RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP162 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056919

Ensembl transcript IDs: ENSMUST00000093802.6

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATGAGACTTGTGGGAAGTGGGTGCGGCCGCATGGGCCAAGATGGTaGCCAGGCCCATTGCCAGGCCCCGTGAAACCCACATTTACTGCC +
Preference number: 1 (lower is better)
Translates to: DETCGKWVRPHGPRW*PGPLPGPVKPTFTA
Trigger: GGCAGTAAATGTGGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGCCCATGCGGCCGCACCCACTTCCCACAAGTCTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CCA 90 bp GAGGTGTGGGAAGTGGGTGCGGCCGCATGGGCCAAGATGGCACCCTaGCCCATTGCCAGGCCCCGTGAAACCCACATGTTTATTACTGCC +
Preference number: 1 (lower is better)
Translates to: EVWEVGAAAWAKMAP*PIARPRETHMFITA
Trigger: GGCAGTAATAAACATGTGGGTTTCACGGGGCCTGGCAATGGGCCAGGGTGCCATCTTGGCCCATGCGGCCGCACCCACTTCCCACACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 90 bp GCAGCTCTCGTCGTGCTGTCTGGAGCTCAGGCGTCTTCACATCACTaGTTCTTTCTTCCACACAGATCCAGGAGCACCCAGTGCAGGCAC +
Preference number: 1 (lower is better)
Translates to: AALVVLSGAQASSHH*FFLPHRSRSTQCRH
Trigger: GTGCCTGCACTGGGTGCTCCTGGATCTGTGTGGAAGAAAGAAGCAGTGATGTGAAGACGCCTGAGCTCCAGACAGCACGACGAGAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 90 bp CCCCTCTTGGTGTCTGTGTCATTCTTGTCTCTGCGGGTTGGAGACTaGGGCAGAGACTGTCCTCAGCACGAGGCTCTCATCCATCTATCT +
Preference number: 1 (lower is better)
Translates to: PLLVSVSFLSLRVGD*GRDCPQHEALIHLS
Trigger: AGATAGATGGATGAGAGCCTCGTGCTGAGGACAGTCTCTGCCGCAGTCTCCAACCCGCAGAGACAAGAATGACACAGACACCAAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CCA 90 bp CTCTCCTGTTGGCTCATGGCAGTTTATTCTGATATGTTACTCTGGTaGTGGTCACGCATGGCTGTGTGGTGCCTGTCCCAACAGCAGCAG +
Preference number: 1 (lower is better)
Translates to: LSCWLMAVYSDMLLW*WSRMAVWCLSQQQQ
Trigger: CTGCTGCTGTTGGGACAGGCACCACACAGCCATGCGTGACCACCACCAGAGTAACATATCAGAATAAACTGCCATGAGCCAACAGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR TCA 90 bp GACCGACCTGAGCTCGTTCCTGGAGCGTGTGTGATTTTGATTGGATaGGGTGGTGTGGAGCGAGATGAGGTCAGTTGCTGCTACTGTATA +
Preference number: 1 (lower is better)
Translates to: DRPELVPGACVILIG*GGVERDEVSCCYCI
Trigger: TATACAGTAGCAGCAACTGACCTCATCTCGCTCCACACCACCTCATCCAATCAAAATCACACACGCTCCAGGAACGAGCTCAGGTCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 90 bp TCACATCACTGCTTCTTTCTTCCACACAGATCCAGGAGCACCCAGTaGAGGCACCAGGTGCATCTCCACACACAGCTTCATTTCCAGAGA +
Preference number: 1 (lower is better)
Translates to: SHHCFFLPHRSRSTQ*RHQVHLHTQLHFQR
Trigger: TCTCTGGAAATGAAGCTGTGTGTGGAGATGCACCTGGTGCCTGCACTGGGTGCTCCTGGATCTGTGTGGAAGAAAGAAGCAGTGATGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CCA 90 bp TCCTGTTGGCTCATGGCAGTTTATTCTGATATGTTACTCTGGTGGTaGTCACGCATGGCTGTGTGGTGCCTGTCCCAACAGCAGCAGGTT +
Preference number: 1 (lower is better)
Translates to: SCWLMAVYSDMLLWW*SRMAVWCLSQQQQV
Trigger: AACCTGCTGCTGTTGGGACAGGCACCACACAGCCATGCGTGACCACCACCAGAGTAACATATCAGAATAAACTGCCATGAGCCAACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR TCA 90 bp GGCCCCGTGAAACCCACATTTACTGCCTTGCTCAAACATTCACAGTaGAACTGCATGTGTAAGCTGCCTGCCAAGTTAGATTATTCCTCG +
Preference number: 1 (lower is better)
Translates to: GPVKPTFTALLKHSQ*NCMCKLPAKLDYSS
Trigger: CGAGGAATAATCTAACTTGGCAGGCAGCTTACACATGCAGTTTCACTGTGAATGTTTGAGCAAGGCAGTAAATGTGGGTTTCACGGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR TCA 90 bp TGGAGTGTGTGTGATTCTGATTGGATGAGGTGGTGTGGAGCAAGATaGGGTCAGTTGCTGCTACTGTATAAATATAGCCCTTGTCCTAAG +
Preference number: 1 (lower is better)
Translates to: WSVCDSDWMRWCGAR*GQLLLLYKYSPCPK
Trigger: CTTAGGACAAGGGCTATATTTATACAGTAGCAGCAACTGACCTCATCTTGCTCCACACCACCTCATCCAATCAGAATCACACACACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR TCA 90 bp GGCACCAGGTGCATCTCCACACACAGCTTCATTTCCAGAGAGACATaGAAACAAACTGGCAGCAGCTTTCATTTACAGAAATCACACACA +
Preference number: 1 (lower is better)
Translates to: GTRCISTHSFISRET*KQTGSSFHLQKSHT
Trigger: TGTGTGTGATTTCTGTAAATGAAAGCTGCTGCCAGTTTGTTTTCATGTCTCTCTGGAAATGAAGCTGTGTGTGGAGATGCACCTGGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 90 bp CAGCAACAGACATGTCAAACTGTGCCACTGTCACTTTCTATCAGGTaGAAAAGGCCCCGGAGAACTTGTTTCCCTGAATGGAAGTTAAAA +
Preference number: 1 (lower is better)
Translates to: QQQTCQTVPLSLSIR*KRPRRTCFPEWKLK
Trigger: TTTTAACTTCCATTCAGGGAAACAAGTTCTCCGGGGCCTTTTGCACCTGATAGAAAGTGACAGTGGCACAGTTTGACATGTCTGTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR TCA 90 bp CTGGGAGTGAGCCCTTTCACAGTAACCTTGCTAGTCACAGTCTTCTaGCGTCATGGAACCTGCTCATTTCTCAAATGTTTAATGGTTTTC +
Preference number: 1 (lower is better)
Translates to: LGVSPFTVTLLVTVF*RHGTCSFLKCLMVF
Trigger: GAAAACCATTAAACATTTGAGAAATGAGCAGGTTCCATGACGTCAGAAGACTGTGACTAGCAAGGTTACTGTGAAAGGGCTCACTCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR TCA 90 bp CGTGAAACCCACATGTTTATTACTGCCTTGCCTGGACATTCACAGTaGGACTGCATGTGTAAGCTGCCTGCCAAGTTAGATTATTCTTGT +
Preference number: 1 (lower is better)
Translates to: RETHMFITALPGHSQ*DCMCKLPAKLDYSC
Trigger: ACAAGAATAATCTAACTTGGCAGGCAGCTTACACATGCAGTCTCACTGTGAATGTCCAGGCAAGGCAGTAATAAACATGTGGGTTTCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 90 bp AGGAATGTGTGTAACCTCTGTTCAGTATCAGAATTTTTCCAGAGCTaGAAATCTGTCACATGCAATTGGTGCGATGCTGCTAGGATCTCG +
Preference number: 1 (lower is better)
Translates to: RNVCNLCSVSEFFQS*KSVTCNWCDAARIS
Trigger: CGAGATCCTAGCAGCATCGCACCAATTGCATGTGACAGATTTGCAGCTCTGGAAAAATTCTGATACTGAACAGAGGTTACACACATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 90 bp CCGTTCCTTAGGAAACATTCTACTTTGCAAGTATTATTTCAGGACTaGATTTGCTGGCACGGGCAGTTGGAATGTCATCTAACACAAGAT +
Preference number: 1 (lower is better)
Translates to: PFLRKHSTLQVLFQD*ICWHGQLECHLTQD
Trigger: ATCTTGTGTTAGATGACATTCCAACTGCCCGTGCCAGCAAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTTTCCTAAGGAACGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR GCA 90 bp GGTGCGGCCGCATGGGCCAAGATGGCACCCTGGCCCATTGCCAGGCCCCGTGAACGCATGGCTGTGTGGTaGCTGTCCCAACAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: GAAAWAKMAPWPIARPRERMAVW*LSQQQQ
Trigger: CTGCTGCTGTTGGGACAGGCACCACACAGCCATGCG...TTCACGGGGCCTGGCAATGGGCCAGGGTGCCATCTTGGCCCATGCGGCCGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR CCA 90 bp CGGCCGCATGGGCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCCATGTTACTCTGGTGGTaGTCACGCATGGCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: RPHGPRWCPGPLPGPVKPMLLWW*SRMAVW
Trigger: CCACACAGCCATGCGTGACCACCACCAGAGTAACAT...GGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGCCCATGCGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR GCA 90 bp CGGCCGCATGGGCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCCAGCTGCTGCGGAAGCTaGGTAAACTTGTCTTGGTGT +
Preference number: 2 (lower is better)
Translates to: RPHGPRWCPGPLPGPVKPSCCGS*VNLSWC
Trigger: ACACCAAGACAAGTTTACGCAGCTTCCGCAGCAGCT...GGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGCCCATGCGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR GCA 90 bp GCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCCACATTTACTGCCTGCGGGTTGGAGACTaGGGCAGAGACTGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: AKMVPRPIARPRETHIYCLRVGD*GRDCPQ
