Pregenerated sensors for CEP290 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019971Ensembl transcript IDs: ENSMUST00000164751.2, ENSMUST00000219408.2, ENSMUST00000219765.2, ENSMUST00000220346.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAAAGCATGCCGTACTGGTGGGGAATGCCCGCTACAGAAGAAGCTaGAAACATTTGGTGCACGGTGTATCTGTAAGATCTCGGTGTGAC | + |
|
Preference number: 1 (lower is better) Translates to: RKHAVLVGNARYRRS*KHLVHGVSVRSRCD Trigger: GTCACACCGAGATCTTACAGATACACCGTGCACCAAATGTTTGCAGCTTCTTCTGTAGCGGGCATTCCCCACCAGTACGGCATGCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGAAGACCAGGCTTCAGAGCCAGCTAGCTCTGCAGTTGAAATGCCTCACAAACAAGCACAAGTCATCATaGTCTATCTTTTCAAACTCC | + |
|
Preference number: 2 (lower is better) Translates to: WKTRLQSQLALQLKCLTNKHKSS*SIFSNS Trigger: GGAGTTTGAAAAGATAGACCATGATGACTTGTGCTT...GTTTGTGAGGCATTTCAACTGCAGAGCTAGCTGGCTCTGAAGCCTGGTCTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| 3UTR GCA 72 bp | GCCGTACTGGTGGGGAATGCCCGCTACAGAAGAAGCTaGAAACATTTGGTGCACGGTGTATCTGTAAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: AVLVGNARYRRS*KHLVHGVSVRS Trigger: AGATCTTACAGATACACCGTGCACCAAATGTTTGCAGCTTCTTCTGTAGCGGGCATTCCCCACCAGTACGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| 3UTR TCA 72 bp | ACATTTGGTGCACGGTGTATCTGTAAGATCTCGGTGTaGCTTCTCAATTTTGCTGTGAAACTGAAATTACTC | + |
|
Preference number: 3 (lower is better) Translates to: TFGARCICKISV*LLNFAVKLKLL Trigger: GAGTAATTTCAGTTTCACAGCAAAATTGAGAAGTCACACCGAGATCTTACAGATACACCGTGCACCAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR GCA 90 bp | GAAGACCAGGCTTCAGAGCCAGCTAGCTCTGCAGTTGAAATGCCTCACAAACAGACGTTCCTCAGCTGCTaGTGTCATTTCCGACCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EDQASEPASSAVEMPHKQTFLSC*CHFRPK Trigger: CTTCGGTCGGAAATGACAGCAGCAGCTGAGGAACGT...CTGTTTGTGAGGCATTTCAACTGCAGAGCTAGCTGGCTCTGAAGCCTGGTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGACCAGGCTTCAGAGCCAGCTAGCTCTGCAGTTGAAATGCCTCACAAACTTTGTTGGTGGGAACTaGAGCAGGAGACTGCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: WKTRLQSQLALQLKCLTNFVGGN*SRRLLK Trigger: CTTAAGCAGTCTCCTGCTCCAGTTCCCACCAACAAA...GTTTGTGAGGCATTTCAACTGCAGAGCTAGCTGGCTCTGAAGCCTGGTCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGACCAGGCTTCAGAGCCAGCTAGCTCTGCAGTTGAAATGCCTCACAAACTGGTTGTTGGAGCTCTaGAGTTTGCTTCTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WKTRLQSQLALQLKCLTNWLLEL*SLLLSE Trigger: CTCAGAAAGAAGCAAACTCCAGAGCTCCAACAACCA...GTTTGTGAGGCATTTCAACTGCAGAGCTAGCTGGCTCTGAAGCCTGGTCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGACCAGGCTTCAGAGCCAGCTAGCTCTGCAGTTGAAATGCCTCACAAACTCTTTCAAGGCTAGTTaGCTCTTTAGCCTGTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: WKTRLQSQLALQLKCLTNSFKAS*LFSLST Trigger: TGTAGACAGGCTAAAGAGCCAACTAGCCTTGAAAGA...GTTTGTGAGGCATTTCAACTGCAGAGCTAGCTGGCTCTGAAGCCTGGTCTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGCAGTAGAGTATTCACCCATGCTGGACCTGAATCCCAGTTAATGCTTAAATTTACCTCACTGGCATaGGTTTCTTGGAGCCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSRVFTHAGPESQLMLKFTSLA*VSWSRS Trigger: ACTACGGCTCCAAGAAACTCATGCCAGTGAGGTAAA...TTTAAGCATTAACTGGGATTCAGGTCCAGCATGGGTGAATACTCTACTGCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR GCA 90 bp | AAAATAATTTATTGGAAGACCAGGCTTCAGAGCCAGCTAGCTCTGCAGTTGAAATATACGTTCCTCAGCTaGTGCTGTCATTTCCGACCG | + |
|
Preference number: 4 (lower is better) Translates to: KIIYWKTRLQSQLALQLKYTFLS*CCHFRP Trigger: CGGTCGGAAATGACAGCAGCAGCTGAGGAACGTATA...TTTCAACTGCAGAGCTAGCTGGCTCTGAAGCCTGGTCTTCCAATAAATTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGCAGTAGAGTATTCACCCATGCTGGACCTGAATCCCAGTTAATGCTTAAATCAGACTTTAAACTCTaGGAGTCCTTGTGTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSRVFTHAGPESQLMLKSDFKL*ESLCAW Trigger: CCAAGCACACAAGGACTCCCAGAGTTTAAAGTCTGA...TTTAAGCATTAACTGGGATTCAGGTCCAGCATGGGTGAATACTCTACTGCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR CCA 90 bp | AATTCTGAGGGTTGGAGGTTTAGCTCAGCAGTAGAGTATTCACCCATGCTGGACACATTAATACACATCTaGTGCTCACCTTTAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSEGWRFSSAVEYSPMLDTLIHI*CSPLAL Trigger: GAGAGCTAAAGGTGAGCACCAGATGTGTATTAATGT...GTCCAGCATGGGTGAATACTCTACTGCTGAGCTAAACCTCCAACCCTCAGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR GCA 90 bp | TTAGTAAGCACAAGTCATCATGGTCTATCTTTTCAAACTCCGCAAGATGATAGTTGTTCTGCTACTGTCTaGTCCATCTCGGCCAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: LVSTSHHGLSFQTPQDDSCSATV*SISARR Trigger: TCGTCTGGCCGAGATGGAGCAGACAGTAGCAGAACA...ACTATCATCTTGCGGAGTTTGAAAAGATAGACCATGATGACTTGTGCTTACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR TCA 90 bp | AGTAGAGTATTCACCCATGCTGGACCTGAATCCCAGTTAATGCTTAAAATTTACTCTCGGCCAGACGAATaGAATGTTTGTTGGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRVFTHAGPESQLMLKIYSRPDE*NVCWWE Trigger: TTCCCACCAACAAACATTTCATTCGTCTGGCCGAGA...GTAAATTTTAAGCATTAACTGGGATTCAGGTCCAGCATGGGTGAATACTCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGCAGTAGAGTATTCACCCATGCTGGACCTGAATCCCAGTTAATGCTTAAACTAAGTGCCTTTTGTTaGTTCTCTTTCAAGGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSRVFTHAGPESQLMLKLSAFC*FSFKAS Trigger: ACTAGCCTTGAAAGAGAAGCAACAAAAGGCACTTAG...TTTAAGCATTAACTGGGATTCAGGTCCAGCATGGGTGAATACTCTACTGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR GCA 90 bp | AAAATAATTTATTGGAAGACCAGGCTTCAGAGCCAGCTAGCTCTGCAGTTGAAACAGGGCTCGACTAAGTaGCTTTTGTTGCTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KIIYWKTRLQSQLALQLKQGSTK*LLLLLF Trigger: AAAGAGAAGCAACAAAAGGCACTTAGTCGAGCCCTG...TTTCAACTGCAGAGCTAGCTGGCTCTGAAGCCTGGTCTTCCAATAAATTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR GCA 90 bp | CAAACTCCGCAAGATGATAGTCCATACGTGAATAACATAAAGATACATAGTGTTTGGAGCTCTGGAGTTTaGTTCTTTCTGAGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTPQDDSPYVNNIKIHSVWSSGV*FFLSLE Trigger: CTCCAGGCTCAGAAAGAAGCAAACTCCAGAGCTCCA...AACACTATGTATCTTTATGTTATTCACGTATGGACTATCATCTTGCGGAGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR CCA 90 bp | TTAGTAAGCACAAGTCATCATGGTCTATCTTTTCAAACTCCGCAAGATGATAGTCTTTCTTTACCTCACTaGCATGAGTTTCTTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSTSHHGLSFQTPQDDSLSLPH*HEFLGA Trigger: GGCTCCAAGAAACTCATGCCAGTGAGGTAAAGAAAG...ACTATCATCTTGCGGAGTTTGAAAAGATAGACCATGATGACTTGTGCTTACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTCCGCAAGATGATAGTCCATACGTGAATAACATAAAGATACATAGTGTTCAAGATTCCTCATTGTaGTTGTTGGAGCTCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTPQDDSPYVNNIKIHSVQDSSL*LLELWS Trigger: ACTCCAGAGCTCCAACAACCACAATGAGGAATCTTG...AACACTATGTATCTTTATGTTATTCACGTATGGACTATCATCTTGCGGAGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR TCA 90 bp | TTAGTAAGCACAAGTCATCATGGTCTATCTTTTCAAACTCCGCAAGATGATAGTCAACTTGTTGAACATTaGGATTTGCCTCTTTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVSTSHHGLSFQTPQDDSQLVEH*DLPLFE Trigger: CTCAAAAAGAGGCAAATCTCAATGTTCAACAAGTTG...ACTATCATCTTGCGGAGTTTGAAAAGATAGACCATGATGACTTGTGCTTACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS GCA 90 bp | GCAATTAGAGCCTTTTCGTCAGATTGTGCCTGGAAGTCCAGCAGCTaGGTTCTGAGGGATTCCACTTCCTTTTCCCTGGACTGTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: AIRAFSSDCAWKSSS*VLRDSTSFSLDCCC Trigger: GCAACAACAGTCCAGGGAAAAGGAAGTGGAATCCCTCAGAACGCAGCTGCTGGACTTCCAGGCACAATCTGACGAAAAGGCTCTAATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 90 bp | ACTGAACTGTCTTCGAAGCGACTGAATGGTTTGGCGCAGGTGTTTTaGTCTGTTTCTACCTTCCAAACGAGCATAGTAGAGCGCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TELSSKRLNGLAQVF*SVSTFQTSIVERLL Trigger: GAGCAGGCGCTCTACTATGCTCGTTTGGAAGGTAGAAACAGAGCAAAACACCTGCGCCAAACCATTCAGTCGCTTCGAAGACAGTTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS-3UTR CAA 90 bp | GAAGACCAGGCTTCAGAGCCAGCTAGCTCTGCAGTTGAAATGCCTCACAAACAGTCCTCATTGTGGTTGTaGGAGCTCTGGAGTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: EDQASEPASSAVEMPHKQSSLWL*ELWSLL Trigger: AAGCAAACTCCAGAGCTCCAACAACCACAATGAGGA...CTGTTTGTGAGGCATTTCAACTGCAGAGCTAGCTGGCTCTGAAGCCTGGTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS TCA 90 bp | TGCTGTGCTAAGGGTAGAGCTCCACTGAACTGTCTTCGAAGCGACTaGATGGTTTGGCGCAGGTGTTTTGCTCTGTTTCTACCTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: CCAKGRAPLNCLRSD*MVWRRCFALFLPSK Trigger: TTTGGAAGGTAGAAACAGAGCAAAACACCTGCGCCAAACCATTCAGTCGCTTCGAAGACAGTTCAGTGGAGCTCTACCCTTAGCACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 90 bp | TGCCTCTTTTTGAGAAGTTACAGCGATTATACGTTCCTCAGCTGCTaGTGTCATTTCCGACCGAAGTTCCAACAGGGCTCGACTAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLFLRSYSDYTFLSC*CHFRPKFQQGSTKC Trigger: GCACTTAGTCGAGCCCTGTTGGAACTTCGGTCGGAAATGACAGCAGCAGCTGAGGAACGTATAATCGCTGTAACTTCTCAAAAAGAGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 90 bp | TCTCTAGTTCTAGAATCCGCTGTCGGTCAGCATCACTTACTGCCTTaGTCACACTATCAGCTAATTCGTCTCTCAACATCTGCTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SLVLESAVGQHHLLP*SHYQLIRLSTSAPP Trigger: AGGTGGAGCAGATGTTGAGAGACGAATTAGCTGATAGTGTGACCAAGGCAGTAAGTGATGCTGACCGACAGCGGATTCTAGAACTAGAGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 90 bp | TTGGCAAAAAGTTCCTTTAAGGTATTCAGCTGCTTTGCCAGGCCGTaGGCTTCTCCTTCCTTCTCCTTTAGTCTGTTTCGTAGTCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LAKSSFKVFSCFARP*ASPSFSFSLFRSPS Trigger: AGAGGGACTACGAAACAGACTAAAGGAGAAGGAAGGAGAAGCCCACGGCCTGGCAAAGCAGCTGAATACCTTAAAGGAACTTTTTGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAGACCAGGCTTCAGAGCCAGCTAGCTCTGCAGTTGAAATGCCTCACAAACTCTTGGAGCCGTAGTTaGGTATTTTCAAACTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WKTRLQSQLALQLKCLTNSWSRS*VFSNSL Trigger: CAGAGAGTTTGAAAATACCAAACTACGGCTCCAAGA...GTTTGTGAGGCATTTCAACTGCAGAGCTAGCTGGCTCTGAAGCCTGGTCTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR CAA 90 bp | AATTCTGAGGGTTGGAGGTTTAGCTCAGCAGTAGAGTATTCACCCATGCTGGACGATTCCTCATTGTGGTaGTTGGAGCTCTGGAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NSEGWRFSSAVEYSPMLDDSSLW*LELWSL Trigger: CAAACTCCAGAGCTCCAACAACCACAATGAGGAATC...GTCCAGCATGGGTGAATACTCTACTGCTGAGCTAAACCTCCAACCCTCAGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS GCA 90 bp | TTGGTCAAAAGTGAGGACAGAGAGTCATCTTGTTCTGCTACTGTCTaGTCCATCTCGGCCAGACGAATGAAATGTTTGTTGGTGGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: LVKSEDRESSCSATV*SISARRMKCLLVGT Trigger: AGTTCCCACCAACAAACATTTCATTCGTCTGGCCGAGATGGAGCAGACAGTAGCAGAACAAGATGACTCTCTGTCCTCACTTTTGACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 90 bp | ATTTGCCTCTTTTTGAGAAGTTACAGCGATTATACGTTCCTCAGCTaGTGCTGTCATTTCCGACCGAAGTTCCAACAGGGCTCGACTAAG | + |
