pregenerated sensors for CEP295NL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000076433Ensembl transcript IDs: ENSMUST00000103024.4, ENSMUST00000168100.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTACTTGGGGTGCTGCCTaGGGTGCTCCTCCCTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSATWGAA*GAPPCG Trigger: GCCGCAGGGAGGAGCACCCCAGGCAGCACCCCAAGT...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR GCA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTTTCCGGGACTTGGGGTaGTGCCTGGGGTGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLFRDLG*CLGCSS Trigger: GGAGGAGCACCCCAGGCAGCACCCCAAGTCCCGGAA...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CCA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTCTTCTCACCGGAGGCTaGGCCCCGGGCTTTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLLLTGG*APGFGR Trigger: TCTGCCAAAGCCCGGGGCCCAGCCTCCGGTGAGAAG...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR TCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTGTCCTCCAACAAAGGTaGCTTGGGCGGCTCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSAVLQQR*LGRLLS Trigger: GGACAGGAGCCGCCCAAGTCACCTTTGTTGGAGGAC...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CCA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTCTGGGCCCCGGGCTTTaGCAGAACTGCGTCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLLGPGL*QNCVSL Trigger: CAGAGAGACGCAGTTCTGCCAAAGCCCGGGGCCCAG...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTCCTCTTGTTTGCAGGTaGGGCCGTGGAGCAAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSAPLVCR*GRGARA Trigger: AGCCCTTGCTCCACGGCCCCACCTGCAAACAAGAGG...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR GCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTGCGTTGCAGCTGCCGTaGTTTCCACTGCTGCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSAALQLP*FPLLQS Trigger: ACTCTGCAGCAGTGGAAAGCACGGCAGCTGCAACGC...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR GCA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTTGCAGCCGGGCCTCCTaGCACTCTGCCTTTAACTCC | + |
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Preference number: 4 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLCSRAS*HSAFNS Trigger: GGAGTTAAAGGCAGAGTGGCAGGAGGCCCGGCTGCA...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTCTTGTTGTACTTGCTTaGGGGCTCCTGGGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSALVVLA*GLLGCS Trigger: GCTGCAGCCCAGGAGCCCCCAAGCAAGTACAACAAG...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR TCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTGATTCTGGTCTGCCTTaGGCCTCTGTTCCAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSADSGLP*ASVPGA Trigger: TGCACCTGGAACAGAGGCTCAAGGCAGACCAGAATC...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR GCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTGGGCTTTGGCAGAACTaGGTCTCTCTGAGCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSAGLWQN*VSLSMV Trigger: CACCATGCTCAGAGAGACGCAGTTCTGCCAAAGCCC...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTCCACTGCTGCAGAGTaGTACTGTCCTCCTCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSASTAAE*YCPPLG Trigger: CCCAAGAGGAGGACAGTACCACTCTGCAGCAGTGGA...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CCA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTTGGACCACATCTCAGTaGTCTCCACCTCGGTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLWTTSQ*SPPRLG Trigger: GCCCAACCGAGGTGGAGACCACTGAGATGTGGTCCA...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTCCAACAAAGGTGACTTaGGCGGCTCCTGTCCTGACT | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSAPTKVT*AAPVLT Trigger: AGTCAGGACAGGAGCCGCCCAAGTCACCTTTGTTGG...