Trigger: CTGAGGACAGTCTCTGCCGCAGTCTCCAACCCGCAG...GCAGTAAATGTGGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR TCA 90 bp GATAAACGAGCCTTAGTGCAGGCTATGGCAGCCTTGGAAGCTGGAACATCCCCCTCTACAAAGTGTGGCTaGGGGTGTGCGCGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: DKRALVQAMAALEAGTSPSTKCG*GCARSS
Trigger: AGAGGAGCGCGCACACCCTCAGCCACACTTTGTAGA...GGGGGATGTTCCAGCTTCCAAGGCTGCCATAGCCTGCACTAAGGCTCGTTTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CAA 90 bp AAGAAGCTGAAGCTGTGTGAACCCCTCTTGGTGTCTGTGTCATTCTaGTCTCTGCGGGTTGGAGACTGCGGCAGAGACTGTCCTCAGCAC +
Preference number: 2 (lower is better)
Translates to: KKLKLCEPLLVSVSF*SLRVGDCGRDCPQH
Trigger: GTGCTGAGGACAGTCTCTGCCGCAGTCTCCAACCCGCAGAGACAAGAATGACACAGACACCAAGAGGGGTTCACACAGCTTCAGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR TCA 90 bp GCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCCACATTTACTGCGGGAGTAGTTTATGTTaGAGGAAATCAACCCCAAGC +
Preference number: 2 (lower is better)
Translates to: AKMVPRPIARPRETHIYCGSSLC*RKSTPS
Trigger: GCTTGGGGTTGATTTCCTTCAACATAAACTACTCCC...GCAGTAAATGTGGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR CCA 90 bp GGCAAGTGGTGGCCTGTACGGGGAAATTTTGGTAAGCTGTGGCAAGTGGTGGCCGATATGTTACTCTGGTaGTGGTCACGCATGGCTGTG +
Preference number: 2 (lower is better)
Translates to: GKWWPVRGNFGKLWQVVADMLLW*WSRMAV
Trigger: CACAGCCATGCGTGACCACCACCAGAGTAACATATC...GGCCACCACTTGCCACAGCTTACCAAAATTTCCCCGTACAGGCCACCACTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR GCA 90 bp CGTGCTGTCTGGAGCTCAGGCGTCTTCACATCACTGCTTCTTTCTTCCACACAGTGTCATTCTTGTCTCTaGGGGTTGGAGACTGCGGCA +
Preference number: 2 (lower is better)
Translates to: RAVWSSGVFTSLLLSSTQCHSCL*GLETAA
Trigger: TGCCGCAGTCTCCAACCCGCAGAGACAAGAATGACA...CTGTGTGGAAGAAAGAAGCAGTGATGTGAAGACGCCTGAGCTCCAGACAGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR CCA 90 bp TTGGCTTCAGTTGGTCATGAGAAATCCTATGATATACCCCAGAATTACCCGGACGGTGGTGGTCACGCATaGCTGTGTGGTGCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: LASVGHEKSYDIPQNYPDGGGHA*LCGACP
Trigger: GGGACAGGCACCACACAGCCATGCGTGACCACCACC...GTCCGGGTAATTCTGGGGTATATCATAGGATTTCTCATGACCAACTGAAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR GCA 90 bp GCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCCACATTTACTGCTTAATATTTGCTTCCTaGATTACTCATATGCCAGGA +
Preference number: 2 (lower is better)
Translates to: AKMVPRPIARPRETHIYCLIFAS*ITHMPG
Trigger: TCCTGGCATATGAGTAATGCAGGAAGCAAATATTAA...GCAGTAAATGTGGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR GCA 90 bp CTGCTGACAGCTGATGAGACTTGTGGGAAGTGGGTGCGGCCGCATGGGCCAAGAGATGAGGTCAGTTGCTaGTACTGTATAAATATATCT +
Preference number: 2 (lower is better)
Translates to: LLTADETCGKWVRPHGPRDEVSC*YCINIS
Trigger: AGATATATTTATACAGTAGCAGCAACTGACCTCATC...TCTTGGCCCATGCGGCCGCACCCACTTCCCACAAGTCTCATCAGCTGTCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR GCA 90 bp GAATGGAAGTTAAAACTGTCATTTAAACTGAGGACACTACACTCTGCTGACAGCCATGGGCCAAGATGGTaGCCAGGCCCATTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: EWKLKLSFKLRTLHSADSHGPRW*PGPLPG
Trigger: GCCTGGCAATGGGCCTGGGCACCATCTTGGCCCATG...GCTGTCAGCAGAGTGTAGTGTCCTCAGTTTAAATGACAGTTTTAACTTCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR GCA 90 bp AACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTGCTGGCACGGGCAGTGTGCAGCTCTCGTCGTaGTGTCTGGAGCTCAGGCGT +
Preference number: 2 (lower is better)
Translates to: NILLCKYYFRTAFAGTGSVQLSS*CLELRR
Trigger: ACGCCTGAGCTCCAGACAGCACGACGAGAGCTGCAC...ACTGCCCGTGCCAGCAAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR CCA 90 bp GGAACAGTTAATATTTGCTTCCTGCATTACTCATATGCCAGGAATGTGTGTAACGCCAAGATGGCACCCTaGCCCATTGCCAGGCCCCGT +
Preference number: 2 (lower is better)
Translates to: GTVNICFLHYSYARNVCNAKMAP*PIARPR
Trigger: ACGGGGCCTGGCAATGGGCCAGGGTGCCATCTTGGC...GTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR GCA 90 bp GGCAAGTGGTGGCCTGTACGGGGAAATTTTGGTAAGCTGTGGCAAGTGGTGGCCGAATTTTTCCAGAGCTaGAAATCTGTCACATGCAAT +
Preference number: 2 (lower is better)
Translates to: GKWWPVRGNFGKLWQVVAEFFQS*KSVTCN
Trigger: ATTGCATGTGACAGATTTGCAGCTCTGGAAAAATTC...GGCCACCACTTGCCACAGCTTACCAAAATTTCCCCGTACAGGCCACCACTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR CCA 90 bp TCCGGATCTGTCAGCCTATCTGTGACTGATCTGAGCTCGTGCCTGGAGTGTGTGTCTCCTGTTGGCTCATaGCAGTTTATTCTGATATGT +
Preference number: 2 (lower is better)
Translates to: SGSVSLSVTDLSSCLECVSPVGS*QFILIC
Trigger: ACATATCAGAATAAACTGCCATGAGCCAACAGGAGA...CACACACTCCAGGCACGAGCTCAGATCAGTCACAGATAGGCTGACAGATCCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR GCA 90 bp CGTGCTGTCTGGAGCTCAGGCGTCTTCACATCACTGCTTCTTTCTTCCACACAGGATGAGGTCAGTTGCTaGTACTGTATAAATATAGCC +
Preference number: 2 (lower is better)
Translates to: RAVWSSGVFTSLLLSSTQDEVSC*YCINIA
Trigger: GGCTATATTTATACAGTAGCAGCAACTGACCTCATC...CTGTGTGGAAGAAAGAAGCAGTGATGTGAAGACGCCTGAGCTCCAGACAGCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR CCA 90 bp GTAAGGATGTGGCACGGATGGGGGCAACCTAAGACAGATGCTGATCTCAGAGCTTATGTTCTCTCCTGTTaGCTCATGGCAGTTTATTCT +
Preference number: 2 (lower is better)
Translates to: VRMWHGWGQPKTDADLRAYVLSC*LMAVYS
Trigger: AGAATAAACTGCCATGAGCCAACAGGAGAGAACATA...AGCTCTGAGATCAGCATCTGTCTTAGGTTGCCCCCATCCGTGCCACATCCTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR TCA 90 bp ACTAGACCTGCCCTCCAGCAACAGACATGTCAAACTGTGCCACTGTCACTTTCTCATCTATCTGTTTCATaGGAAAGAGCTGATTTCCGG +
Preference number: 2 (lower is better)
Translates to: TRPALQQQTCQTVPLSLSHLSVS*ERADFR
Trigger: CCGGAAATCAGCTCTTTCTCATGAAACAGATAGATG...AGAAAGTGACAGTGGCACAGTTTGACATGTCTGTTGCTGGAGGGCAGGTCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR GCA 90 bp TGCATTACTCATATGCCAGGAATGTGTGTAACCTCTGTTCAGTATCAGAATTTTGTGTGGCTGAGGGTGTaGGCGCTCCTCTTCCACTGT +
Preference number: 2 (lower is better)
Translates to: CITHMPGMCVTSVQYQNFVWLRV*ALLFHC
Trigger: ACAGTGGAAGAGGAGCGCGCACACCCTCAGCCACAC...AAAATTCTGATACTGAACAGAGGTTACACACATTCCTGGCATATGAGTAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR TCA 90 bp GATGGATCTGAAGGTGGTGTGGGAGTAGTTTATGTTGAAGGAAATCAACCCCAAGTGATTCTGATTGGATaGGGTGGTGTGGAGCAAGAT +
Preference number: 2 (lower is better)
Translates to: DGSEGGVGVVYVEGNQPQVILIG*GGVEQD
Trigger: ATCTTGCTCCACACCACCTCATCCAATCAGAATCAC...TTGGGGTTGATTTCCTTCAACATAAACTACTCCCACACCACCTTCAGATCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR TCA 90 bp TTGGCTTCAGTTGGTCATGAGAAATCCTATGATATACCCCAGAATTACCCGGACTTTGGGTCCTCCTGCTaGCTTTTGTGTATGGAGGAA +
Preference number: 2 (lower is better)
Translates to: LASVGHEKSYDIPQNYPDFGSSC*LLCMEE
Trigger: TTCCTCCATACACAAAAGTCAGCAGGAGGACCCAAA...GTCCGGGTAATTCTGGGGTATATCATAGGATTTCTCATGACCAACTGAAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR GCA 90 bp CGTGCTGTCTGGAGCTCAGGCGTCTTCACATCACTGCTTCTTTCTTCCACACAGCAAGATGAGGTCAGTTaGTGCTACTGTATAAATATA +
Preference number: 2 (lower is better)
Translates to: RAVWSSGVFTSLLLSSTQQDEVS*CYCINI
Trigger: TATATTTATACAGTAGCAGCAACTGACCTCATCTTG...CTGTGTGGAAGAAAGAAGCAGTGATGTGAAGACGCCTGAGCTCCAGACAGCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR GCA 90 bp GCTGCAAATCTGTCACATGCAATTGGTGCGATGCTGCTAGGATCTCGACACAAATGTTTATTACTGCCTTaGCTGGACATTCACAGTGAG +
Preference number: 2 (lower is better)
Translates to: AANLSHAIGAMLLGSRHKCLLLP*LDIHSE
