RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP170B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000072825

Ensembl transcript IDs: ENSMUST00000092279.7, ENSMUST00000101018.11, ENSMUST00000179041.8, ENSMUST00000220627.2, ENSMUST00000222711.2

Found 978 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTaGTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGG +
Preference number: 1 (lower is better)
Translates to: ACPCQASATDRAAGA*CSYHFLPAPSGTAG
Trigger: CCCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR CCA 90 bp CAGGGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTaGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGG +
Preference number: 1 (lower is better)
Translates to: QGLGWEACGGGGAMG*MKWFRCWLRRVWKW
Trigger: CCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR GCA 90 bp GCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGTaGTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGG +
Preference number: 1 (lower is better)
Translates to: ACGGGGAMGWMKWFR*WLRRVWKWEAPIHG
Trigger: CCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR TCA 90 bp GGGCAGCTACCCTGCTCACCTGGCAGGCCCCAGCCGCACAAATCCTaGGAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCG +
Preference number: 1 (lower is better)
Translates to: GQLPCSPGRPQPHKS*ESITSSEPVPARPP
Trigger: CGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTCTCAGGATTTGTGCGGCTGGGGCCTGCCAGGTGAGCAGGGTAGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR CCA 90 bp GTTTTCACAGAGAACCTCCTGCAGCCAGGCAGGTGGGCCGTGGGATaGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGCCCGC +
Preference number: 1 (lower is better)
Translates to: VFTENLLQPGRWAVG*MHRTHAQKKAGLAR
Trigger: GCGGGCAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGGCTGCAGGAGGTTCTCTGTGAAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 90 bp TGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGTGCTaGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCT +
Preference number: 1 (lower is better)
Translates to: CGGGGAMGWMKWFRC*LRRVWKWEAPIHGA
Trigger: AGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 90 bp GCCATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTaGAAATGGGAGGCACCCATCCATGGGGCTATGGCACATACAGGG +
Preference number: 1 (lower is better)
Translates to: AMGWMKWFRCWLRRV*KWEAPIHGAMAHTG
Trigger: CCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 90 bp TTGGGGACATGCCAAACCCATCCAGCTCCTGTGTTTGGCACTGACTaGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGC +
Preference number: 1 (lower is better)
Translates to: LGTCQTHPAPVFGTD*PQGPAPFSVWPQAS
Trigger: GCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGGTTTGGCATGTCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 90 bp GGGCAATGTGTGGGACATGCAGGCGGAGCAGCCAACAGGCTGAGCTaGCACCTCCTCCAGACAAACAGCAAGCTCTACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: GQCVGHAGGAANRLS*HLLQTNSKLYTHTH
Trigger: GTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAGGTGCCAGCTCAGCCTGTTGGCTGCTCCGCCTGCATGTCCCACACATTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR GCA 90 bp GATGAGACGGGGCCTCCCAGGCTGGGCCTGGACCTAAGCGGGGCCTaGAAGTTCCTGCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTA +
Preference number: 1 (lower is better)
Translates to: DETGPPRLGLDLSGA*KFLQGSNVLFPLKL
Trigger: TAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTGGGAGGCCCCGTCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 90 bp CAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATaGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCCTGCAG +
Preference number: 1 (lower is better)
Translates to: QVLAEEGLEMGGTHP*GYGTYRVFTENLLQ
Trigger: CTGCAGGAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 90 bp GGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATaGGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCA +
Preference number: 1 (lower is better)
Translates to: GWMKWFRCWLRRVWK*EAPIHGAMAHTGFS
Trigger: TGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR TCA 90 bp CGTAAACATCAGGTGGGCTGGGCAGAGGCACACAGGACCCGTGCATaGCTCTATCAGCTAAGTGTAAACAGGGAGACCCATGCTACCCCT +
Preference number: 1 (lower is better)
Translates to: RKHQVGWAEAHRTRA*LYQLSVNRETHATP
Trigger: AGGGGTAGCATGGGTCTCCCTGTTTACACTTAGCTGATAGAGTCATGCACGGGTCCTGTGTGCCTCTGCCCAGCCCACCTGATGTTTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR GCA 90 bp GGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTCAGGAGAGCTTaGTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGTTGTGTTGG +
Preference number: 1 (lower is better)
Translates to: GSPVSLAGMNPLRRA*WDSTQTQWVWQLCW
Trigger: CCAACACAACTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATTCATCCCAGCTAGGGACACTGGGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 90 bp CCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTaGCAGTTGTGTTGGCACCAAGGACTTAGAACCACTCGTCTGCCC +
Preference number: 1 (lower is better)
Translates to: PLRRACWDSTQTQWV*QLCWHQGLRTTRLP
Trigger: GGGCAGACGAGTGGTTCTAAGTCCTTGGTGCCAACACAACTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 90 bp GCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGTTGTGTTaGCACCAAGGACTTAGAACCACTCGTCTGCCCAGGTTGATGGAC +
Preference number: 1 (lower is better)
Translates to: ACWDSTQTQWVWQLC*HQGLRTTRLPRLMD
Trigger: GTCCATCAACCTGGGCAGACGAGTGGTTCTAAGTCCTTGGTGCCAACACAACTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 90 bp TACCACTTCCTGCCCGCACCATCTGGGACGGCAGGGGCAGGTACATaGTTTAGATCACAAAGCCAGGAGCTTCCAAATCTCTTTCTGCCA +
Preference number: 1 (lower is better)
Translates to: YHFLPAPSGTAGAGT*FRSQSQELPNLFLP
Trigger: TGGCAGAAAGAGATTTGGAAGCTCCTGGCTTTGTGATCTAAACCATGTACCTGCCCCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR CCA 90 bp ATGAATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTaGGTTTGGCAGTTGTGTTGGCACCAAGGACTTAGAACCACTCGT +
Preference number: 1 (lower is better)
Translates to: MNPLRRACWDSTQTQ*VWQLCWHQGLRTTR
Trigger: ACGAGTGGTTCTAAGTCCTTGGTGCCAACACAACTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR GCA 90 bp GTACATGGTTTAGATCACAAAGCCAGGAGCTTCCAAATCTCTTTCTaGCACTCTGGTAAAGCACTCGCCACAACCAACGGGATTGCTGGC +
Preference number: 1 (lower is better)
Translates to: VHGLDHKARSFQISF*HSGKALATTNGIAG
Trigger: GCCAGCAATCCCGTTGGTTGTGGCGAGTGCTTTACCAGAGTGGCAGAAAGAGATTTGGAAGCTCCTGGCTTTGTGATCTAAACCATGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR TCA 90 bp CAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTaGCAGGAGGTGAATATGGGGCCTCACCAGCTGGCCCTTGGCAGT +
Preference number: 1 (lower is better)
Translates to: QCTLSFKATNKNNGD*QEVNMGPHQLALGS
Trigger: ACTGCCAAGGGCCAGCTGGTGAGGCCCCATATTCACCTCCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCAGGCTGGGAGGCCTGTaGAGGTGGGGGCGCCATGGG +
Preference number: 2 (lower is better)
Translates to: CQASATDRAAGACCSYHFRLGGL*RWGRHG
Trigger: CCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGCGCGCAGAAGAAGGCTaGCCTTGCCCGCCTCACAGC +
Preference number: 2 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRRAEEG*PCPPHS
Trigger: GCTGTGAGGCGGGCAAGGCCAGCCTTCTTCTGCGCG...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGAGGAGGGTCTGGAAATaGGAGGCACCCATCCATGGG +
Preference number: 2 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWRRVWK*EAPIHG
Trigger: CCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCT...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGGCTGGCCCTTGGCAGTaGACACCCCAGGGGCTAGGC +
Preference number: 2 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGAGPWQ*TPQGLG
Trigger: GCCTAGCCCCTGGGGTGTCCACTGCCAAGGGCCAGC...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR GCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACTCACAGAGAACCTCCTaGAGCCAGGCAGGTGGGCCG +
Preference number: 2 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHSQRTS*SQAGGP
Trigger: CGGCCCACCTGCCTGGCTGCAGGAGGTTCTCTGTGA...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR GCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGGACCTAAGCGGGGCCTaGAAGTTCCTGCAAGGGAGC +
Preference number: 2 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRDLSGA*KFLQGS
Trigger: GCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTC...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCACTGCAGCCAGGCAGGTaGGCCGTGGGATGGATGCAC +
Preference number: 2 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSLQPGR*AVGWMH
Trigger: GTGCATCCATCCCACGGCCCACCTGCCTGGCTGCAG...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp GGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCGCTGGCCCTTGGCAGTaGACACCCCAGGGGCTAGGC +
Preference number: 2 (lower is better)
Translates to: GKWPPSWAVWGHAKPIQLAGPWQ*TPQGLG
Trigger: GCCTAGCCCCTGGGGTGTCCACTGCCAAGGGCCAGC...GAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGGCTGGCCCTTGGCAGTaGACACCCCAGGGGCTAGGC +
Preference number: 2 (lower is better)
Translates to: ESITSSEPVPARPPQRIGAGPWQ*TPQGLG
Trigger: GCCTAGCCCCTGGGGTGTCCACTGCCAAGGGCCAGC...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGGTGTTTGGCACTGACTaGCCCCAGGGTCCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRVFGTD*PQGPAP
Trigger: AGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACAC...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp GCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTCTCAGGAGAGCTTGCTaGGACAGTACCCAAACTCAG +
Preference number: 2 (lower is better)
Translates to: ACPCQASATDRAAGACCSLRRAC*DSTQTQ
Trigger: CTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAG...ACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR TCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACGGTTCAGGTGCTGGCTaGGGAGGGTCTGGAAATGGG +
Preference number: 2 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHGSGAG*GGSGNG
Trigger: CCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACC...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCTGCAGCCAGGCAGGTaGGCCGTGGGATGGATGCAC +
Preference number: 2 (lower is better)
Translates to: ESITSSEPVPARPPQRIGLQPGR*AVGWMH
Trigger: GTGCATCCATCCCACGGCCCACCTGCCTGGCTGCAG...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCACTGCAGCCAGGCAGGTaGGCCGTGGGATGGATGCAC +
Preference number: 2 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMALQPGR*AVGWMH
Trigger: GTGCATCCATCCCACGGCCCACCTGCCTGGCTGCAG...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGAGGAGGGTCTGGAAATaGGAGGCACCCATCCATGGG +
Preference number: 2 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQRRVWK*EAPIHG
Trigger: CCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCT...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGAGGAGGGTCTGGAAATaGGAGGCACCCATCCATGGG +
Preference number: 2 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLRRVWK*EAPIHG
Trigger: CCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCT...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGTGGCTGAGGAGGGTCTaGAAATGGGAGGCACCCATC +
Preference number: 2 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLWLRRV*KWEAPI
Trigger: GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCA...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR GCA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCAGACCTAAGCGGGGCCTaGAAGTTCCTGCAAGGGAGC +
Preference number: 2 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSDLSGA*KFLQGS
Trigger: GCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTC...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp GTCCCAGAGCACACCCATGCCAGCCTGGTCAATAAGGGACTGTCCCCATCCCACAGGTGGGCCGTGGGATaGATGCACAGGACACACGCG +
Preference number: 2 (lower is better)
Translates to: VPEHTHASLVNKGLSPSHRWAVG*MHRTHA
Trigger: CGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCT...GTGGGATGGGGACAGTCCCTTATTGACCAGGCTGGCATGGGTGTGCTCTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAGCTACCCTGCTCACCTaGCAGGCCCCAGCCGCACAA +
Preference number: 2 (lower is better)
Translates to: HPTPATGLFGLVPPEASAATLLT*QAPAAQ
Trigger: TTGTGCGGCTGGGGCCTGCCAGGTGAGCAGGGTAGC...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTCTGCAGCCAGGCAGGTaGGCCGTGGGATGGATGCAC +
Preference number: 2 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTLQPGR*AVGWMH
Trigger: GTGCATCCATCCCACGGCCCACCTGCCTGGCTGCAG...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCAAGTGGTTCAGGTGCTaGCTGAGGAGGGTCTGGAAA +
Preference number: 2 (lower is better)
Translates to: CQASATDRAAGACCSYHFKWFRC*LRRVWK
Trigger: TTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTT...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTGCTGGCCCTTGGCAGTaGACACCCCAGGGGCTAGGC +
Preference number: 2 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLAGPWQ*TPQGLG
Trigger: GCCTAGCCCCTGGGGTGTCCACTGCCAAGGGCCAGC...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGGTGTTTGGCACTGACTaGCCCCAGGGTCCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: ESITSSEPVPARPPQRIGVFGTD*PQGPAP
Trigger: AGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACAC...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp AGCTACCTCTCCCAGCAGACAGGTCCTGTTCAGGAGCAACGCCCACACACACATGCTACCCTGCTCACCTaGCAGGCCCCAGCCGCACAA +
Preference number: 2 (lower is better)
Translates to: SYLSQQTGPVQEQRPHTHATLLT*QAPAAQ
Trigger: TTGTGCGGCTGGGGCCTGCCAGGTGAGCAGGGTAGC...ATGTGTGTGTGGGCGTTGCTCCTGAACAGGACCTGTCTGCTGGGAGAGGTAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR CAA 90 bp TCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCTGTGTTaGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGC +
Preference number: 2 (lower is better)
Translates to: SWAVWGHAKPIQLLC*ALTGPRVQLLSLSG
Trigger: GCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR GCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGATCACAGAGAACCTCCTaGAGCCAGGCAGGTGGGCCG +
Preference number: 2 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRSQRTS*SQAGGP
Trigger: CGGCCCACCTGCCTGGCTGCAGGAGGTTCTCTGTGA...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCCGCGCAGAAGAAGGCTaGCCTTGCCCGCCTCACAGC +
Preference number: 2 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLRAEEG*PCPPHS
Trigger: GCTGTGAGGCGGGCAAGGCCAGCCTTCTTCTGCGCG...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGCCATCCATGGGGCTATaGCACATACAGGGTTTTCAC +
Preference number: 2 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQPSMGL*HIQGFH
Trigger: GTGAAAACCCTGTATGTGCCATAGCCCCATGGATGG...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp TGCCCGCACCATCTGGGACGGCAGGGGCAGGTACATGGTTTAGATCACAAAGCCGTGTTTGGCACTGACTaGCCCCAGGGTCCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: CPHHLGRQGQVHGLDHKAVFGTD*PQGPAP
Trigger: AGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACAC...GGCTTTGTGATCTAAACCATGTACCTGCCCCTGCCGTCCCAGATGGTGCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR TCA 90 bp ACAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGGTTCAGGTGCTGGCTaGGGAGGGTCTGGAAATGGG +
Preference number: 2 (lower is better)
Translates to: TRQVASFLGSLGTCQTHPGSGAG*GGSGNG
Trigger: CCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACC...TGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR TCA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGGTGATTGACAGGAGGTaGATATGGGGCCTCACCAGC +
Preference number: 2 (lower is better)
Translates to: ESITSSEPVPARPPQRIGVIDRR*IWGLTS
Trigger: GCTGGTGAGGCCCCATATTCACCTCCTGTCAATCAC...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR TCA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATGTGATTGACAGGAGGTaGATATGGGGCCTCACCAGC +
Preference number: 2 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHVIDRR*IWGLTS
Trigger: GCTGGTGAGGCCCCATATTCACCTCCTGTCAATCAC...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp TGCCCGCACCATCTGGGACGGCAGGGGCAGGTACATGGTTTAGATCACAAAGCCTGGCTGAGGAGGGTCTaGAAATGGGAGGCACCCATC +
Preference number: 2 (lower is better)
Translates to: CPHHLGRQGQVHGLDHKAWLRRV*KWEAPI
Trigger: GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCA...GGCTTTGTGATCTAAACCATGTACCTGCCCCTGCCGTCCCAGATGGTGCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGTTTGGCAGTTGTGTTaGCACCAAGGACTTAGAACC +
Preference number: 2 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLVWQLC*HQGLRT
Trigger: GGTTCTAAGTCCTTGGTGCCAACACAACTGCCAAAC...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGCAAACTCAGTGGGTTTaGCAGTTGTGTTGGCACCAA +
Preference number: 2 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRQTQWV*QLCWHQ
Trigger: TTGGTGCCAACACAACTGCCAAACCCACTGAGTTTG...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR CAA 90 bp TCTCTTTCTGCCACTCTGGTAAAGCACTCGCCACAACCAACGGGATaGCTGGCCCACCTAGCTACACCCAGCCCCACTGTAAGGAAGCCC +
Preference number: 2 (lower is better)
Translates to: SLSATLVKHSPQPTG*LAHLATPSPTVRKP
Trigger: GGGCTTCCTTACAGTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGCTTTACCAGAGTGGCAGAAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR GCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGTCACAGAGAACCTCCTaGAGCCAGGCAGGTGGGCCG +
Preference number: 2 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQSQRTS*SQAGGP
Trigger: CGGCCCACCTGCCTGGCTGCAGGAGGTTCTCTGTGA...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR GCA 90 bp GTCCCAGAGCACACCCATGCCAGCCTGGTCAATAAGGGACTGTCCCCATCCCACGGGCCTGCAAGTTCCTaGAAGGGAGCAATGTACTCT +
Preference number: 2 (lower is better)
Translates to: VPEHTHASLVNKGLSPSHGPASS*KGAMYS
Trigger: AGAGTACATTGCTCCCTTGCAGGAACTTGCAGGCCC...GTGGGATGGGGACAGTCCCTTATTGACCAGGCTGGCATGGGTGTGCTCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGCCATCCATGGGGCTATaGCACATACAGGGTTTTCAC +
Preference number: 2 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGPSMGL*HIQGFH
Trigger: GTGAAAACCCTGTATGTGCCATAGCCCCATGGATGG...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACATGGCTGAGGAGGGTCTaGAAATGGGAGGCACCCATC +
Preference number: 2 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTWLRRV*KWEAPI
Trigger: GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCA...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp GCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAGCAGCAGGGCAGCAAGTGGTTCAGGTGCTaGCTGAGGAGGGTCTGGAAA +
Preference number: 2 (lower is better)
Translates to: ALWLSASRSISKGQQQGSKWFRC*LRRVWK
Trigger: TTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTT...GCTGCCCTGCTGCTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAAGTGGTTCAGGTGCTaGCTGAGGAGGGTCTGGAAA +
Preference number: 2 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHKWFRC*LRRVWK
Trigger: TTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTT...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACAGAGCCACAAGGCAAGTaGCCTCCTTCCTGGGCAGTT +
Preference number: 2 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTEPQGK*PPSWAV
Trigger: AACTGCCCAGGAAGGAGGCCACTTGCCTTGTGGCTC...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp GCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAGCAGCAGGGCAGCCTCAGGAGAGCTTGCTaGGACAGTACCCAAACTCAG +
Preference number: 2 (lower is better)
Translates to: ALWLSASRSISKGQQQGSLRRAC*DSTQTQ
Trigger: CTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAG...GCTGCCCTGCTGCTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR GCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGAATGAAGTGGTTCAGGTaGTGGCTGAGGAGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRMKWFR*WLRRVW
Trigger: CCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR GCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAGGGCCTGCAAGTTCCTaGAAGGGAGCAATGTACTCT +
Preference number: 2 (lower is better)
Translates to: HPTPATGLFGLVPPEASAGPASS*KGAMYS
Trigger: AGAGTACATTGCTCCCTTGCAGGAACTTGCAGGCCC...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCCCATCCATGGGGCTATaGCACATACAGGGTTTTCAC +
Preference number: 2 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSPSMGL*HIQGFH
Trigger: GTGAAAACCCTGTATGTGCCATAGCCCCATGGATGG...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp GGTACATGGTTTAGATCACAAAGCCAGGAGCTTCCAAATCTCTTTCTGCCACTCAGGCTGGGAGGCCTGTaGAGGTGGGGGCGCCATGGG +
Preference number: 2 (lower is better)
Translates to: GTWFRSQSQELPNLFLPLRLGGL*RWGRHG
Trigger: CCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT...GAGTGGCAGAAAGAGATTTGGAAGCTCCTGGCTTTGTGATCTAAACCATGTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTCCTTCCTGGGCAGTTTaGGGACATGCCAAACCCATC +
Preference number: 2 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTPSWAV*GHAKPI
Trigger: GATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGG...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTGAGCCACAAGGCAAGTaGCCTCCTTCCTGGGCAGTT +
Preference number: 2 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLEPQGK*PPSWAV
Trigger: AACTGCCCAGGAAGGAGGCCACTTGCCTTGTGGCTC...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCACAAACTCAGTGGGTTTaGCAGTTGTGTTGGCACCAA +
Preference number: 2 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSQTQWV*QLCWHQ
Trigger: TTGGTGCCAACACAACTGCCAAACCCACTGAGTTTG...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCACTCAGGAGAGCTTGCTaGGACAGTACCCAAACTCAG +
Preference number: 2 (lower is better)
Translates to: HPTPATGLFGLVPPEASALRRAC*DSTQTQ
Trigger: CTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAG...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACACACGTAAACATCAGGTaGGCTGGGCAGAGGCACACA +
Preference number: 2 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTHVNIR*AGQRHT
Trigger: TGTGTGCCTCTGCCCAGCCCACCTGATGTTTACGTG...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR GCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGAGGGCCTGCAAGTTCCTaGAAGGGAGCAATGTACTCT +
Preference number: 2 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRGPASS*KGAMYS
Trigger: AGAGTACATTGCTCCCTTGCAGGAACTTGCAGGCCC...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGTGGCTGAGGAGGGTCTaGAAATGGGAGGCACCCATC +
Preference number: 2 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQWLRRV*KWEAPI
Trigger: GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCA...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp ACAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAAAGTGGTTCAGGTGCTaGCTGAGGAGGGTCTGGAAA +
Preference number: 2 (lower is better)
Translates to: TRQVASFLGSLGTCQTHPKWFRC*LRRVWK
Trigger: TTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTT...TGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGGAGCCACAAGGCAAGTaGCCTCCTTCCTGGGCAGTT +
Preference number: 2 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQEPQGK*PPSWAV
Trigger: AACTGCCCAGGAAGGAGGCCACTTGCCTTGTGGCTC...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CAA 90 bp AGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGTaGTGTTGGCACCAAGGACTTAGAACCACTCGTCTGCCCAGGTTG +
Preference number: 2 (lower is better)
Translates to: RRACWDSTQTQWVWQ*CWHQGLRTTRLPRL
Trigger: CAACCTGGGCAGACGAGTGGTTCTAAGTCCTTGGTGCCAACACAACTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR GCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGCCTGCAAGTTCCTaGAAGGGAGCAATGTACTCT +
Preference number: 2 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCGPASS*KGAMYS
Trigger: AGAGTACATTGCTCCCTTGCAGGAACTTGCAGGCCC...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR GCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACAAAACAGGGAGACCCATaGTACCCCTGGGCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTKQGDP*YPWALG
Trigger: GCCCAGAGCCCAGGGGTAGCATGGGTCTCCCTGTTT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp GGTACATGGTTTAGATCACAAAGCCAGGAGCTTCCAAATCTCTTTCTGCCACTCCGCGCAGAAGAAGGCTaGCCTTGCCCGCCTCACAGC +
Preference number: 2 (lower is better)
Translates to: GTWFRSQSQELPNLFLPLRAEEG*PCPPHS
Trigger: GCTGTGAGGCGGGCAAGGCCAGCCTTCTTCTGCGCG...GAGTGGCAGAAAGAGATTTGGAAGCTCCTGGCTTTGTGATCTAAACCATGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp ACAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCACCATCCATGGGGCTATaGCACATACAGGGTTTTCAC +
Preference number: 2 (lower is better)
Translates to: TRQVASFLGSLGTCQTHPPSMGL*HIQGFH
Trigger: GTGAAAACCCTGTATGTGCCATAGCCCCATGGATGG...TGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCACAAACTCAGTGGGTTTaGCAGTTGTGTTGGCACCAA +
Preference number: 2 (lower is better)
Translates to: HPTPATGLFGLVPPEASAQTQWV*QLCWHQ
Trigger: TTGGTGCCAACACAACTGCCAAACCCACTGAGTTTG...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGCCATCCATGGGGCTATaGCACATACAGGGTTTTCAC +
Preference number: 2 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQPSMGL*HIQGFH
Trigger: GTGAAAACCCTGTATGTGCCATAGCCCCATGGATGG...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATAGGCTGGGAGGCCTGTaGAGGTGGGGGCGCCATGGG +
Preference number: 2 (lower is better)
Translates to: AREQCTLSFKATNKNNGDRLGGL*RWGRHG
Trigger: CCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGTTTGGCAGTTGTGTTaGCACCAAGGACTTAGAACC +
Preference number: 2 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCVWQLC*HQGLRT
Trigger: GGTTCTAAGTCCTTGGTGCCAACACAACTGCCAAAC...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGAGGCTGGGAGGCCTGTaGAGGTGGGGGCGCCATGGG +
Preference number: 2 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRRLGGL*RWGRHG
Trigger: CCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CAA 90 bp CAGAGATACCTTCAGAAGCCAGGCATGTACAGTACCAATGCCGGGTaGAAGGCTAAAGTGACAGAGGAACTAAGTATGGAGAGGAACACC +
Preference number: 2 (lower is better)
Translates to: QRYLQKPGMYSTNAG*KAKVTEELSMERNT
Trigger: GGTGTTCCTCTCCATACTTAGTTCCTCTGTCACTTTAGCCTTCAACCCGGCATTGGTACTGTACATGCCTGGCTTCTGAAGGTATCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGCGCGCAGAAGAAGGCTaGCCTTGCCCGCCTCACAGC +
Preference number: 2 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRRAEEG*PCPPHS
Trigger: GCTGTGAGGCGGGCAAGGCCAGCCTTCTTCTGCGCG...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR TCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATGGTTCAGGTGCTGGCTaGGGAGGGTCTGGAAATGGG +
Preference number: 2 (lower is better)
Translates to: AREQCTLSFKATNKNNGDGSGAG*GGSGNG
Trigger: CCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACC...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR GCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGTCACAGAGAACCTCCTaGAGCCAGGCAGGTGGGCCG +
Preference number: 2 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRSQRTS*SQAGGP
Trigger: CGGCCCACCTGCCTGGCTGCAGGAGGTTCTCTGTGA...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 72 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTaGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTC +
Preference number: 3 (lower is better)
Translates to: GWEACGGGGAMG*MKWFRCWLRRV
Trigger: GACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CAA 90 bp GCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTACTCGTCTGCCCAGGTaGATGGACTCTGCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: ACPCQASATDRAAGACCSTRLPR*MDSAAA
Trigger: AGCTGCTGCAGAGTCCATCAACCTGGGCAGACGAGT...ACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR GCA 72 bp ACCTCCTGCAGCCAGGCAGGTGGGCCGTGGGATGGATaGACAGGACACACGCGCAGAAGAAGGCTGGCCTTG +
Preference number: 3 (lower is better)
Translates to: TSCSQAGGPWDG*TGHTRRRRLAL
Trigger: CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGGCTGCAGGAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR GCA 72 bp GGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGTaGTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCC +
Preference number: 3 (lower is better)
Translates to: GGGAMGWMKWFR*WLRRVWKWEAP
Trigger: GGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCATGGCGCCCCCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR GCA 72 bp ATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTaGCCGCACCATCTGGGACGGCAGGGGCAGGTACAT +
Preference number: 3 (lower is better)
Translates to: IGPQEPAAVTTS*PHHLGRQGQVH
Trigger: ATGTACCTGCCCCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR CCA 72 bp GGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGTGCTaGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATC +
Preference number: 3 (lower is better)
Translates to: GGAMGWMKWFRC*LRRVWKWEAPI
Trigger: GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCATGGCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CAA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGACTCGTCTGCCCAGGTaGATGGACTCTGCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLTRLPR*MDSAAA
Trigger: AGCTGCTGCAGAGTCCATCAACCTGGGCAGACGAGT...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR CCA 72 bp GGACTGTCCCCATCCCACTCCAGCCACCGGGCTCTTTaGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAG +
Preference number: 3 (lower is better)
Translates to: GLSPSHSSHRAL*LSASRSISKGQ
Trigger: CTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATGGGGACAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CAA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGCAGTGGGTTTGGCAGTaGTGTTGGCACCAAGGACTT +
Preference number: 3 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRQWVWQ*CWHQGL
Trigger: AAGTCCTTGGTGCCAACACAACTGCCAAACCCACTG...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR TCA 72 bp CCCTGCTCACCTGGCAGGCCCCAGCCGCACAAATCCTaGGAAAGCATAACCAGTAGTGAGCCTGTCCCTGCC +
Preference number: 3 (lower is better)
Translates to: PCSPGRPQPHKS*ESITSSEPVPA
Trigger: GGCAGGGACAGGCTCACTACTGGTTATGCTTTCTCAGGATTTGTGCGGCTGGGGCCTGCCAGGTGAGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR-3UTR CAA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACCAGTGGGTTTGGCAGTaGTGTTGGCACCAAGGACTT +
Preference number: 3 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHQWVWQ*CWHQGL
Trigger: AAGTCCTTGGTGCCAACACAACTGCCAAACCCACTG...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CAA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACCCAAACTCAGTGGGTTaGGCAGTTGTGTTGGCACCA +
Preference number: 3 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHPNSVG*AVVLAP
Trigger: TGGTGCCAACACAACTGCCAAACCCACTGAGTTTGG...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 72 bp CCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTaGGATGAATCCACTCAGGAGAGCTTGCTGGGACAG +
Preference number: 3 (lower is better)
Translates to: PSPTVRKPSVPS*DESTQESLLGQ
Trigger: CTGTCCCAGCAAGCTCTCCTGAGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CAA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCACCAAACTCAGTGGGTTaGGCAGTTGTGTTGGCACCA +
Preference number: 3 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSPNSVG*AVVLAP
Trigger: TGGTGCCAACACAACTGCCAAACCCACTGAGTTTGG...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR GCA 72 bp GCTATGGCACATACAGGGTTTTCACAGAGAACCTCCTaGAGCCAGGCAGGTGGGCCGTGGGATGGATGCACA +
Preference number: 3 (lower is better)
Translates to: AMAHTGFSQRTS*SQAGGPWDGCT
Trigger: TGTGCATCCATCCCACGGCCCACCTGCCTGGCTGCAGGAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 72 bp TGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTaGAAATGGGAGGCACCCATCCATGGGGCTATGGCA +
Preference number: 3 (lower is better)
Translates to: WMKWFRCWLRRV*KWEAPIHGAMA