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR TCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTAGAACTGCGTCTCTCTaGGCATGGTGCCTTTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSARTASL*AWCLFP Trigger: CGGAAAAAGGCACCATGCTCAGAGAGACGCAGTTCT...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR GCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTCTCTGGTTCTGTTCATaGACGCTGGGATCGTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSALWFCS*TLGSFP Trigger: GGGAAACGATCCCAGCGTGCATGAACAGAACCAGAG...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR GCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTGCCTTTTGCCTTCTCTaGTCCAACTCTGCCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSAAFCLL*SNSAFC Trigger: GCAGAAGGCAGAGTTGGAGCAGAGAAGGCAAAAGGC...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTCTGTTCATGCACGCTaGGATCGTTTCCCATGCTCC | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSASVHAR*DRFPCS Trigger: GGAGCATGGGAAACGATCCCAGCGTGCATGAACAGA...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR TCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTCATCAAAGAATGGGTTaGGCTTTGCCACACCTACCC | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSAHQRMG*ALPHLP Trigger: GGGTAGGTGTGGCAAAGCTCAACCCATTCTTTGATG...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR GCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTTAGGGCTGTTGTTTTaGCCTGTAGACTCTGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSALGLLF*PVDSGP Trigger: GGGACCAGAGTCTACAGGGCAAAACAACAGCCCTAA...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR GCA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTTCTGCACGTCCTCCATaGAGTCAGTGTCTCCATCAA | + |
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Preference number: 4 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLSARPP*SQCLHQ Trigger: TTGATGGAGACACTGACTGCATGGAGGACGTGCAGA...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR GCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTCTGCCTTCTGCTTTTaGCTCAAAGCCATCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSASAFCF*LKAIQL Trigger: AAGCTGGATGGCTTTGAGGCAAAAGCAGAAGGCAGA...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR GCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTCCAACTCTGCCTTCTaGTTTTGCCTCAAAGCCATC | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSASNSAF*FCLKAI Trigger: GATGGCTTTGAGGCAAAAGCAGAAGGCAGAGTTGGA...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CCA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTTGCTCATCTGGATTCTaGTCTGCCTTGAGCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLCSSGF*SALSLC Trigger: ACAGAGGCTCAAGGCAGACCAGAATCCAGATGAGCA...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CCA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTTCTCCAAGCTCATGTTaGGGTGTTCTGTCAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLSPSSC*GVLSAP Trigger: TGGAGCTGACAGAACACCCCAACATGAGCTTGGAGA...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR GCA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTAGCCCTTGTGTGTTTTaGTGTTCTTCTCTGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: HGAGKAAIRDVFIMGGSASPCVF*CSSLVL Trigger: CAGAACCAGAGAAGAACAGCAAAACACACAAGGGCT...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR GCA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTTCTCTGCTCCAACTCTaGCTTCTGCTTTTGCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLSLLQL*LLLLPQ Trigger: TTGAGGCAAAAGCAGAAGGCAGAGTTGGAGCAGAGA...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CCA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTGTCTCCATCAAAGAATaGGTTGAGCTTTGCCACACC | + |