Trigger: CTCACTGTGAATGTCCAGGCAAGGCAGTAATAAACA...TTTGTGTCGAGATCCTAGCAGCATCGCACCAATTGCATGTGACAGATTTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR CCA 90 bp ATGAACAACACCCGTGTGGAGATTACAACTGCAAAGCAATGGCTGGAGATCATCTGTGTGAACCCCTCTTaGTGTCTGTGTCATTCTTGT +
Preference number: 2 (lower is better)
Translates to: MNNTRVEITTAKQWLEIICVNPS*CLCHSC
Trigger: ACAAGAATGACACAGACACCAAGAGGGGTTCACACA...GATGATCTCCAGCCATTGCTTTGCAGTTGTAATCTCCACACGGGTGTTGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR TCA 90 bp ACAGTTAATATTTGCTTCCTGCATTACTCATATGCCAGGAATGTGTGTAACCTCTGGTGTGGAGCAAGATaGGGTCAGTTGCTGCTACTG +
Preference number: 2 (lower is better)
Translates to: TVNICFLHYSYARNVCNLWCGAR*GQLLLL
Trigger: CAGTAGCAGCAACTGACCTCATCTTGCTCCACACCA...GAGGTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CAA 90 bp GATGTAAAACAGATTGAGGTACTTGCCTCCACTAATTGGCTTCAGTaGGTCATGAGAAATCCTATGATATACCCCAGAATTACCCGGACT +
Preference number: 2 (lower is better)
Translates to: DVKQIEVLASTNWLQ*VMRNPMIYPRITRT
Trigger: AGTCCGGGTAATTCTGGGGTATATCATAGGATTTCTCATGACCAACTGAAGCCAATTAGTGGAGGCAAGTACCTCAATCTGTTTTACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR CCA 90 bp TTCAGTATCAGAATTTTTCCAGAGCTGCAAATCTGTCACATGCAATTGGTGCGATATGGAGGAATGCTTTaGTGGATGGCACATATGCGA +
Preference number: 2 (lower is better)
Translates to: FSIRIFPELQICHMQLVRYGGML*WMAHMR
Trigger: TCGCATATGTGCCATCCACCAAAGCATTCCTCCATA...TCGCACCAATTGCATGTGACAGATTTGCAGCTCTGGAAAAATTCTGATACTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR CCA 90 bp TTTGGTAAACAACCTGATGTAAAACAGATTGAGGTACTTGCCTCCACTAATTGGACAACTGCAAAGCAATaGCTGGAGATCATCCAGGGA +
Preference number: 2 (lower is better)
Translates to: FGKQPDVKQIEVLASTNWTTAKQ*LEIIQG
Trigger: TCCCTGGATGATCTCCAGCCATTGCTTTGCAGTTGT...CCAATTAGTGGAGGCAAGTACCTCAATCTGTTTTACATCAGGTTGTTTACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CAA 90 bp ATCAACCCCAAGCTCATGTATTTCCCTATCAACCTGCACAAGCTGTaGTTGGAACAGTTAATATTTGCTTCCTGCATTACTCATATGCCA +
Preference number: 2 (lower is better)
Translates to: INPKLMYFPINLHKL*LEQLIFASCITHMP
Trigger: TGGCATATGAGTAATGCAGGAAGCAAATATTAACTGTTCCAACAACAGCTTGTGCAGGTTGATAGGGAAATACATGAGCTTGGGGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR CCA 90 bp ACCCGTTCCTTAGGAAACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTTTGGATGAGGTGGTGTaGAGCAAGATGAGGTCAGTT +
Preference number: 2 (lower is better)
Translates to: TRSLGNILLCKYYFRTAFLDEVV*SKMRSV
Trigger: AACTGACCTCATCTTGCTCCACACCACCTCATCCAA...AAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTTTCCTAAGGAACGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR TCA 90 bp GGAACAGTTAATATTTGCTTCCTGCATTACTCATATGCCAGGAATGTGTGTAACCATGGCAGTTTATTCTaGTATGTTACTCTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: GTVNICFLHYSYARNVCNHGSLF*YVTLVV
Trigger: CACCACCAGAGTAACATATCAGAATAAACTGCCATG...GTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR CCA 90 bp GAATGGAAGTTAAAACTGTCATTTAAACTGAGGACACTACACTCTGCTGACAGCGGAATTTCAGCAACATaGATTCAACTGTGTCTAAAA +
Preference number: 2 (lower is better)
Translates to: EWKLKLSFKLRTLHSADSGISAT*IQLCLK
Trigger: TTTTAGACACAGTTGAATCCATGTTGCTGAAATTCC...GCTGTCAGCAGAGTGTAGTGTCCTCAGTTTAAATGACAGTTTTAACTTCCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CCA 72 bp AGGTGTGGGAAGTGGGTGCGGCCGCATGGGCCAAGATaGCACCCTGGCCCATTGCCAGGCCCCGTGAAACCC +
Preference number: 3 (lower is better)
Translates to: RCGKWVRPHGPR*HPGPLPGPVKP
Trigger: GGGTTTCACGGGGCCTGGCAATGGGCCAGGGTGCCATCTTGGCCCATGCGGCCGCACCCACTTCCCACACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 72 bp TGTGGGAAGTGGGTGCGGCCGCATGGGCCAAGATGGTaGCCAGGCCCATTGCCAGGCCCCGTGAAACCCACA +
Preference number: 3 (lower is better)
Translates to: CGKWVRPHGPRW*PGPLPGPVKPT
Trigger: TGTGGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGCCCATGCGGCCGCACCCACTTCCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CCA 72 bp AAAAAGGGGGAGGTGTGGGAAGTGGGTGCGGCCGCATaGGCCAAGATGGCACCCTGGCCCATTGCCAGGCCC +
Preference number: 3 (lower is better)
Translates to: KKGEVWEVGAAA*AKMAPWPIARP
Trigger: GGGCCTGGCAATGGGCCAGGGTGCCATCTTGGCCCATGCGGCCGCACCCACTTCCCACACCTCCCCCTTTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CCA 72 bp ACTTGTGGGAAGTGGGTGCGGCCGCATGGGCCAAGATaGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCC +
Preference number: 3 (lower is better)
Translates to: TCGKWVRPHGPR*CPGPLPGPVKP
Trigger: GGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGCCCATGCGGCCGCACCCACTTCCCACAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CCA 72 bp GAAGTGGGTGCGGCCGCATGGGCCAAGATGGCACCCTaGCCCATTGCCAGGCCCCGTGAAACCCACATGTTT +
Preference number: 3 (lower is better)
Translates to: EVGAAAWAKMAP*PIARPRETHMF
Trigger: AAACATGTGGGTTTCACGGGGCCTGGCAATGGGCCAGGGTGCCATCTTGGCCCATGCGGCCGCACCCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR TCA 72 bp GGCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTaGAACCCACATTTACTGCCTTGCTCAAACATTCAC +
Preference number: 3 (lower is better)
Translates to: GQDGAQAHCQAP*NPHLLPCSNIH
Trigger: GTGAATGTTTGAGCAAGGCAGTAAATGTGGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 72 bp GTGTCTGTGTCATTCTTGTCTCTGCGGGTTGGAGACTaGGGCAGAGACTGTCCTCAGCACGAGGCTCTCATC +
Preference number: 3 (lower is better)
Translates to: VSVSFLSLRVGD*GRDCPQHEALI
Trigger: GATGAGAGCCTCGTGCTGAGGACAGTCTCTGCCGCAGTCTCCAACCCGCAGAGACAAGAATGACACAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 72 bp CACACAGATCCAGGAGCACCCAGTGCAGGCACCAGGTaGATCTCCACACACAGCTTCATTTCCAGAGAGACA +
Preference number: 3 (lower is better)
Translates to: HTDPGAPSAGTR*ISTHSFISRET
Trigger: TGTCTCTCTGGAAATGAAGCTGTGTGTGGAGATGCACCTGGTGCCTGCACTGGGTGCTCCTGGATCTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 72 bp GTCGTGCTGTCTGGAGCTCAGGCGTCTTCACATCACTaGTTCTTTCTTCCACACAGATCCAGGAGCACCCAG +
Preference number: 3 (lower is better)
Translates to: VVLSGAQASSHH*FFLPHRSRSTQ
Trigger: CTGGGTGCTCCTGGATCTGTGTGGAAGAAAGAAGCAGTGATGTGAAGACGCCTGAGCTCCAGACAGCACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR TCA 72 bp GAGCTCGTTCCTGGAGCGTGTGTGATTTTGATTGGATaGGGTGGTGTGGAGCGAGATGAGGTCAGTTGCTGC +
Preference number: 3 (lower is better)
Translates to: ELVPGACVILIG*GGVERDEVSCC
Trigger: GCAGCAACTGACCTCATCTCGCTCCACACCACCTCATCCAATCAAAATCACACACGCTCCAGGAACGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CCA 72 bp GTCCTCCTGCTGACTTTTGTGTATGGAGGAATGCTTTaGTGGATGGCACATATGCGAAGGCGGCACAGGGCT +
Preference number: 3 (lower is better)
Translates to: VLLLTFVYGGML*WMAHMRRRHRA
Trigger: AGCCCTGTGCCGCCTTCGCATATGTGCCATCCACCAAAGCATTCCTCCATACACAAAAGTCAGCAGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CCA 72 bp CTCCTGCTGACTTTTGTGTATGGAGGAATGCTTTGGTaGATGGCACATATGCGAAGGCGGCACAGGGCTGAT +
Preference number: 3 (lower is better)
Translates to: LLLTFVYGGMLW*MAHMRRRHRAD
Trigger: ATCAGCCCTGTGCCGCCTTCGCATATGTGCCATCCACCAAAGCATTCCTCCATACACAAAAGTCAGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CCA 72 bp CTCATGGCAGTTTATTCTGATATGTTACTCTGGTGGTaGTCACGCATGGCTGTGTGGTGCCTGTCCCAACAG +
Preference number: 3 (lower is better)
Translates to: LMAVYSDMLLWW*SRMAVWCLSQQ
Trigger: CTGTTGGGACAGGCACCACACAGCCATGCGTGACCACCACCAGAGTAACATATCAGAATAAACTGCCATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CCA 72 bp TGGCTCATGGCAGTTTATTCTGATATGTTACTCTGGTaGTGGTCACGCATGGCTGTGTGGTGCCTGTCCCAA +
Preference number: 3 (lower is better)