Trigger: TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR TCA 72 bp CAGGTGGGCTGGGCAGAGGCACACAGGACCCGTGCATaGCTCTATCAGCTAAGTGTAAACAGGGAGACCCAT +
Preference number: 3 (lower is better)
Translates to: QVGWAEAHRTRA*LYQLSVNRETH
Trigger: ATGGGTCTCCCTGTTTACACTTAGCTGATAGAGTCATGCACGGGTCCTGTGTGCCTCTGCCCAGCCCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR CCA 72 bp AAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATaGGAGGCACCCATCCATGGGGCTATGGCACATACA +
Preference number: 3 (lower is better)
Translates to: KWFRCWLRRVWK*EAPIHGAMAHT
Trigger: TGTATGTGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR GCA 72 bp ACATCAGGTGGGCTGGGCAGAGGCACACAGGACCCGTaGATGACTCTATCAGCTAAGTGTAAACAGGGAGAC +
Preference number: 3 (lower is better)
Translates to: TSGGLGRGTQDP*MTLSAKCKQGD
Trigger: GTCTCCCTGTTTACACTTAGCTGATAGAGTCATGCACGGGTCCTGTGTGCCTCTGCCCAGCCCACCTGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR GCA 72 bp TACACAGTGATGACCAAGGGTGGGAGGCATGGACTCTaGAGGACAGCCGTTTACTTACAGGGAGCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: YTVMTKGGRHGL*RTAVYLQGAGC
Trigger: ACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR CCA 72 bp GGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATaGCACATACAGGGTTTTCACAGAGAACCTCCTGCA +
Preference number: 3 (lower is better)
Translates to: GSGNGRHPSMGL*HIQGFHREPPA
Trigger: TGCAGGAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 72 bp GCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATaGGGCTATGGCACATACAGGGTTTTCACAGAGAAC +
Preference number: 3 (lower is better)
Translates to: AEEGLEMGGTHP*GYGTYRVFTEN
Trigger: GTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 72 bp GACAGTACCCAAACTCAGTGGGTTTGGCAGTTGTGTTaGCACCAAGGACTTAGAACCACTCGTCTGCCCAGG +
Preference number: 3 (lower is better)
Translates to: DSTQTQWVWQLC*HQGLRTTRLPR
Trigger: CCTGGGCAGACGAGTGGTTCTAAGTCCTTGGTGCCAACACAACTGCCAAACCCACTGAGTTTGGGTACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 72 bp TCCCTAGCTGGGATGAATCCACTCAGGAGAGCTTGCTaGGACAGTACCCAAACTCAGTGGGTTTGGCAGTTG +
Preference number: 3 (lower is better)
Translates to: SLAGMNPLRRAC*DSTQTQWVWQL
Trigger: CAACTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATTCATCCCAGCTAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CCA 72 bp CTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTaGGTTTGGCAGTTGTGTTGGCACCAAGGACTTAGA +
Preference number: 3 (lower is better)
Translates to: LRRACWDSTQTQ*VWQLCWHQGLR
Trigger: TCTAAGTCCTTGGTGCCAACACAACTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR-3UTR CAA 90 bp GGTACATGGTTTAGATCACAAAGCCAGGAGCTTCCAAATCTCTTTCTGCCACTCACTCGTCTGCCCAGGTaGATGGACTCTGCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: GTWFRSQSQELPNLFLPLTRLPR*MDSAAA
Trigger: AGCTGCTGCAGAGTCCATCAACCTGGGCAGACGAGT...GAGTGGCAGAAAGAGATTTGGAAGCTCCTGGCTTTGTGATCTAAACCATGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR TCA 72 bp AAGCTACCAACAAAAACAATGGTGATTGACAGGAGGTaGATATGGGGCCTCACCAGCTGGCCCTTGGCAGTG +
Preference number: 3 (lower is better)
Translates to: KLPTKTMVIDRR*IWGLTSWPLAV
Trigger: CACTGCCAAGGGCCAGCTGGTGAGGCCCCATATTCACCTCCTGTCAATCACCATTGTTTTTGTTGGTAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR TCA 72 bp CTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTaGCAGGAGGTGAATATGGGGCCTCACCAGCTGGCC +
Preference number: 3 (lower is better)
Translates to: LSFKATNKNNGD*QEVNMGPHQLA
Trigger: GGCCAGCTGGTGAGGCCCCATATTCACCTCCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR TCA 72 bp AATAACCATTTCCTGAAAGACATCCACAAGACCGCCTaGGAACAATGTACAGAGATACCTTCAGAAGCCAGG +
Preference number: 3 (lower is better)
Translates to: NNHFLKDIHKTA*EQCTEIPSEAR
Trigger: CCTGGCTTCTGAAGGTATCTCTGTACATTGTTCTCAGGCGGTCTTGTGGATGTCTTTCAGGAAATGGTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGCTAGACGGGCCCGCCTaGGTCGGGAGGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWLDGPA*VGRPWW
Trigger: CCACCAGGGCCTCCCGACTCAGGCGGGCCCGTCTAG...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGCCCAGGGGCCCGTGGTaGGCGCCGACCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLPRGPW*APTPDP
Trigger: TGGGTCAGGGGTCGGCGCTCACCACGGGCCCCTGGG...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGCTAGACGGGCCCGCCTaGGTCGGGAGGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRLDGPA*VGRPWW
Trigger: CCACCAGGGCCTCCCGACTCAGGCGGGCCCGTCTAG...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGCCCTGTGAAGGAGCCTaGCCGCTTCCGGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWPCEGA*PLPGHG
Trigger: GCCATGCCCCGGAAGCGGGCAGGCTCCTTCACAGGG...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGCAGCTCTGGTGGCCCTaGGCCATTCCGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWQLWWP*AIPPGS
Trigger: GCTGCCAGGCGGAATGGCCCAGGGCCACCAGAGCTG...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGCCCAGGGGCCCGTGGTaGGCGCCGACCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGPRGPW*APTPDP
Trigger: TGGGTCAGGGGTCGGCGCTCACCACGGGCCCCTGGG...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGGGAGCCGGTGGCGGGTaGCACTGCTGCTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRGAGGG*HCCSPG
Trigger: TCCTGGTGAGCAGCAGTGGCACCCGCCACCGGCTCC...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTGCCCATACAGGGGTGTaGGGTAAGCGACCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ACPCQASATDRAAGACCSAHTGV*GKRPPL
Trigger: CAGAGGCGGTCGCTTACCGCACACCCCTGTATGGGC...ACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGCAGGCTCTCCGGTTCTaGGCCCAGGACCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWQALRF*AQDRPL
Trigger: CAGAGGACGGTCCTGGGCGCAGAACCGGAGAGCCTG...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGCCCTGTGAAGGAGCCTaGCCGCTTCCGGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRPCEGA*PLPGHG
Trigger: GCCATGCCCCGGAAGCGGGCAGGCTCCTTCACAGGG...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGGCCCTGCTGAAGGGCTaGCGGGGGCCAGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRALLKG*RGPVLA
Trigger: AGCCAACACTGGCCCCCGCCAGCCCTTCAGCAGGGC...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGCCGTGCGGCTGGGGATaGTGGGGGAGCCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRPCGWG*WGSRWF
Trigger: AAACCAGCGGCTCCCCCACCATCCCCAGCCGCACGG...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GTCCCAGAGCACACCCATGCCAGCCTGGTCAATAAGGGACTGTCCCCATCCCACCCCAGGGGCCCGTGGTaGGCGCCGACCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: VPEHTHASLVNKGLSPSHPRGPW*APTPDP
Trigger: TGGGTCAGGGGTCGGCGCTCACCACGGGCCCCTGGG...GTGGGATGGGGACAGTCCCTTATTGACCAGGCTGGCATGGGTGTGCTCTGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGCTAGACGGGCCCGCCTaGGTCGGGAGGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGLDGPA*VGRPWW
Trigger: CCACCAGGGCCTCCCGACTCAGGCGGGCCCGTCTAG...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGCTCTGCAGCCGCACCTaGTCCCCACTGGCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLLCSRT*SPLASA
Trigger: AGCGGAGGCCAGTGGGGAGCAGGTGCGGCTGCAGAG...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGCAGGCTCTCCGGTTCTaGGCCCAGGACCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRQALRF*AQDRPL
Trigger: CAGAGGACGGTCCTGGGCGCAGAACCGGAGAGCCTG...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGGCTTTGCTCCTCCCGTaGGGCTGGGGATGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRALLLP*GWGWWG
Trigger: CCCCCACCATCCCCAGCCGCACGGGAGGAGCAAAGC...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGGCCCTGCTGAAGGGCTaGCGGGGGCCAGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRALLKG*RGPVLA
Trigger: AGCCAACACTGGCCCCCGCCAGCCCTTCAGCAGGGC...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGGCAGTTGGCCCGCTGTaGGAAGCTCCTGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWAVGPL*EAPERQ
Trigger: CTGCCTCTCAGGAGCTTCCCACAGCGGGCCAACTGC...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGCCGTCTCCACAGGGGTaGTCTCCTTGCTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRPSPQG*SPCWEP
Trigger: GGGCTCCCAGCAAGGAGACCACCCCTGTGGAGACGG...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGTGGGCCATGAAGTCCTaGGCCAGGCGGGAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALWAMKS*ARRERR
Trigger: GCGCCGCTCCCGCCTGGCCCAGGACTTCATGGCCCA...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGCAGCTCTGGTGGCCCTaGGCCATTCCGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQQLWWP*AIPPGS
Trigger: GCTGCCAGGCGGAATGGCCCAGGGCCACCAGAGCTG...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGGCCTCGGCCGCCATCTaGCCCACTGGCATCACTGAG +
Preference number: 4 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRASAAI*PTGITE
Trigger: CTCAGTGATGCCAGTGGGTCAGATGGCGGCCGAGGC...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCACCCAGGGGCCCGTGGTaGGCGCCGACCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: HPTPATGLFGLVPPEASAPRGPW*APTPDP
Trigger: TGGGTCAGGGGTCGGCGCTCACCACGGGCCCCTGGG...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGGGTGGCGGGTGCCACTaGTGCTCACCAGGAACCAAG +
Preference number: 4 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRGGGCH*CSPGTK
Trigger: CTTGGTTCCTGGTGAGCAGCAGTGGCACCCGCCACC...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACGGAGCCGGTGGCGGGTaGCACTGCTGCTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHGAGGG*HCCSPG
Trigger: TCCTGGTGAGCAGCAGTGGCACCCGCCACCGGCTCC...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGAGCCGGTGGCGGGTaGCACTGCTGCTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKAGAGGG*HCCSPG
Trigger: TCCTGGTGAGCAGCAGTGGCACCCGCCACCGGCTCC...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGGGAGCCGGTGGCGGGTaGCACTGCTGCTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALGAGGG*HCCSPG
Trigger: TCCTGGTGAGCAGCAGTGGCACCCGCCACCGGCTCC...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGCCCCACCAGGAGGGCTaGCCATACAGGGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALPHQEG*PYRGVR
Trigger: CCGCACACCCCTGTATGGGCAGCCCTCCTGGTGGGG...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTGGGGCCAGTGTTGGCTaGAGTAGCAGCAGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: ACPCQASATDRAAGACCSGASVG*SSSSLL
Trigger: AAGAAGGCTGCTGCTACTGCAGCCAACACTGGCCCC...ACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCAAGGAGGCGTGGCTCTaGACCACAGGGGCCGTCCCA +
Preference number: 4 (lower is better)
Translates to: CQASATDRAAGACCSYHFKEAWL*TTGAVP
Trigger: TGGGACGGCCCCTGTGGTGCAGAGCCACGCCTCCTT...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGGGGTCCCTTTTGATCTaGCTCTGCAGCCGCACCTGC +
Preference number: 4 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWGSLLI*LCSRTC
Trigger: GCAGGTGCGGCTGCAGAGGCAGATCAAAAGGGACCC...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTACGCTCACCTGCAGCTaGCTGGTGTACTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: ACPCQASATDRAAGACCSTLTCS*LVYFSC
Trigger: GCACGAGAAGTACACCAGCCAGCTGCAGGTGAGCGT...ACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTTTGTGGGCACTTCCTaGGTAGGCACCTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ACPCQASATDRAAGACCSFVGTS*VGTSGS
Trigger: GCTCCCTGAGGTGCCTACCCAGGAAGTGCCCACAAA...ACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGGAGATGGGCTGCGAGTaGGGCCTGGGGAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALEMGCE*GLGSPV
Trigger: CACTGGGCTCCCCAGGCCCCACTCGCAGCCCATCTC...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCCGGCGCAGCAGGCTTaGGTCGTTCTGCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: CQASATDRAAGACCSYHFPAQQA*VVLHQP
Trigger: TGGCTGGTGCAGAACGACCCAAGCCTGCTGCGCCGG...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCACTGCCCAGCTCTGGTaGCCCTGGGCCATTCCGCCT +
Preference number: 4 (lower is better)
Translates to: CQASATDRAAGACCSYHFTAQLW*PWAIPP
Trigger: AGGCGGAATGGCCCAGGGCCACCAGAGCTGGGCAGT...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCACTCCTCCCGTGCGGCTaGGGATGGTGGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMALLPCG*GWWGSR
Trigger: GCGGCTCCCCCACCATCCCCAGCCGCACGGGAGGAG...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGCTGCTGTCTGCACGATaGAGCCGTAGGGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRLLSAR*SRRGQA
Trigger: AGCCTGACCCCTACGGCTTCATCGTGCAGACAGCAG...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTCCCAGGACCCACAAATaGTTTCTTGGGGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ACPCQASATDRAAGACCSPRTHK*FLGEGG
Trigger: GCCACCTTCCCCAAGAAATCATTTGTGGGTCCTGGG...ACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGCATGGCTGCGCGCCTTaGTGTGTCTCCAGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQHGCAP*CVSRAQ
Trigger: TTGGGCCCTGGAGACACATCAAGGCGCGCAGCCATG...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGGCCCATACAGGGGTGTaGGGTAAGCGACCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRAHTGV*GKRPPL
Trigger: CAGAGGCGGTCGCTTACCGCACACCCCTGTATGGGC...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTCCCCACCAGGAGGGCTaGCCATACAGGGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: RWAVGWMHRTHAQKKAGLPHQEG*PYRGVR
Trigger: CCGCACACCCCTGTATGGGCAGCCCTCCTGGTGGGG...AAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCACCCCACCAGGAGGGCTaGCCATACAGGGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSPHQEG*PYRGVR
Trigger: CCGCACACCCCTGTATGGGCAGCCCTCCTGGTGGGG...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGAGGTCCTTGTCGGCCTaGCAGGGTAGCCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQRSLSA*QGSLWG
Trigger: ACCCCAGAGGCTACCCTGGCAGGCCGACAAGGACCT...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTTGTGGGCACTTCCTaGGTAGGCACCTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWFVGTS*VGTSGS
Trigger: GCTCCCTGAGGTGCCTACCCAGGAAGTGCCCACAAA...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCAGAGATGGGCTGCGAGTaGGGCCTGGGGAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSEMGCE*GLGSPV
Trigger: CACTGGGCTCCCCAGGCCCCACTCGCAGCCCATCTC...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTGAGATGGGCTGCGAGTaGGGCCTGGGGAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCEMGCE*GLGSPV
Trigger: CACTGGGCTCCCCAGGCCCCACTCGCAGCCCATCTC...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGCAGTTGGCCCGCTGTaGGAAGCTCCTGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQAVGPL*EAPERQ
Trigger: CTGCCTCTCAGGAGCTTCCCACAGCGGGCCAACTGC...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTCCGTCTCCACAGGGGTaGTCTCCTTGCTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKAPSPQG*SPCWEP
Trigger: GGGCTCCCAGCAAGGAGACCACCCCTGTGGAGACGG...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTCCGGCGCAGCAGGCTTaGGTCGTTCTGCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKAPAQQA*VVLHQP
Trigger: TGGCTGGTGCAGAACGACCCAAGCCTGCTGCGCCGG...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGCAGCTCTGGTGGCCCTaGGCCATTCCGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGQLWWP*AIPPGS
Trigger: GCTGCCAGGCGGAATGGCCCAGGGCCACCAGAGCTG...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCACACGCCCCACGAAGATaGGTTCACGCGGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSHAPRR*VHAGAG
Trigger: ACCGGCTCCCGCGTGAACTCATCTTCGTGGGGCGTG...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTTGGGCGCAGAGACCTTaGCGCTCACCTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCWAQRP*RSPAAG
Trigger: GCCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCA...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGCTGCTGTCTGCACGATaGAGCCGTAGGGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQLLSAR*SRRGQA
Trigger: AGCCTGACCCCTACGGCTTCATCGTGCAGACAGCAG...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GTCCCAGAGCACACCCATGCCAGCCTGGTCAATAAGGGACTGTCCCCATCCCACGCATGCACTGGGCCATaGAGTCCTGGGCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: VPEHTHASLVNKGLSPSHACTGP*SPGPGG
Trigger: CCCGCCTGGCCCAGGACTTCATGGCCCAGTGCATGC...GTGGGATGGGGACAGTCCCTTATTGACCAGGCTGGCATGGGTGTGCTCTGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACCGGGAAACCCACTTCTaGCCCCCAGGAGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHRETHF*PPGEPG
Trigger: CCCAGGTTCTCCTGGGGGTCAGAAGTGGGTTTCCCG...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGCTACCACTGGGCAACTaGGGGAGCAGACGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQLPLGN*GSRRRV
Trigger: AACTCGGCGTCTGCTCCCTCAGTTGCCCAGTGGTAG...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGGCCTCGGCCGCCATCTaGCCCACTGGCATCACTGAG +
Preference number: 4 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGASAAI*PTGITE
Trigger: CTCAGTGATGCCAGTGGGTCAGATGGCGGCCGAGGC...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCGGCGGGTGCCACTGCTaGTCACCAGGAACCAAGATG +
Preference number: 4 (lower is better)
Translates to: CQASATDRAAGACCSYHFGGCHC*SPGTKM
Trigger: CATCTTGGTTCCTGGTGAGCAGCAGTGGCACCCGCC...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTGGAGCCGGTGGCGGGTaGCACTGCTGCTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSGAGGG*HCCSPG
Trigger: TCCTGGTGAGCAGCAGTGGCACCCGCCACCGGCTCC...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGAGTCCCACCAACACCTaGCTCCTGGTCTTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWSPTNT*LLVFCG
Trigger: CCCACAAAAGACCAGGAGGCAGGTGTTGGTGGGACT...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000092279.7
CDS-3UTR GCA 90 bp GCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAGCAGCAGGGCAGCTCCCGAGAGATGGGCTaGGAGTGGGGCCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: ALWLSASRSISKGQQQGSSREMG*EWGLGS
Trigger: GCTCCCCAGGCCCCACTCGCAGCCCATCTCTCGGGA...GCTGCCCTGCTGCTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTTCCCGAGAGATGGGCTaGGAGTGGGGCCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSSREMG*EWGLGS
Trigger: GCTCCCCAGGCCCCACTCGCAGCCCATCTCTCGGGA...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GTCCCAGAGCACACCCATGCCAGCCTGGTCAATAAGGGACTGTCCCCATCCCACTCCCGAGAGATGGGCTaGGAGTGGGGCCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VPEHTHASLVNKGLSPSHSREMG*EWGLGS
Trigger: GCTCCCCAGGCCCCACTCGCAGCCCATCTCTCGGGA...GTGGGATGGGGACAGTCCCTTATTGACCAGGCTGGCATGGGTGTGCTCTGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTAAGGAGGCGTGGCTCTaGACCACAGGGGCCGTCCCA +
Preference number: 4 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCKEAWL*TTGAVP
Trigger: TGGGACGGCCCCTGTGGTGCAGAGCCACGCCTCCTT...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGAGGCTTGGGTCGTTCTaGACCAGCCAGTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALRLGSF*TSQSAT
Trigger: GGTGGCCGACTGGCTGGTGCAGAACGACCCAAGCCT...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTAGGCTTGGGTCGTTCTaGACCAGCCAGTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKARLGSF*TSQSAT
Trigger: GGTGGCCGACTGGCTGGTGCAGAACGACCCAAGCCT...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGAGTTTGCTGGCTCACTaGCCAGCTCTGGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRSLLAH*PALVAL
Trigger: CAGGGCCACCAGAGCTGGGCAGTGAGCCAGCAAACT...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCTCGAGCTTCCAGGGCTaGCAGGGCTGTCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: CQASATDRAAGACCSYHFSSFQG*QGCLSL
Trigger: GAGACTGAGACAGCCCTGGCAGCCCTGGAAGCTCGA...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGTCGAGCTTCCAGGGCTaGCAGGGCTGTCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLSSFQG*QGCLSL
Trigger: GAGACTGAGACAGCCCTGGCAGCCCTGGAAGCTCGA...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAGCAGCAGGGCAGCGCTTTGCTCCTCCCGTaGGGCTGGGGATGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ALWLSASRSISKGQQQGSALLLP*GWGWWG
Trigger: CCCCCACCATCCCCAGCCGCACGGGAGGAGCAAAGC...GCTGCCCTGCTGCTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCGCTTTGCTCCTCCCGTaGGGCTGGGGATGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GKWPPSWAVWGHAKPIQLALLLP*GWGWWG
Trigger: CCCCCACCATCCCCAGCCGCACGGGAGGAGCAAAGC...GAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCACCCTGTGAAGGAGCCTaGCCGCTTCCGGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMAPCEGA*PLPGHG
Trigger: GCCATGCCCCGGAAGCGGGCAGGCTCCTTCACAGGG...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCGCCCTGCTGAAGGGCTaGCGGGGGCCAGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSALLKG*RGPVLA
Trigger: AGCCAACACTGGCCCCCGCCAGCCCTTCAGCAGGGC...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGCCCTTGGGGTCTGTGTaGCTGTTGAGGCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRPLGSV*LLRHGS
Trigger: GCTCCCATGCCTCAACAGCCACACAGACCCCAAGGG...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCAGAGATGGGCTGCGAGTaGGGCCTGGGGAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMAEMGCE*GLGSPV
Trigger: CACTGGGCTCCCCAGGCCCCACTCGCAGCCCATCTC...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGCTTCCCGGGCTGAGATaGTTGAGGCAGGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQLPGLR*LRQGCW
Trigger: CCAACACCCCTGCCTCAACCATCTCAGCCCGGGAAG...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGGTTCAGGCTGGCCTCTaGTATACGCTGTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWVQAGL*YTLYQL
Trigger: GAGCTGGTACAGCGTATACCAGAGGCCAGCCTGAAC...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCACCGTCTCCACAGGGGTaGTCTCCTTGCTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSPSPQG*SPCWEP
Trigger: GGGCTCCCAGCAAGGAGACCACCCCTGTGGAGACGG...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACGCCAGTCGGCCACCTTaGTTTCGGCCGAGACCGTCT +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHASRPP*FRPRPS
Trigger: AGACGGTCTCGGCCGAAACCAAGGTGGCCGACTGGC...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTGCACCTGCTCCCCACTaGCCTCCGCTGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSAPAPH*PPLRLQ
Trigger: CTGGAGCCTCAGCGGAGGCCAGTGGGGAGCAGGTGC...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCGCACCTGCTCCCCACTaGCCTCCGCTGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSAPAPH*PPLRLQ
Trigger: CTGGAGCCTCAGCGGAGGCCAGTGGGGAGCAGGTGC...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCATGGGCCATGAAGTCCTaGGCCAGGCGGGAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: HPTPATGLFGLVPPEASAWAMKS*ARRERR
Trigger: GCGCCGCTCCCGCCTGGCCCAGGACTTCATGGCCCA...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGTCAGCTGAGGGTCAGTaGGAGGCGGTGGGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALSAEGQ*EAVGWL
Trigger: CAACCACCCCACCGCCTCCCACTGACCCTCAGCTGA...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTTCAGCTGAGGGTCAGTaGGAGGCGGTGGGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKASAEGQ*EAVGWL
Trigger: CAACCACCCCACCGCCTCCCACTGACCCTCAGCTGA...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGAGGTCAGAGTCTCCTTaGGTGGAGCTGGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRRSESP*VELGQA
Trigger: AGCCTGACCCAGCTCCACCCAAGGAGACTCTGACCT...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGTGCGGCTGGGGATGGTaGGGGAGCCGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: ESITSSEPVPARPPQRIGCGWGW*GSRWFP
Trigger: CGGAAACCAGCGGCTCCCCCACCATCCCCAGCCGCA...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCTCCTCCCGTGCGGCTaGGGATGGTGGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPILLPCG*GWWGSR
Trigger: GCGGCTCCCCCACCATCCCCAGCCGCACGGGAGGAG...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACGGCCCTGGTGGGCCTTaGGGTGGACAGGCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHGPGGP*GGQAVR
Trigger: TCTAACAGCCTGTCCACCCCAAGGCCCACCAGGGCC...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTCCCGCTTCCGGGGCATaGCCAGGATGTCCAAGCGTG +
Preference number: 4 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCPASGA*PGCPSV
Trigger: CACGCTTGGACATCCTGGCCATGCCCCGGAAGCGGG...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GTCCCAGAGCACACCCATGCCAGCCTGGTCAATAAGGGACTGTCCCCATCCCACCACGCCCCACGAAGATaGGTTCACGCGGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: VPEHTHASLVNKGLSPSHHAPRR*VHAGAG
Trigger: ACCGGCTCCCGCGTGAACTCATCTTCGTGGGGCGTG...GTGGGATGGGGACAGTCCCTTATTGACCAGGCTGGCATGGGTGTGCTCTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTTGGGCGCAGAGACCTTaGCGCTCACCTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSWAQRP*RSPAAG
Trigger: GCCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCA...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGCAGTCTTCTCTCGCTTaGGCGAGCTGGCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALQSSLA*ASWPSV
Trigger: CACAGAGGGCCAGCTCGCTCAAGCGAGAGAAGACTG...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCCGTGCCTTGGTCAGCTaGGGGTCAGTGGGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLRALVS*GSVGGG
Trigger: ACCGCCTCCCACTGACCCTCAGCTGACCAAGGCACG...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCGTGCCTTGGTCAGCTaGGGGTCAGTGGGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GKWPPSWAVWGHAKPIQLRALVS*GSVGGG
Trigger: ACCGCCTCCCACTGACCCTCAGCTGACCAAGGCACG...GAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCGCCTCGGCCGCCATCTaGCCCACTGGCATCACTGAG +
Preference number: 4 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLASAAI*PTGITE
Trigger: CTCAGTGATGCCAGTGGGTCAGATGGCGGCCGAGGC...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGCCCAGGACCCACAAATaGTTTCTTGGGGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRPRTHK*FLGEGG
Trigger: GCCACCTTCCCCAAGAAATCATTTGTGGGTCCTGGG...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGCATGGCTGCGCGCCTTaGTGTGTCTCCAGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGHGCAP*CVSRAQ
Trigger: TTGGGCCCTGGAGACACATCAAGGCGCGCAGCCATG...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGTGGGCTTACGGCTGGTaGTGTAGAGCTCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQWAYGW*CRAQHC
Trigger: GCAGTGCTGAGCTCTACAGCACCAGCCGTAAGCCCA...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGTGGGCTTACGGCTGGTaGTGTAGAGCTCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLWAYGW*CRAQHC
Trigger: GCAGTGCTGAGCTCTACAGCACCAGCCGTAAGCCCA...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAGCAGCAGGGCAGCAAGGAGGCGTGGCTCTaGACCACAGGGGCCGTCCCA +
Preference number: 4 (lower is better)
Translates to: ALWLSASRSISKGQQQGSKEAWL*TTGAVP
Trigger: TGGGACGGCCCCTGTGGTGCAGAGCCACGCCTCCTT...GCTGCCCTGCTGCTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGCCGAGTCGCTCTGTGTaGCATCCTCATGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRPSRSV*HPHACG
Trigger: GCCACAAGCATGAGGATGGCACACAGAGCGACTCGG...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGGTCCCTTTTGATCTaGCTCTGCAGCCGCACCTGC +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKAGSLLI*LCSRTC
Trigger: GCAGGTGCGGCTGCAGAGGCAGATCAAAAGGGACCC...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTTCTGTGGTCCTGAGCTaGTGCCAGTGGCACGGACCG +
Preference number: 4 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCSVVLS*CQWHGP
Trigger: CGGTCCGTGCCACTGGCAGCAGCTCAGGACCACAGA...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCGGGAGGCAAACTCTTaGAGCAAAGCCATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: CQASATDRAAGACCSYHFREANS*SKAIRW
Trigger: CCAGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCG...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCCAGGCTCTCCGGTTCTaGGCCCAGGACCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSQALRF*AQDRPL
Trigger: CAGAGGACGGTCCTGGGCGCAGAACCGGAGAGCCTG...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCAAGGTCCTTGTCGGCCTaGCAGGGTAGCCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSRSLSA*QGSLWG
Trigger: ACCCCAGAGGCTACCCTGGCAGGCCGACAAGGACCT...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAGCCCTGCTGAAGGGCTaGCGGGGGCCAGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: HPTPATGLFGLVPPEASAALLKG*RGPVLA
Trigger: AGCCAACACTGGCCCCCGCCAGCCCTTCAGCAGGGC...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGTTAGGGGAGCTGTGGTaGGACCCATACTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQLGELW*DPYSSS
Trigger: CGAGGAGGAGTATGGGTCCCACCACAGCTCCCCTAA...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGCCCTTGGGGTCTGTGTaGCTGTTGAGGCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALPLGSV*LLRHGS
Trigger: GCTCCCATGCCTCAACAGCCACACAGACCCCAAGGG...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGTTGAGGCAGGGGTGTTaGGCACATTCCCGAGAGATG +
Preference number: 4 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRLRQGC*AHSREM
Trigger: CATCTCTCGGGAATGTGCCCAACACCCCTGCCTCAA...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACCTTCCCGGGCTGAGATaGTTGAGGCAGGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHLPGLR*LRQGCW
Trigger: CCAACACCCCTGCCTCAACCATCTCAGCCCGGGAAG...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTCCTGAGAGGCAGGGCTaGCAGCAAGGTATCCACCGA +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKAPERQG*QQGIHR
Trigger: TCGGTGGATACCTTGCTGCCAGCCCTGCCTCTCAGG...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTGGGTGGTCTCCTTGCTaGGAGCCCGCCGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTGWSPC*EPAAGA
Trigger: TGCGCCAGCGGCGGGCTCCCAGCAAGGAGACCACCC...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGAGGGTGGTCTCCTTGCTaGGAGCCCGCCGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRGWSPC*EPAAGA
Trigger: TGCGCCAGCGGCGGGCTCCCAGCAAGGAGACCACCC...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACAGGGTGGTCTCCTTGCTaGGAGCCCGCCGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTGWSPC*EPAAGA
Trigger: TGCGCCAGCGGCGGGCTCCCAGCAAGGAGACCACCC...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGGCCAGTCGGCCACCTTaGTTTCGGCCGAGACCGTCT +
Preference number: 4 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGASRPP*FRPRPS
Trigger: AGACGGTCTCGGCCGAAACCAAGGTGGCCGACTGGC...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCCGGCGCAGCAGGCTTaGGTCGTTCTGCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSPAQQA*VVLHQP
Trigger: TGGCTGGTGCAGAACGACCCAAGCCTGCTGCGCCGG...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCAGGAAGGTCGCTTTTaGTGCTGTGGCGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: CQASATDRAAGACCSYHFQEGRF*CCGGHP
Trigger: GGGATGACCGCCACAGCACCAAAAGCGACCTTCCTG...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTCTGTCCCGCATGCACTaGGCCATGAAGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCLSRMH*AMKSWA
Trigger: GGCCCAGGACTTCATGGCCCAGTGCATGCGGGACAG...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCGGGGGCAGGTCTTGTaGCTGGGGAACTGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: GKWPPSWAVWGHAKPIQLRGQVL*LGNCPA
Trigger: TGCGGGACAGTTCCCCAGCCACAAGACCTGCCCCCG...GAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGAGGGGGTCACAGGGCTaGCTCCTCGGGGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGRGSQG*LLGVSK
Trigger: CTTTGACACCCCGAGGAGCCAGCCCTGTGACCCCCT...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCATCAGCTGAGGGTCAGTaGGAGGCGGTGGGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSSAEGQ*EAVGWL
Trigger: CAACCACCCCACCGCCTCCCACTGACCCTCAGCTGA...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTCTCTGCTGCTCCATCTaGGGAGCCATGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKALCCSI*GAMPGA
Trigger: AGCACCAGGCATGGCTCCCCAGATGGAGCAGCAGAG...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GTCCCAGAGCACACCCATGCCAGCCTGGTCAATAAGGGACTGTCCCCATCCCACACTGCCCAGCTCTGGTaGCCCTGGGCCATTCCGCCT +
Preference number: 4 (lower is better)
Translates to: VPEHTHASLVNKGLSPSHTAQLW*PWAIPP