|
Preference number: 5 (lower is better) Translates to: ICLFLRSYSDYTFLS*CCHFRPKFQQGSTK Trigger: CTTAGTCGAGCCCTGTTGGAACTTCGGTCGGAAATGACAGCAGCAGCTGAGGAACGTATAATCGCTGTAACTTCTCAAAAAGAGGCAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 90 bp | ATGGTGCTATCCCATCGGGTAAGTCTATGCCTTTGTATACTACATTaGAGCCTGCAGACTGACGTAGAAGGTCAGTTTCCTTCTCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: MVLSHRVSLCLCILH*SLQTDVEGQFPSQG Trigger: ACCTTGAGAAGGAAACTGACCTTCTACGTCAGTCTGCAGGCTCCAATGTAGTATACAAAGGCATAGACTTACCCGATGGGATAGCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 90 bp | TCAAGGCTAGTTGGCTCTTTAGCCTGTCTACAAGATTCCTCATTGTaGTTGTTGGAGCTCTGGAGTTTGCTTCTTTCTGAGCCTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SRLVGSLACLQDSSL*LLELWSLLLSEPGV Trigger: AACTCCAGGCTCAGAAAGAAGCAAACTCCAGAGCTCCAACAACCACAATGAGGAATCTTGTAGACAGGCTAAAGAGCCAACTAGCCTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 90 bp | GCTCTACTTTCTGCAAACTGTAGTCTCTTCCCAGTTTCTTCGAGTTaGGCTGCCATCTTGTCGTTCACCAGCTCTAAGTTGTTCTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALLSANCSLFPVSSS*AAILSFTSSKLFLA Trigger: AGCTAAGAACAACTTAGAGCTGGTGAACGACAAGATGGCAGCTCAACTCGAAGAAACTGGGAAGAGACTACAGTTTGCAGAAAGTAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGCAGTAGAGTATTCACCCATGCTGGACCTGAATCCCAGTTAATGCTTAAACGAATGAAATGTTTGTaGGTGGGAACTGGAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSSRVFTHAGPESQLMLKRMKCL*VGTGAG Trigger: TCCTGCTCCAGTTCCCACCAACAAACATTTCATTCG...TTTAAGCATTAACTGGGATTCAGGTCCAGCATGGGTGAATACTCTACTGCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR CAA 90 bp | GAAGACCAGGCTTCAGAGCCAGCTAGCTCTGCAGTTGAAATGCCTCACAAACAGGATACTTTCTTTAGTTaGGTCAAAAGTGAGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: EDQASEPASSAVEMPHKQDTFFS*VKSEDR Trigger: TCTGTCCTCACTTTTGACCAAACTAAAGAAAGTATC...CTGTTTGTGAGGCATTTCAACTGCAGAGCTAGCTGGCTCTGAAGCCTGGTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGCAGTAGAGTATTCACCCATGCTGGACCTGAATCCCAGTTAATGCTTAAACTACAAGATTCCTCATaGTGGTTGTTGGAGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSSRVFTHAGPESQLMLKLQDSS*WLLELW Trigger: CCAGAGCTCCAACAACCACAATGAGGAATCTTGTAG...TTTAAGCATTAACTGGGATTCAGGTCCAGCATGGGTGAATACTCTACTGCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS TCA 90 bp | GACGTAACTGACTCTAACTTACCGAGGGCAGTGGCCTCACTAATTTaGAGAGAGACAACATGTTGGTGCAATTTGGCAATTAGAGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DVTDSNLPRAVASLI*RETTCWCNLAIRAF Trigger: AAAGGCTCTAATTGCCAAATTGCACCAACATGTTGTCTCTCTTCAAATTAGTGAGGCCACTGCCCTCGGTAAGTTAGAGTCAGTTACGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 90 bp | AGCAATTTCAAGTTGGTTTGGAAGAGGCAAGCTGGGGTCTGGCATTaGTCCTGTAGAGTCTTCAAACTTTTGTGCTGCACTGAGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SNFKLVWKRQAGVWH*SCRVFKLLCCTEYF Trigger: GAAATACTCAGTGCAGCACAAAAGTTTGAAGACTCTACAGGATCAATGCCAGACCCCAGCTTGCCTCTTCCAAACCAACTTGAAATTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 90 bp | CTTACTGCCTTGGTCACACTATCAGCTAATTCGTCTCTCAACATCTaGTCCACCTTTTGTGCATCCAGGTTGATTTTAGTAAGCTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTALVTLSANSSLNI*STFCASRLILVSSV Trigger: CACTGAGCTTACTAAAATCAACCTGGATGCACAAAAGGTGGAGCAGATGTTGAGAGACGAATTAGCTGATAGTGTGACCAAGGCAGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 90 bp | GCCTTCTCCAGAAGGTGCTGGTATTTCTTCAATACTTCTTCCTTGTaGTTTAACCTTGCCTGCATGTTGGCAATAGTTTGGTGGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: AFSRRCWYFFNTSSL*FNLACMLAIVWWAI Trigger: AATTGCCCACCAAACTATTGCCAACATGCAGGCAAGGTTAAATCACAAGGAAGAAGTATTGAAGAAATACCAGCACCTTCTGGAGAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 90 bp | CATGCCTTAAGTCCTCTACCTCTGCTTTCACTTTCTTTACCTCACTaGCATGAGTTTCTTGGAGCCGTAGTTTGGTATTTTCAAACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HALSPLPLLSLSLPH*HEFLGAVVWYFQTL Trigger: GAGAGTTTGAAAATACCAAACTACGGCTCCAAGAAACTCATGCCAGTGAGGTAAAGAAAGTGAAAGCAGAGGTAGAGGACTTAAGGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 90 bp | TCTTTAGCCTGTCTACAAGATTCCTCATTGTGGTTGTTGGAGCTCTaGAGTTTGCTTCTTTCTGAGCCTGGAGTTCAGACTTTAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLACLQDSSLWLLEL*SLLLSEPGVQTLNS Trigger: AGAGTTTAAAGTCTGAACTCCAGGCTCAGAAAGAAGCAAACTCCAGAGCTCCAACAACCACAATGAGGAATCTTGTAGACAGGCTAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 90 bp | CTGAGAGCATTTTCTTCATCTCGTTCGAATCCATCTGAAGAGCACTaGGCAAATTGTTGTACTCTTTTACTTTCACAGCATCCTGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRAFSSSRSNPSEEH*ANCCTLLLSQHPAQ Trigger: CTGAGCAGGATGCTGTGAAAGTAAAAGAGTACAACAATTTGCTCAGTGCTCTTCAGATGGATTCGAACGAGATGAAGAAAATGCTCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 90 bp | TCATTTCCTAACTTCGTTTCTTGTTCCCAGGCCTGTTCAATGGTATaGAGTTTTTCCTTTGTAATCTCCAGCTCTTTACTGATAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFPNFVSCSQACSMV*SFSFVISSSLLIAS Trigger: GGAGGCTATCAGTAAAGAGCTGGAGATTACAAAGGAAAAACTCCATACCATTGAACAGGCCTGGGAACAAGAAACGAAGTTAGGAAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS-3UTR