Translates to: WLMAVYSDMLLW*WSRMAVWCLSQ
Trigger: TTGGGACAGGCACCACACAGCCATGCGTGACCACCACCAGAGTAACATATCAGAATAAACTGCCATGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 72 bp CAAAATAATTTAATCTACAAAGTGTGGCTGAGGGTGTaGGCGCTCCTCTTCCACTGTAGCCTGGGAGTGAGC +
Preference number: 3 (lower is better)
Translates to: QNNLIYKVWLRV*ALLFHCSLGVS
Trigger: GCTCACTCCCAGGCTACAGTGGAAGAGGAGCGCGCACACCCTCAGCCACACTTTGTAGATTAAATTATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CCA 72 bp GATGGCCTTTTGGGTCCTCCTGCTGACTTTTGTGTATaGAGGAATGCTTTGGTGGATGGCACATATGCGAAG +
Preference number: 3 (lower is better)
Translates to: DGLLGPPADFCV*RNALVDGTYAK
Trigger: CTTCGCATATGTGCCATCCACCAAAGCATTCCTCCATACACAAAAGTCAGCAGGAGGACCCAAAAGGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 72 bp ACATGTCAAACTGTGCCACTGTCACTTTCTATCAGGTaGAAAAGGCCCCGGAGAACTTGTTTCCCTGAATGG +
Preference number: 3 (lower is better)
Translates to: TCQTVPLSLSIR*KRPRRTCFPEW
Trigger: CCATTCAGGGAAACAAGTTCTCCGGGGCCTTTTGCACCTGATAGAAAGTGACAGTGGCACAGTTTGACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR CAA 90 bp ATGTGTAAGCTGCCTGCCAAGTTAGATTATTCTTGTGATCCGGATCTGTCAGCCCTGTGTGAACCCCTCTaGGTGTCTGTGTCATTCTTG +
Preference number: 3 (lower is better)
Translates to: MCKLPAKLDYSCDPDLSALCEPL*VSVSFL
Trigger: CAAGAATGACACAGACACCAAGAGGGGTTCACACAG...GGCTGACAGATCCGGATCACAAGAATAATCTAACTTGGCAGGCAGCTTACACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR CAA 90 bp CGTGCTGTCTGGAGCTCAGGCGTCTTCACATCACTGCTTCTTTCTTCCACACAGCTGCACAAGCTGTTGTaGGAACAGTTAATATTTGCT +
Preference number: 3 (lower is better)
Translates to: RAVWSSGVFTSLLLSSTQLHKLL*EQLIFA
Trigger: AGCAAATATTAACTGTTCCAACAACAGCTTGTGCAG...CTGTGTGGAAGAAAGAAGCAGTGATGTGAAGACGCCTGAGCTCCAGACAGCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR TCA 72 bp GTATGTTCTCTCCTGTTGGCTCATGGCAGTTTATTCTaGTATGTTACTCTGGTGGTGGTCACGCATGGCTGT +
Preference number: 3 (lower is better)
Translates to: VCSLLLAHGSLF*YVTLVVVTHGC
Trigger: ACAGCCATGCGTGACCACCACCAGAGTAACATATCAGAATAAACTGCCATGAGCCAACAGGAGAGAACATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR TCA 72 bp CCTCAGCACGAGGCTCTCATCCATCTATCTGTTTCATaGGAAAGAGCTGATTTCCGGTCTGACAGAAAATGC +
Preference number: 3 (lower is better)
Translates to: PQHEALIHLSVS*ERADFRSDRKC
Trigger: GCATTTTCTGTCAGACCGGAAATCAGCTCTTTCTCATGAAACAGATAGATGGATGAGAGCCTCGTGCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR CAA 90 bp ATGAACAACACCCGTGTGGAGATTACAACTGCAAAGCAATGGCTGGAGATCATCGTATGTTCTCTCCTGTaGGCTCATGGCAGTTTATTC +
Preference number: 3 (lower is better)
Translates to: MNNTRVEITTAKQWLEIIVCSLL*AHGSLF
Trigger: GAATAAACTGCCATGAGCCAACAGGAGAGAACATAC...GATGATCTCCAGCCATTGCTTTGCAGTTGTAATCTCCACACGGGTGTTGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 72 bp GACTTGCCCACCCGTTCCTTAGGAAACATTCTACTTTaGAAGTATTATTTCAGGACTGCATTTGCTGGCACG +
Preference number: 3 (lower is better)
Translates to: DLPTRSLGNILL*KYYFRTAFAGT
Trigger: CGTGCCAGCAAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTTTCCTAAGGAACGGGTGGGCAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 72 bp CGACACAAAGATGAAGGAATTGCGAGCATTAATTGTTaGCATGAACAACACCCGTGTGGAGATTACAACTGC +
Preference number: 3 (lower is better)
Translates to: RHKDEGIASINC*HEQHPCGDYNC
Trigger: GCAGTTGTAATCTCCACACGGGTGTTGTTCATGGCAACAATTAATGCTCGCAATTCCTTCATCTTTGTGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 72 bp GTATCAGAATTTTTCCAGAGCTGCAAATCTGTCACATaGAATTGGTGCGATGCTGCTAGGATCTCGACACAA +
Preference number: 3 (lower is better)
Translates to: VSEFFQSCKSVT*NWCDAARISTQ
Trigger: TTGTGTCGAGATCCTAGCAGCATCGCACCAATTGCATGTGACAGATTTGCAGCTCTGGAAAAATTCTGATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR TCA 72 bp AAACCCACATTTACTGCCTTGCTCAAACATTCACAGTaGAACTGCATGTGTAAGCTGCCTGCCAAGTTAGAT +
Preference number: 3 (lower is better)
Translates to: KPTFTALLKHSQ*NCMCKLPAKLD
Trigger: ATCTAACTTGGCAGGCAGCTTACACATGCAGTTTCACTGTGAATGTTTGAGCAAGGCAGTAAATGTGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 72 bp TGTAACCTCTGTTCAGTATCAGAATTTTTCCAGAGCTaGAAATCTGTCACATGCAATTGGTGCGATGCTGCT +
Preference number: 3 (lower is better)
Translates to: CNLCSVSEFFQS*KSVTCNWCDAA
Trigger: AGCAGCATCGCACCAATTGCATGTGACAGATTTGCAGCTCTGGAAAAATTCTGATACTGAACAGAGGTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR TCA 72 bp TGCATCTCCACACACAGCTTCATTTCCAGAGAGACATaGAAACAAACTGGCAGCAGCTTTCATTTACAGAAA +
Preference number: 3 (lower is better)
Translates to: CISTHSFISRET*KQTGSSFHLQK
Trigger: TTTCTGTAAATGAAAGCTGCTGCCAGTTTGTTTTCATGTCTCTCTGGAAATGAAGCTGTGTGTGGAGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 72 bp CAACCTGCACAAGCTGTTGTTGGAACAGTTAATATTTaGTTCCTGCATTACTCATATGCCAGGAATGTGTGT +
Preference number: 3 (lower is better)
Translates to: QPAQAVVGTVNI*FLHYSYARNVC
Trigger: ACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGTTCCAACAACAGCTTGTGCAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 72 bp AGGAAACATTCTACTTTGCAAGTATTATTTCAGGACTaGATTTGCTGGCACGGGCAGTTGGAATGTCATCTA +
Preference number: 3 (lower is better)
Translates to: RKHSTLQVLFQD*ICWHGQLECHL
Trigger: TAGATGACATTCCAACTGCCCGTGCCAGCAAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CCA 72 bp TCTACTTTGCAAGTATTATTTCAGGACTGCATTTGCTaGCACGGGCAGTTGGAATGTCATCTAACACAAGAT +
Preference number: 3 (lower is better)
Translates to: STLQVLFQDCIC*HGQLECHLTQD
Trigger: ATCTTGTGTTAGATGACATTCCAACTGCCCGTGCCAGCAAATGCAGTCCTGAAATAATACTTGCAAAGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR-3UTR CAA 90 bp AACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTGCTGGCACGGGCAGTAACCTGCACAAGCTGTaGTTGGAACAGTTAATATTT +
Preference number: 3 (lower is better)
Translates to: NILLCKYYFRTAFAGTGSNLHKL*LEQLIF
Trigger: AAATATTAACTGTTCCAACAACAGCTTGTGCAGGTT...ACTGCCCGTGCCAGCAAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR GCA 72 bp CACAAGCTGTTGTTGGAACAGTTAATATTTGCTTCCTaGATTACTCATATGCCAGGAATGTGTGTAACCTCT +
Preference number: 3 (lower is better)
Translates to: HKLLLEQLIFAS*ITHMPGMCVTS
Trigger: AGAGGTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGTTCCAACAACAGCTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CCA 72 bp GATGTAAAACAGATTGAGGTACTTGCCTCCACTAATTaGCTTCAGTTGGTCATGAGAAATCCTATGATATAC +
Preference number: 3 (lower is better)
Translates to: DVKQIEVLASTN*LQLVMRNPMIY
Trigger: GTATATCATAGGATTTCTCATGACCAACTGAAGCCAATTAGTGGAGGCAAGTACCTCAATCTGTTTTACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp GGTGCGGCCGCATGGGCCAAGATGGCACCCTGGCCCATTGCCAGGCCCCGTGAAGAAACTGCTGTTCCATaGTGCGAAGGCTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GAAAWAKMAPWPIARPREETAVP*CEGFSW
Trigger: CCAAGAAAAGCCTTCGCACCATGGAACAGCAGTTTC...TTCACGGGGCCTGGCAATGGGCCAGGGTGCCATCTTGGCCCATGCGGCCGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CAA 72 bp GTGCGGCCGCATGGGCCAAGATGGCACCCTGGCCCATaGCCAGGCCCCGTGAAACCCACATGTTTATTACTG +
Preference number: 4 (lower is better)
Translates to: VRPHGPRWHPGP*PGPVKPTCLLL
Trigger: CAGTAATAAACATGTGGGTTTCACGGGGCCTGGCAATGGGCCAGGGTGCCATCTTGGCCCATGCGGCCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp GGCAAGTGGTGGCCTGTACGGGGAAATTTTGGTAAGCTGTGGCAAGTGGTGGCCAGTTTTGCCCTGGCCTaGGCCTGCTCCACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GKWWPVRGNFGKLWQVVASFALA*ACSTWN