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Preference number: 4 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLVSIKE*VELCHT Trigger: GGTGTGGCAAAGCTCAACCCATTCTTTGATGGAGAC...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CCA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTTCTAAGATCTGCTGCTaGAGGTCACGAATCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLSKICC*RSRIIW Trigger: CCAGATGATTCGTGACCTCCAGCAGCAGATCTTAGA...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CCA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTTTTGCTGTTCTTCTCTaGTTCTGTTCATGCACGCTG | + |
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Preference number: 4 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLFAVLL*FCSCTL Trigger: CAGCGTGCATGAACAGAACCAGAGAAGAACAGCAAA...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR TCA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTGTATCTGTTTCAGATTaGCTTTGGACCACATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLVSVSD*LWTTSQ Trigger: CTGAGATGTGGTCCAAAGTCAATCTGAAACAGATAC...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CCA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTCTTGCAAGCGTTTCCTaGCTTTTTCCAAAAACTCCT | + |
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Preference number: 4 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLLASVS*LFPKTP Trigger: AGGAGTTTTTGGAAAAAGCCAGGAAACGCTTGCAAG...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS GCA 90 bp | AGCCGGGCCTCCTGCCACTCTGCCTTTAACTCCTCAGCCAGGCGTTaGAGCTGCCGTGCTTTCCACTGCTGCAGAGTGGTACTGTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SRASCHSAFNSSARR*SCRAFHCCRVVLSS Trigger: GGAGGACAGTACCACTCTGCAGCAGTGGAAAGCACGGCAGCTGCAACGCCTGGCTGAGGAGTTAAAGGCAGAGTGGCAGGAGGCCCGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS GCA 90 bp | GCCTCCTGCCACTCTGCCTTTAACTCCTCAGCCAGGCGTTGCAGCTaGCGTGCTTTCCACTGCTGCAGAGTGGTACTGTCCTCCTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: ASCHSAFNSSARRCS*RAFHCCRVVLSSSW Trigger: CCAAGAGGAGGACAGTACCACTCTGCAGCAGTGGAAAGCACGGCAGCTGCAACGCCTGGCTGAGGAGTTAAAGGCAGAGTGGCAGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS CCA 90 bp | TGTACTTGCTTGGGGGCTCCTGGGCTGCAGCCTCTTGTTTGCAGGTaGGGCCGTGGAGCAAGGGCTGAGTTAGGGCTGTTGTTTTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: CTCLGAPGLQPLVCR*GRGARAELGLLFCP Trigger: AGGGCAAAACAACAGCCCTAACTCAGCCCTTGCTCCACGGCCCCACCTGCAAACAAGAGGCTGCAGCCCAGGAGCCCCCAAGCAAGTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS-3UTR CAA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTGCTGCAGCCTCTTGTTaGCAGGTGGGGCCGTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: HGAGKAAIRDVFIMGGSAAAASC*QVGPWS Trigger: GCTCCACGGCCCCACCTGCAAACAAGAGGCTGCAGC...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CAA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTCTGGGCTGCAGCCTCTaGTTTGCAGGTGGGGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: HGAGKAAIRDVFIMGGSALGCSL*FAGGAV Trigger: CACGGCCCCACCTGCAAACAAGAGGCTGCAGCCCAG...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS GCA 90 bp | TTTAACTCCTCAGCCAGGCGTTGCAGCTGCCGTGCTTTCCACTGCTaGAGAGTGGTACTGTCCTCCTCTTGGGCTGGCATCTCTAACGGC | + |
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Preference number: 5 (lower is better) Translates to: FNSSARRCSCRAFHC*RVVLSSSWAGISNG Trigger: GCCGTTAGAGATGCCAGCCCAAGAGGAGGACAGTACCACTCTGCAGCAGTGGAAAGCACGGCAGCTGCAACGCCTGGCTGAGGAGTTAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS GCA 90 bp | TTTGTGCCACAGATTCTTGTTGTACTTGCTTGGGGGCTCCTGGGCTaGAGCCTCTTGTTTGCAGGTGGGGCCGTGGAGCAAGGGCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: FVPQILVVLAWGLLG*SLLFAGGAVEQGLS Trigger: ACTCAGCCCTTGCTCCACGGCCCCACCTGCAAACAAGAGGCTGCAGCCCAGGAGCCCCCAAGCAAGTACAACAAGAATCTGTGGCACAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS TCA 90 bp | CGTCCTCTCCTCTCTCGGGGTGCCAAAGGTCTCACTCCGAATCTCTaGGTAGCTCTGCTGCTCATCTGGATTCTGGTCTGCCTTGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: RPLLSRGAKGLTPNL*VALLLIWILVCLEP Trigger: AGGCTCAAGGCAGACCAGAATCCAGATGAGCAGCAGAGCTACTCAGAGATTCGGAGTGAGACCTTTGGCACCCCGAGAGAGGAGAGGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS CCA 90 bp | ATTTCTTTGTGCCACAGATTCTTGTTGTACTTGCTTGGGGGCTCCTaGGCTGCAGCCTCTTGTTTGCAGGTGGGGCCGTGGAGCAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: ISLCHRFLLYLLGGS*AAASCLQVGPWSKG Trigger: GCCCTTGCTCCACGGCCCCACCTGCAAACAAGAGGCTGCAGCCCAGGAGCCCCCAAGCAAGTACAACAAGAATCTGTGGCACAAAGAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS CCA 90 bp | CCCTTGTGTGTTTTGCTGTTCTTCTCTGGTTCTGTTCATGCACGCTaGGATCGTTTCCCATGCTCCGCTCGGCTGCCTCGTCCAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: PLCVLLFFSGSVHAR*DRFPCSARLPRPTG Trigger: ACCTGTTGGACGAGGCAGCCGAGCGGAGCATGGGAAACGATCCCAGCGTGCATGAACAGAACCAGAGAAGAACAGCAAAACACACAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS CCA 90 bp | GGTAGATTCGATTTCTTTGTGCCACAGATTCTTGTTGTACTTGCTTaGGGGCTCCTGGGCTGCAGCCTCTTGTTTGCAGGTGGGGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: GRFDFFVPQILVVLA*GLLGCSLLFAGGAV Trigger: CACGGCCCCACCTGCAAACAAGAGGCTGCAGCCCAGGAGCCCCCAAGCAAGTACAACAAGAATCTGTGGCACAAAGAAATCGAATCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS-3UTR CAA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTTCTTGTTGTACTTGCTaGGGGGCTCCTGGGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLSCCTC*GAPGLQ Trigger: CTGCAGCCCAGGAGCCCCCAAGCAAGTACAACAAGA...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS-3UTR CAA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTTCCAACAAAGGTGACTaGGGCGGCTCCTGTCCTGAC | + |
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Preference number: 5 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLSNKGD*GGSCPD Trigger: GTCAGGACAGGAGCCGCCCAAGTCACCTTTGTTGGA...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
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| CDS TCA 90 bp | GCTGGTATCTGGGGTACTCTGAGTCACTCAGTATCTGTTTCAGATTaGCTTTGGACCACATCTCAGTGGTCTCCACCTCGGTTGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGIWGTLSHSVSVSD*LWTTSQWSPPRLGS Trigger: GGAGCCCAACCGAGGTGGAGACCACTGAGATGTGGTCCAAAGTCAATCTGAAACAGATACTGAGTGACTCAGAGTACCCCAGATACCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS-3UTR CAA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTTGTGCCACAGATTCTaGTTGTACTTGCTTGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HGAGKAAIRDVFIMGGSALCHRF*LYLLGG Trigger: GCCCCCAAGCAAGTACAACAAGAATCTGTGGCACAA...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
||
| CDS-3UTR CAA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTCTAGATGTCCCTGCCTaGACAGGCACTAGGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLLDVPA*TGTRLS Trigger: TGAAAGCCTAGTGCCTGTCAAGGCAGGGACATCTAG...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
||
| CDS-3UTR CAA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTCTCTGCCTTCTGCTTTaGCCTCAAAGCCATCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLLCLLL*PQSHPA Trigger: AGCTGGATGGCTTTGAGGCAAAAGCAGAAGGCAGAG...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
||
| CDS-3UTR CAA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTATCTCCAAGCTCATGTaGGGGTGTTCTGTCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLISKLM*GCSVSS Trigger: GGAGCTGACAGAACACCCCAACATGAGCTTGGAGAT...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
||
| CDS-3UTR CAA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTCCAGTGGAATTAGATTaGAGGAGAGCCAAGCGCATC | + |
|
Preference number: 5 (lower is better) Translates to: HGAGKAAIRDVFIMGGSAPVELD*RRAKRI Trigger: GATGCGCTTGGCTCTCCTCAAATCTAATTCCACTGG...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
||