CAA 90 bp | AAAATAATTTATTGGAAGACCAGGCTTCAGAGCCAGCTAGCTCTGCAGTTGAAAGCGCTCAACAACTTGTaGAACATTGAGATTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KIIYWKTRLQSQLALQLKALNNL*NIEICL Trigger: GAGGCAAATCTCAATGTTCAACAAGTTGTTGAGCGC...TTTCAACTGCAGAGCTAGCTGGCTCTGAAGCCTGGTCTTCCAATAAATTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS TCA 90 bp | AACTTTCTGAGTTGTGTCTCCAGGTCATTTATCTTTTCCTTTAGTTaGTCAGAATCAGGTATGCTACTGTCAGCTCTGGTTTGGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NFLSCVSRSFIFSFS*SESGMLLSALVWSL Trigger: CAAGGACCAAACCAGAGCTGACAGTAGCATACCTGATTCTGATCAACTAAAGGAAAAGATAAATGACCTGGAGACACAACTCAGAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS-3UTR CAA 90 bp | CAAACTCCGCAAGATGATAGTCCATACGTGAATAACATAAAGATACATAGTGTTGGACAGAGAGTCATCTaGTTCTGCTACTGTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QTPQDDSPYVNNIKIHSVGQRVI*FCYCLL Trigger: GAGCAGACAGTAGCAGAACAAGATGACTCTCTGTCC...AACACTATGTATCTTTATGTTATTCACGTATGGACTATCATCTTGCGGAGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS GCA 90 bp | ATAAGTTCAAGTCGTCAATGGTTAATCCTGAGGCTGCGTTCCTTTTaGCTCTTTCTTGAGCCATTTGACGAATCTTTCTTTTCAAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ISSSRQWLILRLRSF*LFLEPFDESFFSSQ Trigger: TTGACTTGAAAAGAAAGATTCGTCAAATGGCTCAAGAAAGAGGCAAAAGGAACGCAGCCTCAGGATTAACCATTGACGACTTGAACTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 90 bp | TGTAAATGTAAGTCTTCCACAACAGAATCTCGTGGAAGAGCCTGCTaGGTCCTCATGTATAATATGTCATTTTCTAGGTCCAGATTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CKCKSSTTESRGRAC*VLMYNMSFSRSRFF Trigger: GAAAAATCTGGACCTAGAAAATGACATATTATACATGAGGACCCAGCAGGCTCTTCCACGAGATTCTGTTGTGGAAGACTTACATTTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 90 bp | CTCTCTGTTGCTTCTCTTACAAGCTGTTTAAGGTCAGTGATACTTTaGTTCTTTTTGGCAATGTCACTTTCAAGCTCTTTCATCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSVASLTSCLRSVIL*FFLAMSLSSSFILV Trigger: GACCAAGATGAAAGAGCTTGAAAGTGACATTGCCAAAAAGAATCAAAGTATCACTGACCTTAAACAGCTTGTAAGAGAAGCAACAGAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 90 bp | TTTTGTAAATGTAAGTCTTCCACAACAGAATCTCGTGGAAGAGCCTaGTGGGTCCTCATGTATAATATGTCATTTTCTAGGTCCAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: FCKCKSSTTESRGRA*WVLMYNMSFSRSRF Trigger: AAATCTGGACCTAGAAAATGACATATTATACATGAGGACCCAGCAGGCTCTTCCACGAGATTCTGTTGTGGAAGACTTACATTTACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTAAGCACAAGTCATCATGGTCTATCTTTTCAAACTCCGCAAGATGATAGTATGGCGCTCAACAACTaGTTGAACATTGAGATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVSTSHHGLSFQTPQDDSMALNN*LNIEIC Trigger: GCAAATCTCAATGTTCAACAAGTTGTTGAGCGCCAT...ACTATCATCTTGCGGAGTTTGAAAAGATAGACCATGATGACTTGTGCTTACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS-3UTR CAA 90 bp | AGTAGAGTATTCACCCATGCTGGACCTGAATCCCAGTTAATGCTTAAAATTTACGAGATTTGCCTCTTTTaGAGAAGTTACAGCGATTAT | + |
|
Preference number: 5 (lower is better) Translates to: SRVFTHAGPESQLMLKIYEICLF*RSYSDY Trigger: ATAATCGCTGTAACTTCTCAAAAAGAGGCAAATCTC...GTAAATTTTAAGCATTAACTGGGATTCAGGTCCAGCATGGGTGAATACTCTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS GCA 90 bp | AGTTCATCGATTAAACTTTGCTTGTTATCTATCAAAGTTTTGCTCTaGAGTCCACTGGACAGTCTTTTAATCTGTCTTCTCAGTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSIKLCLLSIKVLL*SPLDSLLICLLSSS Trigger: TGATGAACTGAGAAGACAGATTAAAAGACTGTCCAGTGGACTGCAGAGCAAAACTTTGATAGATAACAAGCAAAGTTTAATCGATGAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS-3UTR CAA 90 bp | CAAACTCCGCAAGATGATAGTCCATACGTGAATAACATAAAGATACATAGTGTTGTCTGTCTGAATTTATaGAGTGAATTATCGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QTPQDDSPYVNNIKIHSVVCLNL*SELSAC Trigger: ACAGGCCGATAATTCACTCAATAAATTCAGACAGAC...AACACTATGTATCTTTATGTTATTCACGTATGGACTATCATCTTGCGGAGTTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219408.2 |
||
| CDS CCA 90 bp | ATTTCTTCTTTACCCTTGACTAGTTCTCTATTTAGCTTAAGTTCTTaGAGGCGAAGTTCTTCTATTTTCACATGCCAATTGATTACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISSLPLTSSLFSLSS*RRSSSIFTCQLITF Trigger: GAAGGTAATCAATTGGCATGTGAAAATAGAAGAACTTCGCCTCCAAGAACTTAAGCTAAATAGAGAACTAGTCAAGGGTAAAGAAGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 72 bp | GCCTTTTCGTCAGATTGTGCCTGGAAGTCCAGCAGCTaGGTTCTGAGGGATTCCACTTCCTTTTCCCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: AFSSDCAWKSSS*VLRDSTSFSLD Trigger: GTCCAGGGAAAAGGAAGTGGAATCCCTCAGAACGCAGCTGCTGGACTTCCAGGCACAATCTGACGAAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | CGTCAGATTGTGCCTGGAAGTCCAGCAGCTGCGTTCTaGGGGATTCCACTTCCTTTTCCCTGGACTGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RQIVPGSPAAAF*GIPLPFPWTVV Trigger: AACAACAGTCCAGGGAAAAGGAAGTGGAATCCCTCAGAACGCAGCTGCTGGACTTCCAGGCACAATCTGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | GGGATTGTCTTCCCACTTCTACCAGCCCCTCTGACCTaGCCAAGCTTCCGCTCAAGTTCCAGTTTTCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GIVFPLLPAPLT*PSFRSSSSFPF Trigger: GAAAGGAAAACTGGAACTTGAGCGGAAGCTTGGTCAGGTCAGAGGGGCTGGTAGAAGTGGGAAGACAATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | GATCGTCCTCTTCATCCTTCGCCTTCAGAAGATCCGTaGGCTCTCGAACTTGCAGGCGATAGTGCTCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: DRPLHPSPSEDP*ALELAGDSAHS Trigger: AGAATGAGCACTATCGCCTGCAAGTTCGAGAGCTCACGGATCTTCTGAAGGCGAAGGATGAAGAGGACGATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | AGAACTTTTCCTGCTGTGCTAAGGGTAGAGCTCCACTaGACTGTCTTCGAAGCGACTGAATGGTTTGGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: RTFPAVLRVELH*TVFEATEWFGA Trigger: TGCGCCAAACCATTCAGTCGCTTCGAAGACAGTTCAGTGGAGCTCTACCCTTAGCACAGCAGGAAAAGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 72 bp | TTGAGAAGTTACAGCGATTATACGTTCCTCAGCTGCTaGTGTCATTTCCGACCGAAGTTCCAACAGGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LRSYSDYTFLSC*CHFRPKFQQGS Trigger: CGAGCCCTGTTGGAACTTCGGTCGGAAATGACAGCAGCAGCTGAGGAACGTATAATCGCTGTAACTTCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 72 bp | TCAGCTTTGGCAAAAAGTTCCTTTAAGGTATTCAGCTaGTTTGCCAGGCCGTGGGCTTCTCCTTCCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SALAKSSFKVFS*FARPWASPSFS Trigger: GGAGAAGGAAGGAGAAGCCCACGGCCTGGCAAAGCAGCTGAATACCTTAAAGGAACTTTTTGCCAAAGCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | AAGGGTAGAGCTCCACTGAACTGTCTTCGAAGCGACTaGATGGTTTGGCGCAGGTGTTTTGCTCTGTTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: KGRAPLNCLRSD*MVWRRCFALFL Trigger: TAGAAACAGAGCAAAACACCTGCGCCAAACCATTCAGTCGCTTCGAAGACAGTTCAGTGGAGCTCTACCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 72 bp | CGAAGTTCCAACAGGGCTCGACTAAGTGCCTTTTGTTaGTTCTCTTTCAAGGCTAGTTGGCTCTTTAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSSNRARLSAFC*FSFKASWLFSL Trigger: CAGGCTAAAGAGCCAACTAGCCTTGAAAGAGAAGCAACAAAAGGCACTTAGTCGAGCCCTGTTGGAACTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 72 bp | CCACTCTTCCACTTTTGCGTTAACAGCCATCATGACTaGATCGTCCTCTTCATCCTTCGCCTTCAGAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: PLFHFCVNSHHD*IVLFILRLQKI Trigger: GATCTTCTGAAGGCGAAGGATGAAGAGGACGATCCAGTCATGATGGCTGTTAACGCAAAAGTGGAAGAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 72 bp | AATTTGGCAATTAGAGCCTTTTCGTCAGATTGTGCCTaGAAGTCCAGCAGCTGCGTTCTGAGGGATTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: NLAIRAFSSDCA*KSSSCVLRDST Trigger: AGTGGAATCCCTCAGAACGCAGCTGCTGGACTTCCAGGCACAATCTGACGAAAAGGCTCTAATTGCCAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | AGCTCCACTGAACTGTCTTCGAAGCGACTGAATGGTTaGGCGCAGGTGTTTTGCTCTGTTTCTACCTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SSTELSSKRLNG*AQVFCSVSTFQ Trigger: TTGGAAGGTAGAAACAGAGCAAAACACCTGCGCCAAACCATTCAGTCGCTTCGAAGACAGTTCAGTGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 90 bp | TTCTCTAGTTCTAGAATCCGCTGTCGGTCAGCATCACTTACTGCCTaGGTCACACTATCAGCTAATTCGTCTCTCAACATCTGCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: FSSSRIRCRSASLTA*VTLSANSSLNICST Trigger: GGTGGAGCAGATGTTGAGAGACGAATTAGCTGATAGTGTGACCAAGGCAGTAAGTGATGCTGACCGACAGCGGATTCTAGAACTAGAGAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 90 bp | AGGCTAGTTGGCTCTTTAGCCTGTCTACAAGATTCCTCATTGTGGTaGTTGGAGCTCTGGAGTTTGCTTCTTTCTGAGCCTGGAGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLVGSLACLQDSSLW*LELWSLLLSEPGVQ Trigger: CTGAACTCCAGGCTCAGAAAGAAGCAAACTCCAGAGCTCCAACAACCACAATGAGGAATCTTGTAGACAGGCTAAAGAGCCAACTAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 90 bp | AGGCCAGCCCGCTCTCTAAGGGCTTCGTTTTCATCAAGGATGTCATaGATCTTCATCTCAAGCTTATTGATCTCCTTGGTCAACACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RPARSLRASFSSRMS*IFISSLLISLVNTS Trigger: GGAAGTGTTGACCAAGGAGATCAATAAGCTTGAGATGAAGATCAATGACATCCTTGATGAAAACGAAGCCCTTAGAGAGCGGGCTGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 90 bp | GCCTGTCTACAAGATTCCTCATTGTGGTTGTTGGAGCTCTGGAGTTaGCTTCTTTCTGAGCCTGGAGTTCAGACTTTAAACTCTGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ACLQDSSLWLLELWS*LLSEPGVQTLNSGS Trigger: ACTCCCAGAGTTTAAAGTCTGAACTCCAGGCTCAGAAAGAAGCAAACTCCAGAGCTCCAACAACCACAATGAGGAATCTTGTAGACAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 90 bp | CTAGTTGGCTCTTTAGCCTGTCTACAAGATTCCTCATTGTGGTTGTaGGAGCTCTGGAGTTTGCTTCTTTCTGAGCCTGGAGTTCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: LVGSLACLQDSSLWL*ELWSLLLSEPGVQT Trigger: AGTCTGAACTCCAGGCTCAGAAAGAAGCAAACTCCAGAGCTCCAACAACCACAATGAGGAATCTTGTAGACAGGCTAAAGAGCCAACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 90 bp | CTTTCAAGGCTAGTTGGCTCTTTAGCCTGTCTACAAGATTCCTCATaGTGGTTGTTGGAGCTCTGGAGTTTGCTTCTTTCTGAGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSRLVGSLACLQDSS*WLLELWSLLLSEPG Trigger: TCCAGGCTCAGAAAGAAGCAAACTCCAGAGCTCCAACAACCACAATGAGGAATCTTGTAGACAGGCTAAAGAGCCAACTAGCCTTGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | TTCTCCTTCTTGATCTGGTCCATGACAGCATCCGACTaGTGCACAAGCGCTTTCATCCTGTTGTACTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: FSFLIWSMTASD*CTSAFILLYSS Trigger: TGATGAGTACAACAGGATGAAAGCGCTTGTGCATCAGTCGGATGCTGTCATGGACCAGATCAAGAAGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | AAGTTGGTTTGGAAGAGGCAAGCTGGGGTCTGGCATTaGTCCTGTAGAGTCTTCAAACTTTTGTGCTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: KLVWKRQAGVWH*SCRVFKLLCCT Trigger: AGTGCAGCACAAAAGTTTGAAGACTCTACAGGATCAATGCCAGACCCCAGCTTGCCTCTTCCAAACCAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | TCTGCAAACTGTAGTCTCTTCCCAGTTTCTTCGAGTTaGGCTGCCATCTTGTCGTTCACCAGCTCTAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SANCSLFPVSSS*AAILSFTSSKL Trigger: CAACTTAGAGCTGGTGAACGACAAGATGGCAGCTCAACTCGAAGAAACTGGGAAGAGACTACAGTTTGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 72 bp | TCTTCGAAGCGACTGAATGGTTTGGCGCAGGTGTTTTaGTCTGTTTCTACCTTCCAAACGAGCATAGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSKRLNGLAQVF*SVSTFQTSIVE Trigger: CTCTACTATGCTCGTTTGGAAGGTAGAAACAGAGCAAAACACCTGCGCCAAACCATTCAGTCGCTTCGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 72 bp | AGTGAGGACAGAGAGTCATCTTGTTCTGCTACTGTCTaGTCCATCTCGGCCAGACGAATGAAATGTTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SEDRESSCSATV*SISARRMKCLL Trigger: CAACAAACATTTCATTCGTCTGGCCGAGATGGAGCAGACAGTAGCAGAACAAGATGACTCTCTGTCCTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 72 bp | TTTTTGAGAAGTTACAGCGATTATACGTTCCTCAGCTaGTGCTGTCATTTCCGACCGAAGTTCCAACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: FLRSYSDYTFLS*CCHFRPKFQQG Trigger: GCCCTGTTGGAACTTCGGTCGGAAATGACAGCAGCAGCTGAGGAACGTATAATCGCTGTAACTTCTCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 72 bp | TCCCATCGGGTAAGTCTATGCCTTTGTATACTACATTaGAGCCTGCAGACTGACGTAGAAGGTCAGTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SHRVSLCLCILH*SLQTDVEGQFP Trigger: AGGAAACTGACCTTCTACGTCAGTCTGCAGGCTCCAATGTAGTATACAAAGGCATAGACTTACCCGATGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 72 bp | CTAGAATCCGCTGTCGGTCAGCATCACTTACTGCCTTaGTCACACTATCAGCTAATTCGTCTCTCAACATCT | + |
|
Preference number: 6 (lower is better) Translates to: LESAVGQHHLLP*SHYQLIRLSTS Trigger: AGATGTTGAGAGACGAATTAGCTGATAGTGTGACCAAGGCAGTAAGTGATGCTGACCGACAGCGGATTCTAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | TCTAGAATCCGCTGTCGGTCAGCATCACTTACTGCCTaGGTCACACTATCAGCTAATTCGTCTCTCAACATC | + |
|
Preference number: 6 (lower is better) Translates to: SRIRCRSASLTA*VTLSANSSLNI Trigger: GATGTTGAGAGACGAATTAGCTGATAGTGTGACCAAGGCAGTAAGTGATGCTGACCGACAGCGGATTCTAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | GTCTTCGAAGCGACTGAATGGTTTGGCGCAGGTGTTTaGCTCTGTTTCTACCTTCCAAACGAGCATAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: VFEATEWFGAGV*LCFYLPNEHSR Trigger: TCTACTATGCTCGTTTGGAAGGTAGAAACAGAGCAAAACACCTGCGCCAAACCATTCAGTCGCTTCGAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | CTTTCATCTTGGTCTCATACACTCTTGAGACCACAATaGACTTCCAGCTCTTGCTGTCAGCACCTTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSSWSHTLLRPQ*TSSSCCQHLPA Trigger: AGCTGGAAGGTGCTGACAGCAAGAGCTGGAAGTCAATTGTGGTCTCAAGAGTGTATGAGACCAAGATGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 90 bp | TGGCAATGTCACTTTCAAGCTCTTTCATCTTGGTCTCATACACTCTaGAGACCACAATTGACTTCCAGCTCTTGCTGTCAGCACCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WQCHFQALSSWSHTL*RPQLTSSSCCQHLP Trigger: TGGAAGGTGCTGACAGCAAGAGCTGGAAGTCAATTGTGGTCTCAAGAGTGTATGAGACCAAGATGAAAGAGCTTGAAAGTGACATTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | TCTATGCCTTTGTATACTACATTGGAGCCTGCAGACTaGCGTAGAAGGTCAGTTTCCTTCTCAAGGTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SMPLYTTLEPAD*RRRSVSFSRWS Trigger: TGACCACCTTGAGAAGGAAACTGACCTTCTACGTCAGTCTGCAGGCTCCAATGTAGTATACAAAGGCATAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | GCTCTTGCTCTGTCTCGGCACCTTCAGGAACATTTTTaGGGATCTCAATCTGTTGTTCAAGGTCTTCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ALALSRHLQEHF*GSQSVVQGLQC Trigger: ACACTGAAGACCTTGAACAACAGATTGAGATCCTCAAAAATGTTCCTGAAGGTGCCGAGACAGAGCAAGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | TTGCTGTTTCTAAATTCAGTCAAATCAATCATTGTCTaGGGTTCAAGGCCAGCCCGCTCTCTAAGGGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LLFLNSVKSIIV*GSRPARSLRAS Trigger: CGAAGCCCTTAGAGAGCGGGCTGGCCTTGAACCCAAGACAATGATTGATTTGACTGAATTTAGAAACAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | TCTTTAGCCTGTCTACAAGATTCCTCATTGTGGTTGTaGGAGCTCTGGAGTTTGCTTCTTTCTGAGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SLACLQDSSLWL*ELWSLLLSEPG Trigger: TCCAGGCTCAGAAAGAAGCAAACTCCAGAGCTCCAACAACCACAATGAGGAATCTTGTAGACAGGCTAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | AGCTCTTGCTCTGTCTCGGCACCTTCAGGAACATTTTaGAGGATCTCAATCTGTTGTTCAAGGTCTTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSCSVSAPSGTF*RISICCSRSSV Trigger: CACTGAAGACCTTGAACAACAGATTGAGATCCTCAAAAATGTTCCTGAAGGTGCCGAGACAGAGCAAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | ATGCAAGCTGGCATCGAAGATTCCTTCTGCATTCTTTaGTTCCATAGCGTTAACCAGTCTTTCAAGACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: MQAGIEDSFCIL*FHSVNQSFKTR Trigger: CCGAGTCTTGAAAGACTGGTTAACGCTATGGAATCAAAGAATGCAGAAGGAATCTTCGATGCCAGCTTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | GACTCTAACTTACCGAGGGCAGTGGCCTCACTAATTTaGAGAGAGACAACATGTTGGTGCAATTTGGCAATT | + |
|