Trigger: GTTCCAGGTGGAGCAGGCGCAGGCCAGGGCAAAACT...GGCCACCACTTGCCACAGCTTACCAAAATTTCCCCGTACAGGCCACCACTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp CGGCCGCATGGGCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCCACATCCATCTTCAGCTaGCTCTGTATTACGTGGATA +
Preference number: 4 (lower is better)
Translates to: RPHGPRWCPGPLPGPVKPTSIFS*LCITWI
Trigger: TATCCACGTAATACAGAGCCAGCTGAAGATGGATGT...GGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGCCCATGCGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp CGGCCGCATGGGCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCCTCTGTTTCTACTACTTaGCGTGTTTGCTGTATTATC +
Preference number: 4 (lower is better)
Translates to: RPHGPRWCPGPLPGPVKPSVSTT*RVCCII
Trigger: GATAATACAGCAAACACGCCAAGTAGTAGAAACAGA...GGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGCCCATGCGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp GATAAACGAGCCTTAGTGCAGGCTATGGCAGCCTTGGAAGCTGGAACATCCCCCCTGCCAGCTCTTCATTaGGTCTCGCCAGTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: DKRALVQAMAALEAGTSPLPALH*VSPVLP
Trigger: GGGCAAAACTGGCGAGACTCAATGAAGAGCTGGCAG...GGGGGATGTTCCAGCTTCCAAGGCTGCCATAGCCTGCACTAAGGCTCGTTTATC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp CGTGCTGTCTGGAGCTCAGGCGTCTTCACATCACTGCTTCTTTCTTCCACACAGGTGGTGAACTGGGTTTaGCGTAGCCTGAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: RAVWSSGVFTSLLLSSTQVVNWV*RSLSSE
Trigger: CTCGGAGCTCAGGCTACGGCAAACCCAGTTCACCAC...CTGTGTGGAAGAAAGAAGCAGTGATGTGAAGACGCCTGAGCTCCAGACAGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp GATAAACGAGCCTTAGTGCAGGCTATGGCAGCCTTGGAAGCTGGAACATCCCCCTCTCAGTCTCTTCATTaGCCTCTCGGAGGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: DKRALVQAMAALEAGTSPSQSLH*PLGGEL
Trigger: CAGCTCGCCTCCGAGAGGCCAATGAAGAGACTGAGA...GGGGGATGTTCCAGCTTCCAAGGCTGCCATAGCCTGCACTAAGGCTCGTTTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp GATAAACGAGCCTTAGTGCAGGCTATGGCAGCCTTGGAAGCTGGAACATCCCCCTCGATCCTGATAGGCTaGATCAGCTCCTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: DKRALVQAMAALEAGTSPSILIG*ISSSTV
Trigger: CACAGTGGAGGAGCTGATGCAGCCTATCAGGATCGA...GGGGGATGTTCCAGCTTCCAAGGCTGCCATAGCCTGCACTAAGGCTCGTTTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp GCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCCACATTTACTGCTCTCTTCCTCCTGTTTaGGAAAGCTGTCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: AKMVPRPIARPRETHIYCSLPPV*ESCLFL
Trigger: CAGGAAAAGACAGCTTTCCCAAACAGGAGGAAGAGA...GCAGTAAATGTGGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CAA 72 bp AAGCTGTGTGAACCCCTCTTGGTGTCTGTGTCATTCTaGTCTCTGCGGGTTGGAGACTGCGGCAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: KLCEPLLVSVSF*SLRVGDCGRDC
Trigger: ACAGTCTCTGCCGCAGTCTCCAACCCGCAGAGACAAGAATGACACAGACACCAAGAGGGGTTCACACAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp GGCAAGTGGTGGCCTGTACGGGGAAATTTTGGTAAGCTGTGGCAAGTGGTGGCCTCTATTTCCCTCTCATaGGATGCTTTGAGGGACGCA +
Preference number: 4 (lower is better)
Translates to: GKWWPVRGNFGKLWQVVASISLS*DALRDA
Trigger: TGCGTCCCTCAAAGCATCTCATGAGAGGGAAATAGA...GGCCACCACTTGCCACAGCTTACCAAAATTTCCCCGTACAGGCCACCACTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp GCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCCACATTTACTGCTTCAAGTTGGCATACTaGTGCCTCAGATTCCATCTT +
Preference number: 4 (lower is better)
Translates to: AKMVPRPIARPRETHIYCFKLAY*CLRFHL
Trigger: AAGATGGAATCTGAGGCAGCAGTATGCCAACTTGAA...GCAGTAAATGTGGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp GTAAGGATGTGGCACGGATGGGGGCAACCTAAGACAGATGCTGATCTCAGAGCTCCCCGAGCTGGGACCTaGAAGTCTGGTTCATTTTGT +
Preference number: 4 (lower is better)
Translates to: VRMWHGWGQPKTDADLRAPRAGT*KSGSFC
Trigger: ACAAAATGAACCAGACTTCCAGGTCCCAGCTCGGGG...AGCTCTGAGATCAGCATCTGTCTTAGGTTGCCCCCATCCGTGCCACATCCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp GCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCCACATTTACTGCAAGCAGGCAAAGAGTTaGGATACCTTCTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: AKMVPRPIARPRETHIYCKQAKS*DTFSSE
Trigger: TTCTGAAGAGAAGGTATCCCAACTCTTTGCCTGCTT...GCAGTAAATGTGGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp ACTAGACCTGCCCTCCAGCAACAGACATGTCAAACTGTGCCACTGTCACTTTCTGCTTCCTTCTGCCTGTaGGCAAGCAGCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TRPALQQQTCQTVPLSLSASFCL*ASSCSC
Trigger: GCAGGAACAGCTGCTTGCCCACAGGCAGAAGGAAGC...AGAAAGTGACAGTGGCACAGTTTGACATGTCTGTTGCTGGAGGGCAGGTCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp CAGAGACTGTCCTCAGCACGAGGCTCTCATCCATCTATCTGTTTCATGAGAAAGTGTGTTCTCTTCGCCTaGGAGAGCCATGGGGACCAC +
Preference number: 4 (lower is better)
Translates to: QRLSSARGSHPSICFMRKCVLFA*ESHGDH
Trigger: GTGGTCCCCATGGCTCTCGCAGGCGAAGAGAACACA...CTTTCTCATGAAACAGATAGATGGATGAGAGCCTCGTGCTGAGGACAGTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp CTGCTGACAGCTGATGAGACTTGTGGGAAGTGGGTGCGGCCGCATGGGCCAAGAGATCCTGAATTCTTTTaGCATCAAGAGCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LLTADETCGKWVRPHGPRDPEFF*HQELFP
Trigger: AGGAAAGAGCTCTTGATGCCAAAAGAATTCAGGATC...TCTTGGCCCATGCGGCCGCACCCACTTCCCACAAGTCTCATCAGCTGTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp GGTGTCTGTGTCATTCTTGTCTCTGCGGGTTGGAGACTGCGGCAGAGACTGTCCGCATGTCTAGTGTCTTaGGACACAGTGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: GVCVILVSAGWRLRQRLSACLVS*DTVFVF
Trigger: AAACACAAACACTGTGTCTCAAGACACTAGACATGC...GGACAGTCTCTGCCGCAGTCTCCAACCCGCAGAGACAAGAATGACACAGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp GTAAGGATGTGGCACGGATGGGGGCAACCTAAGACAGATGCTGATCTCAGAGCTTCTCTTGGTTCAGTCTaGAGAGCTCTCTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: VRMWHGWGQPKTDADLRASLGSV*RALSPV
Trigger: AACAGGAGAGAGAGCTCTTCAGACTGAACCAAGAGA...AGCTCTGAGATCAGCATCTGTCTTAGGTTGCCCCCATCCGTGCCACATCCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp CGTGCTGTCTGGAGCTCAGGCGTCTTCACATCACTGCTTCTTTCTTCCACACAGTGCCGCTCCAGATCCTaGATTCTTTTGGCATCAAGA +
Preference number: 4 (lower is better)
Translates to: RAVWSSGVFTSLLLSSTQCRSRS*ILLASR
Trigger: TCTTGATGCCAAAAGAATTCAGGATCTGGAGCGGCA...CTGTGTGGAAGAAAGAAGCAGTGATGTGAAGACGCCTGAGCTCCAGACAGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp CGTGCTGTCTGGAGCTCAGGCGTCTTCACATCACTGCTTCTTTCTTCCACACAGGAGCTCCTGACAGTTTaGACAGTGCTAGCCTCAATT +
Preference number: 4 (lower is better)
Translates to: RAVWSSGVFTSLLLSSTQELLTV*TVLASI
Trigger: AATTGAGGCTAGCACTGTGCAAACTGTCAGGAGCTC...CTGTGTGGAAGAAAGAAGCAGTGATGTGAAGACGCCTGAGCTCCAGACAGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp ATGAACAACACCCGTGTGGAGATTACAACTGCAAAGCAATGGCTGGAGATCATCGACAGCTGCTGCCCATaGCCTCATCTGCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: MNNTRVEITTAKQWLEIIDSCCP*PHLLSC
Trigger: ACAGGACAGCAGATGAGGGCATGGGCAGCAGCTGTC...GATGATCTCCAGCCATTGCTTTGCAGTTGTAATCTCCACACGGGTGTTGTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp TCCGGATCTGTCAGCCTATCTGTGACTGATCTGAGCTCGTGCCTGGAGTGTGTGAGCCTTTCTCAAGCCTaGCAAAGAACTGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SGSVSLSVTDLSSCLECVSLSQA*QRTALS
Trigger: AGAAAGAGCAGTTCTTTGCCAGGCTTGAGAAAGGCT...CACACACTCCAGGCACGAGCTCAGATCAGTCACAGATAGGCTGACAGATCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp TCCGGATCTGTCAGCCTATCTGTGACTGATCTGAGCTCGTGCCTGGAGTGTGTGGTGTCCATAACAGGCTaGTATGTCTTCTTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SGSVSLSVTDLSSCLECVVSITG*YVFFVF