Trigger: AGGCGGAATGGCCCAGGGCCACCAGAGCTGGGCAGT...GTGGGATGGGGACAGTCCCTTATTGACCAGGCTGGCATGGGTGTGCTCTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCACTGCCCAGCTCTGGTaGCCCTGGGCCATTCCGCCT +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSTAQLW*PWAIPP
Trigger: AGGCGGAATGGCCCAGGGCCACCAGAGCTGGGCAGT...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTACTGCCCAGCTCTGGTaGCCCTGGGCCATTCCGCCT +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSTAQLW*PWAIPP
Trigger: AGGCGGAATGGCCCAGGGCCACCAGAGCTGGGCAGT...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGTGCGGCTGGGGATGGTaGGGGAGCCGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: QGKWPPSWAVWGHAKPIQCGWGW*GSRWFP
Trigger: CGGAAACCAGCGGCTCCCCCACCATCCCCAGCCGCA...CTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCCGTGCGGCTGGGGATaGTGGGGGAGCCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: QGKWPPSWAVWGHAKPIQPCGWG*WGSRWF
Trigger: AAACCAGCGGCTCCCCCACCATCCCCAGCCGCACGG...CTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTCTCCTCCCGTGCGGCTaGGGATGGTGGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCLLPCG*GWWGSR
Trigger: GCGGCTCCCCCACCATCCCCAGCCGCACGGGAGGAG...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGAGCGTGTCAGTTTCTTaGCCTGCTCAGGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQSVSVS*PAQGQH
Trigger: GTGCTGCCCCTGAGCAGGCCAAGAAACTGACACGCT...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCCCCGCTTCCGGGGCATaGCCAGGATGTCCAAGCGTG +
Preference number: 4 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLPASGA*PGCPSV
Trigger: CACGCTTGGACATCCTGGCCATGCCCCGGAAGCGGG...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTCACAAATGTCCCATTaGGACTGCCCAGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWSQMSH*DCPGPS
Trigger: TGAAGGACCTGGGCAGTCTCAATGGGACATTTGTGA...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTTGGCTGGCCAGACCCTaGAGGAGCCCTGTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCWLARP*RSPVSH
Trigger: ATGGGAAACAGGGCTCCTTCAGGGTCTGGCCAGCCA...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTCTTGAGGGTCCCTTTTaGTCTGCCTCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKALEGPF*SASAAA
Trigger: TGCGGCTGCAGAGGCAGATCAAAAGGGACCCTCAAG...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTCATCGAAGAACTCGATaGCAAAGGCTTGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: ACPCQASATDRAAGACCSHRRTR*QRLAGC
Trigger: ACAACCAGCAAGCCTTTGTCATCGAGTTCTTCGATG...ACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTCAGTCTTCTCTCGCTTaGGCGAGCTGGCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RWAVGWMHRTHAQKKAGLQSSLA*ASWPSV
Trigger: CACAGAGGGCCAGCTCGCTCAAGCGAGAGAAGACTG...AAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCGGGAAACCCACTTCTaGCCCCCAGGAGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: ESITSSEPVPARPPQRIGRETHF*PPGEPG
Trigger: CCCAGGTTCTCCTGGGGGTCAGAAGTGGGTTTCCCG...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCCGGGAAACCCACTTCTaGCCCCCAGGAGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLRETHF*PPGEPG
Trigger: CCCAGGTTCTCCTGGGGGTCAGAAGTGGGTTTCCCG...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GTCCCAGAGCACACCCATGCCAGCCTGGTCAATAAGGGACTGTCCCCATCCCACCGGGAAACCCACTTCTaGCCCCCAGGAGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: VPEHTHASLVNKGLSPSHRETHF*PPGEPG
Trigger: CCCAGGTTCTCCTGGGGGTCAGAAGTGGGTTTCCCG...GTGGGATGGGGACAGTCCCTTATTGACCAGGCTGGCATGGGTGTGCTCTGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCCATGGCTGCGCGCCTTaGTGTGTCTCCAGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSHGCAP*CVSRAQ
Trigger: TTGGGCCCTGGAGACACATCAAGGCGCGCAGCCATG...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGGCGGGTGCCACTGCTaGTCACCAGGAACCAAGATG +
Preference number: 4 (lower is better)
Translates to: RWAVGWMHRTHAQKKAGLGGCHC*SPGTKM
Trigger: CATCTTGGTTCCTGGTGAGCAGCAGTGGCACCCGCC...AAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAGCAGCAGGGCAGCGGTGGCGGGTGCCACTaGTGCTCACCAGGAACCAAG +
Preference number: 4 (lower is better)
Translates to: ALWLSASRSISKGQQQGSGGGCH*CSPGTK
Trigger: CTTGGTTCCTGGTGAGCAGCAGTGGCACCCGCCACC...GCTGCCCTGCTGCTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCGGTGGCGGGTGCCACTaGTGCTCACCAGGAACCAAG +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSGGGCH*CSPGTK
Trigger: CTTGGTTCCTGGTGAGCAGCAGTGGCACCCGCCACC...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GTCCCAGAGCACACCCATGCCAGCCTGGTCAATAAGGGACTGTCCCCATCCCACGGTGGCGGGTGCCACTaGTGCTCACCAGGAACCAAG +
Preference number: 4 (lower is better)
Translates to: VPEHTHASLVNKGLSPSHGGGCH*CSPGTK
Trigger: CTTGGTTCCTGGTGAGCAGCAGTGGCACCCGCCACC...GTGGGATGGGGACAGTCCCTTATTGACCAGGCTGGCATGGGTGTGCTCTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCGCCCATACAGGGGTGTaGGGTAAGCGACCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSAHTGV*GKRPPL
Trigger: CAGAGGCGGTCGCTTACCGCACACCCCTGTATGGGC...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ACAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCACCCCACCAGGAGGGCTaGCCATACAGGGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: TRQVASFLGSLGTCQTHPPHQEG*PYRGVR
Trigger: CCGCACACCCCTGTATGGGCAGCCCTCCTGGTGGGG...TGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGCTCACCATTTTGCTGTaGCAGGTCCTTGGGACGCTC +
Preference number: 4 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRLTILL*QVLGTL
Trigger: GAGCGTCCCAAGGACCTGGCACAGCAAAATGGTGAG...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCTCCCGAGAGATGGGCTaGGAGTGGGGCCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPISREMG*EWGLGS
Trigger: GCTCCCCAGGCCCCACTCGCAGCCCATCTCTCGGGA...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGCTTGGGTCGTTCTaGACCAGCCAGTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHRLGSF*TSQSAT
Trigger: GGTGGCCGACTGGCTGGTGCAGAACGACCCAAGCCT...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCAAGGCTTGGGTCGTTCTaGACCAGCCAGTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMARLGSF*TSQSAT
Trigger: GGTGGCCGACTGGCTGGTGCAGAACGACCCAAGCCT...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGAAGGTCGCTTTTGGTaGTGTGGCGGTCATCCCCGG +
Preference number: 4 (lower is better)
Translates to: RWAVGWMHRTHAQKKAGLEGRFW*CGGHPR
Trigger: CCGGGGATGACCGCCACAGCACCAAAAGCGACCTTC...AAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGACTCTGCAGCCGCACCTaGTCCCCACTGGCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRLCSRT*SPLASA
Trigger: AGCGGAGGCCAGTGGGGAGCAGGTGCGGCTGCAGAG...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTCTCTGCAGCCGCACCTaGTCCCCACTGGCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTLCSRT*SPLASA
Trigger: AGCGGAGGCCAGTGGGGAGCAGGTGCGGCTGCAGAG...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTGGGTCCCTTTTGATCTaGCTCTGCAGCCGCACCTGC +
Preference number: 4 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCGSLLI*LCSRTC
Trigger: GCAGGTGCGGCTGCAGAGGCAGATCAAAAGGGACCC...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTCGATGACAAAGGCTTaGTGGTTGTGCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWSMTKA*WLCSSS
Trigger: AGAGCTGCTGCACAACCAGCAAGCCTTTGTCATCGA...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGCGGGAGGCAAACTCTTaGAGCAAAGCCATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALREANS*SKAIRW
Trigger: CCAGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCG...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACGCCTATGAGGCAGTTTaGTGGCTCACTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHAYEAV*WLTAQL
Trigger: GAGCTGGGCAGTGAGCCAGCAAACTGCCTCATAGGC...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCGCTTTGCTCCTCCCGTaGGGCTGGGGATGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPIALLLP*GWGWWG
Trigger: CCCCCACCATCCCCAGCCGCACGGGAGGAGCAAAGC...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTAGTGTGATGTACTTCTaGTCTGGGATGCGCACATCA +
Preference number: 4 (lower is better)
Translates to: ACPCQASATDRAAGACCSSVMYF*SGMRTS
Trigger: TGATGTGCGCATCCCAGACCAGAAGTACATCACACT...ACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTACGCTCACCTGCAGCTaGCTGGTGTACTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKATLTCS*LVYFSC
Trigger: GCACGAGAAGTACACCAGCCAGCTGCAGGTGAGCGT...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACGTGCCGGTCTTCAGATaGTGCCCCACTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHVPVFR*CPTVIL
Trigger: GAGGATGACAGTGGGGCACCATCTGAAGACCGGCAC...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCGCCCTGCTGAAGGGCTaGCGGGGGCCAGTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPIALLKG*RGPVLA
Trigger: AGCCAACACTGGCCCCCGCCAGCCCTTCAGCAGGGC...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCGCCGACGCCTCGTGTTaGAAGAATATCTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: CQASATDRAAGACCSYHFADASC*KNIWHC
Trigger: GCAGTGCCAGATATTCTTCCAACACGAGGCGTCGGC...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGTCTCCAGCCACATCATaGATCTCCCTGGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLSPATS*ISLARM
Trigger: CATCCTGGCCAGGGAGATCCATGATGTGGCTGGAGA...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGGTTCAGGCTGGCCTCTaGTATACGCTGTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRVQAGL*YTLYQL
Trigger: GAGCTGGTACAGCGTATACCAGAGGCCAGCCTGAAC...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTCCAGGCGGCACTTTCTaGAAGTTCAGGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKAPGGTF*KFRLAS
Trigger: AGAGGCCAGCCTGAACTTCCAGAAAGTGCCGCCTGG...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTTTCCCAAGTCCTGGCTaGCCAGACCCTGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RWAVGWMHRTHAQKKAGLFPSPG*PDPEGA
Trigger: GGCTCCTTCAGGGTCTGGCCAGCCAGGACTTGGGAA...AAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTGCAGTTGGCCCGCTGTaGGAAGCTCCTGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSAVGPL*EAPERQ
Trigger: CTGCCTCTCAGGAGCTTCCCACAGCGGGCCAACTGC...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATATGGTGAAGGAGGCGTaGCTCTGCACCACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHMVKEA*LCTTGA
Trigger: GGCCCCTGTGGTGCAGAGCCACGCCTCCTTCACCAT...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGTGGTCTCCTTGCTaGGAGCCCGCCGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCGWSPC*EPAAGA
Trigger: TGCGCCAGCGGCGGGCTCCCAGCAAGGAGACCACCC...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACCAGGAAGGTCGCTTTTaGTGCTGTGGCGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHQEGRF*CCGGHP
Trigger: GGGATGACCGCCACAGCACCAAAAGCGACCTTCCTG...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCACCTGCTCCCCACTaGCCTCCGCTGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TRQVASFLGSLGTCQTHPAPAPH*PPLRLQ
Trigger: CTGGAGCCTCAGCGGAGGCCAGTGGGGAGCAGGTGC...TGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GTCCCAGAGCACACCCATGCCAGCCTGGTCAATAAGGGACTGTCCCCATCCCACCTGTCCCGCATGCACTaGGCCATGAAGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VPEHTHASLVNKGLSPSHLSRMH*AMKSWA
Trigger: GGCCCAGGACTTCATGGCCCAGTGCATGCGGGACAG...GTGGGATGGGGACAGTCCCTTATTGACCAGGCTGGCATGGGTGTGCTCTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCAAGGGGGTCACAGGGCTaGCTCCTCGGGGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMARGSQG*LLGVSK
Trigger: CTTTGACACCCCGAGGAGCCAGCCCTGTGACCCCCT...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCAGGGGGTCACAGGGCTaGCTCCTCGGGGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: GKWPPSWAVWGHAKPIQLRGSQG*LLGVSK
Trigger: CTTTGACACCCCGAGGAGCCAGCCCTGTGACCCCCT...GAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTTCAGCTGAGGGTCAGTaGGAGGCGGTGGGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSSAEGQ*EAVGWL
Trigger: CAACCACCCCACCGCCTCCCACTGACCCTCAGCTGA...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTCCCTTGCTGAAGGGCTaGTCTGGACTACCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: RWAVGWMHRTHAQKKAGLPLLKG*SGLPVL
Trigger: CAGGACGGGTAGTCCAGACCAGCCCTTCAGCAAGGG...AAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGAGGTCAGAGTCTCCTTaGGTGGAGCTGGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALRSESP*VELGQA
Trigger: AGCCTGACCCAGCTCCACCCAAGGAGACTCTGACCT...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAGTCCTCTGGAGGCCTaGGGGTGCTACCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLSPLEA*GCYPHH
Trigger: GTGATGGGGGTAGCACCCCCAGGCCTCCAGAGGACT...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGTGCGGCTGGGGATGGTaGGGGAGCCGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: MGWMKWFRCWLRRVWKWECGWGW*GSRWFP
Trigger: CGGAAACCAGCGGCTCCCCCACCATCCCCAGCCGCA...CTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCCGTGCGGCTGGGGATaGTGGGGGAGCCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPIPCGWG*WGSRWF
Trigger: AAACCAGCGGCTCCCCCACCATCCCCAGCCGCACGG...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACACACGCCCCACGAAGATaGGTTCACGCGGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTHAPRR*VHAGAG
Trigger: ACCGGCTCCCGCGTGAACTCATCTTCGTGGGGCGTG...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ACAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCACACGCCCCACGAAGATaGGTTCACGCGGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: TRQVASFLGSLGTCQTHPHAPRR*VHAGAG
Trigger: ACCGGCTCCCGCGTGAACTCATCTTCGTGGGGCGTG...TGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCACTGCTGTCTGCACGATaGAGCCGTAGGGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMALLSAR*SRRGQA
Trigger: AGCCTGACCCCTACGGCTTCATCGTGCAGACAGCAG...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACTTCACGAATGGCATGTaGCAGCTGGGACACCGGGTT +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHFTNGM*QLGHRV
Trigger: AACCCGGTGTCCCAGCTGTCACATGCCATTCGTGAA...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGTTCACGAATGGCATGTaGCAGCTGGGACACCGGGTT +
Preference number: 4 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALFTNGM*QLGHRV
Trigger: AACCCGGTGTCCCAGCTGTCACATGCCATTCGTGAA...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCTGGCTGGCCAGACCCTaGAGGAGCCCTGTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSWLARP*RSPVSH
Trigger: ATGGGAAACAGGGCTCCTTCAGGGTCTGGCCAGCCA...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGTGGCTGGCCAGACCCTaGAGGAGCCCTGTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ESITSSEPVPARPPQRIGWLARP*RSPVSH
Trigger: ATGGGAAACAGGGCTCCTTCAGGGTCTGGCCAGCCA...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTCTTGAGGGTCCCTTTTaGTCTGCCTCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCLEGPF*SASAAA
Trigger: TGCGGCTGCAGAGGCAGATCAAAAGGGACCCTCAAG...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGCATCGAAGAACTCGATaGCAAAGGCTTGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWHRRTR*QRLAGC
Trigger: ACAACCAGCAAGCCTTTGTCATCGAGTTCTTCGATG...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTGCATGCACTGGGCCATaGAGTCCTGGGCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLACTGP*SPGPGG
Trigger: CCCGCCTGGCCCAGGACTTCATGGCCCAGTGCATGC...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCGCATGCACTGGGCCATaGAGTCCTGGGCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLACTGP*SPGPGG
Trigger: CCCGCCTGGCCCAGGACTTCATGGCCCAGTGCATGC...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTCGTGCCTTGGTCAGCTaGGGGTCAGTGGGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTRALVS*GSVGGG
Trigger: ACCGCCTCCCACTGACCCTCAGCTGACCAAGGCACG...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ACAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCCTCGGCCGCCATCTaGCCCACTGGCATCACTGAG +
Preference number: 4 (lower is better)
Translates to: TRQVASFLGSLGTCQTHPASAAI*PTGITE
Trigger: CTCAGTGATGCCAGTGGGTCAGATGGCGGCCGAGGC...TGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCAAAGGCCATCCCTTGCTaGAGGGCTGGTCTGGACTAC +
Preference number: 4 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSKAIPC*RAGLDY
Trigger: GTAGTCCAGACCAGCCCTTCAGCAAGGGATGGCCTT...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTACCTTGACGCTCACCTaGAGCTGGCTGGTGTACTTC +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKATLTLT*SWLVYF
Trigger: GAAGTACACCAGCCAGCTGCAGGTGAGCGTCAAGGT...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTCTCACCATTTTGCTGTaGCAGGTCCTTGGGACGCTC +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKALTILL*QVLGTL
Trigger: GAGCGTCCCAAGGACCTGGCACAGCAAAATGGTGAG...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACCTCACCATTTTGCTGTaGCAGGTCCTTGGGACGCTC +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHLTILL*QVLGTL
Trigger: GAGCGTCCCAAGGACCTGGCACAGCAAAATGGTGAG...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCTCCAGCTCACCATTTTaGTGTGCCAGGTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: CQASATDRAAGACCSYHFSSSPF*CARSLG
Trigger: TCCCAAGGACCTGGCACAGCAAAATGGTGAGCTGGA...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGTCCAGCTCACCATTTTaGTGTGCCAGGTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLSSSPF*CARSLG
Trigger: TCCCAAGGACCTGGCACAGCAAAATGGTGAGCTGGA...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGTGGGCTTACGGCTGGTaGTGTAGAGCTCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGWAYGW*CRAQHC
Trigger: GCAGTGCTGAGCTCTACAGCACCAGCCGTAAGCCCA...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGGGGGCCAGTGTTGGCTaGAGTAGCAGCAGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGGASVG*SSSSLL
Trigger: AAGAAGGCTGCTGCTACTGCAGCCAACACTGGCCCC...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTCGTCCCACCAACACCTaGCTCCTGGTCTTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: RWAVGWMHRTHAQKKAGLRPTNT*LLVFCG
Trigger: CCCACAAAAGACCAGGAGGCAGGTGTTGGTGGGACG...AAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCGAAGGTCGCTTTTGGTaGTGTGGCGGTCATCCCCGG +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSEGRFW*CGGHPR
Trigger: CCGGGGATGACCGCCACAGCACCAAAAGCGACCTTC...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCCTCTGCAGCCGCACCTaGTCCCCACTGGCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLLCSRT*SPLASA
Trigger: AGCGGAGGCCAGTGGGGAGCAGGTGCGGCTGCAGAG...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTCTCCTCCTGTTTACGTaGCTTGGTCAGCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKALLLFT*LGQLRV
Trigger: GACCCTCAGCTGACCAAGGCACGTAAACAGGAGGAG...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACCTCCTCCTGTTTACGTaGCTTGGTCAGCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHLLLFT*LGQLRV
Trigger: GACCCTCAGCTGACCAAGGCACGTAAACAGGAGGAG...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCAGTTTGCTGGCTCACTaGCCAGCTCTGGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GKWPPSWAVWGHAKPIQLSLLAH*PALVAL
Trigger: CAGGGCCACCAGAGCTGGGCAGTGAGCCAGCAAACT...GAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCAGTTTGCTGGCTCACTaGCCAGCTCTGGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSSLLAH*PALVAL
Trigger: CAGGGCCACCAGAGCTGGGCAGTGAGCCAGCAAACT...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGGCCTATGAGGCAGTTTaGTGGCTCACTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGAYEAV*WLTAQL
Trigger: GAGCTGGGCAGTGAGCCAGCAAACTGCCTCATAGGC...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAGCAGCAGGGCAGCTCGAGCTTCCAGGGCTaGCAGGGCTGTCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: ALWLSASRSISKGQQQGSSSFQG*QGCLSL
Trigger: GAGACTGAGACAGCCCTGGCAGCCCTGGAAGCTCGA...GCTGCCCTGCTGCTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGTCCTTGTCGGCCTaGCAGGGTAGCCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HPTPATGLFGLVPPEASARSLSA*QGSLWG
Trigger: ACCCCAGAGGCTACCCTGGCAGGCCGACAAGGACCT...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCCCCTGTGAAGGAGCCTaGCCGCTTCCGGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLPCEGA*PLPGHG
Trigger: GCCATGCCCCGGAAGCGGGCAGGCTCCTTCACAGGG...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGAGTGTGATGTACTTCTaGTCTGGGATGCGCACATCA +
Preference number: 4 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWSVMYF*SGMRTS
Trigger: TGATGTGCGCATCCCAGACCAGAAGTACATCACACT...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTACTCCTCCTCGGAGGTaGACGTGTAATCCGAACCCT +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKATPPRR*TCNPNP
Trigger: AGGGTTCGGATTACACGTCCACCTCCGAGGAGGAGT...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGGTGGCTGTTGAGGCATaGGAGCGTGTGTGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALVAVEA*ERVCLG
Trigger: CCCTAAACACACACGCTCCCATGCCTCAACAGCCAC...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGTGGCTGTTGAGGCATaGGAGCGTGTGTGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKAVAVEA*ERVCLG
Trigger: CCCTAAACACACACGCTCCCATGCCTCAACAGCCAC...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCCCTTGGGGTCTGTGTaGCTGTTGAGGCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: ESITSSEPVPARPPQRIGPLGSV*LLRHGS
Trigger: GCTCCCATGCCTCAACAGCCACACAGACCCCAAGGG...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACTCTCCAGCCACATCATaGATCTCCCTGGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHSPATS*ISLARM
Trigger: CATCCTGGCCAGGGAGATCCATGATGTGGCTGGAGA...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGAGATGGGCTGCGAGTaGGGCCTGGGGAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCEMGCE*GLGSPV
Trigger: CACTGGGCTCCCCAGGCCCCACTCGCAGCCCATCTC...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACTTGAGGCAGGGGTGTTaGGCACATTCCCGAGAGATG +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHLRQGC*AHSREM
Trigger: CATCTCTCGGGAATGTGCCCAACACCCCTGCCTCAA...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCTTCCCGGGCTGAGATaGTTGAGGCAGGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: ESITSSEPVPARPPQRIGLPGLR*LRQGCW
Trigger: CCAACACCCCTGCCTCAACCATCTCAGCCCGGGAAG...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACGTTCAGGCTGGCCTCTaGTATACGCTGTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHVQAGL*YTLYQL
Trigger: GAGCTGGTACAGCGTATACCAGAGGCCAGCCTGAAC...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTCCAGGCGGCACTTTCTaGAAGTTCAGGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCPGGTF*KFRLAS
Trigger: AGAGGCCAGCCTGAACTTCCAGAAAGTGCCGCCTGG...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGATGGCATGTGACAGCTaGGACACCGGGTTTAGCATC +
Preference number: 4 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRMACDS*DTGFSI
Trigger: GATGCTAAACCCGGTGTCCCAGCTGTCACATGCCAT...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCATGGCATGTGACAGCTaGGACACCGGGTTTAGCATC +
Preference number: 4 (lower is better)
Translates to: CQASATDRAAGACCSYHFMACDS*DTGFSI
Trigger: GATGCTAAACCCGGTGTCCCAGCTGTCACATGCCAT...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCACCGGCGCAGCAGGCTTaGGTCGTTCTGCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: TRQVASFLGSLGTCQTHPPAQQA*VVLHQP
Trigger: TGGCTGGTGCAGAACGACCCAAGCCTGCTGCGCCGG...TGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGCACCTGCTCCCCACTaGCCTCCGCTGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCAPAPH*PPLRLQ
Trigger: CTGGAGCCTCAGCGGAGGCCAGTGGGGAGCAGGTGC...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGTGGGCCATGAAGTCCTaGGCCAGGCGGGAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQWAMKS*ARRERR
Trigger: GCGCCGCTCCCGCCTGGCCCAGGACTTCATGGCCCA...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCACTGTCCCGCATGCACTaGGCCATGAAGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HPTPATGLFGLVPPEASALSRMH*AMKSWA
Trigger: GGCCCAGGACTTCATGGCCCAGTGCATGCGGGACAG...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGCTACCTCTCCCAGCAGACAGGTCCTGTTCAGGAGCAACGCCCACACACACATCGGGGGCAGGTCTTGTaGCTGGGGAACTGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: SYLSQQTGPVQEQRPHTHRGQVL*LGNCPA
Trigger: TGCGGGACAGTTCCCCAGCCACAAGACCTGCCCCCG...ATGTGTGTGTGGGCGTTGCTCCTGAACAGGACCTGTCTGCTGGGAGAGGTAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCACTCTGCTGCTCCATCTaGGGAGCCATGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMALCCSI*GAMPGA
Trigger: AGCACCAGGCATGGCTCCCCAGATGGAGCAGCAGAG...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATCTCTGCTGCTCCATCTaGGGAGCCATGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHLCCSI*GAMPGA
Trigger: AGCACCAGGCATGGCTCCCCAGATGGAGCAGCAGAG...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCAACCCCCAGGAGAACCTaGGACCAAGAGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMATPRRT*DQEALL
Trigger: CAGCAGAGCCTCTTGGTCCCAGGTTCTCCTGGGGGT...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCACCCCCAGGAGAACCTaGGACCAAGAGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GKWPPSWAVWGHAKPIQLTPRRT*DQEALL
Trigger: CAGCAGAGCCTCTTGGTCCCAGGTTCTCCTGGGGGT...GAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTCAGCTCTGGTGGCCCTaGGCCATTCCGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCQLWWP*AIPPGS
Trigger: GCTGCCAGGCGGAATGGCCCAGGGCCACCAGAGCTG...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTTGTGGTCCTGGAGTCTaGGGTGTTGTTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RWAVGWMHRTHAQKKAGLCGPGV*GVVGLG
Trigger: TCCCAGCCCAACAACACCCCAGACTCCAGGACCACA...AAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTTGCGGCTGGGGATGGTaGGGGAGCCGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLCGWGW*GSRWFP
Trigger: CGGAAACCAGCGGCTCCCCCACCATCCCCAGCCGCA...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTCCGTGCGGCTGGGGATaGTGGGGGAGCCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLPCGWG*WGSRWF
Trigger: AAACCAGCGGCTCCCCCACCATCCCCAGCCGCACGG...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACACCCGCTTCCGGGGCATaGCCAGGATGTCCAAGCGTG +
Preference number: 4 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTPASGA*PGCPSV
Trigger: CACGCTTGGACATCCTGGCCATGCCCCGGAAGCGGG...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCCACGCCCCACGAAGATaGGTTCACGCGGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLHAPRR*VHAGAG
Trigger: ACCGGCTCCCGCGTGAACTCATCTTCGTGGGGCGTG...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp TGCCCGCACCATCTGGGACGGCAGGGGCAGGTACATGGTTTAGATCACAAAGCCCTACCACTGGGCAACTaGGGGAGCAGACGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: CPHHLGRQGQVHGLDHKALPLGN*GSRRRV
Trigger: AACTCGGCGTCTGCTCCCTCAGTTGCCCAGTGGTAG...GGCTTTGTGATCTAAACCATGTACCTGCCCCTGCCGTCCCAGATGGTGCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTCCCAGGACCCACAAATaGTTTCTTGGGGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RWAVGWMHRTHAQKKAGLPRTHK*FLGEGG
Trigger: GCCACCTTCCCCAAGAAATCATTTGTGGGTCCTGGG...AAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGACATGGCTGCGCGCCTTaGTGTGTCTCCAGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRHGCAP*CVSRAQ
Trigger: TTGGGCCCTGGAGACACATCAAGGCGCGCAGCCATG...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACAGGTGGCGGGTGCCACTaGTGCTCACCAGGAACCAAG +
Preference number: 4 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTGGGCH*CSPGTK
Trigger: CTTGGTTCCTGGTGAGCAGCAGTGGCACCCGCCACC...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGTCCTTCACCCAGTaGTCATCACGGTCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHRSFTQ*SSRSWS
Trigger: CGACCAGGACCGTGATGAGCACTGGGTGAAGGACCT...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTACCTTGACGCTCACCTaGAGCTGGCTGGTGTACTTC +
Preference number: 4 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCTLTLT*SWLVYF
Trigger: GAAGTACACCAGCCAGCTGCAGGTGAGCGTCAAGGT...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACTCCAGCTCACCATTTTaGTGTGCCAGGTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHSSSPF*CARSLG
Trigger: TCCCAAGGACCTGGCACAGCAAAATGGTGAGCTGGA...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGGGGGCCAGTGTTGGCTaGAGTAGCAGCAGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: ESITSSEPVPARPPQRIGGASVG*SSSSLL
Trigger: AAGAAGGCTGCTGCTACTGCAGCCAACACTGGCCCC...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCGGGGCCAGTGTTGGCTaGAGTAGCAGCAGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLGASVG*SSSSLL
Trigger: AAGAAGGCTGCTGCTACTGCAGCCAACACTGGCCCC...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCACGTCCCACCAACACCTaGCTCCTGGTCTTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMARPTNT*LLVFCG
Trigger: CCCACAAAAGACCAGGAGGCAGGTGTTGGTGGGACG...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCGTCCCACCAACACCTaGCTCCTGGTCTTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: GKWPPSWAVWGHAKPIQLRPTNT*LLVFCG
Trigger: CCCACAAAAGACCAGGAGGCAGGTGTTGGTGGGACG...GAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAGGGTCCCTTTTGATCTaGCTCTGCAGCCGCACCTGC +
Preference number: 4 (lower is better)
Translates to: HPTPATGLFGLVPPEASAGSLLI*LCSRTC
Trigger: GCAGGTGCGGCTGCAGAGGCAGATCAAAAGGGACCC...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGTCTGTGGTCCTGAGCTaGTGCCAGTGGCACGGACCG +
Preference number: 4 (lower is better)
Translates to: MGWMKWFRCWLRRVWKWESVVLS*CQWHGP
Trigger: CGGTCCGTGCCACTGGCAGCAGCTCAGGACCACAGA...CTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGCTCCTCCTGTTTACGTaGCTTGGTCAGCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGLLLFT*LGQLRV
Trigger: GACCCTCAGCTGACCAAGGCACGTAAACAGGAGGAG...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCACCAAGAGGCTCTGCTaGTCCATCTGGGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: GKWPPSWAVWGHAKPIQLTKRLC*SIWGAM
Trigger: CATGGCTCCCCAGATGGAGCAGCAGAGCCTCTTGGT...GAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGTTTGCTGGCTCACTaGCCAGCTCTGGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: HPTPATGLFGLVPPEASASLLAH*PALVAL
Trigger: CAGGGCCACCAGAGCTGGGCAGTGAGCCAGCAAACT...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCGCCTATGAGGCAGTTTaGTGGCTCACTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLAYEAV*WLTAQL
Trigger: GAGCTGGGCAGTGAGCCAGCAAACTGCCTCATAGGC...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACAAGGTCCTTGTCGGCCTaGCAGGGTAGCCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTRSLSA*QGSLWG
Trigger: ACCCCAGAGGCTACCCTGGCAGGCCGACAAGGACCT...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCAACGCTCACCTGCAGCTaGCTGGTGTACTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMATLTCS*LVYFSC
Trigger: GCACGAGAAGTACACCAGCCAGCTGCAGGTGAGCGT...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCTTTGTGGGCACTTCCTaGGTAGGCACCTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSFVGTS*VGTSGS
Trigger: GCTCCCTGAGGTGCCTACCCAGGAAGTGCCCACAAA...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCATTAGGGGAGCTGTGGTaGGACCCATACTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMALGELW*DPYSSS
Trigger: CGAGGAGGAGTATGGGTCCCACCACAGCTCCCCTAA...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTCATCATGGATCTCCCTaGCCAGGATGGCCACATCCT +
Preference number: 4 (lower is better)
Translates to: RWAVGWMHRTHAQKKAGLHHGSP*PGWPHP
Trigger: AGGATGTGGCCATCCTGGCCAGGGAGATCCATGATG...AAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCATTGAGGCAGGGGTGTTaGGCACATTCCCGAGAGATG +
Preference number: 4 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSLRQGC*AHSREM
Trigger: CATCTCTCGGGAATGTGCCCAACACCCCTGCCTCAA...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGATGGCATGTGACAGCTaGGACACCGGGTTTAGCATC +
Preference number: 4 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALMACDS*DTGFSI
Trigger: GATGCTAAACCCGGTGTCCCAGCTGTCACATGCCAT...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGCCGTGTTTTCACGAATaGCATGTGACAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLPCFHE*HVTAGT