| CDS CCA 90 bp | GTTCTTCCTCCAGCTCAGCCTTGTAGTGGATCTCCAAGCTCATGTTaGGGTGTTCTGTCAGCTCCAAAAGTGCCTTTTGCCTTCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLPPAQPCSGSPSSC*GVLSAPKVPFAFSA Trigger: AGCAGAGAAGGCAAAAGGCACTTTTGGAGCTGACAGAACACCCCAACATGAGCTTGGAGATCCACTACAAGGCTGAGCTGGAGGAAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS-3UTR CAA 90 bp | ACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTTCCATCAAAGAATGGGTaGAGCTTTGCCACACCTACC | + |
|
Preference number: 5 (lower is better) Translates to: TVQAKQPSGMYLSWVGLLPSKNG*SFATPT Trigger: GGTAGGTGTGGCAAAGCTCAACCCATTCTTTGATGG...AAGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
||
| CDS CCA 90 bp | AACTTGTTTTGCTCTAAGATCTGCTGCTGGAGGTCACGAATCATCTaGTTCTGTTTGTCCTCATCGAGAAGGCCGTTGTCCAGGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: NLFCSKICCWRSRII*FCLSSSRRPLSRDR Trigger: CCTGTCCCTGGACAACGGCCTTCTCGATGAGGACAAACAGAACCAGATGATTCGTGACCTCCAGCAGCAGATCTTAGAGCAAAACAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS GCA 90 bp | CTCTCTGAAAGCTGCTCGGTTTCTCTCTTTAGCCCTTGTGTGTTTTaGTGTTCTTCTCTGGTTCTGTTCATGCACGCTGGGATCGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSESCSVSLFSPCVF*CSSLVLFMHAGIVS Trigger: GGAAACGATCCCAGCGTGCATGAACAGAACCAGAGAAGAACAGCAAAACACACAAGGGCTAAAGAGAGAAACCGAGCAGCTTTCAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS-3UTR CAA 90 bp | CACGGTGCAGGCAAAGCAGCCATCAGGGATGTATTTATCATGGGTGGGTCTGCTAGTATCTGTTTCAGATaGACTTTGGACCACATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HGAGKAAIRDVFIMGGSASICFR*TLDHIS Trigger: TGAGATGTGGTCCAAAGTCAATCTGAAACAGATACT...AGCAGACCCACCCATGATAAATACATCCCTGATGGCTGCTTTGCCTGCACCGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103024.4 |
||
| CDS CCA 90 bp | TCCAAAAACTCCTGGTGTAACTTGTTTTGCTCTAAGATCTGCTGCTaGAGGTCACGAATCATCTGGTTCTGTTTGTCCTCATCGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKNSWCNLFCSKICC*RSRIIWFCLSSSRR Trigger: CCTTCTCGATGAGGACAAACAGAACCAGATGATTCGTGACCTCCAGCAGCAGATCTTAGAGCAAAACAAGTTACACCAGGAGTTTTTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS GCA 90 bp | CTATTCATGTTAAACAATTCTTCAAAGGTAGATTCGATTTCTTTGTaGCACAGATTCTTGTTGTACTTGCTTGGGGGCTCCTGGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LFMLNNSSKVDSISL*HRFLLYLLGGSWAA Trigger: TGCAGCCCAGGAGCCCCCAAGCAAGTACAACAAGAATCTGTGGCACAAAGAAATCGAATCTACCTTTGAAGAATTGTTTAACATGAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CCA 72 bp | TGCGTCTCTCTGAGCATGGTGCCTTTTTCCGGGACTTaGGGTGCTGCCTGGGGTGCTCCTCCCTGCGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: CVSLSMVPFSGT*GAAWGAPPCGP Trigger: GGGGCCGCAGGGAGGAGCACCCCAGGCAGCACCCCAAGTCCCGGAAAAAGGCACCATGCTCAGAGAGACGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CCA 72 bp | TTGGGGGCTCCTGGGCTGCAGCCTCTTGTTTGCAGGTaGGGCCGTGGAGCAAGGGCTGAGTTAGGGCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LGAPGLQPLVCR*GRGARAELGLL Trigger: CAACAGCCCTAACTCAGCCCTTGCTCCACGGCCCCACCTGCAAACAAGAGGCTGCAGCCCAGGAGCCCCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS GCA 72 bp | TCTCACCGGAGGCTGGGCCCCGGGCTTTGGCAGAACTaGGTCTCTCTGAGCATGGTGCCTTTTTCCGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: SHRRLGPGLWQN*VSLSMVPFSGT Trigger: AGTCCCGGAAAAAGGCACCATGCTCAGAGAGACGCAGTTCTGCCAAAGCCCGGGGCCCAGCCTCCGGTGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS GCA 72 bp | GCCGAGGGCCGCCTCCCCTCCCGGAAGAATTCCTTCTaGACGTCCTCCATGCAGTCAGTGTCTCCATCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: AEGRLPSRKNSF*TSSMQSVSPSK Trigger: CTTTGATGGAGACACTGACTGCATGGAGGACGTGCAGAAGGAATTCTTCCGGGAGGGGAGGCGGCCCTCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CAA 72 bp | TCAGGGGGCAGGGCACAGATCCCAGTGGAATTAGATTaGAGGAGAGCCAAGCGCATCCGTCTACGCGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SGGRAQIPVELD*RRAKRIRLRAR Trigger: CCGGGCGCGTAGACGGATGCGCTTGGCTCTCCTCAAATCTAATTCCACTGGGATCTGTGCCCTGCCCCCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS TCA 72 bp | TTAGGGCTGTTGTTTTGCCCTGTAGACTCTGGTCCCTaGGGTTGTGAGTCCCCTTTGCCGAGGGCCGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LGLLFCPVDSGP*GCESPLPRAAS Trigger: GGAGGCGGCCCTCGGCAAAGGGGACTCACAACCTCAGGGACCAGAGTCTACAGGGCAAAACAACAGCCCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CCA 72 bp | GGCGTTGCAGCTGCCGTGCTTTCCACTGCTGCAGAGTaGTACTGTCCTCCTCTTGGGCTGGCATCTCTAACG | + |