Trigger: GAAGACAAAGAAGACATATCAGCCTGTTATGGACAC...CACACACTCCAGGCACGAGCTCAGATCAGTCACAGATAGGCTGACAGATCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp GGTGGTGTGGAGCGAGATGAGGTCAGTTGCTGCTACTGTATAAATATATCTCTTCTGTTACGCTGGCTCTaGGGAGCTTCCTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GGVERDEVSCCYCINISLLLRWL*GASFCL
Trigger: CAGGCAGAAGGAAGCTCCGCAGAGCCAGCGTAACAG...AAGAGATATATTTATACAGTAGCAGCAACTGACCTCATCTCGCTCCACACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp CTGCTGACAGCTGATGAGACTTGTGGGAAGTGGGTGCGGCCGCATGGGCCAAGAATAATTTTTCACCTGTaGCATAGGCGATTTGATCTT +
Preference number: 4 (lower is better)
Translates to: LLTADETCGKWVRPHGPRIIFHL*HRRFDL
Trigger: AAGATCAAATCGCCTATGCCACAGGTGAAAAATTAT...TCTTGGCCCATGCGGCCGCACCCACTTCCCACAAGTCTCATCAGCTGTCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp TCCGGATCTGTCAGCCTATCTGTGACTGATCTGAGCTCGTGCCTGGAGTGTGTGTTCATTTTGTCATCCTaGGGTAATAGTGAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: SGSVSLSVTDLSSCLECVFILSS*GNSEGL
Trigger: TAACCCCTCACTATTACCTCAGGATGACAAAATGAA...CACACACTCCAGGCACGAGCTCAGATCAGTCACAGATAGGCTGACAGATCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp ATGAACAACACCCGTGTGGAGATTACAACTGCAAAGCAATGGCTGGAGATCATCGAACCTGTTTACCAATaGCAGGCACCTCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: MNNTRVEITTAKQWLEIIEPVYQ*QAPLPQ
Trigger: CTGGGGAAGAGGTGCCTGTCATTGGTAAACAGGTTC...GATGATCTCCAGCCATTGCTTTGCAGTTGTAATCTCCACACGGGTGTTGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp GTAAGGATGTGGCACGGATGGGGGCAACCTAAGACAGATGCTGATCTCAGAGCTCTTTGCTTTAGGGGTTaGTTTCTCTTGACTGCTAAG +
Preference number: 4 (lower is better)
Translates to: VRMWHGWGQPKTDADLRALCFRG*FLLTAK
Trigger: CTTAGCAGTCAAGAGAAAGCAACCCCTAAAGCAAAG...AGCTCTGAGATCAGCATCTGTCTTAGGTTGCCCCCATCCGTGCCACATCCTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp ATGAACAACACCCGTGTGGAGATTACAACTGCAAAGCAATGGCTGGAGATCATCGGGGTTGCTTTCTCTTaGCTGCTAAGGCCAACATCT +
Preference number: 4 (lower is better)
Translates to: MNNTRVEITTAKQWLEIIGVAFS*LLRPTS
Trigger: AGATGTTGGCCTTAGCAGTCAAGAGAAAGCAACCCC...GATGATCTCCAGCCATTGCTTTGCAGTTGTAATCTCCACACGGGTGTTGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp TCCGGATCTGTCAGCCTATCTGTGACTGATCTGAGCTCGTGCCTGGAGTGTGTGTGCAGCTCATTAACTTaGCCTTGGAAATGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: SGSVSLSVTDLSSCLECVCSSLT*PWKCFR
Trigger: TCTAAAACATTTCCAAGGTCAAGTTAATGAGCTGCA...CACACACTCCAGGCACGAGCTCAGATCAGTCACAGATAGGCTGACAGATCCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp ACTAGACCTGCCCTCCAGCAACAGACATGTCAAACTGTGCCACTGTCACTTTCTCTTCAGTGTCACCACTaGTTTGTCCATAAGGAACAC +
Preference number: 4 (lower is better)
Translates to: TRPALQQQTCQTVPLSLSLQCHH*FVHKEH
Trigger: GTGTTCCTTATGGACAAAGCAGTGGTGACACTGAAG...AGAAAGTGACAGTGGCACAGTTTGACATGTCTGTTGCTGGAGGGCAGGTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp ATGTGTAAGCTGCCTGCCAAGTTAGATTATTCTTGTGATCCGGATCTGTCAGCCTGCTCTCTCTGCCTATaGCTCATCTCCATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: MCKLPAKLDYSCDPDLSACSLCL*LISICL
Trigger: CAAGCAGATGGAGATGAGGCATAGGCAGAGAGAGCA...GGCTGACAGATCCGGATCACAAGAATAATCTAACTTGGCAGGCAGCTTACACAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp ACTAGACCTGCCCTCCAGCAACAGACATGTCAAACTGTGCCACTGTCACTTTCTAAGAAGGTGTGCTTCTaGCCTTCTTACATGGAACCT +
Preference number: 4 (lower is better)
Translates to: TRPALQQQTCQTVPLSLSKKVCF*PSYMEP
Trigger: AGGTTCCATGTAAGAAGGCCAGAAGCACACCTTCTT...AGAAAGTGACAGTGGCACAGTTTGACATGTCTGTTGCTGGAGGGCAGGTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp GGTGGTGTGGAGCGAGATGAGGTCAGTTGCTGCTACTGTATAAATATATCTCTTCCTCTGCTGAGTAGCTaGGCTCCCAGACTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: GGVERDEVSCCYCINISLPLLSS*APRLSF
Trigger: AAAACTGAGTCTGGGAGCCCAGCTACTCAGCAGAGG...AAGAGATATATTTATACAGTAGCAGCAACTGACCTCATCTCGCTCCACACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp GCTGCAAATCTGTCACATGCAATTGGTGCGATGCTGCTAGGATCTCGACACAAATCCTTTCTAAGCCCATaGAATGCTTCATCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: AANLSHAIGAMLLGSRHKSFLSP*NASSLV
Trigger: CACCAGAGATGAAGCATTTCATGGGCTTAGAAAGGA...TTTGTGTCGAGATCCTAGCAGCATCGCACCAATTGCATGTGACAGATTTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp ACAGTTAATATTTGCTTCCTGCATTACTCATATGCCAGGAATGTGTGTAACCTCTGCGGAGCTTCCTTCTaGCTGTGGGCAAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TVNICFLHYSYARNVCNLCGASF*LWASSC
Trigger: ACAGCTGCTTGCCCACAGGCAGAAGGAAGCTCCGCA...GAGGTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp GGTGGTGTGGAGCGAGATGAGGTCAGTTGCTGCTACTGTATAAATATATCTCTTGTGGGTGATACAGTTTaGCATCCAGGGTTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GGVERDEVSCCYCINISLVGDTV*HPGFQG
Trigger: TCCCTGAAACCCTGGATGGCAAACTGTATCACCCAC...AAGAGATATATTTATACAGTAGCAGCAACTGACCTCATCTCGCTCCACACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp ACAGTTAATATTTGCTTCCTGCATTACTCATATGCCAGGAATGTGTGTAACCTCCAAGGGCCTTCAGCCTaGATGAGCTGTTACGCTGGC +
Preference number: 4 (lower is better)
Translates to: TVNICFLHYSYARNVCNLQGPSA*MSCYAG
Trigger: GCCAGCGTAACAGCTCATCCAGGCTGAAGGCCCTTG...GAGGTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp GATGGATCTGAAGGTGGTGTGGGAGTAGTTTATGTTGAAGGAAATCAACCCCAATTAAGGCTGATAGGCTaGAAGTCAAAGGCCCTGATC +
Preference number: 4 (lower is better)
Translates to: DGSEGGVGVVYVEGNQPQLRLIG*KSKALI
Trigger: GATCAGGGCCTTTGACTTGCAGCCTATCAGCCTTAA...TTGGGGTTGATTTCCTTCAACATAAACTACTCCCACACCACCTTCAGATCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp ACAGTTAATATTTGCTTCCTGCATTACTCATATGCCAGGAATGTGTGTAACCTCTCTCATGAGATGCTTTaGGGGACGCAATGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: TVNICFLHYSYARNVCNLSHEML*GTQCAL
Trigger: CAGCGCACATTGCGTCCCTCAAAGCATCTCATGAGA...GAGGTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp ATGAACAACACCCGTGTGGAGATTACAACTGCAAAGCAATGGCTGGAGATCATCTACATTTTGTCCAAATaGTCCTCTGTAGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: MNNTRVEITTAKQWLEIIYILSK*SSVAGQ
Trigger: CTGTCCAGCTACAGAGGAGCATTTGGACAAAATGTA...GATGATCTCCAGCCATTGCTTTGCAGTTGTAATCTCCACACGGGTGTTGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp CAGAGACTGTCCTCAGCACGAGGCTCTCATCCATCTATCTGTTTCATGAGAAAGAAGTACCTCTTGAGTTaGGATTTTGCGATTCAGTTC +
Preference number: 4 (lower is better)
Translates to: QRLSSARGSHPSICFMRKKYLLS*DFAIQF
Trigger: GAACTGAATCGCAAAATCGCAACTCAAGAGGTACTT...CTTTCTCATGAAACAGATAGATGGATGAGAGCCTCGTGCTGAGGACAGTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp ACCCGTTCCTTAGGAAACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTACTGGAGTGGTGAACTaGGTTTGCCGTAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: TRSLGNILLCKYYFRTAFTGVVN*VCRSLS
Trigger: GCTCAGGCTACGGCAAACCCAGTTCACCACTCCAGT...AAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTTTCCTAAGGAACGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp ACCCGTTCCTTAGGAAACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTCCACCTGGAACTCTATaGACTGGAGGCCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: TRSLGNILLCKYYFRTAFPPGTL*TGGPDL