Trigger: TGTCCCAGCTGTCACATGCCATTCGTGAAAACACGG...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGCCGTGTTTTCACGAATaGCATGTGACAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRPCFHE*HVTAGT
Trigger: TGTCCCAGCTGTCACATGCCATTCGTGAAAACACGG...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCCTGAGAGGCAGGGCTaGCAGCAAGGTATCCACCGA +
Preference number: 4 (lower is better)
Translates to: QGKWPPSWAVWGHAKPIQPERQG*QQGIHR
Trigger: TCGGTGGATACCTTGCTGCCAGCCCTGCCTCTCAGG...CTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGCTACCTCTCCCAGCAGACAGGTCCTGTTCAGGAGCAACGCCCACACACACATGCCAGTCGGCCACCTTaGTTTCGGCCGAGACCGTCT +
Preference number: 4 (lower is better)
Translates to: SYLSQQTGPVQEQRPHTHASRPP*FRPRPS
Trigger: AGACGGTCTCGGCCGAAACCAAGGTGGCCGACTGGC...ATGTGTGTGTGGGCGTTGCTCCTGAACAGGACCTGTCTGCTGGGAGAGGTAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGACTGTCCCGCATGCACTaGGCCATGAAGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRLSRMH*AMKSWA
Trigger: GGCCCAGGACTTCATGGCCCAGTGCATGCGGGACAG...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTCGGGGGCAGGTCTTGTaGCTGGGGAACTGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLRGQVL*LGNCPA
Trigger: TGCGGGACAGTTCCCCAGCCACAAGACCTGCCCCCG...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTTATGAGGCAGTTTGCTaGCTCACTGCCCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RWAVGWMHRTHAQKKAGLYEAVC*LTAQLW
Trigger: CCAGAGCTGGGCAGTGAGCCAGCAAACTGCCTCATA...AAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGCCACAAATGATTTCTTaGGGAAGGTGGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLPQMIS*GRWPPH
Trigger: ATGGGGAGGCCACCTTCCCCAAGAAATCATTTGTGG...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGAGGTCAGAGTCTCCTTaGGTGGAGCTGGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: ESITSSEPVPARPPQRIGRSESP*VELGQA
Trigger: AGCCTGACCCAGCTCCACCCAAGGAGACTCTGACCT...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACAAGTCCTCTGGAGGCCTaGGGGTGCTACCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTSPLEA*GCYPHH
Trigger: GTGATGGGGGTAGCACCCCCAGGCCTCCAGAGGACT...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGAGTCCTCTGGAGGCCTaGGGGTGCTACCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: MGWMKWFRCWLRRVWKWESPLEA*GCYPHH
Trigger: GTGATGGGGGTAGCACCCCCAGGCCTCCAGAGGACT...CTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCTGTGGTCCTGGAGTCTaGGGTGTTGTTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSCGPGV*GVVGLG
Trigger: TCCCAGCCCAACAACACCCCAGACTCCAGGACCACA...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGCTACCTCTCCCAGCAGACAGGTCCTGTTCAGGAGCAACGCCCACACACACATGGCCCTGGTGGGCCTTaGGGTGGACAGGCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: SYLSQQTGPVQEQRPHTHGPGGP*GGQAVR
Trigger: TCTAACAGCCTGTCCACCCCAAGGCCCACCAGGGCC...ATGTGTGTGTGGGCGTTGCTCCTGAACAGGACCTGTCTGCTGGGAGAGGTAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGCGTGTCAGTTTCTTaGCCTGCTCAGGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHSVSVS*PAQGQH
Trigger: GTGCTGCCCCTGAGCAGGCCAAGAAACTGACACGCT...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCAGCGTGTCAGTTTCTTaGCCTGCTCAGGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSSVSVS*PAQGQH
Trigger: GTGCTGCCCCTGAGCAGGCCAAGAAACTGACACGCT...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
3UTR CAA 72 bp GCCACTCTGGTAAAGCACTCGCCACAACCAACGGGATaGCTGGCCCACCTAGCTACACCCAGCCCCACTGTA +
Preference number: 4 (lower is better)
Translates to: ATLVKHSPQPTG*LAHLATPSPTV
Trigger: TACAGTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGCTTTACCAGAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGTGGGCGCAGAGACCTTaGCGCTCACCTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQWAQRP*RSPAAG
Trigger: GCCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCA...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACTTCTGGTCCAAGTTGTaGGAGTTCATAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHFWSKL*EFIEPG
Trigger: GCCTGGCTCTATGAACTCTCACAACTTGGACCAGAA...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGCCTTCAGGATGGAGCTaGTTTCCTTGTTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLPSGWS*FPCWMS
Trigger: AGACATCCAACAAGGAAATCAGCTCCATCCTGAAGG...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTTGGCTGGCCAGACCCTaGAGGAGCCCTGTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTWLARP*RSPVSH
Trigger: ATGGGAAACAGGGCTCCTTCAGGGTCTGGCCAGCCA...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTCAGTCTTCTCTCGCTTaGGCGAGCTGGCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTQSSLA*ASWPSV
Trigger: CACAGAGGGCCAGCTCGCTCAAGCGAGAGAAGACTG...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AGCTACCTCTCCCAGCAGACAGGTCCTGTTCAGGAGCAACGCCCACACACACATCTACCACTGGGCAACTaGGGGAGCAGACGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: SYLSQQTGPVQEQRPHTHLPLGN*GSRRRV
Trigger: AACTCGGCGTCTGCTCCCTCAGTTGCCCAGTGGTAG...ATGTGTGTGTGGGCGTTGCTCCTGAACAGGACCTGTCTGCTGGGAGAGGTAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAAGGCCATCCCTTGCTaGAGGGCTGGTCTGGACTAC +
Preference number: 4 (lower is better)
Translates to: HPTPATGLFGLVPPEASAKAIPC*RAGLDY
Trigger: GTAGTCCAGACCAGCCCTTCAGCAAGGGATGGCCTT...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp TGCCCGCACCATCTGGGACGGCAGGGGCAGGTACATGGTTTAGATCACAAAGCCAAGGCCATCCCTTGCTaGAGGGCTGGTCTGGACTAC +
Preference number: 4 (lower is better)
Translates to: CPHHLGRQGQVHGLDHKAKAIPC*RAGLDY
Trigger: GTAGTCCAGACCAGCCCTTCAGCAAGGGATGGCCTT...GGCTTTGTGATCTAAACCATGTACCTGCCCCTGCCGTCCCAGATGGTGCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCATCAGGTGGGTGTCCTaGGCGTGGAAGTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPIIRWVS*AWKSRR
Trigger: ACGCCTGGACTTCCACGCTCAGGACACCCACCTGAT...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGATCAGGTGGGTGTCCTaGGCGTGGAAGTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: MGWMKWFRCWLRRVWKWEIRWVS*AWKSRR
Trigger: ACGCCTGGACTTCCACGCTCAGGACACCCACCTGAT...CTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GTCCCAGAGCACACCCATGCCAGCCTGGTCAATAAGGGACTGTCCCCATCCCACACCTTGACGCTCACCTaGAGCTGGCTGGTGTACTTC +
Preference number: 4 (lower is better)
Translates to: VPEHTHASLVNKGLSPSHTLTLT*SWLVYF
Trigger: GAAGTACACCAGCCAGCTGCAGGTGAGCGTCAAGGT...GTGGGATGGGGACAGTCCCTTATTGACCAGGCTGGCATGGGTGTGCTCTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTGCCCATACAGGGGTGTaGGGTAAGCGACCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLAHTGV*GKRPPL
Trigger: CAGAGGCGGTCGCTTACCGCACACCCCTGTATGGGC...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAGGGGCCAGTGTTGGCTaGAGTAGCAGCAGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: HPTPATGLFGLVPPEASAGASVG*SSSSLL
Trigger: AAGAAGGCTGCTGCTACTGCAGCCAACACTGGCCCC...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGTCACCTTGCCTGGACTaGAGTCATCAAACTCAATGG +
Preference number: 4 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRSPCLD*SHQTQW
Trigger: CCATTGAGTTTGATGACTGCAGTCCAGGCAAGGTGA...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGAGAAGGTCGCTTTTGGTaGTGTGGCGGTCATCCCCGG +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMREGRFW*CGGHPR
Trigger: CCGGGGATGACCGCCACAGCACCAAAAGCGACCTTC...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGACCAAGAGGCTCTGCTaGTCCATCTGGGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: QGKWPPSWAVWGHAKPIQTKRLC*SIWGAM
Trigger: CATGGCTCCCCAGATGGAGCAGCAGAGCCTCTTGGT...CTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGTCGAGCTTCCAGGGCTaGCAGGGCTGTCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: MGWMKWFRCWLRRVWKWESSFQG*QGCLSL
Trigger: GAGACTGAGACAGCCCTGGCAGCCCTGGAAGCTCGA...CTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp TGCCCGCACCATCTGGGACGGCAGGGGCAGGTACATGGTTTAGATCACAAAGCCAGGGGCAGCACGATTTaGTGGTTCAGGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CPHHLGRQGQVHGLDHKARGSTI*WFRVGC
Trigger: GCAGCCAACCCTGAACCAGCAAATCGTGCTGCCCCT...GGCTTTGTGATCTAAACCATGTACCTGCCCCTGCCGTCCCAGATGGTGCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGAGTGTGATGTACTTCTaGTCTGGGATGCGCACATCA +
Preference number: 4 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLSVMYF*SGMRTS
Trigger: TGATGTGCGCATCCCAGACCAGAAGTACATCACACT...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTACTCCTCCTCGGAGGTaGACGTGTAATCCGAACCCT +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSTPPRR*TCNPNP
Trigger: AGGGTTCGGATTACACGTCCACCTCCGAGGAGGAGT...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAGCAGCAGGGCAGCACTCCTCCTCGGAGGTaGACGTGTAATCCGAACCCT +
Preference number: 4 (lower is better)
Translates to: ALWLSASRSISKGQQQGSTPPRR*TCNPNP
Trigger: AGGGTTCGGATTACACGTCCACCTCCGAGGAGGAGT...GCTGCCCTGCTGCTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCTCTCCAGCCACATCATaGATCTCCCTGGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSSPATS*ISLARM
Trigger: CATCCTGGCCAGGGAGATCCATGATGTGGCTGGAGA...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGTCTCCAGCCACATCATaGATCTCCCTGGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ESITSSEPVPARPPQRIGSPATS*ISLARM
Trigger: CATCCTGGCCAGGGAGATCCATGATGTGGCTGGAGA...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATTTGAGGCAGGGGTGTTaGGCACATTCCCGAGAGATG +
Preference number: 4 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHLRQGC*AHSREM
Trigger: CATCTCTCGGGAATGTGCCCAACACCCCTGCCTCAA...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTCTTCCCGGGCTGAGATaGTTGAGGCAGGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTLPGLR*LRQGCW
Trigger: CCAACACCCCTGCCTCAACCATCTCAGCCCGGGAAG...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCAGTTCAGGCTGGCCTCTaGTATACGCTGTACCAGCTC +
Preference number: 4 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMAVQAGL*YTLYQL
Trigger: GAGCTGGTACAGCGTATACCAGAGGCCAGCCTGAAC...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACCCGTGTTTTCACGAATaGCATGTGACAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHPCFHE*HVTAGT
Trigger: TGTCCCAGCTGTCACATGCCATTCGTGAAAACACGG...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCTTCCCAAGTCCTGGCTaGCCAGACCCTGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPIFPSPG*PDPEGA
Trigger: GGCTCCTTCAGGGTCTGGCCAGCCAGGACTTGGGAA...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACATTCCCAAGTCCTGGCTaGCCAGACCCTGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTFPSPG*PDPEGA
Trigger: GGCTCCTTCAGGGTCTGGCCAGCCAGGACTTGGGAA...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGACCTGAGAGGCAGGGCTaGCAGCAAGGTATCCACCGA +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRPERQG*QQGIHR
Trigger: TCGGTGGATACCTTGCTGCCAGCCCTGCCTCTCAGG...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGCAGTTGGCCCGCTGTaGGAAGCTCCTGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCAVGPL*EAPERQ
Trigger: CTGCCTCTCAGGAGCTTCCCACAGCGGGCCAACTGC...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTATGGTGAAGGAGGCGTaGCTCTGCACCACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCMVKEA*LCTTGA
Trigger: GGCCCCTGTGGTGCAGAGCCACGCCTCCTTCACCAT...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCTATGAGGCAGTTTGCTaGCTCACTGCCCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSYEAVC*LTAQLW
Trigger: CCAGAGCTGGGCAGTGAGCCAGCAAACTGCCTCATA...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCGGGTCCAGGTCTTCCTaGCCTATGAGGCAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLGSRSS*PMRQFA
Trigger: AGCAAACTGCCTCATAGGCCAGGAAGACCTGGACCC...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATGGGTCCAGGTCTTCCTaGCCTATGAGGCAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHGSRSS*PMRQFA
Trigger: AGCAAACTGCCTCATAGGCCAGGAAGACCTGGACCC...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGACCCTTGCTGAAGGGCTaGTCTGGACTACCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRPLLKG*SGLPVL
Trigger: CAGGACGGGTAGTCCAGACCAGCCCTTCAGCAAGGG...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCCCGCACCATCTGGGACGGCAGGGGCAGGTACATGGTTTAGATCACAAAGCCAGGTCAGAGTCTCCTTaGGTGGAGCTGGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: CPHHLGRQGQVHGLDHKARSESP*VELGQA
Trigger: AGCCTGACCCAGCTCCACCCAAGGAGACTCTGACCT...GGCTTTGTGATCTAAACCATGTACCTGCCCCTGCCGTCCCAGATGGTGCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCTCCTTCTGTGGTCCTaGAGTCTGGGGTGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GKWPPSWAVWGHAKPIQLLLLWS*SLGCCW
Trigger: CCAACAACACCCCAGACTCCAGGACCACAGAAGGAG...GAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAGCAGCAGGGCAGCCTCCTTCTGTGGTCCTaGAGTCTGGGGTGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: ALWLSASRSISKGQQQGSLLLWS*SLGCCW
Trigger: CCAACAACACCCCAGACTCCAGGACCACAGAAGGAG...GCTGCCCTGCTGCTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GTCCCAGAGCACACCCATGCCAGCCTGGTCAATAAGGGACTGTCCCCATCCCACAGCACCCCCTGGGTCTaGTACTGTTGGTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: VPEHTHASLVNKGLSPSHSTPWV*YCWWRQ
Trigger: TTGTCTCCACCAACAGTACCAGACCCAGGGGGTGCT...GTGGGATGGGGACAGTCCCTTATTGACCAGGCTGGCATGGGTGTGCTCTGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGCACCCCCTGGGTCTaGTACTGTTGGTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHSTPWV*YCWWRQ
Trigger: TTGTCTCCACCAACAGTACCAGACCCAGGGGGTGCT...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCTTAGAACTGGGCAAGTaGGCAAGGCCAGAACCTCGC +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSLELGK*ARPEPR
Trigger: GCGAGGTTCTGGCCTTGCCCACTTGCCCAGTTCTAA...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GTCCCAGAGCACACCCATGCCAGCCTGGTCAATAAGGGACTGTCCCCATCCCACTTAGAACTGGGCAAGTaGGCAAGGCCAGAACCTCGC +
Preference number: 4 (lower is better)
Translates to: VPEHTHASLVNKGLSPSHLELGK*ARPEPR
Trigger: GCGAGGTTCTGGCCTTGCCCACTTGCCCAGTTCTAA...GTGGGATGGGGACAGTCCCTTATTGACCAGGCTGGCATGGGTGTGCTCTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCTGCCAGGGTAGCCTCTaGGGTCTCGTGGTTAGAACT +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSCQGSL*GLVVRT
Trigger: AGTTCTAACCACGAGACCCCAGAGGCTACCCTGGCA...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCTGCCAGGGTAGCCTCTaGGGTCTCGTGGTTAGAACT +
Preference number: 4 (lower is better)
Translates to: GKWPPSWAVWGHAKPIQLCQGSL*GLVVRT
Trigger: AGTTCTAACCACGAGACCCCAGAGGCTACCCTGGCA...GAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATTGCCAGGGTAGCCTCTaGGGTCTCGTGGTTAGAACT +
Preference number: 4 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHCQGSL*GLVVRT
Trigger: AGTTCTAACCACGAGACCCCAGAGGCTACCCTGGCA...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTCTGCTGTCTGCACGATaGAGCCGTAGGGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLLLSAR*SRRGQA
Trigger: AGCCTGACCCCTACGGCTTCATCGTGCAGACAGCAG...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTCTGCTGTCTGCACGATaGAGCCGTAGGGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCLLSAR*SRRGQA
Trigger: AGCCTGACCCCTACGGCTTCATCGTGCAGACAGCAG...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTTTCTGGTCCAAGTTGTaGGAGTTCATAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RWAVGWMHRTHAQKKAGLFWSKL*EFIEPG
Trigger: GCCTGGCTCTATGAACTCTCACAACTTGGACCAGAA...AAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTTCATTCTCAGAGTTaGTTCTGGCCTCTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: CQASATDRAAGACCSYHFLHSQS*FWPLSP
Trigger: AGGACTTAGAGGCCAGAATCAACTCTGAGAATGAAG...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTCTACCACTGGGCAACTaGGGGAGCAGACGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCLPLGN*GSRRRV
Trigger: AACTCGGCGTCTGCTCCCTCAGTTGCCCAGTGGTAG...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGTTGATGACGGCATGCTaGTTGTCCACACTACGGGAC +
Preference number: 4 (lower is better)
Translates to: ESITSSEPVPARPPQRIGLMTAC*LSTLRD
Trigger: GTCCCGTAGTGTGGACAAGCAGCATGCCGTCATCAA...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTAGGTCCTTCACCCAGTaGTCATCACGGTCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTRSFTQ*SSRSWS
Trigger: CGACCAGGACCGTGATGAGCACTGGGTGAAGGACCT...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AGCTACCTCTCCCAGCAGACAGGTCCTGTTCAGGAGCAACGCCCACACACACATAGGTCCTTCACCCAGTaGTCATCACGGTCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: SYLSQQTGPVQEQRPHTHRSFTQ*SSRSWS
Trigger: CGACCAGGACCGTGATGAGCACTGGGTGAAGGACCT...ATGTGTGTGTGGGCGTTGCTCCTGAACAGGACCTGTCTGCTGGGAGAGGTAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGACCTTGACGCTCACCTaGAGCTGGCTGGTGTACTTC +
Preference number: 4 (lower is better)
Translates to: QGKWPPSWAVWGHAKPIQTLTLT*SWLVYF
Trigger: GAAGTACACCAGCCAGCTGCAGGTGAGCGTCAAGGT...CTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGGCCCATACAGGGGTGTaGGGTAAGCGACCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQAHTGV*GKRPPL
Trigger: CAGAGGCGGTCGCTTACCGCACACCCCTGTATGGGC...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCTCCAGCTCACCATTTTaGTGTGCCAGGTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLSSSPF*CARSLG
Trigger: TCCCAAGGACCTGGCACAGCAAAATGGTGAGCTGGA...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGATGGGCTTACGGCTGGTaGTGTAGAGCTCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRWAYGW*CRAQHC
Trigger: GCAGTGCTGAGCTCTACAGCACCAGCCGTAAGCCCA...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTAATCTCTGCGATCTCTaGTGTCTGCACGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCNLCDL*CLHDEA
Trigger: GGCTTCATCGTGCAGACAGCAGAGATCGCAGAGATT...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTTCACCTTGCCTGGACTaGAGTCATCAAACTCAATGG +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKASPCLD*SHQTQW
Trigger: CCATTGAGTTTGATGACTGCAGTCCAGGCAAGGTGA...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACACCGAGTCGCTCTGTGTaGCATCCTCATGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTPSRSV*HPHACG
Trigger: GCCACAAGCATGAGGATGGCACACAGAGCGACTCGG...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCGGGAGGCAAACTCTTaGAGCAAAGCCATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPIREANS*SKAIRW
Trigger: CCAGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCG...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACACGGGAGGCAAACTCTTaGAGCAAAGCCATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTREANS*SKAIRW
Trigger: CCAGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCG...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AGCTACCTCTCCCAGCAGACAGGTCCTGTTCAGGAGCAACGCCCACACACACATACCAAGAGGCTCTGCTaGTCCATCTGGGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: SYLSQQTGPVQEQRPHTHTKRLC*SIWGAM
Trigger: CATGGCTCCCCAGATGGAGCAGCAGAGCCTCTTGGT...ATGTGTGTGTGGGCGTTGCTCCTGAACAGGACCTGTCTGCTGGGAGAGGTAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ACAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAAGGGGCAGCACGATTTaGTGGTTCAGGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TRQVASFLGSLGTCQTHPRGSTI*WFRVGC
Trigger: GCAGCCAACCCTGAACCAGCAAATCGTGCTGCCCCT...TGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACAACGCTCACCTGCAGCTaGCTGGTGTACTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTTLTCS*LVYFSC
Trigger: GCACGAGAAGTACACCAGCCAGCTGCAGGTGAGCGT...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCCCGCACCATCTGGGACGGCAGGGGCAGGTACATGGTTTAGATCACAAAGCCGCCGACGCCTCGTGTTaGAAGAATATCTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: CPHHLGRQGQVHGLDHKAADASC*KNIWHC
Trigger: GCAGTGCCAGATATTCTTCCAACACGAGGCGTCGGC...GGCTTTGTGATCTAAACCATGTACCTGCCCCTGCCGTCCCAGATGGTGCGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGTTAGGGGAGCTGTGGTaGGACCCATACTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: MGWMKWFRCWLRRVWKWELGELW*DPYSSS
Trigger: CGAGGAGGAGTATGGGTCCCACCACAGCTCCCCTAA...CTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACATTAGGGGAGCTGTGGTaGGACCCATACTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTLGELW*DPYSSS
Trigger: CGAGGAGGAGTATGGGTCCCACCACAGCTCCCCTAA...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTCTTCCCGGGCTGAGATaGTTGAGGCAGGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLLPGLR*LRQGCW
Trigger: CCAACACCCCTGCCTCAACCATCTCAGCCCGGGAAG...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTCCAGGCGGCACTTTCTaGAAGTTCAGGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTPGGTF*KFRLAS
Trigger: AGAGGCCAGCCTGAACTTCCAGAAAGTGCCGCCTGG...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTATGGCATGTGACAGCTaGGACACCGGGTTTAGCATC +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSMACDS*DTGFSI
Trigger: GATGCTAAACCCGGTGTCCCAGCTGTCACATGCCAT...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTTTCCCAAGTCCTGGCTaGCCAGACCCTGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLFPSPG*PDPEGA
Trigger: GGCTCCTTCAGGGTCTGGCCAGCCAGGACTTGGGAA...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGATGGTGAAGGAGGCGTaGCTCTGCACCACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQMVKEA*LCTTGA
Trigger: GGCCCCTGTGGTGCAGAGCCACGCCTCCTTCACCAT...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGCTACCTCTCCCAGCAGACAGGTCCTGTTCAGGAGCAACGCCCACACACACATCAGGAAGGTCGCTTTTaGTGCTGTGGCGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: SYLSQQTGPVQEQRPHTHQEGRF*CCGGHP
Trigger: GGGATGACCGCCACAGCACCAAAAGCGACCTTCCTG...ATGTGTGTGTGGGCGTTGCTCCTGAACAGGACCTGTCTGCTGGGAGAGGTAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTCAGGAAGGTCGCTTTTaGTGCTGTGGCGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTQEGRF*CCGGHP
Trigger: GGGATGACCGCCACAGCACCAAAAGCGACCTTCCTG...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCAAACACTCCAAAAACCTaGTCGATCATCCTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSNTPKT*SIILRA
Trigger: GGCTCGGAGGATGATCGACCAGGTTTTTGGAGTGTT...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTACCCCCAGGAGAACCTaGGACCAAGAGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLTPRRT*DQEALL
Trigger: CAGCAGAGCCTCTTGGTCCCAGGTTCTCCTGGGGGT...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGTATGAGGCAGTTTGCTaGCTCACTGCCCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QGKWPPSWAVWGHAKPIQYEAVC*LTAQLW
Trigger: CCAGAGCTGGGCAGTGAGCCAGCAAACTGCCTCATA...CTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAGGGTCCAGGTCTTCCTaGCCTATGAGGCAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: HPTPATGLFGLVPPEASAGSRSS*PMRQFA
Trigger: AGCAAACTGCCTCATAGGCCAGGAAGACCTGGACCC...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTCCCTTGCTGAAGGGCTaGTCTGGACTACCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCPLLKG*SGLPVL
Trigger: CAGGACGGGTAGTCCAGACCAGCCCTTCAGCAAGGG...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGATGTGGTCCTGGAGTCTaGGGTGTTGTTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRCGPGV*GVVGLG
Trigger: TCCCAGCCCAACAACACCCCAGACTCCAGGACCACA...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCTGTGGTCCTGGAGTCTaGGGTGTTGTTGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPICGPGV*GVVGLG
Trigger: TCCCAGCCCAACAACACCCCAGACTCCAGGACCACA...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATTGGGTCTGGTACTGTTaGTGGAGACAATGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHWVWYC*WRQWAL
Trigger: GAGAGCCCATTGTCTCCACCAACAGTACCAGACCCA...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCTGGGTCTGGTACTGTTaGTGGAGACAATGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLWVWYC*WRQWAL
Trigger: GAGAGCCCATTGTCTCCACCAACAGTACCAGACCCA...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGAAGCGTGTCAGTTTCTTaGCCTGCTCAGGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRSVSVS*PAQGQH
Trigger: GTGCTGCCCCTGAGCAGGCCAAGAAACTGACACGCT...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCCCTTGGGGTCTGTGTaGTGGAAGAATATCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSPLGSV*WKNIWH
Trigger: GTGCCAGATATTCTTCCACCACACAGACCCCAAGGG...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220627.2
3UTR CAA 72 bp GTTTGGGGACATGCCAAACCCATCCAGCTCCTGTGTTaGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: VWGHAKPIQLLC*ALTGPRVQLLS
Trigger: AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGGTTTGGCATGTCCCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCTCACAAATGTCCCATTaGGACTGCCCAGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSSQMSH*DCPGPS
Trigger: TGAAGGACCTGGGCAGTCTCAATGGGACATTTGTGA...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTTCACAAATGTCCCATTaGGACTGCCCAGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSSQMSH*DCPGPS
Trigger: TGAAGGACCTGGGCAGTCTCAATGGGACATTTGTGA...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACATGGGCGCAGAGACCTTaGCGCTCACCTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTWAQRP*RSPAAG
Trigger: GCCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGTTCTGGTCCAAGTTGTaGGAGTTCATAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ESITSSEPVPARPPQRIGFWSKL*EFIEPG
Trigger: GCCTGGCTCTATGAACTCTCACAACTTGGACCAGAA...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGTTCACGAATGGCATGTaGCAGCTGGGACACCGGGTT +
Preference number: 4 (lower is better)
Translates to: MGWMKWFRCWLRRVWKWEFTNGM*QLGHRV
Trigger: AACCCGGTGTCCCAGCTGTCACATGCCATTCGTGAA...CTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCACCTTCAGGATGGAGCTaGTTTCCTTGTTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSPSGWS*FPCWMS
Trigger: AGACATCCAACAAGGAAATCAGCTCCATCCTGAAGG...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTCATTCTGATCACCAATaGAGAAAGAGGTGGGGACTA +
Preference number: 4 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKAHSDHQ*RKRWGL
Trigger: TAGTCCCCACCTCTTTCTTCATTGGTGATCAGAATG...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCAGGTCCTTCACCCAGTaGTCATCACGGTCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLRSFTQ*SSRSWS
Trigger: CGACCAGGACCGTGATGAGCACTGGGTGAAGGACCT...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTAGGTCCTTCACCCAGTaGTCATCACGGTCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCRSFTQ*SSRSWS
Trigger: CGACCAGGACCGTGATGAGCACTGGGTGAAGGACCT...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGACTTCTGGTCTGGGATaGGCACATCATTCACAAATG +
Preference number: 4 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALTSGLG*AHHSQM
Trigger: CATTTGTGAATGATGTGCGCATCCCAGACCAGAAGT...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGACTCACCATTTTGCTGTaGCAGGTCCTTGGGACGCTC +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRLTILL*QVLGTL
Trigger: GAGCGTCCCAAGGACCTGGCACAGCAAAATGGTGAG...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGTCACCTTGCCTGGACTaGAGTCATCAAACTCAATGG +
Preference number: 4 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGSPCLD*SHQTQW
Trigger: CCATTGAGTTTGATGACTGCAGTCCAGGCAAGGTGA...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCTCGATGACAAAGGCTTaGTGGTTGTGCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSSMTKA*WLCSSS
Trigger: AGAGCTGCTGCACAACCAGCAAGCCTTTGTCATCGA...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGCTCCTCCTGTTTACGTaGCTTGGTCAGCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: MGWMKWFRCWLRRVWKWELLLFT*LGQLRV
Trigger: GACCCTCAGCTGACCAAGGCACGTAAACAGGAGGAG...CTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGCCTATGAGGCAGTTTaGTGGCTCACTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCAYEAV*WLTAQL
Trigger: GAGCTGGGCAGTGAGCCAGCAAACTGCCTCATAGGC...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTAGGGGCAGCACGATTTaGTGGTTCAGGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLRGSTI*WFRVGC
Trigger: GCAGCCAACCCTGAACCAGCAAATCGTGCTGCCCCT...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGCTAACACGTACATGTTaGAATCATAGCCAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRLTRTC*NHSQSG
Trigger: TCCGCTTTGGCTATGATTCCAACATGTACGTGTTAG...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGCTAACACGTACATGTTaGAATCATAGCCAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLLTRTC*NHSQSG
Trigger: TCCGCTTTGGCTATGATTCCAACATGTACGTGTTAG...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCGTGCCGGTCTTCAGATaGTGCCCCACTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLVPVFR*CPTVIL
Trigger: GAGGATGACAGTGGGGCACCATCTGAAGACCGGCAC...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGTGCCGGTCTTCAGATaGTGCCCCACTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCVPVFR*CPTVIL
Trigger: GAGGATGACAGTGGGGCACCATCTGAAGACCGGCAC...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCCGACGCCTCGTGTTaGAAGAATATCTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: MGWMKWFRCWLRRVWKWEADASC*KNIWHC
Trigger: GCAGTGCCAGATATTCTTCCAACACGAGGCGTCGGC...CTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCGTGGCTGTTGAGGCATaGGAGCGTGTGTGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPIVAVEA*ERVCLG
Trigger: CCCTAAACACACACGCTCCCATGCCTCAACAGCCAC...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCACATCATGGATCTCCCTaGCCAGGATGGCCACATCCT +
Preference number: 4 (lower is better)
Translates to: TRQVASFLGSLGTCQTHPHHGSP*PGWPHP
Trigger: AGGATGTGGCCATCCTGGCCAGGGAGATCCATGATG...TGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCTGGATGTCTTCAGGATaGGTACTTCATTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: CQASATDRAAGACCSYHFWMSSG*VLHSQS
Trigger: ACTCTGAGAATGAAGTACCCATCCTGAAGACATCCA...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAGCAGCAGGGCAGCGTGTGTGTAAAGGACTaGGAGCGTTTCTTACGGGGT +
Preference number: 4 (lower is better)
Translates to: ALWLSASRSISKGQQQGSVCVKD*ERFLRG
Trigger: ACCCCGTAAGAAACGCTCCCAGTCCTTTACACACAC...GCTGCCCTGCTGCTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGTATGAGGCAGTTTGCTaGCTCACTGCCCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: MGWMKWFRCWLRRVWKWEYEAVC*LTAQLW
Trigger: CCAGAGCTGGGCAGTGAGCCAGCAAACTGCCTCATA...CTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGACTCCTTCTGTGGTCCTaGAGTCTGGGGTGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRLLLWS*SLGCCW
Trigger: CCAACAACACCCCAGACTCCAGGACCACAGAAGGAG...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACAAGCACCCCCTGGGTCTaGTACTGTTGGTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTSTPWV*YCWWRQ
Trigger: TTGTCTCCACCAACAGTACCAGACCCAGGGGGTGCT...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCAGCACCCCCTGGGTCTaGTACTGTTGGTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPISTPWV*YCWWRQ
Trigger: TTGTCTCCACCAACAGTACCAGACCCAGGGGGTGCT...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGCTACCTCTCCCAGCAGACAGGTCCTGTTCAGGAGCAACGCCCACACACACATTTAGAACTGGGCAAGTaGGCAAGGCCAGAACCTCGC +
Preference number: 4 (lower is better)
Translates to: SYLSQQTGPVQEQRPHTHLELGK*ARPEPR
Trigger: GCGAGGTTCTGGCCTTGCCCACTTGCCCAGTTCTAA...ATGTGTGTGTGGGCGTTGCTCCTGAACAGGACCTGTCTGCTGGGAGAGGTAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACACCCGCTTCCGGGGCATaGCCAGGATGTCCAAGCGTG +
Preference number: 4 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTPASGA*PGCPSV
Trigger: CACGCTTGGACATCCTGGCCATGCCCCGGAAGCGGG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCTTCACGAATGGCATGTaGCAGCTGGGACACCGGGTT +
Preference number: 4 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLFTNGM*QLGHRV
Trigger: AACCCGGTGTCCCAGCTGTCACATGCCATTCGTGAA...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCACCTTCAGGATGGAGCTaGTTTCCTTGTTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMAPSGWS*FPCWMS