|
Preference number: 6 (lower is better) Translates to: GVAAAVLSTAAE*YCPPLGLASLT Trigger: CGTTAGAGATGCCAGCCCAAGAGGAGGACAGTACCACTCTGCAGCAGTGGAAAGCACGGCAGCTGCAACGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CCA 72 bp | GACTTTGGACCACATCTCAGTGGTCTCCACCTCGGTTaGGCTCCCAGACTCCTCGGCGGTTTCTACCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DFGPHLSGLHLG*APRLLGGFYLL Trigger: GAGGAGGTAGAAACCGCCGAGGAGTCTGGGAGCCCAACCGAGGTGGAGACCACTGAGATGTGGTCCAAAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CAA 72 bp | CTTTTACCCTTCTCACCGGAGGCTGGGCCCCGGGCTTaGGCAGAACTGCGTCTCTCTGAGCATGGTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLPFSPEAGPRA*AELRLSEHGAF Trigger: AAAGGCACCATGCTCAGAGAGACGCAGTTCTGCCAAAGCCCGGGGCCCAGCCTCCGGTGAGAAGGGTAAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS TCA 72 bp | GCCTCTTGTTTGCAGGTGGGGCCGTGGAGCAAGGGCTaGGTTAGGGCTGTTGTTTTGCCCTGTAGACTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ASCLQVGPWSKG*VRAVVLPCRLW Trigger: CCAGAGTCTACAGGGCAAAACAACAGCCCTAACTCAGCCCTTGCTCCACGGCCCCACCTGCAAACAAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS GCA 72 bp | CAGATTCTTGTTGTACTTGCTTGGGGGCTCCTGGGCTaGAGCCTCTTGTTTGCAGGTGGGGCCGTGGAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: QILVVLAWGLLG*SLLFAGGAVEQ Trigger: TTGCTCCACGGCCCCACCTGCAAACAAGAGGCTGCAGCCCAGGAGCCCCCAAGCAAGTACAACAAGAATCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CCA 72 bp | TTTTACCCTTCTCACCGGAGGCTGGGCCCCGGGCTTTaGCAGAACTGCGTCTCTCTGAGCATGGTGCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: FYPSHRRLGPGL*QNCVSLSMVPF Trigger: AAAAGGCACCATGCTCAGAGAGACGCAGTTCTGCCAAAGCCCGGGGCCCAGCCTCCGGTGAGAAGGGTAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS GCA 72 bp | GCAGTCAGTGTCTCCATCAAAGAATGGGTTGAGCTTTaGCACACCTACCCTTCTGGTCACCCGAGGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AVSVSIKEWVEL*HTYPSGHPRAL Trigger: CAGGGCCCTCGGGTGACCAGAAGGGTAGGTGTGGCAAAGCTCAACCCATTCTTTGATGGAGACACTGACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS GCA 72 bp | CGGTTTCTACCTCCTCCGTCCTCTCCTCTCTCGGGGTaGCAAAGGTCTCACTCCGAATCTCTGAGTAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RFLPPPSSPLSG*QRSHSESLSSS Trigger: AGAGCTACTCAGAGATTCGGAGTGAGACCTTTGGCACCCCGAGAGAGGAGAGGACGGAGGAGGTAGAAACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS CCA 72 bp | GTTTTGCTGTTCTTCTCTGGTTCTGTTCATGCACGCTaGGATCGTTTCCCATGCTCCGCTCGGCTGCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: VLLFFSGSVHAR*DRFPCSARLPR Trigger: ACGAGGCAGCCGAGCGGAGCATGGGAAACGATCCCAGCGTGCATGAACAGAACCAGAGAAGAACAGCAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS TCA 72 bp | CCTCCATGCAGTCAGTGTCTCCATCAAAGAATGGGTTaGGCTTTGCCACACCTACCCTTCTGGTCACCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: PPCSQCLHQRMG*ALPHLPFWSPE Trigger: CTCGGGTGACCAGAAGGGTAGGTGTGGCAAAGCTCAACCCATTCTTTGATGGAGACACTGACTGCATGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CCA 72 bp | GCTTTCCACTGCTGCAGAGTGGTACTGTCCTCCTCTTaGGCTGGCATCTCTAACGGCTTCTGCCTCAAAACT | + |
|