Trigger: GAGATCAGGGCCTCCAGTCCATAGAGTTCCAGGTGG...AAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTTTCCTAAGGAACGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp AACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTGCTGGCACGGGCAGTTGCTGTATTATCTGTTaGAGCTCCTGCTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: NILLCKYYFRTAFAGTGSCCIIC*SSCSLC
Trigger: GCAGAGAGAGCAGGAGCTCCAACAGATAATACAGCA...ACTGCCCGTGCCAGCAAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp ACAGTTAATATTTGCTTCCTGCATTACTCATATGCCAGGAATGTGTGTAACCTCTCAGAACGTCCAGTATaGAGTCCAGCTCTGTGCGGA +
Preference number: 4 (lower is better)
Translates to: TVNICFLHYSYARNVCNLSERPV*SPALCG
Trigger: TCCGCACAGAGCTGGACTCCATACTGGACGTTCTGA...GAGGTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CAA 72 bp GTATTATTTCAGGACTGCATTTGCTGGCACGGGCAGTaGGAATGTCATCTAACACAAGATGTGCTACTGATG +
Preference number: 4 (lower is better)
Translates to: VLFQDCICWHGQ*ECHLTQDVLLM
Trigger: CATCAGTAGCACATCTTGTGTTAGATGACATTCCAACTGCCCGTGCCAGCAAATGCAGTCCTGAAATAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CAA 72 bp ACGCTTCTATTTAACAGGGGATTTACTTCACAACCTTaGCTCATGAGTTCACTAAGACTTGCCCACCCGTTC +
Preference number: 4 (lower is better)
Translates to: TLLFNRGFTSQP*LMSSLRLAHPF
Trigger: GAACGGGTGGGCAAGTCTTAGTGAACTCATGAGCAAAGGTTGTGAAGTAAATCCCCTGTTAAATAGAAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp ATGAACAACACCCGTGTGGAGATTACAACTGCAAAGCAATGGCTGGAGATCATCCTGCTCTTAAGAAACTaGACTTTTTCAGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: MNNTRVEITTAKQWLEIILLLRN*TFSADS
Trigger: GGAATCTGCTGAAAAAGTTCAGTTTCTTAAGAGCAG...GATGATCTCCAGCCATTGCTTTGCAGTTGTAATCTCCACACGGGTGTTGTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp AACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTGCTGGCACGGGCAGTAACAAAGGAATCATCTaGGGGGTCTTCAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: NILLCKYYFRTAFAGTGSNKGII*GVFRSL
Trigger: AAGAGACCTGAAGACCCCTCAGATGATTCCTTTGTT...ACTGCCCGTGCCAGCAAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp AACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTGCTGGCACGGGCAGTTCATCTCCATCTGCTTaGTCTTCCTTTCTAAGCCCA +
Preference number: 4 (lower is better)
Translates to: NILLCKYYFRTAFAGTGSSSPSA*SSFLSP
Trigger: TGGGCTTAGAAAGGAAGATCAAGCAGATGGAGATGA...ACTGCCCGTGCCAGCAAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp TGCATTACTCATATGCCAGGAATGTGTGTAACCTCTGTTCAGTATCAGAATTTTCTCTCTCCCCTTCGCTaGCAGCTCTTCATTGAGTCT +
Preference number: 4 (lower is better)
Translates to: CITHMPGMCVTSVQYQNFLSPLR*QLFIES
Trigger: AGACTCAATGAAGAGCTGGCAGCGAAGGGGAGAGAG...AAAATTCTGATACTGAACAGAGGTTACACACATTCCTGGCATATGAGTAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp TTGGCTTCAGTTGGTCATGAGAAATCCTATGATATACCCCAGAATTACCCGGACTCGAACTTGAGAAACTaGAAGGGATTCCTGTTTACC +
Preference number: 4 (lower is better)
Translates to: LASVGHEKSYDIPQNYPDSNLRN*KGFLFT
Trigger: GGTAAACAGGAATCCCTTGCAGTTTCTCAAGTTCGA...GTCCGGGTAATTCTGGGGTATATCATAGGATTTCTCATGACCAACTGAAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp GGAACAGTTAATATTTGCTTCCTGCATTACTCATATGCCAGGAATGTGTGTAACATCCTTCTCTCCTTCTaGAGCCTCTCCACGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GTVNICFLHYSYARNVCNILLSF*SLSTVF
Trigger: AAAGACCGTGGAGAGGCTCCAGAAGGAGAGAAGGAT...GTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp GAATGGAAGTTAAAACTGTCATTTAAACTGAGGACACTACACTCTGCTGACAGCCCAGCTTTCTTACAGTaGTCTGATGGGCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: EWKLKLSFKLRTLHSADSPAFLQ*SDGLPL
Trigger: TAAAGGAAGCCCATCAGATCACTGTAAGAAAGCTGG...GCTGTCAGCAGAGTGTAGTGTCCTCAGTTTAAATGACAGTTTTAACTTCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp ACCCGTTCCTTAGGAAACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTGTAAAGGTGTGTGGGTaGTACAGTTTGCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: TRSLGNILLCKYYFRTAFVKVCG*YSLPSR
Trigger: CCTGGATGGCAAACTGTATCACCCACACACCTTTAC...AAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTTTCCTAAGGAACGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CAA 72 bp CAGATTGAGGTACTTGCCTCCACTAATTGGCTTCAGTaGGTCATGAGAAATCCTATGATATACCCCAGAATT +
Preference number: 4 (lower is better)
Translates to: QIEVLASTNWLQ*VMRNPMIYPRI
Trigger: AATTCTGGGGTATATCATAGGATTTCTCATGACCAACTGAAGCCAATTAGTGGAGGCAAGTACCTCAATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CAA 72 bp ACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTaGCTGGCACGGGCAGTTGGAATGTCATCTAACACA +
Preference number: 4 (lower is better)
Translates to: TFYFASIISGLH*LARAVGMSSNT
Trigger: TGTGTTAGATGACATTCCAACTGCCCGTGCCAGCAAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp TTCAGTATCAGAATTTTTCCAGAGCTGCAAATCTGTCACATGCAATTGGTGCGACAGTTCCTCTTGTTCTaGTTCATTCTCACATCCATC +
Preference number: 4 (lower is better)
Translates to: FSIRIFPELQICHMQLVRQFLLF*FILTSI
Trigger: GATGGATGTGAGAATGAATCAGAACAAGAGGAACTG...TCGCACCAATTGCATGTGACAGATTTGCAGCTCTGGAAAAATTCTGATACTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp GGAACAGTTAATATTTGCTTCCTGCATTACTCATATGCCAGGAATGTGTGTAACTCTAAGCCCATGAAATaGTTCATCTCTGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GTVNICFLHYSYARNVCNSKPMK*FISGVW
Trigger: CCACACACCAGAGATGAAGCATTTCATGGGCTTAGA...GTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp TTCAGTATCAGAATTTTTCCAGAGCTGCAAATCTGTCACATGCAATTGGTGCGATATCCACCAAGGCACTaGGTCTTTCTTCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: FSIRIFPELQICHMQLVRYPPRH*VFLLHF
Trigger: GAAATGAAGAAGAAAGACCCAGTGCCTTGGTGGATA...TCGCACCAATTGCATGTGACAGATTTGCAGCTCTGGAAAAATTCTGATACTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp ACCCGTTCCTTAGGAAACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTGTCGTCTGTTATTTCTaGAGGGGCCTTTGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: TRSLGNILLCKYYFRTAFVVCYF*RGLCFR
Trigger: CCTAAAGCAAAGGCCCCTCCAGAAATAACAGACGAC...AAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTTTCCTAAGGAACGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp GGAACAGTTAATATTTGCTTCCTGCATTACTCATATGCCAGGAATGTGTGTAACGTACAGTCCACTCTGTaGCTTTCTCTTAGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GTVNICFLHYSYARNVCNVQSTL*LSLRQR
Trigger: TCTTTGCCTAAGAGAAAGCCACAGAGTGGACTGTAC...GTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp ACAGTTAATATTTGCTTCCTGCATTACTCATATGCCAGGAATGTGTGTAACCTCCCCATGTCCTCTGTTTaGGTCTTTCTTCAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: TVNICFLHYSYARNVCNLPMSSV*VFLQPF
Trigger: AAAAGGCTGAAGAAAGACCCAAACAGAGGACATGGG...GAGGTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp ACAGTTAATATTTGCTTCCTGCATTACTCATATGCCAGGAATGTGTGTAACCTCATTTCTTCTCGAACTTaGGAAACTGCAAGGGATTCC +
Preference number: 4 (lower is better)
Translates to: TVNICFLHYSYARNVCNLISSRT*ETARDS
Trigger: GGAATCCCTTGCAGTTTCTCAAGTTCGAGAAGAAAT...GAGGTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp ACCCGTTCCTTAGGAAACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTAAGTTGGCATACTGCTaGCTCAGATTCCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: TRSLGNILLCKYYFRTAFKLAYC*LRFHLQ
Trigger: CTGAAGATGGAATCTGAGGCAGCAGTATGCCAACTT...AAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTTTCCTAAGGAACGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp GGAACAGTTAATATTTGCTTCCTGCATTACTCATATGCCAGGAATGTGTGTAACACTACTTGGCGTGTTTaGTGTATTATCTGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: GTVNICFLHYSYARNVCNTTWRV*CIICWS