Trigger: AGACATCCAACAAGGAAATCAGCTCCATCCTGAAGG...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCATCGAAGAACTCGATaGCAAAGGCTTGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: ESITSSEPVPARPPQRIGHRRTR*QRLAGC
Trigger: ACAACCAGCAAGCCTTTGTCATCGAGTTCTTCGATG...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCACATTCTGATCACCAATaGAGAAAGAGGTGGGGACTA +
Preference number: 4 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSHSDHQ*RKRWGL
Trigger: TAGTCCCCACCTCTTTCTTCATTGGTGATCAGAATG...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGTTGATGACGGCATGCTaGTTGTCCACACTACGGGAC +
Preference number: 4 (lower is better)
Translates to: MGWMKWFRCWLRRVWKWELMTAC*LSTLRD
Trigger: GTCCCGTAGTGTGGACAAGCAGCATGCCGTCATCAA...CTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTTTGATGACGGCATGCTaGTTGTCCACACTACGGGAC +
Preference number: 4 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTLMTAC*LSTLRD
Trigger: GTCCCGTAGTGTGGACAAGCAGCATGCCGTCATCAA...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTACTTCTGGTCTGGGATaGGCACATCATTCACAAATG +
Preference number: 4 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCTSGLG*AHHSQM
Trigger: CATTTGTGAATGATGTGCGCATCCCAGACCAGAAGT...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTACCTTGACGCTCACCTaGAGCTGGCTGGTGTACTTC +
Preference number: 4 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLTLTLT*SWLVYF
Trigger: GAAGTACACCAGCCAGCTGCAGGTGAGCGTCAAGGT...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTCTCACCATTTTGCTGTaGCAGGTCCTTGGGACGCTC +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCLTILL*QVLGTL
Trigger: GAGCGTCCCAAGGACCTGGCACAGCAAAATGGTGAG...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGTCCAGCTCACCATTTTaGTGTGCCAGGTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: MGWMKWFRCWLRRVWKWESSSPF*CARSLG
Trigger: TCCCAAGGACCTGGCACAGCAAAATGGTGAGCTGGA...CTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGTGGGCTTACGGCTGGTaGTGTAGAGCTCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQWAYGW*CRAQHC
Trigger: GCAGTGCTGAGCTCTACAGCACCAGCCGTAAGCCCA...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGACCAAGAGGCTCTGCTaGTCCATCTGGGGAGCCATG +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQTKRLC*SIWGAM
Trigger: CATGGCTCCCCAGATGGAGCAGCAGAGCCTCTTGGT...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCGATGTACTTCTGGTCTaGGATGCGCACATCATTCAC +
Preference number: 4 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLDVLLV*DAHIIH
Trigger: GTGAATGATGTGCGCATCCCAGACCAGAAGTACATC...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCAAGTGTGATGTACTTCTaGTCTGGGATGCGCACATCA +
Preference number: 4 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMASVMYF*SGMRTS
Trigger: TGATGTGCGCATCCCAGACCAGAAGTACATCACACT...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGGTGCCGGTCTTCAGATaGTGCCCCACTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQVPVFR*CPTVIL
Trigger: GAGGATGACAGTGGGGCACCATCTGAAGACCGGCAC...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTCATCATGGATCTCCCTaGCCAGGATGGCCACATCCT +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCHHGSP*PGWPHP
Trigger: AGGATGTGGCCATCCTGGCCAGGGAGATCCATGATG...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTCATCATGGATCTCCCTaGCCAGGATGGCCACATCCT +
Preference number: 4 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLHHGSP*PGWPHP
Trigger: AGGATGTGGCCATCCTGGCCAGGGAGATCCATGATG...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGTGGATGTCTTCAGGATaGGTACTTCATTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALWMSSG*VLHSQS
Trigger: ACTCTGAGAATGAAGTACCCATCCTGAAGACATCCA...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACTGGATGTCTTCAGGATaGGTACTTCATTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHWMSSG*VLHSQS
Trigger: ACTCTGAGAATGAAGTACCCATCCTGAAGACATCCA...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCTGGGTCTGGTACTGTTaGTGGAGACAATGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPIWVWYC*WRQWAL
Trigger: GAGAGCCCATTGTCTCCACCAACAGTACCAGACCCA...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCTTAGAACTGGGCAAGTaGGCAAGGCCAGAACCTCGC +
Preference number: 4 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLLELGK*ARPEPR
Trigger: GCGAGGTTCTGGCCTTGCCCACTTGCCCAGTTCTAA...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACAGGCCCTGGTGGGCCTTaGGGTGGACAGGCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTGPGGP*GGQAVR
Trigger: TCTAACAGCCTGTCCACCCCAAGGCCCACCAGGGCC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGATCACAAATGTCCCATTaGGACTGCCCAGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRSQMSH*DCPGPS
Trigger: TGAAGGACCTGGGCAGTCTCAATGGGACATTTGTGA...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ACAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCATTCTGGTCCAAGTTGTaGGAGTTCATAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TRQVASFLGSLGTCQTHPFWSKL*EFIEPG
Trigger: GCCTGGCTCTATGAACTCTCACAACTTGGACCAGAA...TGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGTTCTGGTCCAAGTTGTaGGAGTTCATAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: MGWMKWFRCWLRRVWKWEFWSKL*EFIEPG
Trigger: GCCTGGCTCTATGAACTCTCACAACTTGGACCAGAA...CTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAGCAGCAGGGCAGCCTTCATTCTCAGAGTTaGTTCTGGCCTCTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: ALWLSASRSISKGQQQGSLHSQS*FWPLSP
Trigger: AGGACTTAGAGGCCAGAATCAACTCTGAGAATGAAG...GCTGCCCTGCTGCTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTTCATTCTCAGAGTTaGTTCTGGCCTCTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSLHSQS*FWPLSP
Trigger: AGGACTTAGAGGCCAGAATCAACTCTGAGAATGAAG...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp TGCCCGCACCATCTGGGACGGCAGGGGCAGGTACATGGTTTAGATCACAAAGCCCCTTCAGGATGGAGCTaGTTTCCTTGTTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: CPHHLGRQGQVHGLDHKAPSGWS*FPCWMS
Trigger: AGACATCCAACAAGGAAATCAGCTCCATCCTGAAGG...GGCTTTGTGATCTAAACCATGTACCTGCCCCTGCCGTCCCAGATGGTGCGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACATGGCTGGCCAGACCCTaGAGGAGCCCTGTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTWLARP*RSPVSH
Trigger: ATGGGAAACAGGGCTCCTTCAGGGTCTGGCCAGCCA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCCATCAAACTCAATGGTaGAGGAGGCGTGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLHQTQW*RRRGSA
Trigger: TGCAGAGCCACGCCTCCTTCACCATTGAGTTTGATG...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTCATCAAACTCAATGGTaGAGGAGGCGTGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCHQTQW*RRRGSA
Trigger: TGCAGAGCCACGCCTCCTTCACCATTGAGTTTGATG...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACACAGTCTTCTCTCGCTTaGGCGAGCTGGCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTQSSLA*ASWPSV
Trigger: CACAGAGGGCCAGCTCGCTCAAGCGAGAGAAGACTG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACAGGCGGGTGCCACTGCTaGTCACCAGGAACCAAGATG +
Preference number: 4 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTGGCHC*SPGTKM
Trigger: CATCTTGGTTCCTGGTGAGCAGCAGTGGCACCCGCC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCAACTTCTGGTCTGGGATaGGCACATCATTCACAAATG +
Preference number: 4 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMATSGLG*AHHSQM
Trigger: CATTTGTGAATGATGTGCGCATCCCAGACCAGAAGT...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATACTTCTGGTCTGGGATaGGCACATCATTCACAAATG +
Preference number: 4 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHTSGLG*AHHSQM
Trigger: CATTTGTGAATGATGTGCGCATCCCAGACCAGAAGT...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACAAATCTCTGCGATCTCTaGTGTCTGCACGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTNLCDL*CLHDEA
Trigger: GGCTTCATCGTGCAGACAGCAGAGATCGCAGAGATT...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AGCTACCTCTCCCAGCAGACAGGTCCTGTTCAGGAGCAACGCCCACACACACATAATCTCTGCGATCTCTaGTGTCTGCACGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: SYLSQQTGPVQEQRPHTHNLCDL*CLHDEA
Trigger: GGCTTCATCGTGCAGACAGCAGAGATCGCAGAGATT...ATGTGTGTGTGGGCGTTGCTCCTGAACAGGACCTGTCTGCTGGGAGAGGTAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGAATCTCTGCGATCTCTaGTGTCTGCACGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: MGWMKWFRCWLRRVWKWENLCDL*CLHDEA
Trigger: GGCTTCATCGTGCAGACAGCAGAGATCGCAGAGATT...CTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCATTGATGACTTCTAACTaGTTCTGTACGCGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSLMTSN*FCTRRS
Trigger: ACTTCGACGCGTACAGAAGCAGTTAGAAGTCATCAA...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGTACATGGTTTAGATCACAAAGCCAGGAGCTTCCAAATCTCTTTCTGCCACTCAAGGAGGCGTGGCTCTaGACCACAGGGGCCGTCCCA +
Preference number: 4 (lower is better)
Translates to: GTWFRSQSQELPNLFLPLKEAWL*TTGAVP
Trigger: TGGGACGGCCCCTGTGGTGCAGAGCCACGCCTCCTT...GAGTGGCAGAAAGAGATTTGGAAGCTCCTGGCTTTGTGATCTAAACCATGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGATCGATGACAAAGGCTTaGTGGTTGTGCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRSMTKA*WLCSSS
Trigger: AGAGCTGCTGCACAACCAGCAAGCCTTTGTCATCGA...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AGCTACCTCTCCCAGCAGACAGGTCCTGTTCAGGAGCAACGCCCACACACACATTCGATGACAAAGGCTTaGTGGTTGTGCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SYLSQQTGPVQEQRPHTHSMTKA*WLCSSS
Trigger: AGAGCTGCTGCACAACCAGCAAGCCTTTGTCATCGA...ATGTGTGTGTGGGCGTTGCTCCTGAACAGGACCTGTCTGCTGGGAGAGGTAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGCCCGCACCATCTGGGACGGCAGGGGCAGGTACATGGTTTAGATCACAAAGCCAGTGTGATGTACTTCTaGTCTGGGATGCGCACATCA +
Preference number: 4 (lower is better)
Translates to: CPHHLGRQGQVHGLDHKASVMYF*SGMRTS
Trigger: TGATGTGCGCATCCCAGACCAGAAGTACATCACACT...GGCTTTGTGATCTAAACCATGTACCTGCCCCTGCCGTCCCAGATGGTGCGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGTCTCCAGCCACATCATaGATCTCCCTGGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQSPATS*ISLARM
Trigger: CATCCTGGCCAGGGAGATCCATGATGTGGCTGGAGA...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGTTGAGGCAGGGGTGTTaGGCACATTCCCGAGAGATG +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQLRQGC*AHSREM
Trigger: CATCTCTCGGGAATGTGCCCAACACCCCTGCCTCAA...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGACCGTGTTTTCACGAATaGCATGTGACAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRPCFHE*HVTAGT
Trigger: TGTCCCAGCTGTCACATGCCATTCGTGAAAACACGG...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTTGGATGTCTTCAGGATaGGTACTTCATTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCWMSSG*VLHSQS
Trigger: ACTCTGAGAATGAAGTACCCATCCTGAAGACATCCA...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTGATTTTCACCTTGCCTaGACTGCAGTCATCAAACTC +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSDFHLA*TAVIKL
Trigger: GAGTTTGATGACTGCAGTCCAGGCAAGGTGAAAATC...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTGTGTGTGTAAAGGACTaGGAGCGTTTCTTACGGGGT +
Preference number: 4 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTVCVKD*ERFLRG
Trigger: ACCCCGTAAGAAACGCTCCCAGTCCTTTACACACAC...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGCTACCTCTCCCAGCAGACAGGTCCTGTTCAGGAGCAACGCCCACACACACATCCACAAATGATTTCTTaGGGAAGGTGGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SYLSQQTGPVQEQRPHTHPQMIS*GRWPPH
Trigger: ATGGGGAGGCCACCTTCCCCAAGAAATCATTTGTGG...ATGTGTGTGTGGGCGTTGCTCCTGAACAGGACCTGTCTGCTGGGAGAGGTAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTCCACAAATGATTTCTTaGGGAAGGTGGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTPQMIS*GRWPPH
Trigger: ATGGGGAGGCCACCTTCCCCAAGAAATCATTTGTGG...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGATTGGGGTCTGTGTGGTaGAAGAATATCTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRLGSVW*KNIWHC
Trigger: GCAGTGCCAGATATTCTTCCACCACACAGACCCCAA...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220627.2
3UTR CAA 72 bp AGTGTCCCTAGCTGGGATGAATCCACTCAGGAGAGCTaGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SVPSWDESTQES*LGQYPNSVGLA
Trigger: TGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATTCATCCCAGCTAGGGACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCACTTCATTCTCAGAGTTaGTTCTGGCCTCTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: HPTPATGLFGLVPPEASALHSQS*FWPLSP
Trigger: AGGACTTAGAGGCCAGAATCAACTCTGAGAATGAAG...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTCCTTCAGGATGGAGCTaGTTTCCTTGTTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTPSGWS*FPCWMS
Trigger: AGACATCCAACAAGGAAATCAGCTCCATCCTGAAGG...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGCATCAAACTCAATGGTaGAGGAGGCGTGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQHQTQW*RRRGSA
Trigger: TGCAGAGCCACGCCTCCTTCACCATTGAGTTTGATG...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACACTTGAGGGTCCCTTTTaGTCTGCCTCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTLEGPF*SASAAA
Trigger: TGCGGCTGCAGAGGCAGATCAAAAGGGACCCTCAAG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGTTGATGACGGCATGCTaGTTGTCCACACTACGGGAC +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQLMTAC*LSTLRD
Trigger: GTCCCGTAGTGTGGACAAGCAGCATGCCGTCATCAA...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATTTGATGACTTCTAACTaGTTCTGTACGCGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHLMTSN*FCTRRS
Trigger: ACTTCGACGCGTACAGAAGCAGTTAGAAGTCATCAA...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCTTGATGACTTCTAACTaGTTCTGTACGCGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSLMTSN*FCTRRS
Trigger: ACTTCGACGCGTACAGAAGCAGTTAGAAGTCATCAA...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGATGTACTTCTGGTCTaGGATGCGCACATCATTCAC +
Preference number: 4 (lower is better)
Translates to: TRQVASFLGSLGTCQTHPDVLLV*DAHIIH
Trigger: GTGAATGATGTGCGCATCCCAGACCAGAAGTACATC...TGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCCTAACACGTACATGTTaGAATCATAGCCAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSLTRTC*NHSQSG
Trigger: TCCGCTTTGGCTATGATTCCAACATGTACGTGTTAG...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACACCAGGCGGCACTTTCTaGAAGTTCAGGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTPGGTF*KFRLAS
Trigger: AGAGGCCAGCCTGAACTTCCAGAAAGTGCCGCCTGG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTTGGATGTCTTCAGGATaGGTACTTCATTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSWMSSG*VLHSQS
Trigger: ACTCTGAGAATGAAGTACCCATCCTGAAGACATCCA...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGTACATGGTTTAGATCACAAAGCCAGGAGCTTCCAAATCTCTTTCTGCCACTCGCAGTTGGCCCGCTGTaGGAAGCTCCTGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GTWFRSQSQELPNLFLPLAVGPL*EAPERQ
Trigger: CTGCCTCTCAGGAGCTTCCCACAGCGGGCCAACTGC...GAGTGGCAGAAAGAGATTTGGAAGCTCCTGGCTTTGTGATCTAAACCATGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAGATTTTCACCTTGCCTaGACTGCAGTCATCAAACTC +
Preference number: 4 (lower is better)
Translates to: HPTPATGLFGLVPPEASADFHLA*TAVIKL
Trigger: GAGTTTGATGACTGCAGTCCAGGCAAGGTGAAAATC...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTAACACTCCAAAAACCTaGTCGATCATCCTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCNTPKT*SIILRA
Trigger: GGCTCGGAGGATGATCGACCAGGTTTTTGGAGTGTT...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGTACATGGTTTAGATCACAAAGCCAGGAGCTTCCAAATCTCTTTCTGCCACTCGGCCCTGGTGGGCCTTaGGGTGGACAGGCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: GTWFRSQSQELPNLFLPLGPGGP*GGQAVR
Trigger: TCTAACAGCCTGTCCACCCCAAGGCCCACCAGGGCC...GAGTGGCAGAAAGAGATTTGGAAGCTCCTGGCTTTGTGATCTAAACCATGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR CAA 72 bp TGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGTaGTGTTGGCACCAAGGACTTAGAACCACTCGTCTG +
Preference number: 4 (lower is better)
Translates to: CWDSTQTQWVWQ*CWHQGLRTTRL
Trigger: CAGACGAGTGGTTCTAAGTCCTTGGTGCCAACACAACTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp ACAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCACATTCTGATCACCAATaGAGAAAGAGGTGGGGACTA +
Preference number: 4 (lower is better)
Translates to: TRQVASFLGSLGTCQTHPHSDHQ*RKRWGL
Trigger: TAGTCCCCACCTCTTTCTTCATTGGTGATCAGAATG...TGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGCTAGACGGGCCCGCCTaGGTCGGGAGGCCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRLDGPA*VGRPWW
Trigger: CCACCAGGGCCTCCCGACTCAGGCGGGCCCGTCTAG...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGTACATGGTTTAGATCACAAAGCCAGGAGCTTCCAAATCTCTTTCTGCCACTCGAAGGTCGCTTTTGGTaGTGTGGCGGTCATCCCCGG +
Preference number: 4 (lower is better)
Translates to: GTWFRSQSQELPNLFLPLEGRFW*CGGHPR
Trigger: CCGGGGATGACCGCCACAGCACCAAAAGCGACCTTC...GAGTGGCAGAAAGAGATTTGGAAGCTCCTGGCTTTGTGATCTAAACCATGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACACATCATGGATCTCCCTaGCCAGGATGGCCACATCCT +
Preference number: 4 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTHHGSP*PGWPHP
Trigger: AGGATGTGGCCATCCTGGCCAGGGAGATCCATGATG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGCCGTGTTTTCACGAATaGCATGTGACAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQPCFHE*HVTAGT
Trigger: TGTCCCAGCTGTCACATGCCATTCGTGAAAACACGG...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACAGATTTTCACCTTGCCTaGACTGCAGTCATCAAACTC +
Preference number: 4 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTDFHLA*TAVIKL
Trigger: GAGTTTGATGACTGCAGTCCAGGCAAGGTGAAAATC...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGAACACTCCAAAAACCTaGTCGATCATCCTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQNTPKT*SIILRA
Trigger: GGCTCGGAGGATGATCGACCAGGTTTTTGGAGTGTT...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACACTCCTTCTGTGGTCCTaGAGTCTGGGGTGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTLLLWS*SLGCCW
Trigger: CCAACAACACCCCAGACTCCAGGACCACAGAAGGAG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGCATCGAAGAACTCGATaGCAAAGGCTTGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQHRRTR*QRLAGC
Trigger: ACAACCAGCAAGCCTTTGTCATCGAGTTCTTCGATG...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTACTTCTGGTCTGGGATaGGCACATCATTCACAAATG +
Preference number: 4 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLTSGLG*AHHSQM
Trigger: CATTTGTGAATGATGTGCGCATCCCAGACCAGAAGT...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATCCCCACCAGGAGGGCTaGCCATACAGGGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDPHQEG*PYRGVR
Trigger: CCGCACACCCCTGTATGGGCAGCCCTCCTGGTGGGG...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTCCCGAGAGATGGGCTaGGAGTGGGGCCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDSREMG*EWGLGS
Trigger: GCTCCCCAGGCCCCACTCGCAGCCCATCTCTCGGGA...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGTCACCTTGCCTGGACTaGAGTCATCAAACTCAATGG +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQSPCLD*SHQTQW
Trigger: CCATTGAGTTTGATGACTGCAGTCCAGGCAAGGTGA...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTCTAACACGTACATGTTaGAATCATAGCCAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTLTRTC*NHSQSG
Trigger: TCCGCTTTGGCTATGATTCCAACATGTACGTGTTAG...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCGAGAACTTGGTGATATaGTCTTTGATTTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLENLVI*SLIFTL
Trigger: CAAGGTGAAAATCAAAGACCATATCACCAAGTTCTC...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTGAGAACTTGGTGATATaGTCTTTGATTTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSENLVI*SLIFTL
Trigger: CAAGGTGAAAATCAAAGACCATATCACCAAGTTCTC...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCGAGAACTTGGTGATATaGTCTTTGATTTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSENLVI*SLIFTL
Trigger: CAAGGTGAAAATCAAAGACCATATCACCAAGTTCTC...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGGGCGCAGAGACCTTaGCGCTCACCTGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDWAQRP*RSPAAG
Trigger: GCCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCA...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGCTTCATTCTCAGAGTTaGTTCTGGCCTCTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQLHSQS*FWPLSP
Trigger: AGGACTTAGAGGCCAGAATCAACTCTGAGAATGAAG...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGCATTCTGATCACCAATaGAGAAAGAGGTGGGGACTA +
Preference number: 4 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQHSDHQ*RKRWGL
Trigger: TAGTCCCCACCTCTTTCTTCATTGGTGATCAGAATG...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACAAATCTCTGCGATCTCTaGTGTCTGCACGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTNLCDL*CLHDEA
Trigger: GGCTTCATCGTGCAGACAGCAGAGATCGCAGAGATT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCTTGATGACTTCTAACTaGTTCTGTACGCGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLLMTSN*FCTRRS
Trigger: ACTTCGACGCGTACAGAAGCAGTTAGAAGTCATCAA...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGTACATGGTTTAGATCACAAAGCCAGGAGCTTCCAAATCTCTTTCTGCCACTCGCCGACGCCTCGTGTTaGAAGAATATCTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: GTWFRSQSQELPNLFLPLADASC*KNIWHC
Trigger: GCAGTGCCAGATATTCTTCCAACACGAGGCGTCGGC...GAGTGGCAGAAAGAGATTTGGAAGCTCCTGGCTTTGTGATCTAAACCATGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATCCGTCTCCACAGGGGTaGTCTCCTTGCTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDPSPQG*SPCWEP
Trigger: GGGCTCCCAGCAAGGAGACCACCCCTGTGGAGACGG...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACAGTGTGTGTAAAGGACTaGGAGCGTTTCTTACGGGGT +
Preference number: 4 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTVCVKD*ERFLRG
Trigger: ACCCCGTAAGAAACGCTCCCAGTCCTTTACACACAC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGCGTGCCTTGGTCAGCTaGGGGTCAGTGGGAGGCGGT +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRRALVS*GSVGGG
Trigger: ACCGCCTCCCACTGACCCTCAGCTGACCAAGGCACG...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTCTGTGGTCCTGAGCTaGTGCCAGTGGCACGGACCG +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDSVVLS*CQWHGP
Trigger: CGGTCCGTGCCACTGGCAGCAGCTCAGGACCACAGA...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACAGATGTACTTCTGGTCTaGGATGCGCACATCATTCAC +
Preference number: 4 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTDVLLV*DAHIIH
Trigger: GTGAATGATGTGCGCATCCCAGACCAGAAGTACATC...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGTACATGGTTTAGATCACAAAGCCAGGAGCTTCCAAATCTCTTTCTGCCACTCATGGCATGTGACAGCTaGGACACCGGGTTTAGCATC +
Preference number: 4 (lower is better)
Translates to: GTWFRSQSQELPNLFLPLMACDS*DTGFSI
Trigger: GATGCTAAACCCGGTGTCCCAGCTGTCACATGCCAT...GAGTGGCAGAAAGAGATTTGGAAGCTCCTGGCTTTGTGATCTAAACCATGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACAGAGAACTTGGTGATATaGTCTTTGATTTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTENLVI*SLIFTL
Trigger: CAAGGTGAAAATCAAAGACCATATCACCAAGTTCTC...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATGCCAGTCGGCCACCTTaGTTTCGGCCGAGACCGTCT +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDASRPP*FRPRPS
Trigger: AGACGGTCTCGGCCGAAACCAAGGTGGCCGACTGGC...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATAGGGGGTCACAGGGCTaGCTCCTCGGGGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDRGSQG*LLGVSK
Trigger: CTTTGACACCCCGAGGAGCCAGCCCTGTGACCCCCT...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATAGTCCTCTGGAGGCCTaGGGGTGCTACCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDSPLEA*GCYPHH
Trigger: GTGATGGGGGTAGCACCCCCAGGCCTCCAGAGGACT...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGTACATGGTTTAGATCACAAAGCCAGGAGCTTCCAAATCTCTTTCTGCCACTCTGGGTCTGGTACTGTTaGTGGAGACAATGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GTWFRSQSQELPNLFLPLWVWYC*WRQWAL
Trigger: GAGAGCCCATTGTCTCCACCAACAGTACCAGACCCA...GAGTGGCAGAAAGAGATTTGGAAGCTCCTGGCTTTGTGATCTAAACCATGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
3UTR CAA 72 bp CTTCAGAAGCCAGGCATGTACAGTACCAATGCCGGGTaGAAGGCTAAAGTGACAGAGGAACTAAGTATGGAG +
Preference number: 4 (lower is better)
Translates to: LQKPGMYSTNAG*KAKVTEELSME
Trigger: CTCCATACTTAGTTCCTCTGTCACTTTAGCCTTCAACCCGGCATTGGTACTGTACATGCCTGGCTTCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GGTACATGGTTTAGATCACAAAGCCAGGAGCTTCCAAATCTCTTTCTGCCACTCTCACAAATGTCCCATTaGGACTGCCCAGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GTWFRSQSQELPNLFLPLSQMSH*DCPGPS
Trigger: TGAAGGACCTGGGCAGTCTCAATGGGACATTTGTGA...GAGTGGCAGAAAGAGATTTGGAAGCTCCTGGCTTTGTGATCTAAACCATGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATGGCGGGTGCCACTGCTaGTCACCAGGAACCAAGATG +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDGGCHC*SPGTKM
Trigger: CATCTTGGTTCCTGGTGAGCAGCAGTGGCACCCGCC...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGTCTGTGGTCCTGAGCTaGTGCCAGTGGCACGGACCG +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRSVVLS*CQWHGP
Trigger: CGGTCCGTGCCACTGGCAGCAGCTCAGGACCACAGA...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATCCCTTGGGGTCTGTGTaGCTGTTGAGGCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDPLGSV*LLRHGS
Trigger: GCTCCCATGCCTCAACAGCCACACAGACCCCAAGGG...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATCCTGAGAGGCAGGGCTaGCAGCAAGGTATCCACCGA +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDPERQG*QQGIHR
Trigger: TCGGTGGATACCTTGCTGCCAGCCCTGCCTCTCAGG...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGATGGTGAAGGAGGCGTaGCTCTGCACCACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRMVKEA*LCTTGA
Trigger: GGCCCCTGTGGTGCAGAGCCACGCCTCCTTCACCAT...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATCTTGAGGGTCCCTTTTaGTCTGCCTCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDLEGPF*SASAAA
Trigger: TGCGGCTGCAGAGGCAGATCAAAAGGGACCCTCAAG...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGATCAGGTGGGTGTCCTaGGCGTGGAAGTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRIRWVS*AWKSRR
Trigger: ACGCCTGGACTTCCACGCTCAGGACACCCACCTGAT...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGGGCGGGTGCCACTGCTaGTCACCAGGAACCAAGATG +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRGGCHC*SPGTKM
Trigger: CATCTTGGTTCCTGGTGAGCAGCAGTGGCACCCGCC...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACATTGATGACTTCTAACTaGTTCTGTACGCGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTLMTSN*FCTRRS
Trigger: ACTTCGACGCGTACAGAAGCAGTTAGAAGTCATCAA...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATCGTCCCACCAACACCTaGCTCCTGGTCTTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDRPTNT*LLVFCG
Trigger: CCCACAAAAGACCAGGAGGCAGGTGTTGGTGGGACG...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATCCGAGTCGCTCTGTGTaGCATCCTCATGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDPSRSV*HPHACG
Trigger: GCCACAAGCATGAGGATGGCACACAGAGCGACTCGG...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GGTACATGGTTTAGATCACAAAGCCAGGAGCTTCCAAATCTCTTTCTGCCACTCGATGTACTTCTGGTCTaGGATGCGCACATCATTCAC +
Preference number: 4 (lower is better)
Translates to: GTWFRSQSQELPNLFLPLDVLLV*DAHIIH
Trigger: GTGAATGATGTGCGCATCCCAGACCAGAAGTACATC...GAGTGGCAGAAAGAGATTTGGAAGCTCCTGGCTTTGTGATCTAAACCATGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACACTAACACGTACATGTTaGAATCATAGCCAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTLTRTC*NHSQSG
Trigger: TCCGCTTTGGCTATGATTCCAACATGTACGTGTTAG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATGTGCCGGTCTTCAGATaGTGCCCCACTGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDVPVFR*CPTVIL
Trigger: GAGGATGACAGTGGGGCACCATCTGAAGACCGGCAC...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTTTGTGGGCACTTCCTaGGTAGGCACCTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDFVGTS*VGTSGS
Trigger: GCTCCCTGAGGTGCCTACCCAGGAAGTGCCCACAAA...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATCCAGGCGGCACTTTCTaGAAGTTCAGGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDPGGTF*KFRLAS
Trigger: AGAGGCCAGCCTGAACTTCCAGAAAGTGCCGCCTGG...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGCTCTGCTGCTCCATCTaGGGAGCCATGCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRLCCSI*GAMPGA
Trigger: AGCACCAGGCATGGCTCCCCAGATGGAGCAGCAGAG...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGACCCCCAGGAGAACCTaGGACCAAGAGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRTPRRT*DQEALL
Trigger: CAGCAGAGCCTCTTGGTCCCAGGTTCTCCTGGGGGT...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGCCCTTGCTGAAGGGCTaGTCTGGACTACCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRPLLKG*SGLPVL
Trigger: CAGGACGGGTAGTCCAGACCAGCCCTTCAGCAAGGG...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGAAGGCCATCCCTTGCTaGAGGGCTGGTCTGGACTAC +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRKAIPC*RAGLDY
Trigger: GTAGTCCAGACCAGCCCTTCAGCAAGGGATGGCCTT...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGCCGAGTCGCTCTGTGTaGCATCCTCATGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRPSRSV*HPHACG
Trigger: GCCACAAGCATGAGGATGGCACACAGAGCGACTCGG...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGAGGGGCAGCACGATTTaGTGGTTCAGGGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRRGSTI*WFRVGC
Trigger: GCAGCCAACCCTGAACCAGCAAATCGTGCTGCCCCT...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGTTTGTGGGCACTTCCTaGGTAGGCACCTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRFVGTS*VGTSGS
Trigger: GCTCCCTGAGGTGCCTACCCAGGAAGTGCCCACAAA...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATACTCCTCCTCGGAGGTaGACGTGTAATCCGAACCCT +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDTPPRR*TCNPNP
Trigger: AGGGTTCGGATTACACGTCCACCTCCGAGGAGGAGT...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGCCAGGGTAGCCTCTaGGGTCTCGTGGTTAGAACT +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDCQGSL*GLVVRT
Trigger: AGTTCTAACCACGAGACCCCAGAGGCTACCCTGGCA...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATCATCAAACTCAATGGTaGAGGAGGCGTGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDHQTQW*RRRGSA
Trigger: TGCAGAGCCACGCCTCCTTCACCATTGAGTTTGATG...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR TCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGCCCAGGACCCACAAATaGTTTCTTGGGGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRPRTHK*FLGEGG
Trigger: GCCACCTTCCCCAAGAAATCATTTGTGGGTCCTGGG...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR GCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGTTGATGACGGCATGCTaGTTGTCCACACTACGGGAC +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRLMTAC*LSTLRD
Trigger: GTCCCGTAGTGTGGACAAGCAGCATGCCGTCATCAA...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATAACACTCCAAAAACCTaGTCGATCATCCTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDNTPKT*SIILRA
Trigger: GGCTCGGAGGATGATCGACCAGGTTTTTGGAGTGTT...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATCCACAAATGATTTCTTaGGGAAGGTGGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDPQMIS*GRWPPH
Trigger: ATGGGGAGGCCACCTTCCCCAAGAAATCATTTGTGG...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATGATGTACTTCTGGTCTaGGATGCGCACATCATTCAC +
Preference number: 4 (lower is better)
Translates to: AREQCTLSFKATNKNNGDDVLLV*DAHIIH
Trigger: GTGAATGATGTGCGCATCCCAGACCAGAAGTACATC...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CCA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGGATTTTCACCTTGCCTaGACTGCAGTCATCAAACTC +
Preference number: 4 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRDFHLA*TAVIKL