Preference number: 6 (lower is better) Translates to: DSNLPRAVASLI*RETTCWCNLAI Trigger: AATTGCCAAATTGCACCAACATGTTGTCTCTCTTCAAATTAGTGAGGCCACTGCCCTCGGTAAGTTAGAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 72 bp | GCCTTTTCAACTTCTTCCAAAGCGAGCTCTACTTCCTaGGCTTTCATCTTCATTAGAGACTGGGTAATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AFSTSSKASSTS*AFIFIRDWVIL Trigger: CAGAATTACCCAGTCTCTAATGAAGATGAAAGCCCAGGAAGTAGAGCTCGCTTTGGAAGAAGTTGAAAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 72 bp | AAGTCTTCCACAACAGAATCTCGTGGAAGAGCCTGCTaGGTCCTCATGTATAATATGTCATTTTCTAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KSSTTESRGRAC*VLMYNMSFSRS Trigger: GGACCTAGAAAATGACATATTATACATGAGGACCCAGCAGGCTCTTCCACGAGATTCTGTTGTGGAAGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | TCTTGGAGGCGAAGTTCTTCTATTTTCACATGCCAATaGATTACCTTCTGGGCTCCCCTGGCATCCTTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: SWRRSSSIFTCQ*ITFWAPLASFK Trigger: TTTAAAGGATGCCAGGGGAGCCCAGAAGGTAATCAATTGGCATGTGAAAATAGAAGAACTTCGCCTCCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | CAAGATTCCTCATTGTGGTTGTTGGAGCTCTGGAGTTaGCTTCTTTCTGAGCCTGGAGTTCAGACTTTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: QDSSLWLLELWS*LLSEPGVQTLN Trigger: GTTTAAAGTCTGAACTCCAGGCTCAGAAAGAAGCAAACTCCAGAGCTCCAACAACCACAATGAGGAATCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | AAAATGTCTAACTGGCGTTCCAGCTCAACTTCTCTTTaGTCCCAAGCCATCTGTCTTTCTTCATGGAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: KMSNWRSSSTSL*SQAICLSSWNL Trigger: CAAGTTCCATGAAGAAAGACAGATGGCTTGGGATCAAAGAGAAGTTGAGCTGGAACGCCAGTTAGACATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 72 bp | TTCCTTCCTGTAAGTTGGTCAACTTGGGCTTTTAGATaGAAGCTGGCATCGAAGATTCCTTCTGCATTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FLPVSWSTWAFR*KLASKIPSAFF Trigger: AAAGAATGCAGAAGGAATCTTCGATGCCAGCTTGCATCTAAAAGCCCAAGTTGACCAACTTACAGGAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 72 bp | TGTAAGTCTTCCACAACAGAATCTCGTGGAAGAGCCTaGTGGGTCCTCATGTATAATATGTCATTTTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: CKSSTTESRGRA*WVLMYNMSFSR Trigger: CCTAGAAAATGACATATTATACATGAGGACCCAGCAGGCTCTTCCACGAGATTCTGTTGTGGAAGACTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | CGCTCTCTAAGGGCTTCGTTTTCATCAAGGATGTCATaGATCTTCATCTCAAGCTTATTGATCTCCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RSLRASFSSRMS*IFISSLLISLV Trigger: GACCAAGGAGATCAATAAGCTTGAGATGAAGATCAATGACATCCTTGATGAAAACGAAGCCCTTAGAGAGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 90 bp | CTTCTGAAGAGCTGCAATCTTGAAGATGGCCATTTCCTTGAATCTTaGCAAACTTCCAAGTTTTTCAGTGACTTCGGCTTCCATGGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: LLKSCNLEDGHFLES*QTSKFFSDFGFHGY Trigger: ATAGCCATGGAAGCCGAAGTCACTGAAAAACTTGGAAGTTTGCAAAGATTCAAGGAAATGGCCATCTTCAAGATTGCAGCTCTTCAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 90 bp | AGTATGGCGCTCAACAACTTGTTGAACATTGAGATTTGCCTCTTTTaGAGAAGTTACAGCGATTATACGTTCCTCAGCTGCTGCTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SMALNNLLNIEICLF*RSYSDYTFLSCCCH Trigger: ATGACAGCAGCAGCTGAGGAACGTATAATCGCTGTAACTTCTCAAAAAGAGGCAAATCTCAATGTTCAACAAGTTGTTGAGCGCCATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | TATCTGAAATCTCTCTCAGCTTGGACACTTCAACTTTaGGCTCCACTTCACTCTTCTCTAGTTCTAGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: YLKSLSAWTLQL*APLHSSLVLES Trigger: GGATTCTAGAACTAGAGAAGAGTGAAGTGGAGCTCAAAGTTGAAGTGTCCAAGCTGAGAGAGATTTCAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | TCTACCTCTGCTTTCACTTTCTTTACCTCACTGGCATaGGTTTCTTGGAGCCGTAGTTTGGTATTTTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: STSAFTFFTSLA*VSWSRSLVFSN Trigger: GTTTGAAAATACCAAACTACGGCTCCAAGAAACTCATGCCAGTGAGGTAAAGAAAGTGAAAGCAGAGGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 72 bp | GATACCCTGTTTCAGAGCCATGATGTTACTTTTGTCTaGATCAAGTTGGGCATTTTTAAGTTTCCCTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: DTLFQSHDVTFV*IKLGIFKFPSQ Trigger: CTGAGAGGGAAACTTAAAAATGCCCAACTTGATGCAGACAAAAGTAACATCATGGCTCTGAAACAGGGTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 72 bp | TTGGTCACACTATCAGCTAATTCGTCTCTCAACATCTaGTCCACCTTTTGTGCATCCAGGTTGATTTTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: LVTLSANSSLNI*STFCASRLILV Trigger: TACTAAAATCAACCTGGATGCACAAAAGGTGGAGCAGATGTTGAGAGACGAATTAGCTGATAGTGTGACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 72 bp | AACTTCGTTTCTTGTTCCCAGGCCTGTTCAATGGTATaGAGTTTTTCCTTTGTAATCTCCAGCTCTTTACTG | + |
|
Preference number: 6 (lower is better) Translates to: NFVSCSQACSMV*SFSFVISSSLL Trigger: CAGTAAAGAGCTGGAGATTACAAAGGAAAAACTCCATACCATTGAACAGGCCTGGGAACAAGAAACGAAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | TCCTGGATACCCTGTTTCAGAGCCATGATGTTACTTTaGTCTGCATCAAGTTGGGCATTTTTAAGTTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SWIPCFRAMMLL*SASSWAFLSFP Trigger: AGGGAAACTTAAAAATGCCCAACTTGATGCAGACAAAAGTAACATCATGGCTCTGAAACAGGGTATCCAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 90 bp | GACGTAGAAGGTCAGTTTCCTTCTCAAGGTGGTCAATCTTTAAGTTaGCTTTTACCAACTGCTGTGAATAATTTACAGCCTCTTTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: DVEGQFPSQGGQSLS*LLPTAVNNLQPLSE Trigger: CTCGGAAAGAGGCTGTAAATTATTCACAGCAGTTGGTAAAAGCAAACTTAAAGATTGACCACCTTGAGAAGGAAACTGACCTTCTACGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | AGAAGGTGCTGGTATTTCTTCAATACTTCTTCCTTGTaGTTTAACCTTGCCTGCATGTTGGCAATAGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RRCWYFFNTSSL*FNLACMLAIVW