Preference number: 6 (lower is better) Translates to: AFHCCRVVLSSS*AGISNGFCLKT Trigger: AGTTTTGAGGCAGAAGCCGTTAGAGATGCCAGCCCAAGAGGAGGACAGTACCACTCTGCAGCAGTGGAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CCA 72 bp | CACGTCCTCCATGCAGTCAGTGTCTCCATCAAAGAATaGGTTGAGCTTTGCCACACCTACCCTTCTGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: HVLHAVSVSIKE*VELCHTYPSGH Trigger: GTGACCAGAAGGGTAGGTGTGGCAAAGCTCAACCCATTCTTTGATGGAGACACTGACTGCATGGAGGACGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CCA 72 bp | CCAGCTCAGCCTTGTAGTGGATCTCCAAGCTCATGTTaGGGTGTTCTGTCAGCTCCAAAAGTGCCTTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PAQPCSGSPSSC*GVLSAPKVPFA Trigger: GGCAAAAGGCACTTTTGGAGCTGACAGAACACCCCAACATGAGCTTGGAGATCCACTACAAGGCTGAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CAA 72 bp | TCCTCCATGCAGTCAGTGTCTCCATCAAAGAATGGGTaGAGCTTTGCCACACCTACCCTTCTGGTCACCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SSMQSVSPSKNG*SFATPTLLVTR Trigger: TCGGGTGACCAGAAGGGTAGGTGTGGCAAAGCTCAACCCATTCTTTGATGGAGACACTGACTGCATGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CAA 90 bp | TGCTCTAAGATCTGCTGCTGGAGGTCACGAATCATCTGGTTCTGTTaGTCCTCATCGAGAAGGCCGTTGTCCAGGGACAGGTTGTTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: CSKICCWRSRIIWFC*SSSRRPLSRDRLFR Trigger: CCGAAACAACCTGTCCCTGGACAACGGCCTTCTCGATGAGGACAAACAGAACCAGATGATTCGTGACCTCCAGCAGCAGATCTTAGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CAA 90 bp | TGCTGGTATCTGGGGTACTCTGAGTCACTCAGTATCTGTTTCAGATaGACTTTGGACCACATCTCAGTGGTCTCCACCTCGGTTGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: CWYLGYSESLSICFR*TLDHISVVSTSVGL Trigger: GAGCCCAACCGAGGTGGAGACCACTGAGATGTGGTCCAAAGTCAATCTGAAACAGATACTGAGTGACTCAGAGTACCCCAGATACCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS GCA 72 bp | CTCTGCCTTCTGCTTTTGCCTCAAAGCCATCCAGCTTaGTACAGAGTCTGCCTGTTTCTGCAGGTAAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LCLLLLPQSHPA*YRVCLFLQVRL Trigger: AAGCCTTACCTGCAGAAACAGGCAGACTCTGTAGCAAGCTGGATGGCTTTGAGGCAAAAGCAGAAGGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CCA 72 bp | TGCTCTAAGATCTGCTGCTGGAGGTCACGAATCATCTaGTTCTGTTTGTCCTCATCGAGAAGGCCGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CSKICCWRSRII*FCLSSSRRPLS Trigger: GGACAACGGCCTTCTCGATGAGGACAAACAGAACCAGATGATTCGTGACCTCCAGCAGCAGATCTTAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CAA 72 bp | ACTCTGCCTTCTGCTTTTGCCTCAAAGCCATCCAGCTaGCTACAGAGTCTGCCTGTTTCTGCAGGTAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TLPSAFASKPSS*LQSLPVSAGKA Trigger: AGCCTTACCTGCAGAAACAGGCAGACTCTGTAGCAAGCTGGATGGCTTTGAGGCAAAAGCAGAAGGCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS TCA 72 bp | TGGGGTACTCTGAGTCACTCAGTATCTGTTTCAGATTaGCTTTGGACCACATCTCAGTGGTCTCCACCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: WGTLSHSVSVSD*LWTTSQWSPPR Trigger: CCGAGGTGGAGACCACTGAGATGTGGTCCAAAGTCAATCTGAAACAGATACTGAGTGACTCAGAGTACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS GCA 72 bp | AGCTGCTCGGTTTCTCTCTTTAGCCCTTGTGTGTTTTaGTGTTCTTCTCTGGTTCTGTTCATGCACGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SCSVSLFSPCVF*CSSLVLFMHAG Trigger: CCCAGCGTGCATGAACAGAACCAGAGAAGAACAGCAAAACACACAAGGGCTAAAGAGAGAAACCGAGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS GCA 72 bp | ATTCGATTTCTTTGTGCCACAGATTCTTGTTGTACTTaGTTGGGGGCTCCTGGGCTGCAGCCTCTTGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: IRFLCATDSCCT*LGAPGLQPLVC Trigger: GCAAACAAGAGGCTGCAGCCCAGGAGCCCCCAAGCAAGTACAACAAGAATCTGTGGCACAAAGAAATCGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CAA 72 bp | GATTCGATTTCTTTGTGCCACAGATTCTTGTTGTACTaGCTTGGGGGCTCCTGGGCTGCAGCCTCTTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: DSISLCHRFLLY*LGGSWAAASCL Trigger: CAAACAAGAGGCTGCAGCCCAGGAGCCCCCAAGCAAGTACAACAAGAATCTGTGGCACAAAGAAATCGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CAA 72 bp | AAGGTAGATTCGATTTCTTTGTGCCACAGATTCTTGTaGTACTTGCTTGGGGGCTCCTGGGCTGCAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: KVDSISLCHRFL*YLLGGSWAAAS Trigger: AGAGGCTGCAGCCCAGGAGCCCCCAAGCAAGTACAACAAGAATCTGTGGCACAAAGAAATCGAATCTACCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CAA 72 bp | TCAAAGGTAGATTCGATTTCTTTGTGCCACAGATTCTaGTTGTACTTGCTTGGGGGCTCCTGGGCTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SKVDSISLCHRF*LYLLGGSWAAA Trigger: GGCTGCAGCCCAGGAGCCCCCAAGCAAGTACAACAAGAATCTGTGGCACAAAGAAATCGAATCTACCTTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CAA 72 bp | CTGGGGTACTCTGAGTCACTCAGTATCTGTTTCAGATaGACTTTGGACCACATCTCAGTGGTCTCCACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LGYSESLSICFR*TLDHISVVSTS Trigger: CGAGGTGGAGACCACTGAGATGTGGTCCAAAGTCAATCTGAAACAGATACTGAGTGACTCAGAGTACCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CCA 72 bp | CTCTCTTTAGCCCTTGTGTGTTTTGCTGTTCTTCTCTaGTTCTGTTCATGCACGCTGGGATCGTTTCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: LSLALVCFAVLL*FCSCTLGSFPM Trigger: CATGGGAAACGATCCCAGCGTGCATGAACAGAACCAGAGAAGAACAGCAAAACACACAAGGGCTAAAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CAA 72 bp | TACTCTGAGTCACTCAGTATCTGTTTCAGATTGACTTaGGACCACATCTCAGTGGTCTCCACCTCGGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: YSESLSICFRLT*DHISVVSTSVG Trigger: CCCAACCGAGGTGGAGACCACTGAGATGTGGTCCAAAGTCAATCTGAAACAGATACTGAGTGACTCAGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
||
| CDS CAA 90 bp | AATTCTTCAAAGGTAGATTCGATTTCTTTGTGCCACAGATTCTTGTaGTACTTGCTTGGGGGCTCCTGGGCTGCAGCCTCTTGTTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: NSSKVDSISLCHRFL*YLLGGSWAAASCLQ Trigger: CTGCAAACAAGAGGCTGCAGCCCAGGAGCCCCCAAGCAAGTACAACAAGAATCTGTGGCACAAAGAAATCGAATCTACCTTTGAAGAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS CAA 72 bp | GAGAGTAAGTCATCTTGTTCTCTAGATGTCCCTGCCTaGACAGGCACTAGGCTTTCACTCTTTAACGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: ESKSSCSLDVPA*TGTRLSLFNGY Trigger: GTACCCGTTAAAGAGTGAAAGCCTAGTGCCTGTCAAGGCAGGGACATCTAGAGAACAAGATGACTTACTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS CAA 90 bp | AACAATTCTTCAAAGGTAGATTCGATTTCTTTGTGCCACAGATTCTaGTTGTACTTGCTTGGGGGCTCCTGGGCTGCAGCCTCTTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: NNSSKVDSISLCHRF*LYLLGGSWAAASCL Trigger: CAAACAAGAGGCTGCAGCCCAGGAGCCCCCAAGCAAGTACAACAAGAATCTGTGGCACAAAGAAATCGAATCTACCTTTGAAGAATTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS CCA 72 bp | TCCTGGTGTAACTTGTTTTGCTCTAAGATCTGCTGCTaGAGGTCACGAATCATCTGGTTCTGTTTGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SWCNLFCSKICC*RSRIIWFCLSS Trigger: TGAGGACAAACAGAACCAGATGATTCGTGACCTCCAGCAGCAGATCTTAGAGCAAAACAAGTTACACCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS CCA 72 bp | CACTCTTTAACGGGTACTTTGCTATCTGCTGGTATCTaGGGTACTCTGAGTCACTCAGTATCTGTTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: HSLTGTLLSAGI*GTLSHSVSVSD Trigger: ATCTGAAACAGATACTGAGTGACTCAGAGTACCCCAGATACCAGCAGATAGCAAAGTACCCGTTAAAGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS CAA 90 bp | TTCCTATTCATGTTAAACAATTCTTCAAAGGTAGATTCGATTTCTTaGTGCCACAGATTCTTGTTGTACTTGCTTGGGGGCTCCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: FLFMLNNSSKVDSIS*CHRFLLYLLGGSWA Trigger: AGCCCAGGAGCCCCCAAGCAAGTACAACAAGAATCTGTGGCACAAAGAAATCGAATCTACCTTTGAAGAATTGTTTAACATGAATAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS GCA 72 bp | TTAAACAATTCTTCAAAGGTAGATTCGATTTCTTTGTaGCACAGATTCTTGTTGTACTTGCTTGGGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LNNSSKVDSISL*HRFLLYLLGGS Trigger: GGAGCCCCCAAGCAAGTACAACAAGAATCTGTGGCACAAAGAAATCGAATCTACCTTTGAAGAATTGTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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| CDS CAA 72 bp | ATGTTAAACAATTCTTCAAAGGTAGATTCGATTTCTTaGTGCCACAGATTCTTGTTGTACTTGCTTGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: MLNNSSKVDSIS*CHRFLLYLLGG Trigger: GCCCCCAAGCAAGTACAACAAGAATCTGTGGCACAAAGAAATCGAATCTACCTTTGAAGAATTGTTTAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103024.4 ENSMUST00000168100.2 |
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