Trigger: GAGTTTGATGACTGCAGTCCAGGCAAGGTGAAAATC...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGGGCGGAGCTGCGGCTTaGCTCCTCCCGTGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWGGAAA*LLPCGW
Trigger: CCAGCCGCACGGGAGGAGCAAAGCCGCAGCTCCGCC...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GGTGGCGGAGCTGCGGCTTTGCTCCTCCCGTGCGGCTGGGGATGGTaGGGGAGCCGCTGGTTTCCGACGAGGTCCTTGTCGGCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: GGGAAALLLPCGWGW*GSRWFPTRSLSACQ
Trigger: CTGGCAGGCCGACAAGGACCTCGTCGGAAACCAGCGGCTCCCCCACCATCCCCAGCCGCACGGGAGGAGCAAAGCCGCAGCTCCGCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp AGCGGTGGCGGAGCTGCGGCTTTGCTCCTCCCGTGCGGCTGGGGATaGTGGGGGAGCCGCTGGTTTCCGACGAGGTCCTTGTCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SGGGAAALLLPCGWG*WGSRWFPTRSLSAC
Trigger: GCAGGCCGACAAGGACCTCGTCGGAAACCAGCGGCTCCCCCACCATCCCCAGCCGCACGGGAGGAGCAAAGCCGCAGCTCCGCCACCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp CGGTCATCCCCGGGGCCATCCCGGCGCAGCAGGCTTGGGTCGTTCTaGACCAGCCAGTCGGCCACCTTGGTTTCGGCCGAGACCGTCTCC +
Preference number: 5 (lower is better)
Translates to: RSSPGPSRRSRLGSF*TSQSATLVSAETVS
Trigger: GGAGACGGTCTCGGCCGAAACCAAGGTGGCCGACTGGCTGGTGCAGAACGACCCAAGCCTGCTGCGCCGGGATGGCCCCGGGGATGACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp CTGCACCTTCTGAGCGGTGGCGGAGCTGCGGCTTTGCTCCTCCCGTaGGGCTGGGGATGGTGGGGGAGCCGCTGGTTTCCGACGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LHLLSGGGAAALLLP*GWGWWGSRWFPTRS
Trigger: GGACCTCGTCGGAAACCAGCGGCTCCCCCACCATCCCCAGCCGCACGGGAGGAGCAAAGCCGCAGCTCCGCCACCGCTCAGAAGGTGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GGTGCTGTGGCGGTCATCCCCGGGGCCATCCCGGCGCAGCAGGCTTaGGTCGTTCTGCACCAGCCAGTCGGCCACCTTGGTTTCGGCCGA +
Preference number: 5 (lower is better)
Translates to: GAVAVIPGAIPAQQA*VVLHQPVGHLGFGR
Trigger: TCGGCCGAAACCAAGGTGGCCGACTGGCTGGTGCAGAACGACCCAAGCCTGCTGCGCCGGGATGGCCCCGGGGATGACCGCCACAGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GCGGCTTTGCTCCTCCCGTGCGGCTGGGGATGGTGGGGGAGCCGCTaGTTTCCGACGAGGTCCTTGTCGGCCTGCCAGGGTAGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: AALLLPCGWGWWGSR*FPTRSLSACQGSLW
Trigger: CCAGAGGCTACCCTGGCAGGCCGACAAGGACCTCGTCGGAAACCAGCGGCTCCCCCACCATCCCCAGCCGCACGGGAGGAGCAAAGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGCCCGGCGCAGCAGGCTaGGGTCGTTCTGCACCAGCC +
Preference number: 5 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRPGAAG*GRSAPA
Trigger: GGCTGGTGCAGAACGACCCAAGCCTGCTGCGCCGGG...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 90 bp GGGGTGGACAGGCTGTTAGAGCGGGTCAGTGCCTGCTGCACCTTCTaGGCGGTGGCGGAGCTGCGGCTTTGCTCCTCCCGTGCGGCTGGG +
Preference number: 5 (lower is better)
Translates to: GVDRLLERVSACCTF*AVAELRLCSSRAAG
Trigger: CCCAGCCGCACGGGAGGAGCAAAGCCGCAGCTCCGCCACCGCTCAGAAGGTGCAGCAGGCACTGACCCGCTCTAACAGCCTGTCCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GCCAGTCGGCCACCTTGGTTTCGGCCGAGACCGTCTCCACAGGGGTaGTCTCCTTGCTGGGAGCCCGCCGCTGGCGCAGGGAGAACTTGG +
Preference number: 5 (lower is better)
Translates to: ASRPPWFRPRPSPQG*SPCWEPAAGAGRTW
Trigger: CCAAGTTCTCCCTGCGCCAGCGGCGGGCTCCCAGCAAGGAGACCACCCCTGTGGAGACGGTCTCGGCCGAAACCAAGGTGGCCGACTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp CTTCTGAGCGGTGGCGGAGCTGCGGCTTTGCTCCTCCCGTGCGGCTaGGGATGGTGGGGGAGCCGCTGGTTTCCGACGAGGTCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: LLSGGGAAALLLPCG*GWWGSRWFPTRSLS
Trigger: CGACAAGGACCTCGTCGGAAACCAGCGGCTCCCCCACCATCCCCAGCCGCACGGGAGGAGCAAAGCCGCAGCTCCGCCACCGCTCAGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GTCTCGGGGGCCCTGGGAGCGAGCCCGGGTAGAGCTGCTGCCCCTTaGGGTCTGTGTGGTGGAAGAATATCTGGCACTGCCCGGGCGAGC +
Preference number: 5 (lower is better)
Translates to: VSGALGASPGRAAAP*GLCGGRISGTARAS
Trigger: GCTCGCCCGGGCAGTGCCAGATATTCTTCCACCACACAGACCCCAAGGGGCAGCAGCTCTACCCGGGCTCGCTCCCAGGGCCCCCGAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000220627.2
CDS-3UTR CAA 90 bp GCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTGTAGCAGCAGCCTTCTaGGCAGCAGCACGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: ACPCQASATDRAAGACCSVAAAF*AAARAS
Trigger: TGAGGCCCGTGCTGCTGCCAAGAAGGCTGCTGCTAC...ACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGACAGGGGTGGTCTCCTaGCTGGGAGCCCGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQTGVVS*LGARRW
Trigger: CCAGCGGCGGGCTCCCAGCAAGGAGACCACCCCTGT...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGGGCGGAGCTGCGGCTTaGCTCCTCCCGTGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALGGAAA*LLPCGW
Trigger: CCAGCCGCACGGGAGGAGCAAAGCCGCAGCTCCGCC...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 90 bp GAACCTCGCTCTTCCTCGGGCCAGTCCAGGGACCCTCGAGACCCATaGCCTCGCCGCATGGCTGCGCGCCTTGATGTGTCTCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: EPRSSSGQSRDPRDP*PRRMAARLDVSPGP
Trigger: GGGCCCTGGAGACACATCAAGGCGCGCAGCCATGCGGCGAGGTCATGGGTCTCGAGGGTCCCTGGACTGGCCCGAGGAAGAGCGAGGTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp CCTCGGGCCAGTCCAGGGACCCTCGAGACCCATGACCTCGCCGCATaGCTGCGCGCCTTGATGTGTCTCCAGGGCCCAAGTCTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: PRASPGTLETHDLAA*LRALMCLQGPSLQV
Trigger: CACCTGCAGACTTGGGCCCTGGAGACACATCAAGGCGCGCAGCCATGCGGCGAGGTCATGGGTCTCGAGGGTCCCTGGACTGGCCCGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTGGGCGCAGAGACCTaGACGCTCACCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWLGAET*TLTCSW
Trigger: CCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCAA...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GGCGCAGCAGGCTTGGGTCGTTCTGCACCAGCCAGTCGGCCACCTTaGTTTCGGCCGAGACCGTCTCCACAGGGGTGGTCTCCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: GAAGLGRSAPASRPP*FRPRPSPQGWSPCW
Trigger: CCAGCAAGGAGACCACCCCTGTGGAGACGGTCTCGGCCGAAACCAAGGTGGCCGACTGGCTGGTGCAGAACGACCCAAGCCTGCTGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGCACCTCAGGGAGCCTaGGAGGCTGCGGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLAPQGA*EAAGFP
Trigger: AGGAAACCCCGCAGCCTCCAAGGCTCCCTGAGGTGC...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCAGCCAGTCGGCCACCTaGGTTTCGGCCGAGACCGTC +
Preference number: 5 (lower is better)
Translates to: CQASATDRAAGACCSYHFSQSAT*VSAETV
Trigger: GACGGTCTCGGCCGAAACCAAGGTGGCCGACTGGCT...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGGACACCGAAGCAGTCTaGGCCAAGGGGTCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRDTEAV*AKGSSE
Trigger: CTCGGAGGACCCCTTGGCCAAGACTGCTTCGGTGTC...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGTCTCGGGGGCAGGTCTaGTGGCTGGGGAACTGTCCC +
Preference number: 5 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQSRGQV*WLGNCP
Trigger: GGGACAGTTCCCCAGCCACAAGACCTGCCCCCGAGA...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCGGCGGAGCTGCGGCTTaGCTCCTCCCGTGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: GKWPPSWAVWGHAKPIQLGGAAA*LLPCGW
Trigger: CCAGCCGCACGGGAGGAGCAAAGCCGCAGCTCCGCC...GAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp GACGCCGAGTTCGCACAGGCAGGGGCCCCTCAGGCTCTCCGGTTCTaGGCCCAGGACCGTCCTCTGGCAAACCAGCATCTGAGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: DAEFAQAGAPQALRF*AQDRPLANQHLSSC
Trigger: ACAGCTACTCAGATGCTGGTTTGCCAGAGGACGGTCCTGGGCGCAGAACCGGAGAGCCTGAGGGGCCCCTGCCTGTGCGAACTCGGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GTCTTCCTGGCCTATGAGGCAGTTTGCTGGCTCACTGCCCAGCTCTaGTGGCCCTGGGCCATTCCGCCTGGCAGCTTCAAGGCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: VFLAYEAVCWLTAQL*WPWAIPPGSFKACG
Trigger: CCCGCAGGCCTTGAAGCTGCCAGGCGGAATGGCCCAGGGCCACCAGAGCTGGGCAGTGAGCCAGCAAACTGCCTCATAGGCCAGGAAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp CTCTCGGGCGCTGCCCGGGGTAGCACCCCCTGGGTCTGGTACTGTTaGTGGAGACAATGGGCTCTCCTTCTGTGGTCCTGGAGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: LSGAARGSTPWVWYC*WRQWALLLWSWSLG
Trigger: CCCCAGACTCCAGGACCACAGAAGGAGAGCCCATTGTCTCCACCAACAGTACCAGACCCAGGGGGTGCTACCCCGGGCAGCGCCCGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCGTAGCAGCAGCCTTCTaGGCAGCAGCACGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: CQASATDRAAGACCSYHFVAAAF*AAARAS
Trigger: TGAGGCCCGTGCTGCTGCCAAGAAGGCTGCTGCTAC...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGCCGAGGCAGGTGAAGTaGAGCTCTGAGCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQPRQVK*SSELLA
Trigger: GGCCAGCAGCTCAGAGCTCAACTTCACCTGCCTCGG...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCACAGGGGTGGTCTCCTaGCTGGGAGCCCGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLTGVVS*LGARRW
Trigger: CCAGCGGCGGGCTCCCAGCAAGGAGACCACCCCTGT...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATACAGGGGTGGTCTCCTaGCTGGGAGCCCGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHTGVVS*LGARRW
Trigger: CCAGCGGCGGGCTCCCAGCAAGGAGACCACCCCTGT...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACAGCCAGTCGGCCACCTaGGTTTCGGCCGAGACCGTC +
Preference number: 5 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHSQSAT*VSAETV
Trigger: GACGGTCTCGGCCGAAACCAAGGTGGCCGACTGGCT...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACTCTCGGGGGCAGGTCTaGTGGCTGGGGAACTGTCCC +
Preference number: 5 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHSRGQV*WLGNCP
Trigger: GGGACAGTTCCCCAGCCACAAGACCTGCCCCCGAGA...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTCTGGAGTCTGGGGTGTaGTTGGGCTGGGACCATTTT +
Preference number: 5 (lower is better)
Translates to: ACPCQASATDRAAGACCSLESGV*LGWDHF
Trigger: AAAATGGTCCCAGCCCAACAACACCCCAGACTCCAG...ACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS TCA 90 bp AGAAGCCAGTACGGGCAGGGGCAGTCTCAGAATCACTGGGCCCTGTaGAGGAGCCTGCCCGCTTCCGGGGCATGGCCAGGATGTCCAAGC +
Preference number: 5 (lower is better)
Translates to: RSQYGQGQSQNHWAL*RSLPASGAWPGCPS
Trigger: GCTTGGACATCCTGGCCATGCCCCGGAAGCGGGCAGGCTCCTTCACAGGGCCCAGTGATTCTGAGACTGCCCCTGCCCGTACTGGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp GGATGGTGGGGGAGCCGCTGGTTTCCGACGAGGTCCTTGTCGGCCTaGCAGGGTAGCCTCTGGGGTCTCGTGGTTAGAACTGGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: GWWGSRWFPTRSLSA*QGSLWGLVVRTGQV
Trigger: CACTTGCCCAGTTCTAACCACGAGACCCCAGAGGCTACCCTGGCAGGCCGACAAGGACCTCGTCGGAAACCAGCGGCTCCCCCACCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GCGTGGCTCTGCACCACAGGGGCCGTCCCACCAACACCTGCCTCCTaGTCTTTTGTGGGCACTTCCTGGGTAGGCACCTCAGGGAGCCTT +
Preference number: 5 (lower is better)
Translates to: AWLCTTGAVPPTPAS*SFVGTSWVGTSGSL
Trigger: AAGGCTCCCTGAGGTGCCTACCCAGGAAGTGCCCACAAAAGACCAGGAGGCAGGTGTTGGTGGGACGGCCCCTGTGGTGCAGAGCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GCTCCCCACTGGCCTCCGCTGAGGCTCCAGACACCGAAGCAGTCTTaGCCAAGGGGTCCTCCGAGTCGCTCTGTGTGCCATCCTCATGCT +
Preference number: 5 (lower is better)
Translates to: APHWPPLRLQTPKQS*PRGPPSRSVCHPHA
Trigger: AGCATGAGGATGGCACACAGAGCGACTCGGAGGACCCCTTGGCCAAGACTGCTTCGGTGTCTGGAGCCTCAGCGGAGGCCAGTGGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GTGGAAGAATATCTGGCACTGCCCGGGCGAGCCCTGCTGAAGGGCTaGCGGGGGCCAGTGTTGGCTGCAGTAGCAGCAGCCTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: VEEYLALPGRALLKG*RGPVLAAVAAAFLA
Trigger: TGCCAAGAAGGCTGCTGCTACTGCAGCCAACACTGGCCCCCGCCAGCCCTTCAGCAGGGCTCGCCCGGGCAGTGCCAGATATTCTTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220627.2
CDS-3UTR CAA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACTTGGGCGCAGAGACCTaGACGCTCACCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHLGAET*TLTCSW
Trigger: CCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCAA...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGAGTGCATCACCCCTCTaGGGCGCAGAGACCTTGACG +
Preference number: 5 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLSASPL*GAETLT
Trigger: CGTCAAGGTCTCTGCGCCCAAGAGGGGTGATGCACT...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACGTAGCAGCAGCCTTCTaGGCAGCAGCACGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHVAAAF*AAARAS
Trigger: TGAGGCCCGTGCTGCTGCCAAGAAGGCTGCTGCTAC...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGCTCGATGACAAAGGCTaGCTGGTTGTGCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWLDDKG*LVVQQL
Trigger: GAGCTGCTGCACAACCAGCAAGCCTTTGTCATCGAG...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CATCCCACTCCAGCCACCGGGCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAGAGGCGGTGGGGTGGTaGAGGGGGTCACAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: HPTPATGLFGLVPPEASAEAVGW*RGSQGW
Trigger: CCAGCCCTGTGACCCCCTCAACCACCCCACCGCCTC...TGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGCCCGGTGGCTGGAGTGGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS TCA 90 bp AGGGCTGGCAGCAAGGTATCCACCGAGGCAGGTGAAGTTGAGCTCTaGGCTGCTGGCCGGGCTTTCCCAAGTCCTGGCTGGCCAGACCCT +
Preference number: 5 (lower is better)
Translates to: RAGSKVSTEAGEVEL*AAGRAFPSPGWPDP
Trigger: AGGGTCTGGCCAGCCAGGACTTGGGAAAGCCCGGCCAGCAGCTCAGAGCTCAACTTCACCTGCCTCGGTGGATACCTTGCTGCCAGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp GGCAGTGCATCACCCCTCTTGGGCGCAGAGACCTTGACGCTCACCTaGAGCTGGCTGGTGTACTTCTCGTGCTTGAGCGCCTCCTCGGGA +
Preference number: 5 (lower is better)
Translates to: GSASPLLGAETLTLT*SWLVYFSCLSASSG
Trigger: TCCCGAGGAGGCGCTCAAGCACGAGAAGTACACCAGCCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCAAGAGGGGTGATGCACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp CCTCAGCTATCGTGGGCTTACGGCTGGTGCTGTAGAGCTCAGCACTaGGACCGGAGAAGCCAGTACGGGCAGGGGCAGTCCCACCAACAC +
Preference number: 5 (lower is better)
Translates to: PQLSWAYGWCCRAQH*DRRSQYGQGQSHQH
Trigger: GTGTTGGTGGGACTGCCCCTGCCCGTACTGGCTTCTCCGGTCGCAGTGCTGAGCTCTACAGCACCAGCCGTAAGCCCACGATAGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092279.7
CDS CCA 90 bp GCATCACCCCTCTTGGGCGCAGAGACCTTGACGCTCACCTGCAGCTaGCTGGTGTACTTCTCGTGCTTGAGCGCCTCCTCGGGAACACGG +
Preference number: 5 (lower is better)
Translates to: ASPLLGAETLTLTCS*LVYFSCLSASSGTR
Trigger: CCGTGTTCCCGAGGAGGCGCTCAAGCACGAGAAGTACACCAGCCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCAAGAGGGGTGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp TTGGAAGAATATCTGGCACTGCCCGGGCGAGCCCTGCTGAAGGGCTaGCGGGGGCCAGTGTTGGCTGCAGTAGCAGCAGCCTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LEEYLALPGRALLKG*RGPVLAAVAAAFLA
Trigger: TGCCAAGAAGGCTGCTGCTACTGCAGCCAACACTGGCCCCCGCCAGCCCTTCAGCAGGGCTCGCCCGGGCAGTGCCAGATATTCTTCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS CCA 90 bp ACCTGGGACCAAGAGGCTCTGCTGCTCCATCTGGGGAGCCATGCCTaGTGCTCGGGAGGCAAACTCTTGCAGCAAAGCCATCCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TWDQEALLLHLGSHA*CSGGKLLQQSHPLG
Trigger: GCCCAGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCGAGCACCAGGCATGGCTCCCCAGATGGAGCAGCAGAGCCTCTTGGTCCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp CAGGCTAGCCCATCGGGAAACCCACTTCTGACCCCCAGGAGAACCTaGGACCAAGAGGCTCTGCTGCTCCATCTGGGGAGCCATGCCTGG +
Preference number: 5 (lower is better)
Translates to: QASPSGNPLLTPRRT*DQEALLLHLGSHAW
Trigger: CCAGGCATGGCTCCCCAGATGGAGCAGCAGAGCCTCTTGGTCCCAGGTTCTCCTGGGGGTCAGAAGTGGGTTTCCCGATGGGCTAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GAGACTATCAGGGTCCAGGTCTTCCTGGCCTATGAGGCAGTTTGCTaGCTCACTGCCCAGCTCTGGTGGCCCTGGGCCATTCCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: ETIRVQVFLAYEAVC*LTAQLWWPWAIPPG
Trigger: GCCAGGCGGAATGGCCCAGGGCCACCAGAGCTGGGCAGTGAGCCAGCAAACTGCCTCATAGGCCAGGAAGACCTGGACCCTGATAGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp CGCTGGTTTCCGACGAGGTCCTTGTCGGCCTGCCAGGGTAGCCTCTaGGGTCTCGTGGTTAGAACTGGGCAAGTGGGCAAGGCCAGAACC +
Preference number: 5 (lower is better)
Translates to: RWFPTRSLSACQGSL*GLVVRTGQVGKART
Trigger: GGTTCTGGCCTTGCCCACTTGCCCAGTTCTAACCACGAGACCCCAGAGGCTACCCTGGCAGGCCGACAAGGACCTCGTCGGAAACCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTTTGGGCGCAGAGACCTaGACGCTCACCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCLGAET*TLTCSW
Trigger: CCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCAA...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCGCACCTCAGGGAGCCTaGGAGGCTGCGGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSAPQGA*EAAGFP
Trigger: AGGAAACCCCGCAGCCTCCAAGGCTCCCTGAGGTGC...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTGCACCTCAGGGAGCCTaGGAGGCTGCGGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSAPQGA*EAAGFP
Trigger: AGGAAACCCCGCAGCCTCCAAGGCTCCCTGAGGTGC...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACACCCGGCGCAGCAGGCTaGGGTCGTTCTGCACCAGCC +
Preference number: 5 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTPGAAG*GRSAPA
Trigger: GGCTGGTGCAGAACGACCCAAGCCTGCTGCGCCGGG...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGACAGGAAGGTCGCTTTaGGTGCTGTGGCGGTCATCC +
Preference number: 5 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQTGRSL*VLWRSS
Trigger: GGATGACCGCCACAGCACCAAAAGCGACCTTCCTGT...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGGTGCCATCCTCATGCTaGTGGCCCTTCAGAGTTCGA +
Preference number: 5 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRVPSSC*WPFRVR
Trigger: TCGAACTCTGAAGGGCCACAAGCATGAGGATGGCAC...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGGACACCGAAGCAGTCTaGGCCAAGGGGTCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGDTEAV*AKGSSE
Trigger: CTCGGAGGACCCCTTGGCCAAGACTGCTTCGGTGTC...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGAGAGGCGGTGGGGTGGTaGAGGGGGTCACAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PGSSSFLCLASSQHIGMREAVGW*RGSQGW
Trigger: CCAGCCCTGTGACCCCCTCAACCACCCCACCGCCTC...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTCACTGGACTCATCTTaGTCACCTCTGATGACAGGG +
Preference number: 5 (lower is better)
Translates to: ACPCQASATDRAAGACCSSLDSS*SPLMTG
Trigger: CCCTGTCATCAGAGGTGACAAAGATGAGTCCAGTGA...ACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGCGTAAAGGCCATCCCTaGCTGAAGGGCTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRRKGHP*LKGWSG
Trigger: TCCAGACCAGCCCTTCAGCAAGGGATGGCCTTTACG...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCGGCGGAGCTGCGGCTTaGCTCCTCCCGTGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLGGAAA*LLPCGW
Trigger: CCAGCCGCACGGGAGGAGCAAAGCCGCAGCTCCGCC...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 90 bp GCGGGGTTTCCTTCGTGGGGATCTCAAAGTAGCTGGGCTCACGTCTaGACGAGTAGTCTGGTGGCTCGGCGGGAGCACGGCAGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: AGFPSWGSQSSWAHV*TSSLVARREHGSCP
Trigger: TGGACAGCTGCCGTGCTCCCGCCGAGCCACCAGACTACTCGTTCAGACGTGAGCCCAGCTACTTTGAGATCCCCACGAAGGAAACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 90 bp GCTGCCAGGGCTGTCTCAGTCTCCTTCAAGATCAGGTGGGTGTCCTaGGCGTGGAAGTCCAGGCGTGAGGCACGGGCTGCAGCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: AARAVSVSFKIRWVS*AWKSRREARAAAKS
Trigger: AGACTTGGCTGCAGCCCGTGCCTCACGCCTGGACTTCCACGCTCAGGACACCCACCTGATCTTGAAGGAGACTGAGACAGCCCTGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp TGCTCCATCTGGGGAGCCATGCCTGGTGCTCGGGAGGCAAACTCTTaGAGCAAAGCCATCCGCTGGGCCATGCCCCCATCACTGGACTCA +
Preference number: 5 (lower is better)
Translates to: CSIWGAMPGAREANS*SKAIRWAMPPSLDS
Trigger: TGAGTCCAGTGATGGGGGCATGGCCCAGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCGAGCACCAGGCATGGCTCCCCAGATGGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp TGGGACCAAGAGGCTCTGCTGCTCCATCTGGGGAGCCATGCCTGGTaGTCGGGAGGCAAACTCTTGCAGCAAAGCCATCCGCTGGGCCAT +
Preference number: 5 (lower is better)
Translates to: WDQEALLLHLGSHAW*SGGKLLQQSHPLGH
Trigger: ATGGCCCAGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCGAGCACCAGGCATGGCTCCCCAGATGGAGCAGCAGAGCCTCTTGGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GAGAAGCCAGTACGGGCAGGGGCAGTCCCACCAACACCTGCCTCCTaGTCTTTTGTGGGCACTTCCTGGGTAGGCACCTCAGGGAGCCTT +
Preference number: 5 (lower is better)
Translates to: EKPVRAGAVPPTPAS*SFVGTSWVGTSGSL
Trigger: AAGGCTCCCTGAGGTGCCTACCCAGGAAGTGCCCACAAAAGACCAGGAGGCAGGTGTTGGTGGGACTGCCCCTGCCCGTACTGGCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092279.7
CDS CCA 90 bp CCGGGCAAAGGTCAGAGTCTCCTTGGGTGGAGCTGGGTCAGGCTCTaGGGACCGACCACTGCGCAACTGGATCACCATCCTCCCATTGGA +
Preference number: 5 (lower is better)
Translates to: PGKGQSLLGWSWVRL*GPTTAQLDHHPPIG
Trigger: TCCAATGGGAGGATGGTGATCCAGTTGCGCAGTGGTCGGTCCCCAGAGCCTGACCCAGCTCCACCCAAGGAGACTCTGACCTTTGCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp CCCGCTTCCGGGGCATGGCCAGGATGTCCAAGCGTGTCAGTTTCTTaGCCTGCTCAGGGGCAGCACGATTTGCTGGTTCAGGGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: PASGAWPGCPSVSVS*PAQGQHDLLVQGWL
Trigger: CAGCCAACCCTGAACCAGCAAATCGTGCTGCCCCTGAGCAGGCCAAGAAACTGACACGCTTGGACATCCTGGCCATGCCCCGGAAGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCAAGTGCATCACCCCTCTaGGGCGCAGAGACCTTGACG +
Preference number: 5 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSSASPL*GAETLT
Trigger: CGTCAAGGTCTCTGCGCCCAAGAGGGGTGATGCACT...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCGTAGCAGCAGCCTTCTaGGCAGCAGCACGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: GKWPPSWAVWGHAKPIQLVAAAF*AAARAS
Trigger: TGAGGCCCGTGCTGCTGCCAAGAAGGCTGCTGCTAC...GAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGGCTAGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGGGGTCCACGATGGCATaGATGACTTCTAACTGCTTC +
Preference number: 5 (lower is better)
Translates to: GLGWEACGGGGAMGWMKWGSTMA*MTSNCF
Trigger: GAAGCAGTTAGAAGTCATCAATGCCATCGTGGACCC...CCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCTAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATCCGAGGCAGGTGAAGTaGAGCTCTGAGCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHPRQVK*SSELLA
Trigger: GGCCAGCAGCTCAGAGCTCAACTTCACCTGCCTCGG...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCCGAGGCAGGTGAAGTaGAGCTCTGAGCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GKWPPSWAVWGHAKPIQLPRQVK*SSELLA
Trigger: GGCCAGCAGCTCAGAGCTCAACTTCACCTGCCTCGG...GAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp TGCCCGCACCATCTGGGACGGCAGGGGCAGGTACATGGTTTAGATCACAAAGCCAGCCAGTCGGCCACCTaGGTTTCGGCCGAGACCGTC +
Preference number: 5 (lower is better)
Translates to: CPHHLGRQGQVHGLDHKASQSAT*VSAETV
Trigger: GACGGTCTCGGCCGAAACCAAGGTGGCCGACTGGCT...GGCTTTGTGATCTAAACCATGTACCTGCCCCTGCCGTCCCAGATGGTGCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GTCCCAGAGCACACCCATGCCAGCCTGGTCAATAAGGGACTGTCCCCATCCCACGACACCGAAGCAGTCTaGGCCAAGGGGTCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: VPEHTHASLVNKGLSPSHDTEAV*AKGSSE
Trigger: CTCGGAGGACCCCTTGGCCAAGACTGCTTCGGTGTC...GTGGGATGGGGACAGTCCCTTATTGACCAGGCTGGCATGGGTGTGCTCTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCAGACACCGAAGCAGTCTaGGCCAAGGGGTCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMADTEAV*AKGSSE
Trigger: CTCGGAGGACCCCTTGGCCAAGACTGCTTCGGTGTC...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp TGCCCGCACCATCTGGGACGGCAGGGGCAGGTACATGGTTTAGATCACAAAGCCTCTCGGGGGCAGGTCTaGTGGCTGGGGAACTGTCCC +
Preference number: 5 (lower is better)
Translates to: CPHHLGRQGQVHGLDHKASRGQV*WLGNCP
Trigger: GGGACAGTTCCCCAGCCACAAGACCTGCCCCCGAGA...GGCTTTGTGATCTAAACCATGTACCTGCCCCTGCCGTCCCAGATGGTGCGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACTCGGGAGGCAAACTCTaGCAGCAAAGCCATCCGCTG +
Preference number: 5 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHSGGKL*QQSHPL
Trigger: CAGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCGA...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGCCCACAAATGATTTCTaGGGGAAGGTGGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: RIGPQEPAAVTTSCPHHLPTNDF*GKVASP
Trigger: TGGGGAGGCCACCTTCCCCAAGAAATCATTTGTGGG...CAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTCGTAAAGGCCATCCCTaGCTGAAGGGCTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKARKGHP*LKGWSG
Trigger: TCCAGACCAGCCCTTCAGCAAGGGATGGCCTTTACG...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACCGTAAAGGCCATCCCTaGCTGAAGGGCTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHRKGHP*LKGWSG
Trigger: TCCAGACCAGCCCTTCAGCAAGGGATGGCCTTTACG...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CGCAGGAGCCTGCTGCAGTTACCACTTCCTGCCCGCACCATCTGGGACGGCAGGCTGGAGTCTGGGGTGTaGTTGGGCTGGGACCATTTT +
Preference number: 5 (lower is better)
Translates to: RRSLLQLPLPARTIWDGRLESGV*LGWDHF
Trigger: AAAATGGTCCCAGCCCAACAACACCCCAGACTCCAG...CCTGCCGTCCCAGATGGTGCGGGCAGGAAGTGGTAACTGCAGCAGGCTCCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS TCA 90 bp CTCTCCGGTTCTGCGCCCAGGACCGTCCTCTGGCAAACCAGCATCTaGGTAGCTGTCAGCCAGGCTAGCCCATCGGGAAACCCACTTCTG +
Preference number: 5 (lower is better)
Translates to: LSGSAPRTVLWQTSI*VAVSQASPSGNPLL
Trigger: CAGAAGTGGGTTTCCCGATGGGCTAGCCTGGCTGACAGCTACTCAGATGCTGGTTTGCCAGAGGACGGTCCTGGGCGCAGAACCGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp GAGAACCTGGGACCAAGAGGCTCTGCTGCTCCATCTGGGGAGCCATaGCTGGTGCTCGGGAGGCAAACTCTTGCAGCAAAGCCATCCGCT +
Preference number: 5 (lower is better)
Translates to: ENLGPRGSAAPSGEP*LVLGRQTLAAKPSA
Trigger: AGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCGAGCACCAGGCATGGCTCCCCAGATGGAGCAGCAGAGCCTCTTGGTCCCAGGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp ACTGAGACTATCAGGGTCCAGGTCTTCCTGGCCTATGAGGCAGTTTaGTGGCTCACTGCCCAGCTCTGGTGGCCCTGGGCCATTCCGCCT +
Preference number: 5 (lower is better)
Translates to: TETIRVQVFLAYEAV*WLTAQLWWPWAIPP
Trigger: AGGCGGAATGGCCCAGGGCCACCAGAGCTGGGCAGTGAGCCAGCAAACTGCCTCATAGGCCAGGAAGACCTGGACCCTGATAGTCTCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp TTCCGGGGCATGGCCAGGATGTCCAAGCGTGTCAGTTTCTTGGCCTaGTCAGGGGCAGCACGATTTGCTGGTTCAGGGTTGGCTGCGGTC +
Preference number: 5 (lower is better)
Translates to: FRGMARMSKRVSFLA*SGAARFAGSGLAAV
Trigger: GACCGCAGCCAACCCTGAACCAGCAAATCGTGCTGCCCCTGAGCAGGCCAAGAAACTGACACGCTTGGACATCCTGGCCATGCCCCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp CCTCAGCTATCGTGGGCTTACGGCTGGTGCTGTAGAGCTCAGCACTaGGACCGGAGAAGCCAGTACGGGCAGGGGCAGTCTCAGAATCAC +
Preference number: 5 (lower is better)
Translates to: PQLSWAYGWCCRAQH*DRRSQYGQGQSQNH
Trigger: GTGATTCTGAGACTGCCCCTGCCCGTACTGGCTTCTCCGGTCGCAGTGCTGAGCTCTACAGCACCAGCCGTAAGCCCACGATAGCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp TCACATTCATCACGCCCCACGAAGATGAGTTCACGCGGGAGCCGGTaGCGGGTGCCACTGCTGCTCACCAGGAACCAAGATGTGACGCTC +
Preference number: 5 (lower is better)
Translates to: SHSSRPTKMSSRGSR*RVPLLLTRNQDVTL
Trigger: GAGCGTCACATCTTGGTTCCTGGTGAGCAGCAGTGGCACCCGCCACCGGCTCCCGCGTGAACTCATCTTCGTGGGGCGTGATGAATGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GAGCACGGCAGCTGTCCAGCTCACCATTTTGCTGTGCCAGGTCCTTaGGACGCTCTGAGTAGGGCTCCTCCTGGTGCCGGTCTTCAGATG +
Preference number: 5 (lower is better)
Translates to: EHGSCPAHHFAVPGP*DALSRAPPGAGLQM
Trigger: CATCTGAAGACCGGCACCAGGAGGAGCCCTACTCAGAGCGTCCCAAGGACCTGGCACAGCAAAATGGTGAGCTGGACAGCTGCCGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp ACCTTGCCTGGACTGCAGTCATCAAACTCAATGGTGAAGGAGGCGTaGCTCTGCACCACAGGGGCCGTCCCACCAACACCTGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TLPGLQSSNSMVKEA*LCTTGAVPPTPASW
Trigger: CCAGGAGGCAGGTGTTGGTGGGACGGCCCCTGTGGTGCAGAGCCACGCCTCCTTCACCATTGAGTTTGATGACTGCAGTCCAGGCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAGCAGCAGGGCAGCAGTGCATCACCCCTCTaGGGCGCAGAGACCTTGACG +
Preference number: 5 (lower is better)
Translates to: ALWLSASRSISKGQQQGSSASPL*GAETLT
Trigger: CGTCAAGGTCTCTGCGCCCAAGAGGGGTGATGCACT...GCTGCCCTGCTGCTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CCCATCCAGCTCCTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTAGTGCATCACCCCTCTaGGGCGCAGAGACCTTGACG +
Preference number: 5 (lower is better)
Translates to: PIQLLCLALTGPRVQLLSSASPL*GAETLT
Trigger: CGTCAAGGTCTCTGCGCCCAAGAGGGGTGATGCACT...AGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAGGAGCTGGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAGTGCATCACCCCTCTaGGGCGCAGAGACCTTGACG +
Preference number: 5 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLSASPL*GAETLT
Trigger: CGTCAAGGTCTCTGCGCCCAAGAGGGGTGATGCACT...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTGCACCTCAGGGAGCCTaGGAGGCTGCGGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTAPQGA*EAAGFP
Trigger: AGGAAACCCCGCAGCCTCCAAGGCTCCCTGAGGTGC...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp TGCCCGCACCATCTGGGACGGCAGGGGCAGGTACATGGTTTAGATCACAAAGCCGTAGCAGCAGCCTTCTaGGCAGCAGCACGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: CPHHLGRQGQVHGLDHKAVAAAF*AAARAS
Trigger: TGAGGCCCGTGCTGCTGCCAAGAAGGCTGCTGCTAC...GGCTTTGTGATCTAAACCATGTACCTGCCCCTGCCGTCCCAGATGGTGCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCCGAGGCAGGTGAAGTaGAGCTCTGAGCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: QGKWPPSWAVWGHAKPIQPRQVK*SSELLA
Trigger: GGCCAGCAGCTCAGAGCTCAACTTCACCTGCCTCGG...CTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGCCCGGCGCAGCAGGCTaGGGTCGTTCTGCACCAGCC +
Preference number: 5 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQPGAAG*GRSAPA
Trigger: GGCTGGTGCAGAACGACCCAAGCCTGCTGCGCCGGG...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGACAGGAAGGTCGCTTTaGGTGCTGTGGCGGTCATCC +
Preference number: 5 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGTGRSL*VLWRSS
Trigger: GGATGACCGCCACAGCACCAAAAGCGACCTTCCTGT...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGGTGCCATCCTCATGCTaGTGGCCCTTCAGAGTTCGA +
Preference number: 5 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALVPSSC*WPFRVR
Trigger: TCGAACTCTGAAGGGCCACAAGCATGAGGATGGCAC...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp AATCCACTCAGGAGAGCTTGCTGGGACAGTACCCAAACTCAGTGGGTTTGGCAGGAGGCGGTGGGGTGGTaGAGGGGGTCACAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: NPLRRACWDSTQTQWVWQEAVGW*RGSQGW
Trigger: CCAGCCCTGTGACCCCCTCAACCACCCCACCGCCTC...CTGCCAAACCCACTGAGTTTGGGTACTGTCCCAGCAAGCTCTCCTGAGTGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGTCACTGGACTCATCTTaGTCACCTCTGATGACAGGG +
Preference number: 5 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRSLDSS*SPLMTG
Trigger: CCCTGTCATCAGAGGTGACAAAGATGAGTCCAGTGA...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp TGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCATGGGGCTATGGCACACTCGTCTGCAGACTaGGAGCGGAGTCGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: CWLRRVWKWEAPIHGAMAHSSAD*ERSRAS
Trigger: GGAAGCTCGACTCCGCTCCAAGTCTGCAGACGAGTG...TGCCATAGCCCCATGGATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCCACTCGTCTGCAGACTaGGAGCGGAGTCGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLHSSAD*ERSRAS
Trigger: GGAAGCTCGACTCCGCTCCAAGTCTGCAGACGAGTG...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGAAGCGTGTCAGTTTCTaGGCCTGCTCAGGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGKRVSF*ACSGAA
Trigger: TGCTGCCCCTGAGCAGGCCAAGAAACTGACACGCTT...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTAAGCGTGTCAGTTTCTaGGCCTGCTCAGGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCKRVSF*ACSGAA
Trigger: TGCTGCCCCTGAGCAGGCCAAGAAACTGACACGCTT...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp GTCCAAGCGTGTCAGTTTCTTGGCCTGCTCAGGGGCAGCACGATTTaGTGGTTCAGGGTTGGCTGCGGTCCCTCGTTCACCATCCACAGC +
Preference number: 5 (lower is better)
Translates to: VQACQFLGLLRGSTI*WFRVGCGPSFTIHS
Trigger: GCTGTGGATGGTGAACGAGGGACCGCAGCCAACCCTGAACCAGCAAATCGTGCTGCCCCTGAGCAGGCCAAGAAACTGACACGCTTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GGGGATCTCAAAGTAGCTGGGCTCACGTCTGAACGAGTAGTCTGGTaGCTCGGCGGGAGCACGGCAGCTGTCCAGCTCACCATTTTGCTG +
Preference number: 5 (lower is better)
Translates to: GDLKVAGLTSERVVW*LGGSTAAVQLTILL