Trigger: CCAAACTATTGCCAACATGCAGGCAAGGTTAAATCACAAGGAAGAAGTATTGAAGAAATACCAGCACCTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | CCTCCTTCGAATGTTGCTTTTCTAGCTCCAACTTTCTaGGTTGTGTCTCCAGGTCATTTATCTTTTCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: PPSNVAFLAPTF*VVSPGHLSFPL Trigger: TAAAGGAAAAGATAAATGACCTGGAGACACAACTCAGAAAGTTGGAGCTAGAAAAGCAACATTCGAAGGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | TCATCAAGGATGTCATTGATCTTCATCTCAAGCTTATaGATCTCCTTGGTCAACACTTCCATCTCTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: SSRMSLIFISSL*ISLVNTSISPS Trigger: AGATGGAGAGATGGAAGTGTTGACCAAGGAGATCAATAAGCTTGAGATGAAGATCAATGACATCCTTGATGA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | ATATCTGAAATCTCTCTCAGCTTGGACACTTCAACTTaGAGCTCCACTTCACTCTTCTCTAGTTCTAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: ISEISLSLDTST*SSTSLFSSSRI Trigger: GATTCTAGAACTAGAGAAGAGTGAAGTGGAGCTCAAAGTTGAAGTGTCCAAGCTGAGAGAGATTTCAGATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | CTCAACAACTTGTTGAACATTGAGATTTGCCTCTTTTaGAGAAGTTACAGCGATTATACGTTCCTCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LNNLLNIEICLF*RSYSDYTFLSC Trigger: GCAGCTGAGGAACGTATAATCGCTGTAACTTCTCAAAAAGAGGCAAATCTCAATGTTCAACAAGTTGTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 90 bp | AAAAGAACCTGGTTCTCAGCTCTGTACTGTTGCTGCTTTAACCGTTaGCTGTTTCTAAATTCAGTCAAATCAATCATTGTCTTGGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KRTWFSALYCCCFNR*LFLNSVKSIIVLGS Trigger: TGAACCCAAGACAATGATTGATTTGACTGAATTTAGAAACAGCAAACGGTTAAAGCAGCAACAGTACAGAGCTGAGAACCAGGTTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | TCTGAGAGCATTTTCTTCATCTCGTTCGAATCCATCTaGAGAGCACTGAGCAAATTGTTGTACTCTTTTACT | + |
|
Preference number: 6 (lower is better) Translates to: SESIFFISFESI*RALSKLLYSFT Trigger: AGTAAAAGAGTACAACAATTTGCTCAGTGCTCTTCAGATGGATTCGAACGAGATGAAGAAAATGCTCTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 72 bp | TTCAAAAGAACCTGGTTCTCAGCTCTGTACTGTTGCTaGTTTAACCGTTTGCTGTTTCTAAATTCAGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: FKRTWFSALYCC*FNRLLFLNSVK Trigger: TTTGACTGAATTTAGAAACAGCAAACGGTTAAAGCAGCAACAGTACAGAGCTGAGAACCAGGTTCTTTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 72 bp | AGTATGGCGCTCAACAACTTGTTGAACATTGAGATTTaGCTCTTTTTGAGAAGTTACAGCGATTATACGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SMALNNLLNIEI*LFLRSYSDYTF Trigger: GAACGTATAATCGCTGTAACTTCTCAAAAAGAGGCAAATCTCAATGTTCAACAAGTTGTTGAGCGCCATACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000164751.2 ENSMUST00000219408.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | GGTCAGTTTCCTTCTCAAGGTGGTCAATCTTTAAGTTaGCTTTTACCAACTGCTGTGAATAATTTACAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GQFPSQGGQSLS*LLPTAVNNLQP Trigger: AGGCTGTAAATTATTCACAGCAGTTGGTAAAAGCAAACTTAAAGATTGACCACCTTGAGAAGGAAACTGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | TTCTTTTTGGCAATGTCACTTTCAAGCTCTTTCATCTaGGTCTCATACACTCTTGAGACCACAATTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: FFLAMSLSSSFI*VSYTLETTIDF Trigger: GAAGTCAATTGTGGTCTCAAGAGTGTATGAGACCAAGATGAAAGAGCTTGAAAGTGACATTGCCAAAAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS TCA 72 bp | TTTTCTTCATCTCGTTCGAATCCATCTGAAGAGCACTaGGCAAATTGTTGTACTCTTTTACTTTCACAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FSSSRSNPSEEH*ANCCTLLLSQH Trigger: ATGCTGTGAAAGTAAAAGAGTACAACAATTTGCTCAGTGCTCTTCAGATGGATTCGAACGAGATGAAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CCA 72 bp | TTACCCTTGACTAGTTCTCTATTTAGCTTAAGTTCTTaGAGGCGAAGTTCTTCTATTTTCACATGCCAATTG | + |
|
Preference number: 6 (lower is better) Translates to: LPLTSSLFSLSS*RRSSSIFTCQL Trigger: CAATTGGCATGTGAAAATAGAAGAACTTCGCCTCCAAGAACTTAAGCTAAATAGAGAACTAGTCAAGGGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | TTCTGCAAGATGTCCCTGTACTTAGTAGTCAGCTCATaGTACTGTTTATTGGCTAGTTCTAATTCAGACAAA | + |
|
Preference number: 6 (lower is better) Translates to: FCKMSLYLVVSS*YCLLASSNSDK Trigger: TTTGTCTGAATTAGAACTAGCCAATAAACAGTACAATGAGCTGACTACTAAGTACAGGGACATCTTGCAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 72 bp | CAAAGAAACACTATTATCTATAACCTTCTGAAGAGCTaGAATCTTGAAGATGGCCATTTCCTTGAATCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QRNTIIYNLLKS*NLEDGHFLESL Trigger: CAAAGATTCAAGGAAATGGCCATCTTCAAGATTGCAGCTCTTCAGAAGGTTATAGATAATAGTGTTTCTTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS GCA 72 bp | ATTAAACTTTGCTTGTTATCTATCAAAGTTTTGCTCTaGAGTCCACTGGACAGTCTTTTAATCTGTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: IKLCLLSIKVLL*SPLDSLLICLL Trigger: GAGAAGACAGATTAAAAGACTGTCCAGTGGACTGCAGAGCAAAACTTTGATAGATAACAAGCAAAGTTTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||
| CDS CAA 72 bp | TCATCGATTAAACTTTGCTTGTTATCTATCAAAGTTTaGCTCTGCAGTCCACTGGACAGTCTTTTAATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSIKLCLLSIKV*LCSPLDSLLIC Trigger: ACAGATTAAAAGACTGTCCAGTGGACTGCAGAGCAAAACTTTGATAGATAACAAGCAAAGTTTAATCGATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164751.2 ENSMUST00000219765.2 ENSMUST00000220346.2 |
||