Trigger: CAGCAAAATGGTGAGCTGGACAGCTGCCGTGCTCCCGCCGAGCCACCAGACTACTCGTTCAGACGTGAGCCCAGCTACTTTGAGATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp CGTGGGGATCTCAAAGTAGCTGGGCTCACGTCTGAACGAGTAGTCTaGTGGCTCGGCGGGAGCACGGCAGCTGTCCAGCTCACCATTTTG +
Preference number: 5 (lower is better)
Translates to: RGDLKVAGLTSERVV*WLGGSTAAVQLTIL
Trigger: CAAAATGGTGAGCTGGACAGCTGCCGTGCTCCCGCCGAGCCACCAGACTACTCGTTCAGACGTGAGCCCAGCTACTTTGAGATCCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GTTTCTTGGCCTGCTCAGGGGCAGCACGATTTGCTGGTTCAGGGTTaGCTGCGGTCCCTCGTTCACCATCCACAGCCTCAGTGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: VSWPAQGQHDLLVQG*LRSLVHHPQPQCLR
Trigger: CCTCAGACACTGAGGCTGTGGATGGTGAACGAGGGACCGCAGCCAACCCTGAACCAGCAAATCGTGCTGCCCCTGAGCAGGCCAAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp CAAGCGTGTCAGTTTCTTGGCCTGCTCAGGGGCAGCACGATTTGCTaGTTCAGGGTTGGCTGCGGTCCCTCGTTCACCATCCACAGCCTC +
Preference number: 5 (lower is better)
Translates to: QACQFLGLLRGSTIC*FRVGCGPSFTIHSL
Trigger: GAGGCTGTGGATGGTGAACGAGGGACCGCAGCCAACCCTGAACCAGCAAATCGTGCTGCCCCTGAGCAGGCCAAGAAACTGACACGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTTTGGGCGCAGAGACCTaGACGCTCACCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTLGAET*TLTCSW
Trigger: CCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCAA...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGGGAGCTGATTTCCTTGTaGGATGTCTTCAGGATGGGT +
Preference number: 5 (lower is better)
Translates to: GWEACGGGGAMGWMKWFRELISL*DVFRMG
Trigger: ACCCATCCTGAAGACATCCAACAAGGAAATCAGCTC...CCTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGACAGGAAGGTCGCTTTaGGTGCTGTGGCGGTCATCC +
Preference number: 5 (lower is better)
Translates to: ESITSSEPVPARPPQRIGTGRSL*VLWRSS
Trigger: GGATGACCGCCACAGCACCAAAAGCGACCTTCCTGT...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CAGGCTGGGCCTGGACCTAAGCGGGGCCTGCAAGTTCCTGCAAGGGAGCAATGTGTGCCATCCTCATGCTaGTGGCCCTTCAGAGTTCGA +
Preference number: 5 (lower is better)
Translates to: QAGPGPKRGLQVPAREQCVPSSC*WPFRVR
Trigger: TCGAACTCTGAAGGGCCACAAGCATGAGGATGGCAC...ACATTGCTCCCTTGCAGGAACTTGCAGGCCCCGCTTAGGTCCAGGCCCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCTCTCGGGGGCAGGTCTaGTGGCTGGGGAACTGTCCC +
Preference number: 5 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLSRGQV*WLGNCP
Trigger: GGGACAGTTCCCCAGCCACAAGACCTGCCCCCGAGA...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCTCGGGAGGCAAACTCTaGCAGCAAAGCCATCCGCTG +
Preference number: 5 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSSGGKL*QQSHPL
Trigger: CAGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCGA...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCCGTAAAGGCCATCCCTaGCTGAAGGGCTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLRKGHP*LKGWSG
Trigger: TCCAGACCAGCCCTTCAGCAAGGGATGGCCTTTACG...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp CCTGGACTGCAGTCATCAAACTCAATGGTGAAGGAGGCGTGGCTCTaGACCACAGGGGCCGTCCCACCAACACCTGCCTCCTGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: PGLQSSNSMVKEAWL*TTGAVPPTPASWSF
Trigger: AAAAGACCAGGAGGCAGGTGTTGGTGGGACGGCCCCTGTGGTGCAGAGCCACGCCTCCTTCACCATTGAGTTTGATGACTGCAGTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp GTCTTGGCCAAGGGGTCCTCCGAGTCGCTCTGTGTGCCATCCTCATaGTTGTGGCCCTTCAGAGTTCGAGTGTGGACAGGAAGGTCGCTT +
Preference number: 5 (lower is better)
Translates to: VLAKGSSESLCVPSS*LWPFRVRVWTGRSL
Trigger: AAGCGACCTTCCTGTCCACACTCGAACTCTGAAGGGCCACAAGCATGAGGATGGCACACAGAGCGACTCGGAGGACCCCTTGGCCAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp ACACCGAAGCAGTCTTGGCCAAGGGGTCCTCCGAGTCGCTCTGTGTaGCATCCTCATGCTTGTGGCCCTTCAGAGTTCGAGTGTGGACAG +
Preference number: 5 (lower is better)
Translates to: TPKQSWPRGPPSRSV*HPHACGPSEFECGQ
Trigger: CTGTCCACACTCGAACTCTGAAGGGCCACAAGCATGAGGATGGCACACAGAGCGACTCGGAGGACCCCTTGGCCAAGACTGCTTCGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp ATCACACTCGTCTGCAGACTTGGAGCGGAGTCGAGCTTCCAGGGCTaGCAGGGCTGTCTCAGTCTCCTTCAAGATCAGGTGGGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: ITLVCRLGAESSFQG*QGCLSLLQDQVGVL
Trigger: CAGGACACCCACCTGATCTTGAAGGAGACTGAGACAGCCCTGGCAGCCCTGGAAGCTCGACTCCGCTCCAAGTCTGCAGACGAGTGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GCCAAGGGGTCCTCCGAGTCGCTCTGTGTGCCATCCTCATGCTTGTaGCCCTTCAGAGTTCGAGTGTGGACAGGAAGGTCGCTTTTGGTG +
Preference number: 5 (lower is better)
Translates to: AKGSSESLCVPSSCL*PFRVRVWTGRSLLV
Trigger: CACCAAAAGCGACCTTCCTGTCCACACTCGAACTCTGAAGGGCCACAAGCATGAGGATGGCACACAGAGCGACTCGGAGGACCCCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp TCTGACCCACTGGCATCACTGAGACTATCAGGGTCCAGGTCTTCCTaGCCTATGAGGCAGTTTGCTGGCTCACTGCCCAGCTCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: SDPLASLRLSGSRSS*PMRQFAGSLPSSGG
Trigger: GCCACCAGAGCTGGGCAGTGAGCCAGCAAACTGCCTCATAGGCCAGGAAGACCTGGACCCTGATAGTCTCAGTGATGCCAGTGGGTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTTTCACAAATGTCCCATaGAGACTGCCCAGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKAFTNVP*RLPRSF
Trigger: GAAGGACCTGGGCAGTCTCAATGGGACATTTGTGAA...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTGTTCACAAATGTCCCATaGAGACTGCCCAGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GGPWDGCTGHTRRRRLALFTNVP*RLPRSF
Trigger: GAAGGACCTGGGCAGTCTCAATGGGACATTTGTGAA...CAAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCCCCACAAATGATTTCTaGGGGAAGGTGGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSPTNDF*GKVASP
Trigger: TGGGGAGGCCACCTTCCCCAAGAAATCATTTGTGGG...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAGCAGCAGGGCAGCCCCACAAATGATTTCTaGGGGAAGGTGGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: ALWLSASRSISKGQQQGSPTNDF*GKVASP
Trigger: TGGGGAGGCCACCTTCCCCAAGAAATCATTTGTGGG...GCTGCCCTGCTGCTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCCACTCGTCTGCAGACTaGGAGCGGAGTCGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPIHSSAD*ERSRAS
Trigger: GGAAGCTCGACTCCGCTCCAAGTCTGCAGACGAGTG...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAGCAGCAGGGCAGCCTGGAGTCTGGGGTGTaGTTGGGCTGGGACCATTTT +
Preference number: 5 (lower is better)
Translates to: ALWLSASRSISKGQQQGSLESGV*LGWDHF
Trigger: AAAATGGTCCCAGCCCAACAACACCCCAGACTCCAG...GCTGCCCTGCTGCTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCCTGGAGTCTGGGGTGTaGTTGGGCTGGGACCATTTT +
Preference number: 5 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSLESGV*LGWDHF
Trigger: AAAATGGTCCCAGCCCAACAACACCCCAGACTCCAG...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp ATGCCTGGTGCTCGGGAGGCAAACTCTTGCAGCAAAGCCATCCGCTaGGCCATGCCCCCATCACTGGACTCATCTTTGTCACCTCTGATG +
Preference number: 5 (lower is better)
Translates to: MPGAREANSCSKAIR*AMPPSLDSSLSPLM
Trigger: CATCAGAGGTGACAAAGATGAGTCCAGTGATGGGGGCATGGCCCAGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCGAGCACCAGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTAAGCGGATGACGTCATaGAGCTTCAGTGTGATGTAC +
Preference number: 5 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKAKRMTS*SFSVMY
Trigger: GTACATCACACTGAAGCTCAATGACGTCATCCGCTT...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp TGCCAGGCCTCCGCAACGGATCGGGCCGCAGGAGCCTGCTGCAGTTACCACTTCATGGAGCTGATTTCCTaGTTGGATGTCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: CQASATDRAAGACCSYHFMELIS*LDVFRM
Trigger: CATCCTGAAGACATCCAACAAGGAAATCAGCTCCAT...GAAGTGGTAACTGCAGCAGGCTCCTGCGGCCCGATCCGTTGCGGAGGCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp AGGCTGGGAGGCCTGTGGAGGTGGGGGCGCCATGGGCTGGATGAAGTGGTTCAGTCTTTGATTTTCACCTaGCCTGGACTGCAGTCATCA +
Preference number: 5 (lower is better)
Translates to: RLGGLWRWGRHGLDEVVQSLIFT*PGLQSS
Trigger: TGATGACTGCAGTCCAGGCAAGGTGAAAATCAAAGA...CTGAACCACTTCATCCAGCCCATGGCGCCCCCACCTCCACAGGCCTCCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCACTCGCCACAACCAACGGGATTGCTGGCCCACCTAGCTACACCCAGCCCCACTGGCGCAGGGAGAACTaGGTGATATGGTCTTTGATT +
Preference number: 5 (lower is better)
Translates to: ALATTNGIAGPPSYTQPHWRREN*VIWSLI
Trigger: AATCAAAGACCATATCACCAAGTTCTCCCTGCGCCA...GTGGGGCTGGGTGTAGCTAGGTGGGCCAGCAATCCCGTTGGTTGTGGCGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp ACGCCCACACACACATCAGGCAGGTCCCAGAGCACACCCATGCCAGCCTGGTCATCACTGGACTCATCTTaGTCACCTCTGATGACAGGG +
Preference number: 5 (lower is better)
Translates to: TPTHTSGRSQSTPMPAWSSLDSS*SPLMTG
Trigger: CCCTGTCATCAGAGGTGACAAAGATGAGTCCAGTGA...TGACCAGGCTGGCATGGGTGTGCTCTGGGACCTGCCTGATGTGTGTGTGGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGATCGGGAGGCAAACTCTaGCAGCAAAGCCATCCGCTG +
Preference number: 5 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRSGGKL*QQSHPL
Trigger: CAGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCGA...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCAAGCGTGTCAGTTTCTaGGCCTGCTCAGGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPIKRVSF*ACSGAA
Trigger: TGCTGCCCCTGAGCAGGCCAAGAAACTGACACGCTT...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACAAAGCGTGTCAGTTTCTaGGCCTGCTCAGGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTKRVSF*ACSGAA
Trigger: TGCTGCCCCTGAGCAGGCCAAGAAACTGACACGCTT...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GTCCCAGAGCACACCCATGCCAGCCTGGTCAATAAGGGACTGTCCCCATCCCACTTCACAAATGTCCCATaGAGACTGCCCAGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: VPEHTHASLVNKGLSPSHFTNVP*RLPRSF
Trigger: GAAGGACCTGGGCAGTCTCAATGGGACATTTGTGAA...GTGGGATGGGGACAGTCCCTTATTGACCAGGCTGGCATGGGTGTGCTCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGTTCACAAATGTCCCATaGAGACTGCCCAGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: ESITSSEPVPARPPQRIGFTNVP*RLPRSF
Trigger: GAAGGACCTGGGCAGTCTCAATGGGACATTTGTGAA...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CCAGGCAGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTACTTCATTCTCAGAGTaGATTCTGGCCTCTAAGTCC +
Preference number: 5 (lower is better)
Translates to: PGRWAVGWMHRTHAQKKATSFSE*ILASKS
Trigger: GGACTTAGAGGCCAGAATCAACTCTGAGAATGAAGT...AGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGTACATGGTTTAGATCACAAAGCCAGGAGCTTCCAAATCTCTTTCTGCCACTCGAGGCGGTGGGGTGGTaGAGGGGGTCACAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: GTWFRSQSQELPNLFLPLEAVGW*RGSQGW
Trigger: CCAGCCCTGTGACCCCCTCAACCACCCCACCGCCTC...GAGTGGCAGAAAGAGATTTGGAAGCTCCTGGCTTTGTGATCTAAACCATGTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp ACAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCACCCACAAATGATTTCTaGGGGAAGGTGGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: TRQVASFLGSLGTCQTHPPTNDF*GKVASP
Trigger: TGGGGAGGCCACCTTCCCCAAGAAATCATTTGTGGG...TGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 90 bp GCCCGGCCTGTATTCTGGAAGAGGACCTTCATCTTCTCAGCAAGATaGTCCGTGTTTTCACGAATGGCATGTGACAGCTGGGACACCGGG +
Preference number: 5 (lower is better)
Translates to: ARPVFWKRTFIFSAR*SVFSRMACDSWDTG
Trigger: CCCGGTGTCCCAGCTGTCACATGCCATTCGTGAAAACACGGAGCATCTTGCTGAGAAGATGAAGGTCCTCTTCCAGAATACAGGCCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp ACTGTTGGTGGAGACAATGGGCTCTCCTTCTGTGGTCCTGGAGTCTaGGGTGTTGTTGGGCTGGGACCATTTTTGCCGCTGAGCAAGCTA +
Preference number: 5 (lower is better)
Translates to: TVGGDNGLSFCGPGV*GVVGLGPFLPLSKL
Trigger: TAGCTTGCTCAGCGGCAAAAATGGTCCCAGCCCAACAACACCCCAGACTCCAGGACCACAGAAGGAGAGCCCATTGTCTCCACCAACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCGGATGACGTCATaGAGCTTCAGTGTGATGTAC +
Preference number: 5 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLKRMTS*SFSVMY
Trigger: GTACATCACACTGAAGCTCAATGACGTCATCCGCTT...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCAAGCGGATGACGTCATaGAGCTTCAGTGTGATGTAC +
Preference number: 5 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSKRMTS*SFSVMY
Trigger: GTACATCACACTGAAGCTCAATGACGTCATCCGCTT...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp AGGTGGGCCGTGGGATGGATGCACAGGACACACGCGCAGAAGAAGGCTGGCCTTACTTCATTCTCAGAGTaGATTCTGGCCTCTAAGTCC +
Preference number: 5 (lower is better)
Translates to: RWAVGWMHRTHAQKKAGLTSFSE*ILASKS
Trigger: GGACTTAGAGGCCAGAATCAACTCTGAGAATGAAGT...AAGGCCAGCCTTCTTCTGCGCGTGTGTCCTGTGCATCCATCCCACGGCCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGTGTTTGGCACTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCGAGCTGATTTCCTTGTaGGATGTCTTCAGGATGGGT +
Preference number: 5 (lower is better)
Translates to: LCLALTGPRVQLLSLSGLELISL*DVFRMG
Trigger: ACCCATCCTGAAGACATCCAACAAGGAAATCAGCTC...GAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAGTGCCAAACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGTGGCGCAGGGAGAACTaGGTGATATGGTCTTTGATT +
Preference number: 5 (lower is better)
Translates to: ESITSSEPVPARPPQRIGWRREN*VIWSLI
Trigger: AATCAAAGACCATATCACCAAGTTCTCCCTGCGCCA...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCGTGCCATCCTCATGCTaGTGGCCCTTCAGAGTTCGA +
Preference number: 5 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLVPSSC*WPFRVR
Trigger: TCGAACTCTGAAGGGCCACAAGCATGAGGATGGCAC...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTCTCGATGACAAAGGCTaGCTGGTTGTGCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCLDDKG*LVVQQL
Trigger: GAGCTGCTGCACAACCAGCAAGCCTTTGTCATCGAG...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTCTCGATGACAAAGGCTaGCTGGTTGTGCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLLDDKG*LVVQQL
Trigger: GAGCTGCTGCACAACCAGCAAGCCTTTGTCATCGAG...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS TCA 90 bp ACTGGGAGCGTTTCTTACGGGGTGTGTCCCCATCGAAGAACTCGATaGCAAAGGCTTGCTGGTTGTGCAGCAGCTCTTGAGGGTCCCTTT +
Preference number: 5 (lower is better)
Translates to: TGSVSYGVCPHRRTR*QRLAGCAAALEGPF
Trigger: AAAGGGACCCTCAAGAGCTGCTGCACAACCAGCAAGCCTTTGTCATCGAGTTCTTCGATGGGGACACACCCCGTAAGAAACGCTCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 90 bp AAAACCTGGTCGATCATCCTCCGAGCCTCCTCCACTTCTTGGTCTTaGGCCTCTGTCTCAATGGTGTACGTGCCTGCGTCGCTAAGACTG +
Preference number: 5 (lower is better)
Translates to: KTWSIILRASSTSWS*ASVSMVYVPASLRL
Trigger: CAGTCTTAGCGACGCAGGCACGTACACCATTGAGACAGAGGCTCAAGACCAAGAAGTGGAGGAGGCTCGGAGGATGATCGACCAGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCTTCACAAATGTCCCATaGAGACTGCCCAGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPIFTNVP*RLPRSF
Trigger: GAAGGACCTGGGCAGTCTCAATGGGACATTTGTGAA...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCTCTTTGGCTTAGTGCCTCCAGAAGCATCAGCAAGGGGCAGCAGCAGGGCAGCACTTCATTCTCAGAGTaGATTCTGGCCTCTAAGTCC +
Preference number: 5 (lower is better)
Translates to: ALWLSASRSISKGQQQGSTSFSE*ILASKS
Trigger: GGACTTAGAGGCCAGAATCAACTCTGAGAATGAAGT...GCTGCCCTGCTGCTGCCCCTTGCTGATGCTTCTGGAGGCACTAAGCCAAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGGAGCTGATTTCCTTGTaGGATGTCTTCAGGATGGGT +
Preference number: 5 (lower is better)
Translates to: QGKWPPSWAVWGHAKPIQELISL*DVFRMG
Trigger: ACCCATCCTGAAGACATCCAACAAGGAAATCAGCTC...CTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATATGGAGCTGATTTCCTaGTTGGATGTCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHMELIS*LDVFRM
Trigger: CATCCTGAAGACATCCAACAAGGAAATCAGCTCCAT...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGAGGGTCCACGATGGCATaGATGACTTCTAACTGCTTC +
Preference number: 5 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRGSTMA*MTSNCF
Trigger: GAAGCAGTTAGAAGTCATCAATGCCATCGTGGACCC...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCGGGTCCACGATGGCATaGATGACTTCTAACTGCTTC +
Preference number: 5 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPIGSTMA*MTSNCF
Trigger: GAAGCAGTTAGAAGTCATCAATGCCATCGTGGACCC...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTGGGTCCACGATGGCATaGATGACTTCTAACTGCTTC +
Preference number: 5 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTGSTMA*MTSNCF
Trigger: GAAGCAGTTAGAAGTCATCAATGCCATCGTGGACCC...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GAAAGCATAACCAGTAGTGAGCCTGTCCCTGCCAGGCCTCCGCAACGGATCGGGTCTTTGATTTTCACCTaGCCTGGACTGCAGTCATCA +
Preference number: 5 (lower is better)
Translates to: ESITSSEPVPARPPQRIGSLIFT*PGLQSS
Trigger: TGATGACTGCAGTCCAGGCAAGGTGAAAATCAAAGA...CCCGATCCGTTGCGGAGGCCTGGCAGGGACAGGCTCACTACTGGTTATGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGACTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATTCTTTGATTTTCACCTaGCCTGGACTGCAGTCATCA +
Preference number: 5 (lower is better)
Translates to: LTGPRVQLLSLSGLKPAHSLIFT*PGLQSS
Trigger: TGATGACTGCAGTCCAGGCAAGGTGAAAATCAAAGA...ATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGGCCCCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGTTGGTGATATGGTCTTaGATTTTCACCTTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: LAPGSSSFLCLASSQHIGLVIWS*IFTLPG
Trigger: TCCAGGCAAGGTGAAAATCAAAGACCATATCACCAA...CCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp ATGGGCTGGATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGTCACTGGACTCATCTTaGTCACCTCTGATGACAGGG +
Preference number: 5 (lower is better)
Translates to: MGWMKWFRCWLRRVWKWESLDSS*SPLMTG
Trigger: CCCTGTCATCAGAGGTGACAAAGATGAGTCCAGTGA...CTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCATCCAGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTAAGCGGATGACGTCATaGAGCTTCAGTGTGATGTAC +
Preference number: 5 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTKRMTS*SFSVMY
Trigger: GTACATCACACTGAAGCTCAATGACGTCATCCGCTT...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGACTTCATTCTCAGAGTaGATTCTGGCCTCTAAGTCC +
Preference number: 5 (lower is better)
Translates to: QGKWPPSWAVWGHAKPIQTSFSE*ILASKS
Trigger: GGACTTAGAGGCCAGAATCAACTCTGAGAATGAAGT...CTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGAGAGCTGATTTCCTTGTaGGATGTCTTCAGGATGGGT +
Preference number: 5 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRELISL*DVFRMG
Trigger: ACCCATCCTGAAGACATCCAACAAGGAAATCAGCTC...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp TGCCCGCACCATCTGGGACGGCAGGGGCAGGTACATGGTTTAGATCACAAAGCCATGGAGCTGATTTCCTaGTTGGATGTCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: CPHHLGRQGQVHGLDHKAMELIS*LDVFRM
Trigger: CATCCTGAAGACATCCAACAAGGAAATCAGCTCCAT...GGCTTTGTGATCTAAACCATGTACCTGCCCCTGCCGTCCCAGATGGTGCGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CAAGGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGATGGAGCTGATTTCCTaGTTGGATGTCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: QGKWPPSWAVWGHAKPIQMELIS*LDVFRM
Trigger: CATCCTGAAGACATCCAACAAGGAAATCAGCTCCAT...CTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCGGGTCCACGATGGCATaGATGACTTCTAACTGCTTC +
Preference number: 5 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLGSTMA*MTSNCF
Trigger: GAAGCAGTTAGAAGTCATCAATGCCATCGTGGACCC...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCTTGGTGATATGGTCTTaGATTTTCACCTTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: GKWPPSWAVWGHAKPIQLLVIWS*IFTLPG
Trigger: TCCAGGCAAGGTGAAAATCAAAGACCATATCACCAA...GAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCAAGTGGCCTCCTTCCTGGGCAGTTTGGGGACATGCCAAACCCATCCAGCTCCTTGGTGATATGGTCTTaGATTTTCACCTTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: ASGLLPGQFGDMPNPSSSLVIWS*IFTLPG
Trigger: TCCAGGCAAGGTGAAAATCAAAGACCATATCACCAA...GGAGCTGGATGGGTTTGGCATGTCCCCAAACTGCCCAGGAAGGAGGCCACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp ACACCCAGCCCCACTGTAAGGAAGCCCAGTGTCCCTAGCTGGGATGAATCCACTTGGCGCAGGGAGAACTaGGTGATATGGTCTTTGATT +
Preference number: 5 (lower is better)
Translates to: TPSPTVRKPSVPSWDESTWRREN*VIWSLI
Trigger: AATCAAAGACCATATCACCAAGTTCTCCCTGCGCCA...AGTGGATTCATCCCAGCTAGGGACACTGGGCTTCCTTACAGTGGGGCTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp ATGAAGTGGTTCAGGTGCTGGCTGAGGAGGGTCTGGAAATGGGAGGCACCCATCTGGCGCAGGGAGAACTaGGTGATATGGTCTTTGATT +
Preference number: 5 (lower is better)
Translates to: MKWFRCWLRRVWKWEAPIWRREN*VIWSLI
Trigger: AATCAAAGACCATATCACCAAGTTCTCCCTGCGCCA...GATGGGTGCCTCCCATTTCCAGACCCTCCTCAGCCAGCACCTGAACCACTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 90 bp GTCAGAGCATCGTCTCGGCTGTCATTCATGTTCTGGTCCAAGTTGTaGGAGTTCATAGAGCCAGGCGGCACTTTCTGGAAGTTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VRASSRLSFMFWSKL*EFIEPGGTFWKFRL
Trigger: CAGCCTGAACTTCCAGAAAGTGCCGCCTGGCTCTATGAACTCTCACAACTTGGACCAGAACATGAATGACAGCCGAGACGATGCTCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp GAGTTGATTCTGGCCTCTAAGTCCTCCCAGGCCCGGCCTGTATTCTaGAAGAGGACCTTCATCTTCTCAGCAAGATGCTCCGTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: ELILASKSSQARPVF*KRTFIFSARCSVFS
Trigger: TGAAAACACGGAGCATCTTGCTGAGAAGATGAAGGTCCTCTTCCAGAATACAGGCCGGGCCTGGGAGGACTTAGAGGCCAGAATCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTAAGCGGATGACGTCATaGAGCTTCAGTGTGATGTAC +
Preference number: 5 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLKRMTS*SFSVMY
Trigger: GTACATCACACTGAAGCTCAATGACGTCATCCGCTT...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp TGGACTCTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGAGCTGATTTCCTTGTaGGATGTCTTCAGGATGGGT +
Preference number: 5 (lower is better)
Translates to: WTLQDSRLLTGSRLWAMCELISL*DVFRMG
Trigger: ACCCATCCTGAAGACATCCAACAAGGAAATCAGCTC...ACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CCAGGGTCCAGCTCCTTTCTCTGTCTGGCCTCAAGCCAGCACATAGGGATGAGAATGGAGCTGATTTCCTaGTTGGATGTCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: PGSSSFLCLASSQHIGMRMELIS*LDVFRM
Trigger: CATCCTGAAGACATCCAACAAGGAAATCAGCTCCAT...TCTCATCCCTATGTGCTGGCTTGAGGCCAGACAGAGAAAGGAGCTGGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTGCAGGACAGCCGTTTACTTACAGGGAGCAGGCTGTGGGCAATGTGTGGGACATCTTTGATTTTCACCTaGCCTGGACTGCAGTCATCA +
Preference number: 5 (lower is better)
Translates to: LQDSRLLTGSRLWAMCGTSLIFT*PGLQSS
Trigger: TGATGACTGCAGTCCAGGCAAGGTGAAAATCAAAGA...TGTCCCACACATTGCCCACAGCCTGCTCCCTGTAAGTAAACGGCTGTCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATCCCGGCGCAGCAGGCTaGGGTCGTTCTGCACCAGCC +
Preference number: 5 (lower is better)
Translates to: AREQCTLSFKATNKNNGDPGAAG*GRSAPA
Trigger: GGCTGGTGCAGAACGACCCAAGCCTGCTGCGCCGGG...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CTCCTCCAGACAAACAGCAAGCTCTACACACACACACACACACACACACACACACTCGATGACAAAGGCTaGCTGGTTGTGCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: LLQTNSKLYTHTHTHTHTLDDKG*LVVQQL
Trigger: GAGCTGCTGCACAACCAGCAAGCCTTTGTCATCGAG...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGCTTGCTGTTTGTCTGGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS CCA 90 bp GATTATCAAAGATCACCTCCTCACGGTTCCGAGGCCTCGTCTTGTTaGTCAGAGCATCGTCTCGGCTGTCATTCATGTTCTGGTCCAAGT +
Preference number: 5 (lower is better)
Translates to: DYQRSPPHGSEASSC*SEHRLGCHSCSGPS
Trigger: ACTTGGACCAGAACATGAATGACAGCCGAGACGATGCTCTGACCAACAAGACGAGGCCTCGGAACCGTGAGGAGGTGATCTTTGATAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GGAGGCACCCATCCATGGGGCTATGGCACATACAGGGTTTTCACAGAGAACCTCACTTCATTCTCAGAGTaGATTCTGGCCTCTAAGTCC +
Preference number: 5 (lower is better)
Translates to: GGTHPWGYGTYRVFTENLTSFSE*ILASKS
Trigger: GGACTTAGAGGCCAGAATCAACTCTGAGAATGAAGT...GAGGTTCTCTGTGAAAACCCTGTATGTGCCATAGCCCCATGGATGGGTGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 90 bp TTTCCTTGTTGGATGTCTTCAGGATGGGTACTTCATTCTCAGAGTTaGTTCTGGCCTCTAAGTCCTCCCAGGCCCGGCCTGTATTCTGGA +
Preference number: 5 (lower is better)
Translates to: FPCWMSSGWVLHSQS*FWPLSPPRPGLYSG
Trigger: TCCAGAATACAGGCCGGGCCTGGGAGGACTTAGAGGCCAGAATCAACTCTGAGAATGAAGTACCCATCCTGAAGACATCCAACAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp CACAGTGATGACCAAGGGTGGGAGGCATGGACTCTGCAGGACAGCCGTTTACTTTTGGTGATATGGTCTTaGATTTTCACCTTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: HSDDQGWEAWTLQDSRLLLVIWS*IFTLPG
Trigger: TCCAGGCAAGGTGAAAATCAAAGACCATATCACCAA...AAGTAAACGGCTGTCCTGCAGAGTCCATGCCTCCCACCCTTGGTCATCACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATAGCCAGTCGGCCACCTaGGTTTCGGCCGAGACCGTC +
Preference number: 5 (lower is better)
Translates to: AREQCTLSFKATNKNNGDSQSAT*VSAETV
Trigger: GACGGTCTCGGCCGAAACCAAGGTGGCCGACTGGCT...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp AAAGCGGATGACGTCATTGAGCTTCAGTGTGATGTACTTCTGGTCTaGGATGCGCACATCATTCACAAATGTCCCATTGAGACTGCCCAG +
Preference number: 5 (lower is better)
Translates to: KADDVIELQCDVLLV*DAHIIHKCPIETAQ
Trigger: CTGGGCAGTCTCAATGGGACATTTGTGAATGATGTGCGCATCCCAGACCAGAAGTACATCACACTGAAGCTCAATGACGTCATCCGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp AGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATTGACAGGGCACCTCAGGGAGCCTaGGAGGCTGCGGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: SNVLFPLKLPTKTMVIDRAPQGA*EAAGFP
Trigger: AGGAAACCCCGCAGCCTCCAAGGCTCCCTGAGGTGC...CCTGTCAATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATCCGAGGCAGGTGAAGTaGAGCTCTGAGCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: AREQCTLSFKATNKNNGDPRQVK*SSELLA
Trigger: GGCCAGCAGCTCAGAGCTCAACTTCACCTGCCTCGG...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp TTCTCAGCAAGATGCTCCGTGTTTTCACGAATGGCATGTGACAGCTaGGACACCGGGTTTAGCATCAGATTATCAAAGATCACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: FSARCSVFSRMACDS*DTGFSIRLSKITSS
Trigger: TGAGGAGGTGATCTTTGATAATCTGATGCTAAACCCGGTGTCCCAGCTGTCACATGCCATTCGTGAAAACACGGAGCATCTTGCTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 90 bp AGAGGACCTTCATCTTCTCAGCAAGATGCTCCGTGTTTTCACGAATaGCATGTGACAGCTGGGACACCGGGTTTAGCATCAGATTATCAA +
Preference number: 5 (lower is better)
Translates to: RGPSSSQQDAPCFHE*HVTAGTPGLASDYQ
Trigger: TTGATAATCTGATGCTAAACCCGGTGTCCCAGCTGTCACATGCCATTCGTGAAAACACGGAGCATCTTGCTGAGAAGATGAAGGTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS-3UTR CAA 90 bp GCAAGGGAGCAATGTACTCTTTCCTTTAAAGCTACCAACAAAAACAATGGTGATCACTCGTCTGCAGACTaGGAGCGGAGTCGAGCTTCC +
Preference number: 5 (lower is better)
Translates to: AREQCTLSFKATNKNNGDHSSAD*ERSRAS
Trigger: GGAAGCTCGACTCCGCTCCAAGTCTGCAGACGAGTG...ATCACCATTGTTTTTGTTGGTAGCTTTAAAGGAAAGAGTACATTGCTCCCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp CTGAGCGGTGGCGGAGCTGCGGCTTTGCTCCTCCCGTaGGGCTGGGGATGGTGGGGGAGCCGCTGGTTTCCG +
Preference number: 6 (lower is better)
Translates to: LSGGGAAALLLP*GWGWWGSRWFP
Trigger: CGGAAACCAGCGGCTCCCCCACCATCCCCAGCCGCACGGGAGGAGCAAAGCCGCAGCTCCGCCACCGCTCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GGTGGCGGAGCTGCGGCTTTGCTCCTCCCGTGCGGCTaGGGATGGTGGGGGAGCCGCTGGTTTCCGACGAGG +
Preference number: 6 (lower is better)
Translates to: GGGAAALLLPCG*GWWGSRWFPTR
Trigger: CCTCGTCGGAAACCAGCGGCTCCCCCACCATCCCCAGCCGCACGGGAGGAGCAAAGCCGCAGCTCCGCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp GGCGGTCATCCCCGGGGCCATCCCGGCGCAGCAGGCTaGGGTCGTTCTGCACCAGCCAGTCGGCCACCTTGG +
Preference number: 6 (lower is better)
Translates to: GGHPRGHPGAAG*GRSAPASRPPW
Trigger: CCAAGGTGGCCGACTGGCTGGTGCAGAACGACCCAAGCCTGCTGCGCCGGGATGGCCCCGGGGATGACCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp CCGGGGCCATCCCGGCGCAGCAGGCTTGGGTCGTTCTaGACCAGCCAGTCGGCCACCTTGGTTTCGGCCGAG +
Preference number: 6 (lower is better)
Translates to: PGPSRRSRLGSF*TSQSATLVSAE
Trigger: CTCGGCCGAAACCAAGGTGGCCGACTGGCTGGTGCAGAACGACCCAAGCCTGCTGCGCCGGGATGGCCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp CCACCTTGGTTTCGGCCGAGACCGTCTCCACAGGGGTaGTCTCCTTGCTGGGAGCCCGCCGCTGGCGCAGGG +
Preference number: 6 (lower is better)
Translates to: PPWFRPRPSPQG*SPCWEPAAGAG
Trigger: CCCTGCGCCAGCGGCGGGCTCCCAGCAAGGAGACCACCCCTGTGGAGACGGTCTCGGCCGAAACCAAGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GCGGTCATCCCCGGGGCCATCCCGGCGCAGCAGGCTTaGGTCGTTCTGCACCAGCCAGTCGGCCACCTTGGT +
Preference number: 6 (lower is better)
Translates to: AVIPGAIPAQQA*VVLHQPVGHLG
Trigger: ACCAAGGTGGCCGACTGGCTGGTGCAGAACGACCCAAGCCTGCTGCGCCGGGATGGCCCCGGGGATGACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp TGGTGCTGTGGCGGTCATCCCCGGGGCCATCCCGGCGCAGCAGGCTaGGGTCGTTCTGCACCAGCCAGTCGGCCACCTTGGTTTCGGCCG +
Preference number: 6 (lower is better)
Translates to: WCCGGHPRGHPGAAG*GRSAPASRPPWFRP
Trigger: CGGCCGAAACCAAGGTGGCCGACTGGCTGGTGCAGAACGACCCAAGCCTGCTGCGCCGGGATGGCCCCGGGGATGACCGCCACAGCACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp GGTCAGTGCCTGCTGCACCTTCTGAGCGGTGGCGGAGCTGCGGCTTaGCTCCTCCCGTGCGGCTGGGGATGGTGGGGGAGCCGCTGGTTT +
Preference number: 6 (lower is better)
Translates to: GQCLLHLLSGGGAAA*LLPCGWGWWGSRWF
Trigger: AAACCAGCGGCTCCCCCACCATCCCCAGCCGCACGGGAGGAGCAAAGCCGCAGCTCCGCCACCGCTCAGAAGGTGCAGCAGGCACTGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 72 bp TTGTGGCTGGGGAACTGTCCCGCATGCACTGGGCCATaGAGTCCTGGGCCAGGCGGGAGCGGCGCCCCACAC +
Preference number: 6 (lower is better)
Translates to: LWLGNCPACTGP*SPGPGGSGAPH
Trigger: GTGTGGGGCGCCGCTCCCGCCTGGCCCAGGACTTCATGGCCCAGTGCATGCGGGACAGTTCCCCAGCCACAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp GGTGAGCGCCGACCCCTGACCCATGCTAGATCCTCCTaGCGCTCTGTGCCTGGTTCTGGGCCTCGGCCGCCA +
Preference number: 6 (lower is better)
Translates to: GERRPLTHARSS*RSVPGSGPRPP
Trigger: TGGCGGCCGAGGCCCAGAACCAGGCACAGAGCGGCAGGAGGATCTAGCATGGGTCAGGGGTCGGCGCTCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GCAGGTCTTGTGGCTGGGGAACTGTCCCGCATGCACTaGGCCATGAAGTCCTGGGCCAGGCGGGAGCGGCGC +
Preference number: 6 (lower is better)
Translates to: AGLVAGELSRMH*AMKSWARRERR
Trigger: GCGCCGCTCCCGCCTGGCCCAGGACTTCATGGCCCAGTGCATGCGGGACAGTTCCCCAGCCACAAGACCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GCTGCGGCTTTGCTCCTCCCGTGCGGCTGGGGATGGTaGGGGAGCCGCTGGTTTCCGACGAGGTCCTTGTCG +
Preference number: 6 (lower is better)
Translates to: AAALLLPCGWGW*GSRWFPTRSLS
Trigger: CGACAAGGACCTCGTCGGAAACCAGCGGCTCCCCCACCATCCCCAGCCGCACGGGAGGAGCAAAGCCGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GGAGCTGCGGCTTTGCTCCTCCCGTGCGGCTGGGGATaGTGGGGGAGCCGCTGGTTTCCGACGAGGTCCTTG +
Preference number: 6 (lower is better)
Translates to: GAAALLLPCGWG*WGSRWFPTRSL
Trigger: CAAGGACCTCGTCGGAAACCAGCGGCTCCCCCACCATCCCCAGCCGCACGGGAGGAGCAAAGCCGCAGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp TTTCGGCCGAGACCGTCTCCACAGGGGTGGTCTCCTTaGTGGGAGCCCGCCGCTGGCGCAGGGAGAACTTGG +
Preference number: 6 (lower is better)
Translates to: FRPRPSPQGWSP*WEPAAGAGRTW
Trigger: CCAAGTTCTCCCTGCGCCAGCGGCGGGCTCCCAGCAAGGAGACCACCCCTGTGGAGACGGTCTCGGCCGAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp TGGCCCTGGGCCATTCCGCCTGGCAGCTTCAAGGCCTaGGGGGCTGTCAGCCCTACCACTGGGCAACTGAGG +
Preference number: 6 (lower is better)
Translates to: WPWAIPPGSFKA*GAVSPTTGQLR
Trigger: CCTCAGTTGCCCAGTGGTAGGGCTGACAGCCCCGCAGGCCTTGAAGCTGCCAGGCGGAATGGCCCAGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp GGGCCTTGGGGTGGACAGGCTGTTAGAGCGGGTCAGTaGCTGCTGCACCTTCTGAGCGGTGGCGGAGCTGCG +
Preference number: 6 (lower is better)
Translates to: GPWGGQAVRAGQ*LLHLLSGGGAA
Trigger: CGCAGCTCCGCCACCGCTCAGAAGGTGCAGCAGGCACTGACCCGCTCTAACAGCCTGTCCACCCCAAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp GTTTCGGCCGAGACCGTCTCCACAGGGGTGGTCTCCTaGCTGGGAGCCCGCCGCTGGCGCAGGGAGAACTTG +
Preference number: 6 (lower is better)
Translates to: VSAETVSTGVVS*LGARRWRRENL
Trigger: CAAGTTCTCCCTGCGCCAGCGGCGGGCTCCCAGCAAGGAGACCACCCCTGTGGAGACGGTCTCGGCCGAAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp GGATGGTGGGGGAGCCGCTGGTTTCCGACGAGGTCCTaGTCGGCCTGCCAGGGTAGCCTCTGGGGTCTCGTG +
Preference number: 6 (lower is better)
Translates to: GWWGSRWFPTRS*SACQGSLWGLV
Trigger: CACGAGACCCCAGAGGCTACCCTGGCAGGCCGACAAGGACCTCGTCGGAAACCAGCGGCTCCCCCACCATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp CGGCGCAGCAGGCTTGGGTCGTTCTGCACCAGCCAGTCGGCCACCTaGGTTTCGGCCGAGACCGTCTCCACAGGGGTGGTCTCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: RRSRLGSFCTSQSAT*VSAETVSTGVVSLL
Trigger: CAGCAAGGAGACCACCCCTGTGGAGACGGTCTCGGCCGAAACCAAGGTGGCCGACTGGCTGGTGCAGAACGACCCAAGCCTGCTGCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp TTCGCACAGGCAGGGGCCCCTCAGGCTCTCCGGTTCTaGGCCCAGGACCGTCCTCTGGCAAACCAGCATCTG +
Preference number: 6 (lower is better)
Translates to: FAQAGAPQALRF*AQDRPLANQHL
Trigger: CAGATGCTGGTTTGCCAGAGGACGGTCCTGGGCGCAGAACCGGAGAGCCTGAGGGGCCCCTGCCTGTGCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp GCCACCTTGGTTTCGGCCGAGACCGTCTCCACAGGGGTGGTCTCCTaGCTGGGAGCCCGCCGCTGGCGCAGGGAGAACTTGGTGATATGG +
Preference number: 6 (lower is better)
Translates to: ATLVSAETVSTGVVS*LGARRWRRENLVIW
Trigger: CCATATCACCAAGTTCTCCCTGCGCCAGCGGCGGGCTCCCAGCAAGGAGACCACCCCTGTGGAGACGGTCTCGGCCGAAACCAAGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp CCAGGGACCCTCGAGACCCATGACCTCGCCGCATGGCTGCGCGCCTaGATGTGTCTCCAGGGCCCAAGTCTGCAGGTGTTGGGCGATGCT +
Preference number: 6 (lower is better)
Translates to: PGTLETHDLAAWLRA*MCLQGPSLQVLGDA
Trigger: AGCATCGCCCAACACCTGCAGACTTGGGCCCTGGAGACACATCAAGGCGCGCAGCCATGCGGCGAGGTCATGGGTCTCGAGGGTCCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 72 bp TCTTCCTCGGGCCAGTCCAGGGACCCTCGAGACCCATaGCCTCGCCGCATGGCTGCGCGCCTTGATGTGTCT +
Preference number: 6 (lower is better)
Translates to: SSSGQSRDPRDP*PRRMAARLDVS
Trigger: AGACACATCAAGGCGCGCAGCCATGCGGCGAGGTCATGGGTCTCGAGGGTCCCTGGACTGGCCCGAGGAAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp CCTCACCCCACCAGGAGGGCTGCCCATACAGGGGTGTaGGGTAAGCGACCGCCTCTGCTCCATGTCTTCGGT +
Preference number: 6 (lower is better)
Translates to: PHPTRRAAHTGV*GKRPPLLHVFG
Trigger: ACCGAAGACATGGAGCAGAGGCGGTCGCTTACCGCACACCCCTGTATGGGCAGCCCTCCTGGTGGGGTGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp TCGTGGGCTTACGGCTGGTGCTGTAGAGCTCAGCACTaGGACCGGAGAAGCCAGTACGGGCAGGGGCAGTCC +
Preference number: 6 (lower is better)
Translates to: SWAYGWCCRAQH*DRRSQYGQGQS
Trigger: GGACTGCCCCTGCCCGTACTGGCTTCTCCGGTCGCAGTGCTGAGCTCTACAGCACCAGCCGTAAGCCCACGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092279.7
CDS CCA 72 bp GGGAGCTGTGGTGGGACCCATACTCCTCCTCGGAGGTaGACGTGTAATCCGAACCCTGCTGCCGACGCCTCG +
Preference number: 6 (lower is better)
Translates to: GSCGGTHTPPRR*TCNPNPAADAS
Trigger: CGAGGCGTCGGCAGCAGGGTTCGGATTACACGTCCACCTCCGAGGAGGAGTATGGGTCCCACCACAGCTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS CCA 72 bp GGCTTGGGTCGTTCTGCACCAGCCAGTCGGCCACCTTaGTTTCGGCCGAGACCGTCTCCACAGGGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: GLGRSAPASRPP*FRPRPSPQGWS
Trigger: AGACCACCCCTGTGGAGACGGTCTCGGCCGAAACCAAGGTGGCCGACTGGCTGGTGCAGAACGACCCAAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp CAGCTTCAAGGCCTGCGGGGCTGTCAGCCCTACCACTaGGCAACTGAGGGAGCAGACGCCGAGTTCGCACAG +
Preference number: 6 (lower is better)
Translates to: QLQGLRGCQPYH*ATEGADAEFAQ
Trigger: CTGTGCGAACTCGGCGTCTGCTCCCTCAGTTGCCCAGTGGTAGGGCTGACAGCCCCGCAGGCCTTGAAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp CTCTCGGGCGCTGCCCGGGGTAGCACCCCCTGGGTCTaGTACTGTTGGTGGAGACAATGGGCTCTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: LSGAARGSTPWV*YCWWRQWALLL
Trigger: CAGAAGGAGAGCCCATTGTCTCCACCAACAGTACCAGACCCAGGGGGTGCTACCCCGGGCAGCGCCCGAGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp AGTCCAGGGACCCTCGAGACCCATGACCTCGCCGCATaGCTGCGCGCCTTGATGTGTCTCCAGGGCCCAAGT +
Preference number: 6 (lower is better)
Translates to: SPGTLETHDLAA*LRALMCLQGPS
Trigger: ACTTGGGCCCTGGAGACACATCAAGGCGCGCAGCCATGCGGCGAGGTCATGGGTCTCGAGGGTCCCTGGACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp AGGCTTGGGTCGTTCTGCACCAGCCAGTCGGCCACCTaGGTTTCGGCCGAGACCGTCTCCACAGGGGTGGTC +
Preference number: 6 (lower is better)
Translates to: RLGSFCTSQSAT*VSAETVSTGVV
Trigger: GACCACCCCTGTGGAGACGGTCTCGGCCGAAACCAAGGTGGCCGACTGGCTGGTGCAGAACGACCCAAGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp CTGGCCTCCGCTGAGGCTCCAGACACCGAAGCAGTCTaGGCCAAGGGGTCCTCCGAGTCGCTCTGTGTGCCA +
Preference number: 6 (lower is better)
Translates to: LASAEAPDTEAV*AKGSSESLCVP
Trigger: TGGCACACAGAGCGACTCGGAGGACCCCTTGGCCAAGACTGCTTCGGTGTCTGGAGCCTCAGCGGAGGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp CTGGGGAGCCATGCCTGGTGCTCGGGAGGCAAACTCTaGCAGCAAAGCCATCCGCTGGGCCATGCCCCCATC +
Preference number: 6 (lower is better)
Translates to: LGSHAWCSGGKL*QQSHPLGHAPI
Trigger: GATGGGGGCATGGCCCAGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCGAGCACCAGGCATGGCTCCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp TGCTTGTGGCCCTTCAGAGTTCGAGTGTGGACAGGAAGGTCGCTTTaGGTGCTGTGGCGGTCATCCCCGGGGCCATCCCGGCGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: CLWPFRVRVWTGRSL*VLWRSSPGPSRRSR
Trigger: CCTGCTGCGCCGGGATGGCCCCGGGGATGACCGCCACAGCACCAAAAGCGACCTTCCTGTCCACACTCGAACTCTGAAGGGCCACAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp ACACTGCCAAAGGAGCGGGTGGAGGCGCGGGGGACGGGAGAAGTATaGCCCAGTCGCTCCTCAGTCTTCTCTCGCTTGAGCGAGCTGGCC +
Preference number: 6 (lower is better)
Translates to: TLPKERVEARGTGEV*PSRSSVFSRLSELA
Trigger: GGCCAGCTCGCTCAAGCGAGAGAAGACTGAGGAGCGACTGGGCAATACTTCTCCCGTCCCCCGCGCCTCCACCCGCTCCTTTGGCAGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 72 bp CCGCTCTGTGCCTGGTTCTGGGCCTCGGCCGCCATCTaGCCCACTGGCATCACTGAGACTATCAGGGTCCAG +
Preference number: 6 (lower is better)
Translates to: PLCAWFWASAAI*PTGITETIRVQ
Trigger: CTGGACCCTGATAGTCTCAGTGATGCCAGTGGGTCAGATGGCGGCCGAGGCCCAGAACCAGGCACAGAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 72 bp TCGAGACCCATGACCTCGCCGCATGGCTGCGCGCCTTaGTGTGTCTCCAGGGCCCAAGTCTGCAGGTGTTGG +
Preference number: 6 (lower is better)
Translates to: SRPMTSPHGCAP*CVSRAQVCRCW
Trigger: CCAACACCTGCAGACTTGGGCCCTGGAGACACATCAAGGCGCGCAGCCATGCGGCGAGGTCATGGGTCTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp CAGCACGGGCCTCAGCTATCGTGGGCTTACGGCTGGTaGTGTAGAGCTCAGCACTGCGACCGGAGAAGCCAG +
Preference number: 6 (lower is better)
Translates to: QHGPQLSWAYGW*CRAQHCDRRSQ
Trigger: CTGGCTTCTCCGGTCGCAGTGCTGAGCTCTACAGCACCAGCCGTAAGCCCACGATAGCTGAGGCCCGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp TGGGGAGCCATGCCTGGTGCTCGGGAGGCAAACTCTTaGAGCAAAGCCATCCGCTGGGCCATGCCCCCATCA +
Preference number: 6 (lower is better)
Translates to: WGAMPGAREANS*SKAIRWAMPPS
Trigger: TGATGGGGGCATGGCCCAGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCGAGCACCAGGCATGGCTCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp TCGTGGGCTTACGGCTGGTGCTGTAGAGCTCAGCACTaGGACCGGAGAAGCCAGTACGGGCAGGGGCAGTCT +
Preference number: 6 (lower is better)
Translates to: SWAYGWCCRAQH*DRRSQYGQGQS
Trigger: AGACTGCCCCTGCCCGTACTGGCTTCTCCGGTCGCAGTGCTGAGCTCTACAGCACCAGCCGTAAGCCCACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp CAGCAGCACGGGCCTCAGCTATCGTGGGCTTACGGCTaGTGCTGTAGAGCTCAGCACTGCGACCGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: QQHGPQLSWAYG*CCRAQHCDRRS
Trigger: GCTTCTCCGGTCGCAGTGCTGAGCTCTACAGCACCAGCCGTAAGCCCACGATAGCTGAGGCCCGTGCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp TGGCCTCCGCTGAGGCTCCAGACACCGAAGCAGTCTTaGCCAAGGGGTCCTCCGAGTCGCTCTGTGTGCCAT +
Preference number: 6 (lower is better)
Translates to: WPPLRLQTPKQS*PRGPPSRSVCH
Trigger: ATGGCACACAGAGCGACTCGGAGGACCCCTTGGCCAAGACTGCTTCGGTGTCTGGAGCCTCAGCGGAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp ACTCTCTTGCCGGGCAAAGGTCAGAGTCTCCTTGGGTaGAGCTGGGTCAGGCTCTGGGGACCGACCACTGCG +
Preference number: 6 (lower is better)
Translates to: TLLPGKGQSLLG*SWVRLWGPTTA
Trigger: CGCAGTGGTCGGTCCCCAGAGCCTGACCCAGCTCCACCCAAGGAGACTCTGACCTTTGCCCGGCAAGAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GAGGCACGGGCTGCAGCCAAGTCTTGTAGGAGCGGGTaGCTAGAAATGTGGGGGAGCTTGCCAGGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: EARAAAKSCRSG*LEMWGSLPGAG
Trigger: CCCAGCACCTGGCAAGCTCCCCCACATTTCTAGCCACCCGCTCCTACAAGACTTGGCTGCAGCCCGTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GCTGCCCGGGGTAGCACCCCCTGGGTCTGGTACTGTTaGTGGAGACAATGGGCTCTCCTTCTGTGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: AARGSTPWVWYC*WRQWALLLWSW
Trigger: CCAGGACCACAGAAGGAGAGCCCATTGTCTCCACCAACAGTACCAGACCCAGGGGGTGCTACCCCGGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp CTGCTCCATCTGGGGAGCCATGCCTGGTGCTCGGGAGGCAAACTCTaGCAGCAAAGCCATCCGCTGGGCCATGCCCCCATCACTGGACTC +
Preference number: 6 (lower is better)
Translates to: LLHLGSHAWCSGGKL*QQSHPLGHAPITGL
Trigger: GAGTCCAGTGATGGGGGCATGGCCCAGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCGAGCACCAGGCATGGCTCCCCAGATGGAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp GGTGTGTGGTCGGGCAGTGCATCACCCCTCTTGGGCGCAGAGACCTaGACGCTCACCTGCAGCTGGCTGGTGTACTTCTCGTGCTTGAGC +
Preference number: 6 (lower is better)
Translates to: GVWSGSASPLLGAET*TLTCSWLVYFSCLS
Trigger: GCTCAAGCACGAGAAGTACACCAGCCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCAAGAGGGGTGATGCACTGCCCGACCACACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp GGGACGGGAGAAGTATTGCCCAGTCGCTCCTCAGTCTTCTCTCGCTaGAGCGAGCTGGCCCTCTGTGGTCCTGAGCTGCTGCCAGTGGCA +
Preference number: 6 (lower is better)
Translates to: GTGEVLPSRSSVFSR*SELALCGPELLPVA
Trigger: TGCCACTGGCAGCAGCTCAGGACCACAGAGGGCCAGCTCGCTCAAGCGAGAGAAGACTGAGGAGCGACTGGGCAATACTTCTCCCGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 72 bp CGGGCAGTGCATCACCCCTCTTGGGCGCAGAGACCTTaGCGCTCACCTGCAGCTGGCTGGTGTACTTCTCGT +
Preference number: 6 (lower is better)
Translates to: RAVHHPSWAQRP*RSPAAGWCTSR
Trigger: ACGAGAAGTACACCAGCCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCAAGAGGGGTGATGCACTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 72 bp CCTTCGTGGGGATCTCAAAGTAGCTGGGCTCACGTCTaGACGAGTAGTCTGGTGGCTCGGCGGGAGCACGGC +
Preference number: 6 (lower is better)
Translates to: PSWGSQSSWAHV*TSSLVARREHG
Trigger: GCCGTGCTCCCGCCGAGCCACCAGACTACTCGTTCAGACGTGAGCCCAGCTACTTTGAGATCCCCACGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp TCACCCCTCTTGGGCGCAGAGACCTTGACGCTCACCTaGAGCTGGCTGGTGTACTTCTCGTGCTTGAGCGCC +
Preference number: 6 (lower is better)
Translates to: SPLLGAETLTLT*SWLVYFSCLSA
Trigger: GGCGCTCAAGCACGAGAAGTACACCAGCCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCAAGAGGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp GAGGCTCTGCTGCTCCATCTGGGGAGCCATGCCTGGTaGTCGGGAGGCAAACTCTTGCAGCAAAGCCATCCG +
Preference number: 6 (lower is better)
Translates to: EALLLHLGSHAW*SGGKLLQQSHP
Trigger: CGGATGGCTTTGCTGCAAGAGTTTGCCTCCCGAGCACCAGGCATGGCTCCCCAGATGGAGCAGCAGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp CTCTTGGGCGCAGAGACCTTGACGCTCACCTGCAGCTaGCTGGTGTACTTCTCGTGCTTGAGCGCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: LLGAETLTLTCS*LVYFSCLSASS
Trigger: CGAGGAGGCGCTCAAGCACGAGAAGTACACCAGCCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp AAAGTAGCTGGGCTCACGTCTGAACGAGTAGTCTGGTaGCTCGGCGGGAGCACGGCAGCTGTCCAGCTCACC +
Preference number: 6 (lower is better)
Translates to: KVAGLTSERVVW*LGGSTAAVQLT
Trigger: GGTGAGCTGGACAGCTGCCGTGCTCCCGCCGAGCCACCAGACTACTCGTTCAGACGTGAGCCCAGCTACTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp CTCAAAGTAGCTGGGCTCACGTCTGAACGAGTAGTCTaGTGGCTCGGCGGGAGCACGGCAGCTGTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LKVAGLTSERVV*WLGGSTAAVQL
Trigger: GAGCTGGACAGCTGCCGTGCTCCCGCCGAGCCACCAGACTACTCGTTCAGACGTGAGCCCAGCTACTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp CAGCCTTCTTGGCAGCAGCACGGGCCTCAGCTATCGTaGGCTTACGGCTGGTGCTGTAGAGCTCAGCACTGC +
Preference number: 6 (lower is better)
Translates to: QPSWQQHGPQLS*AYGWCCRAQHC
Trigger: GCAGTGCTGAGCTCTACAGCACCAGCCGTAAGCCCACGATAGCTGAGGCCCGTGCTGCTGCCAAGAAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp ACGTGTAATCCGAACCCTGCTGCCGACGCCTCGTGTTaGAAGAATATCTGGCACTGCCCGGGCGAGCCCTGC +
Preference number: 6 (lower is better)
Translates to: TCNPNPAADASC*KNIWHCPGEPC
Trigger: GCAGGGCTCGCCCGGGCAGTGCCAGATATTCTTCCAACACGAGGCGTCGGCAGCAGGGTTCGGATTACACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS CCA 72 bp GGAGAACCTGGGACCAAGAGGCTCTGCTGCTCCATCTaGGGAGCCATGCCTGGTGCTCGGGAGGCAAACTCT +
Preference number: 6 (lower is better)
Translates to: GEPGTKRLCCSI*GAMPGAREANS
Trigger: AGAGTTTGCCTCCCGAGCACCAGGCATGGCTCCCCAGATGGAGCAGCAGAGCCTCTTGGTCCCAGGTTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GGTCAGAGTCTCCTTGGGTGGAGCTGGGTCAGGCTCTaGGGACCGACCACTGCGCAACTGGATCACCATCCT +
Preference number: 6 (lower is better)
Translates to: GQSLLGWSWVRL*GPTTAQLDHHP
Trigger: AGGATGGTGATCCAGTTGCGCAGTGGTCGGTCCCCAGAGCCTGACCCAGCTCCACCCAAGGAGACTCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp CGGGTGGCTAGAAATGTGGGGGAGCTTGCCAGGTGCTaGGGGGCCGCTGGTTGGCTCCTTAGTGAAACTCTC +
Preference number: 6 (lower is better)
Translates to: RVARNVGELARC*GAAGWLLSETL
Trigger: GAGAGTTTCACTAAGGAGCCAACCAGCGGCCCCCCAGCACCTGGCAAGCTCCCCCACATTTCTAGCCACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GCCCGGGGTAGCACCCCCTGGGTCTGGTACTGTTGGTaGAGACAATGGGCTCTCCTTCTGTGGTCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: ARGSTPWVWYCW*RQWALLLWSWS
Trigger: ACTCCAGGACCACAGAAGGAGAGCCCATTGTCTCCACCAACAGTACCAGACCCAGGGGGTGCTACCCCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GTAGCCTCTGGGGTCTCGTGGTTAGAACTGGGCAAGTaGGCAAGGCCAGAACCTCGCTCTTCCTCGGGCCAG +
Preference number: 6 (lower is better)
Translates to: VASGVSWLELGK*ARPEPRSSSGQ
Trigger: CTGGCCCGAGGAAGAGCGAGGTTCTGGCCTTGCCCACTTGCCCAGTTCTAACCACGAGACCCCAGAGGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp TCGGGCAGTGCATCACCCCTCTTGGGCGCAGAGACCTaGACGCTCACCTGCAGCTGGCTGGTGTACTTCTCG +
Preference number: 6 (lower is better)
Translates to: SGSASPLLGAET*TLTCSWLVYFS
Trigger: CGAGAAGTACACCAGCCAGCTGCAGGTGAGCGTCAAGGTCTCTGCGCCCAAGAGGGGTGATGCACTGCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp GGGCTGGCAGCAAGGTATCCACCGAGGCAGGTGAAGTaGAGCTCTGAGCTGCTGGCCGGGCTTTCCCAAGTC +
Preference number: 6 (lower is better)
Translates to: GLAARYPPRQVK*SSELLAGLSQV
Trigger: GACTTGGGAAAGCCCGGCCAGCAGCTCAGAGCTCAACTTCACCTGCCTCGGTGGATACCTTGCTGCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp TGGCCTCTGGTATACGCTGTACCAGCTCTTCCCGGGCTGAGATGGTaGAGGCAGGGGTGTTGGGCACATTCCCGAGAGATGGGCTGCGAG +
Preference number: 6 (lower is better)
Translates to: WPLVYAVPALPGLRW*RQGCWAHSREMGCE
Trigger: CTCGCAGCCCATCTCTCGGGAATGTGCCCAACACCCCTGCCTCAACCATCTCAGCCCGGGAAGAGCTGGTACAGCGTATACCAGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp GGCTCCTTAGTGAAACTCTCTTGCCGGGCAAAGGTCAGAGTCTCCTaGGGTGGAGCTGGGTCAGGCTCTGGGGACCGACCACTGCGCAAC +
Preference number: 6 (lower is better)
Translates to: GSLVKLSCRAKVRVS*GGAGSGSGDRPLRN
Trigger: GTTGCGCAGTGGTCGGTCCCCAGAGCCTGACCCAGCTCCACCCAAGGAGACTCTGACCTTTGCCCGGCAAGAGAGTTTCACTAAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 72 bp AGCAAGGTATCCACCGAGGCAGGTGAAGTTGAGCTCTaGGCTGCTGGCCGGGCTTTCCCAAGTCCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: SKVSTEAGEVEL*AAGRAFPSPGW
Trigger: CCAGCCAGGACTTGGGAAAGCCCGGCCAGCAGCTCAGAGCTCAACTTCACCTGCCTCGGTGGATACCTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 72 bp CTTGCTGGTTGTGCAGCAGCTCTTGAGGGTCCCTTTTaGTCTGCCTCTGCAGCCGCACCTGCTCCCCACTGG +
Preference number: 6 (lower is better)
Translates to: LAGCAAALEGPF*SASAAAPAPHW
Trigger: CCAGTGGGGAGCAGGTGCGGCTGCAGAGGCAGATCAAAAGGGACCCTCAAGAGCTGCTGCACAACCAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 72 bp TCTGCGCCCAGGACCGTCCTCTGGCAAACCAGCATCTaGGTAGCTGTCAGCCAGGCTAGCCCATCGGGAAAC +
Preference number: 6 (lower is better)
Translates to: SAPRTVLWQTSI*VAVSQASPSGN
Trigger: GTTTCCCGATGGGCTAGCCTGGCTGACAGCTACTCAGATGCTGGTTTGCCAGAGGACGGTCCTGGGCGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp CTCAGGGGCAGCACGATTTGCTGGTTCAGGGTTGGCTaGGGTCCCTCGTTCACCATCCACAGCCTCAGTGTC +
Preference number: 6 (lower is better)
Translates to: LRGSTICWFRVG*GPSFTIHSLSV
Trigger: GACACTGAGGCTGTGGATGGTGAACGAGGGACCGCAGCCAACCCTGAACCAGCAAATCGTGCTGCCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp TGTGGGCACTTCCTGGGTAGGCACCTCAGGGAGCCTTaGAGGCTGCGGGGTTTCCTTCGTGGGGATCTCAAA +
Preference number: 6 (lower is better)
Translates to: CGHFLGRHLREP*RLRGFLRGDLK
Trigger: TTTGAGATCCCCACGAAGGAAACCCCGCAGCCTCCAAGGCTCCCTGAGGTGCCTACCCAGGAAGTGCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GTTGAGGCATGGGAGCGTGTGTGTTTAGGGGAGCTGTaGTGGGACCCATACTCCTCCTCGGAGGTGGACGTG +
Preference number: 6 (lower is better)
Translates to: VEAWERVCLGEL*WDPYSSSEVDV
Trigger: CACGTCCACCTCCGAGGAGGAGTATGGGTCCCACCACAGCTCCCCTAAACACACACGCTCCCATGCCTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000222711.2
CDS TCA 72 bp CTCACCATTTTGCTGTGCCAGGTCCTTGGGACGCTCTaGGTAGGGCTCCTCCTGGTGCCGGTCTTCAGATGG +
Preference number: 6 (lower is better)
Translates to: LTILLCQVLGTL*VGLLLVPVFRW
Trigger: CCATCTGAAGACCGGCACCAGGAGGAGCCCTACTCAGAGCGTCCCAAGGACCTGGCACAGCAAAATGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 72 bp TCACCTTGCCTGGACTGCAGTCATCAAACTCAATGGTaGAGGAGGCGTGGCTCTGCACCACAGGGGCCGTCC +
Preference number: 6 (lower is better)
Translates to: SPCLDCSHQTQW*RRRGSAPQGPS
Trigger: GGACGGCCCCTGTGGTGCAGAGCCACGCCTCCTTCACCATTGAGTTTGATGACTGCAGTCCAGGCAAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp CTGCCCATACAGGGGTGTGCGGTAAGCGACCGCCTCTaGTCCATGTCTTCGGTCACCTTTCTCTGGTCTAGG +
Preference number: 6 (lower is better)
Translates to: LPIQGCAVSDRL*SMSSVTFLWSR
Trigger: CCTAGACCAGAGAAAGGTGACCGAAGACATGGAGCAGAGGCGGTCGCTTACCGCACACCCCTGTATGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp CAGTCTTGGCCAAGGGGTCCTCCGAGTCGCTCTGTGTaGCATCCTCATGCTTGTGGCCCTTCAGAGTTCGAG +
Preference number: 6 (lower is better)
Translates to: QSWPRGPPSRSV*HPHACGPSEFE
Trigger: CTCGAACTCTGAAGGGCCACAAGCATGAGGATGGCACACAGAGCGACTCGGAGGACCCCTTGGCCAAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GGACTGCAGTCATCAAACTCAATGGTGAAGGAGGCGTaGCTCTGCACCACAGGGGCCGTCCCACCAACACCT +
Preference number: 6 (lower is better)
Translates to: GLQSSNSMVKEA*LCTTGAVPPTP
Trigger: AGGTGTTGGTGGGACGGCCCCTGTGGTGCAGAGCCACGCCTCCTTCACCATTGAGTTTGATGACTGCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp TCCACAGGGGTGGTCTCCTTGCTGGGAGCCCGCCGCTaGCGCAGGGAGAACTTGGTGATATGGTCTTTGATT +
Preference number: 6 (lower is better)
Translates to: STGVVSLLGARR*RRENLVIWSLI
Trigger: AATCAAAGACCATATCACCAAGTTCTCCCTGCGCCAGCGGCGGGCTCCCAGCAAGGAGACCACCCCTGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp CAAGAGGCTCTGCTGCTCCATCTGGGGAGCCATGCCTaGTGCTCGGGAGGCAAACTCTTGCAGCAAAGCCAT +
Preference number: 6 (lower is better)
Translates to: QEALLLHLGSHA*CSGGKLLQQSH
Trigger: ATGGCTTTGCTGCAAGAGTTTGCCTCCCGAGCACCAGGCATGGCTCCCCAGATGGAGCAGCAGAGCCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp CAGTTTCTTGGCCTGCTCAGGGGCAGCACGATTTGCTaGTTCAGGGTTGGCTGCGGTCCCTCGTTCACCATC +
Preference number: 6 (lower is better)
Translates to: QFLGLLRGSTIC*FRVGCGPSFTI
Trigger: GATGGTGAACGAGGGACCGCAGCCAACCCTGAACCAGCAAATCGTGCTGCCCCTGAGCAGGCCAAGAAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GGGGCATGGCCAGGATGTCCAAGCGTGTCAGTTTCTTaGCCTGCTCAGGGGCAGCACGATTTGCTGGTTCAG +
Preference number: 6 (lower is better)
Translates to: GAWPGCPSVSVS*PAQGQHDLLVQ
Trigger: CTGAACCAGCAAATCGTGCTGCCCCTGAGCAGGCCAAGAAACTGACACGCTTGGACATCCTGGCCATGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp GGGTCCTCCGAGTCGCTCTGTGTGCCATCCTCATGCTaGTGGCCCTTCAGAGTTCGAGTGTGGACAGGAAGG +
Preference number: 6 (lower is better)
Translates to: GSSESLCVPSSC*WPFRVRVWTGR
Trigger: CCTTCCTGTCCACACTCGAACTCTGAAGGGCCACAAGCATGAGGATGGCACACAGAGCGACTCGGAGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp AGCAAAGCCATCCGCTGGGCCATGCCCCCATCACTGGACTCATCTTaGTCACCTCTGATGACAGGGCGGAAGGTAGCAGAGGACACCCTG +
Preference number: 6 (lower is better)
Translates to: SKAIRWAMPPSLDSS*SPLMTGRKVAEDTL
Trigger: CAGGGTGTCCTCTGCTACCTTCCGCCCTGTCATCAGAGGTGACAAAGATGAGTCCAGTGATGGGGGCATGGCCCAGCGGATGGCTTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp AGTTTCTTGGCCTGCTCAGGGGCAGCACGATTTGCTGGTTCAGGGTaGGCTGCGGTCCCTCGTTCACCATCCACAGCCTCAGTGTCTGAG +
Preference number: 6 (lower is better)
Translates to: SFLACSGAARFAGSG*AAVPRSPSTASVSE
Trigger: CTCAGACACTGAGGCTGTGGATGGTGAACGAGGGACCGCAGCCAACCCTGAACCAGCAAATCGTGCTGCCCCTGAGCAGGCCAAGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp TGTCCAAGCGTGTCAGTTTCTTGGCCTGCTCAGGGGCAGCACGATTaGCTGGTTCAGGGTTGGCTGCGGTCCCTCGTTCACCATCCACAG +
Preference number: 6 (lower is better)
Translates to: CPSVSVSWPAQGQHD*LVQGWLRSLVHHPQ
Trigger: CTGTGGATGGTGAACGAGGGACCGCAGCCAACCCTGAACCAGCAAATCGTGCTGCCCCTGAGCAGGCCAAGAAACTGACACGCTTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp TTGGCCAAGGGGTCCTCCGAGTCGCTCTGTGTGCCATCCTCATGCTaGTGGCCCTTCAGAGTTCGAGTGTGGACAGGAAGGTCGCTTTTG +
Preference number: 6 (lower is better)
Translates to: LAKGSSESLCVPSSC*WPFRVRVWTGRSLL
Trigger: CAAAAGCGACCTTCCTGTCCACACTCGAACTCTGAAGGGCCACAAGCATGAGGATGGCACACAGAGCGACTCGGAGGACCCCTTGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 72 bp TCCATGTCTTCGGTCACCTTTCTCTGGTCTAGGCTGTaGGGACTCGCAGTAGGGTGTGTGGTCGGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: SMSSVTFLWSRL*GLAVGCVVGQC
Trigger: GCACTGCCCGACCACACACCCTACTGCGAGTCCTCACAGCCTAGACCAGAGAAAGGTGACCGAAGACATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp TCCTCCGAGTCGCTCTGTGTGCCATCCTCATGCTTGTaGCCCTTCAGAGTTCGAGTGTGGACAGGAAGGTCG +
Preference number: 6 (lower is better)
Translates to: SSESLCVPSSCL*PFRVRVWTGRS
Trigger: CGACCTTCCTGTCCACACTCGAACTCTGAAGGGCCACAAGCATGAGGATGGCACACAGAGCGACTCGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GCTCGGGAGGCAAACTCTTGCAGCAAAGCCATCCGCTaGGCCATGCCCCCATCACTGGACTCATCTTTGTCA +
Preference number: 6 (lower is better)
Translates to: AREANSCSKAIR*AMPPSLDSSLS
Trigger: TGACAAAGATGAGTCCAGTGATGGGGGCATGGCCCAGCGGATGGCTTTGCTGCAAGAGTTTGCCTCCCGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GGAGACAATGGGCTCTCCTTCTGTGGTCCTGGAGTCTaGGGTGTTGTTGGGCTGGGACCATTTTTGCCGCTG +
Preference number: 6 (lower is better)
Translates to: GDNGLSFCGPGV*GVVGLGPFLPL
Trigger: CAGCGGCAAAAATGGTCCCAGCCCAACAACACCCCAGACTCCAGGACCACAGAAGGAGAGCCCATTGTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp GTATACGCTGTACCAGCTCTTCCCGGGCTGAGATGGTaGAGGCAGGGGTGTTGGGCACATTCCCGAGAGATG +
Preference number: 6 (lower is better)
Translates to: VYAVPALPGLRW*RQGCWAHSREM
Trigger: CATCTCTCGGGAATGTGCCCAACACCCCTGCCTCAACCATCTCAGCCCGGGAAGAGCTGGTACAGCGTATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp ATCCGCTGGGCCATGCCCCCATCACTGGACTCATCTTaGTCACCTCTGATGACAGGGCGGAAGGTAGCAGAG +
Preference number: 6 (lower is better)
Translates to: IRWAMPPSLDSS*SPLMTGRKVAE
Trigger: CTCTGCTACCTTCCGCCCTGTCATCAGAGGTGACAAAGATGAGTCCAGTGATGGGGGCATGGCCCAGCGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 72 bp TCGATGACAAAGGCTTGCTGGTTGTGCAGCAGCTCTTaGGGGTCCCTTTTGATCTGCCTCTGCAGCCGCACC +
Preference number: 6 (lower is better)
Translates to: SMTKACWLCSSS*GSLLICLCSRT
Trigger: GGTGCGGCTGCAGAGGCAGATCAAAAGGGACCCTCAAGAGCTGCTGCACAACCAGCAAGCCTTTGTCATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp ATGGCCAGGATGTCCAAGCGTGTCAGTTTCTTGGCCTaGTCAGGGGCAGCACGATTTGCTGGTTCAGGGTTG +
Preference number: 6 (lower is better)
Translates to: MARMSKRVSFLA*SGAARFAGSGL
Trigger: CAACCCTGAACCAGCAAATCGTGCTGCCCCTGAGCAGGCCAAGAAACTGACACGCTTGGACATCCTGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp CTGGCCTCTAAGTCCTCCCAGGCCCGGCCTGTATTCTaGAAGAGGACCTTCATCTTCTCAGCAAGATGCTCC +
Preference number: 6 (lower is better)
Translates to: LASKSSQARPVF*KRTFIFSARCS
Trigger: GGAGCATCTTGCTGAGAAGATGAAGGTCCTCTTCCAGAATACAGGCCGGGCCTGGGAGGACTTAGAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp CCATCCTCATGCTTGTGGCCCTTCAGAGTTCGAGTGTaGACAGGAAGGTCGCTTTTGGTGCTGTGGCGGTCA +
Preference number: 6 (lower is better)
Translates to: PSSCLWPFRVRV*TGRSLLVLWRS
Trigger: TGACCGCCACAGCACCAAAAGCGACCTTCCTGTCCACACTCGAACTCTGAAGGGCCACAAGCATGAGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp CTCGATGACAAAGGCTTGCTGGTTGTGCAGCAGCTCTaGAGGGTCCCTTTTGATCTGCCTCTGCAGCCGCAC +
Preference number: 6 (lower is better)
Translates to: LDDKGLLVVQQL*RVPFDLPLQPH
Trigger: GTGCGGCTGCAGAGGCAGATCAAAAGGGACCCTCAAGAGCTGCTGCACAACCAGCAAGCCTTTGTCATCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp GTCGATCATCCTCCGAGCCTCCTCCACTTCTTGGTCTaGAGCCTCTGTCTCAATGGTGTACGTGCCTGCGTC +
Preference number: 6 (lower is better)
Translates to: VDHPPSLLHFLV*SLCLNGVRACV
Trigger: GACGCAGGCACGTACACCATTGAGACAGAGGCTCAAGACCAAGAAGTGGAGGAGGCTCGGAGGATGATCGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp CACTCCAAAAACCTGGTCGATCATCCTCCGAGCCTCCTCCACTTCTaGGTCTTGAGCCTCTGTCTCAATGGTGTACGTGCCTGCGTCGCT +
Preference number: 6 (lower is better)
Translates to: HSKNLVDHPPSLLHF*VLSLCLNGVRACVA
Trigger: AGCGACGCAGGCACGTACACCATTGAGACAGAGGCTCAAGACCAAGAAGTGGAGGAGGCTCGGAGGATGATCGACCAGGTTTTTGGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp AACCTGGTCGATCATCCTCCGAGCCTCCTCCACTTCTaGGTCTTGAGCCTCTGTCTCAATGGTGTACGTGCC +
Preference number: 6 (lower is better)
Translates to: NLVDHPPSLLHF*VLSLCLNGVRA
Trigger: GGCACGTACACCATTGAGACAGAGGCTCAAGACCAAGAAGTGGAGGAGGCTCGGAGGATGATCGACCAGGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp CTGGGAGCCCGCCGCTGGCGCAGGGAGAACTTGGTGATATGGTCTTaGATTTTCACCTTGCCTGGACTGCAGTCATCAAACTCAATGGTG +
Preference number: 6 (lower is better)
Translates to: LGARRWRRENLVIWS*IFTLPGLQSSNSMV
Trigger: CACCATTGAGTTTGATGACTGCAGTCCAGGCAAGGTGAAAATCAAAGACCATATCACCAAGTTCTCCCTGCGCCAGCGGCGGGCTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp TACTTCTCGTGCTTGAGCGCCTCCTCGGGAACACGGTaGTGCACACGCTCTAACACGTACATGTTGGAATCA +
Preference number: 6 (lower is better)
Translates to: YFSCLSASSGTR*CTRSNTYMLES
Trigger: TGATTCCAACATGTACGTGTTAGAGCGTGTGCAGCACCGTGTTCCCGAGGAGGCGCTCAAGCACGAGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp AGATCACCTCCTCACGGTTCCGAGGCCTCGTCTTGTTaGTCAGAGCATCGTCTCGGCTGTCATTCATGTTCT +
Preference number: 6 (lower is better)
Translates to: RSPPHGSEASSC*SEHRLGCHSCS
Trigger: AGAACATGAATGACAGCCGAGACGATGCTCTGACCAACAAGACGAGGCCTCGGAACCGTGAGGAGGTGATCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp AAGATCACCTCCTCACGGTTCCGAGGCCTCGTCTTGTaGGTCAGAGCATCGTCTCGGCTGTCATTCATGTTC +
Preference number: 6 (lower is better)
Translates to: KITSSRFRGLVL*VRASSRLSFMF
Trigger: GAACATGAATGACAGCCGAGACGATGCTCTGACCAACAAGACGAGGCCTCGGAACCGTGAGGAGGTGATCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp TCAAAGATCACCTCCTCACGGTTCCGAGGCCTCGTCTaGTTGGTCAGAGCATCGTCTCGGCTGTCATTCATG +
Preference number: 6 (lower is better)
Translates to: SKITSSRFRGLV*LVRASSRLSFM
Trigger: CATGAATGACAGCCGAGACGATGCTCTGACCAACAAGACGAGGCCTCGGAACCGTGAGGAGGTGATCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp AAAAACCTGGTCGATCATCCTCCGAGCCTCCTCCACTTCTTGGTCTaGAGCCTCTGTCTCAATGGTGTACGTGCCTGCGTCGCTAAGACT +
Preference number: 6 (lower is better)
Translates to: KNLVDHPPSLLHFLV*SLCLNGVRACVAKT
Trigger: AGTCTTAGCGACGCAGGCACGTACACCATTGAGACAGAGGCTCAAGACCAAGAAGTGGAGGAGGCTCGGAGGATGATCGACCAGGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 72 bp GTTTCTTACGGGGTGTGTCCCCATCGAAGAACTCGATaGCAAAGGCTTGCTGGTTGTGCAGCAGCTCTTGAG +
Preference number: 6 (lower is better)
Translates to: VSYGVCPHRRTR*QRLAGCAAALE
Trigger: CTCAAGAGCTGCTGCACAACCAGCAAGCCTTTGTCATCGAGTTCTTCGATGGGGACACACCCCGTAAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS GCA 72 bp TTGGTCTTGAGCCTCTGTCTCAATGGTGTACGTGCCTaGGTCGCTAAGACTGTCATCCTCCTCCTGTTTACG +
Preference number: 6 (lower is better)
Translates to: LVLSLCLNGVRA*VAKTVILLLFT
Trigger: CGTAAACAGGAGGAGGATGACAGTCTTAGCGACGCAGGCACGTACACCATTGAGACAGAGGCTCAAGACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp CGCCGCTGGCGCAGGGAGAACTTGGTGATATGGTCTTaGATTTTCACCTTGCCTGGACTGCAGTCATCAAAC +
Preference number: 6 (lower is better)
Translates to: RRWRRENLVIWS*IFTLPGLQSSN
Trigger: GTTTGATGACTGCAGTCCAGGCAAGGTGAAAATCAAAGACCATATCACCAAGTTCTCCCTGCGCCAGCGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp CGCTGGCGCAGGGAGAACTTGGTGATATGGTCTTTGATTTTCACCTaGCCTGGACTGCAGTCATCAAACTCAATGGTGAAGGAGGCGTGG +
Preference number: 6 (lower is better)
Translates to: RWRRENLVIWSLIFT*PGLQSSNSMVKEAW
Trigger: CCACGCCTCCTTCACCATTGAGTTTGATGACTGCAGTCCAGGCAAGGTGAAAATCAAAGACCATATCACCAAGTTCTCCCTGCGCCAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp AGATTATCAAAGATCACCTCCTCACGGTTCCGAGGCCTCGTCTTGTaGGTCAGAGCATCGTCTCGGCTGTCATTCATGTTCTGGTCCAAG +
Preference number: 6 (lower is better)
Translates to: RLSKITSSRFRGLVL*VRASSRLSFMFWSK
Trigger: CTTGGACCAGAACATGAATGACAGCCGAGACGATGCTCTGACCAACAAGACGAGGCCTCGGAACCGTGAGGAGGTGATCTTTGATAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp ATCAGATTATCAAAGATCACCTCCTCACGGTTCCGAGGCCTCGTCTaGTTGGTCAGAGCATCGTCTCGGCTGTCATTCATGTTCTGGTCC +
Preference number: 6 (lower is better)
Translates to: IRLSKITSSRFRGLV*LVRASSRLSFMFWS
Trigger: GGACCAGAACATGAATGACAGCCGAGACGATGCTCTGACCAACAAGACGAGGCCTCGGAACCGTGAGGAGGTGATCTTTGATAATCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp TTTCCCATCAGTAGGTCGAGGTTCAAGCTGGGGTCCACGATGGCATaGATGACTTCTAACTGCTTCTGTACGCGTCGAAGTTCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: FPISRSRFKLGSTMA*MTSNCFCTRRSSFR
Trigger: CCTGAAGGAACTTCGACGCGTACAGAAGCAGTTAGAAGTCATCAATGCCATCGTGGACCCCAGCTTGAACCTCGACCTACTGATGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS TCA 72 bp TCGTCTCGGCTGTCATTCATGTTCTGGTCCAAGTTGTaGGAGTTCATAGAGCCAGGCGGCACTTTCTGGAAG +
Preference number: 6 (lower is better)
Translates to: SSRLSFMFWSKL*EFIEPGGTFWK
Trigger: CTTCCAGAAAGTGCCGCCTGGCTCTATGAACTCTCACAACTTGGACCAGAACATGAATGACAGCCGAGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 90 bp ATTTCCTTGTTGGATGTCTTCAGGATGGGTACTTCATTCTCAGAGTaGATTCTGGCCTCTAAGTCCTCCCAGGCCCGGCCTGTATTCTGG +
Preference number: 6 (lower is better)
Translates to: ISLLDVFRMGTSFSE*ILASKSSQARPVFW
Trigger: CCAGAATACAGGCCGGGCCTGGGAGGACTTAGAGGCCAGAATCAACTCTGAGAATGAAGTACCCATCCTGAAGACATCCAACAAGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp TCATCTTCTCAGCAAGATGCTCCGTGTTTTCACGAATaGCATGTGACAGCTGGGACACCGGGTTTAGCATCA +
Preference number: 6 (lower is better)
Translates to: SSSQQDAPCFHE*HVTAGTPGLAS
Trigger: TGATGCTAAACCCGGTGTCCCAGCTGTCACATGCCATTCGTGAAAACACGGAGCATCTTGCTGAGAAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp GACGTCATTGAGCTTCAGTGTGATGTACTTCTGGTCTaGGATGCGCACATCATTCACAAATGTCCCATTGAG +
Preference number: 6 (lower is better)
Translates to: DVIELQCDVLLV*DAHIIHKCPIE
Trigger: CTCAATGGGACATTTGTGAATGATGTGCGCATCCCAGACCAGAAGTACATCACACTGAAGCTCAATGACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CCA 72 bp AGATGCTCCGTGTTTTCACGAATGGCATGTGACAGCTaGGACACCGGGTTTAGCATCAGATTATCAAAGATC +
Preference number: 6 (lower is better)
Translates to: RCSVFSRMACDS*DTGFSIRLSKI
Trigger: GATCTTTGATAATCTGATGCTAAACCCGGTGTCCCAGCTGTCACATGCCATTCGTGAAAACACGGAGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092279.7
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2
CDS CAA 72 bp AGGGAGAACTTGGTGATATGGTCTTTGATTTTCACCTaGCCTGGACTGCAGTCATCAAACTCAATGGTGAAG +
Preference number: 6 (lower is better)
Translates to: RENLVIWSLIFT*PGLQSSNSMVK
Trigger: CTTCACCATTGAGTTTGATGACTGCAGTCCAGGCAAGGTGAAAATCAAAGACCATATCACCAAGTTCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000101018.11
ENSMUST00000179041.8
ENSMUST00000220627.2
ENSMUST00000222711.2