Trigger: GCTCCAACAGATAATACAGCAAACACGCCAAGTAGT...GTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp ACCCGTTCCTTAGGAAACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTAGGGCTGAAAATAACTaGAGTGGTGAACTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: TRSLGNILLCKYYFRTAFRAENN*SGELGL
Trigger: CAAACCCAGTTCACCACTCCAGTTATTTTCAGCCCT...AAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTTTCCTAAGGAACGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp TTTGGTAAACAACCTGATGTAAAACAGATTGAGGTACTTGCCTCCACTAATTGGTGGTTTATTCGAAGCTaGAGGCTTGATGAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: FGKQPDVKQIEVLASTNWWFIRS*RLDEFC
Trigger: ACAAAACTCATCAAGCCTGCAGCTTCGAATAAACCA...CCAATTAGTGGAGGCAAGTACCTCAATCTGTTTTACATCAGGTTGTTTACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp TTTGGTAAACAACCTGATGTAAAACAGATTGAGGTACTTGCCTCCACTAATTGGCTTGAGTTGCGATTTTaGGATTCAGTTCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: FGKQPDVKQIEVLASTNWLELRF*DSVQLL
Trigger: AAGTAGCTGAACTGAATCGCAAAATCGCAACTCAAG...CCAATTAGTGGAGGCAAGTACCTCAATCTGTTTTACATCAGGTTGTTTACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp ACCCGTTCCTTAGGAAACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTTGCCTCATCTCCATCTaGTTGATCTTCCTTTCTAAG +
Preference number: 4 (lower is better)
Translates to: TRSLGNILLCKYYFRTAFCLISI*LIFLSK
Trigger: CTTAGAAAGGAAGATCAAGCAGATGGAGATGAGGCA...AAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTTTCCTAAGGAACGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp ACAGTTAATATTTGCTTCCTGCATTACTCATATGCCAGGAATGTGTGTAACCTCACTCAGAGTTTTCTTTaGGATGGGTCTCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: TVNICFLHYSYARNVCNLTQSFL*DGSLHL
Trigger: AAGATGAAGAGACCCATCCCAAAGAAAACTCTGAGT...GAGGTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CAA 72 bp CTCATGTATTTCCCTATCAACCTGCACAAGCTGTTGTaGGAACAGTTAATATTTGCTTCCTGCATTACTCAT +
Preference number: 4 (lower is better)
Translates to: LMYFPINLHKLL*EQLIFASCITH
Trigger: ATGAGTAATGCAGGAAGCAAATATTAACTGTTCCAACAACAGCTTGTGCAGGTTGATAGGGAAATACATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
3UTR CAA 72 bp AAGCTCATGTATTTCCCTATCAACCTGCACAAGCTGTaGTTGGAACAGTTAATATTTGCTTCCTGCATTACT +
Preference number: 4 (lower is better)
Translates to: KLMYFPINLHKL*LEQLIFASCIT
Trigger: AGTAATGCAGGAAGCAAATATTAACTGTTCCAACAACAGCTTGTGCAGGTTGATAGGGAAATACATGAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR TCA 90 bp ACCCGTTCCTTAGGAAACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTTTTTCTAAATTGATTTaGGGTGGGAATGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: TRSLGNILLCKYYFRTAFFSKLI*GGNGSH
Trigger: GTGAGATCCATTCCCACCTCAAATCAATTTAGAAAA...AAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTTTCCTAAGGAACGGGT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR GCA 90 bp TGCATTACTCATATGCCAGGAATGTGTGTAACCTCTGTTCAGTATCAGAATTTTAATGTCATTTTCATTTaGTCCATCAGTGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: CITHMPGMCVTSVQYQNFNVIFI*SISACA
Trigger: TGCACAAGCACTGATGGAGCAAATGAAAATGACATT...AAAATTCTGATACTGAACAGAGGTTACACACATTCCTGGCATATGAGTAATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CCA 90 bp ACCCGTTCCTTAGGAAACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTTCAGTTCAGCTACTTTaGAAGAGGAGTTTTCTATTG +
Preference number: 4 (lower is better)
Translates to: TRSLGNILLCKYYFRTAFSVQLL*KRSFLL
Trigger: CAATAGAAAACTCCTCTTCCAAAGTAGCTGAACTGA...AAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTTTCCTAAGGAACGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp CGGCCGCATGGGCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCCAGCTCTGTGCGGAACTaGTCCAGCTCCCGATTCTTT +
Preference number: 5 (lower is better)
Translates to: RPHGPRWCPGPLPGPVKPSSVRN*SSSRFF
Trigger: AAAGAATCGGGAGCTGGACAAGTTCCGCACAGAGCT...GGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGCCCATGCGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 90 bp TCTGTCTCAAGGGCCTTCAGCCTGGATGAGCTGTTACGCTGGCTCTaGGGAGCTTCCTTCTGCCTGTGGGCAAGCAGCTGTTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SVSRAFSLDELLRWL*GASFCLWASSCSCS
Trigger: GGAGCAGGAACAGCTGCTTGCCCACAGGCAGAAGGAAGCTCCGCAGAGCCAGCGTAACAGCTCATCCAGGCTGAAGGCCCTTGAGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp CGGCCGCATGGGCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCCACACAGTGTTTGTGTTaGTCTTCAGGGGTAAAGAGC +
Preference number: 5 (lower is better)
Translates to: RPHGPRWCPGPLPGPVKPTQCLC*SSGVKS
Trigger: GCTCTTTACCCCTGAAGACAAACACAAACACTGTGT...GGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGCCCATGCGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp CGGCCGCATGGGCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCCGATTTGATCTTTGGCTaGGTCCCTCTCTCTCTTAAC +
Preference number: 5 (lower is better)
Translates to: RPHGPRWCPGPLPGPVKPDLIFG*VPLSLN
Trigger: GTTAAGAGAGAGAGGGACCAAGCCAAAGATCAAATC...GGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGCCCATGCGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 90 bp TTCCTTTATGTCCCCAAGTTCTGTCTCAAGGGCCTTCAGCCTGGATaGGCTGTTACGCTGGCTCTGCGGAGCTTCCTTCTGCCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: FLYVPKFCLKGLQPG*AVTLALRSFLLPVG
Trigger: GCCCACAGGCAGAAGGAAGCTCCGCAGAGCCAGCGTAACAGCTCATCCAGGCTGAAGGCCCTTGAGACAGAACTTGGGGACATAAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 90 bp CCTCTCCACGGTCTTTGTAAGGTCTTGTATCTCTCTCCCCTTCGCTaGCAGCTCTTCATTGAGTCTCGCCAGTTTTGCCCTGGCCTGCGC +
Preference number: 5 (lower is better)
Translates to: PLHGLCKVLYLSPLR*QLFIESRQFCPGLR
Trigger: GCGCAGGCCAGGGCAAAACTGGCGAGACTCAATGAAGAGCTGGCAGCGAAGGGGAGAGAGATACAAGACCTTACAAAGACCGTGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 90 bp GGGCTTCCTTTATGTCCCCAAGTTCTGTCTCAAGGGCCTTCAGCCTaGATGAGCTGTTACGCTGGCTCTGCGGAGCTTCCTTCTGCCTGT +
Preference number: 5 (lower is better)
Translates to: GLPLCPQVLSQGPSA*MSCYAGSAELPSAC
Trigger: ACAGGCAGAAGGAAGCTCCGCAGAGCCAGCGTAACAGCTCATCCAGGCTGAAGGCCCTTGAGACAGAACTTGGGGACATAAAGGAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 90 bp GGACCACAACCCCTTGTCGGTGCAGCTCCCTCAGAACGTCCAGTATaGAGTCCAGCTCTGTGCGGAACTTGTCCAGCTCCCGATTCTTTA +
Preference number: 5 (lower is better)
Translates to: GPQPLVGAAPSERPV*SPALCGTCPAPDSL
Trigger: TAAAGAATCGGGAGCTGGACAAGTTCCGCACAGAGCTGGACTCCATACTGGACGTTCTGAGGGAGCTGCACCGACAAGGGGTTGTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp CTGCTGACAGCTGATGAGACTTGTGGGAAGTGGGTGCGGCCGCATGGGCCAAGAAGGGGTTGCTTTCTCTaGACTGCTAAGGCCAACATC +
Preference number: 5 (lower is better)
Translates to: LLTADETCGKWVRPHGPRRGCFL*TAKANI
Trigger: GATGTTGGCCTTAGCAGTCAAGAGAAAGCAACCCCT...TCTTGGCCCATGCGGCCGCACCCACTTCCCACAAGTCTCATCAGCTGTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp CGGCCGCATGGGCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCCTTCAGTTCAGCTACTTaGGAAGAGGAGTTTTCTATT +
Preference number: 5 (lower is better)
Translates to: RPHGPRWCPGPLPGPVKPFSSAT*EEEFSI
Trigger: AATAGAAAACTCCTCTTCCAAAGTAGCTGAACTGAA...GGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGCCCATGCGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp GGTGCGGCCGCATGGGCCAAGATGGCACCCTGGCCCATTGCCAGGCCCCGTGAACATTTCTCAACTTCCTaGTTTTGCTCTGTTTCTACT +
Preference number: 5 (lower is better)
Translates to: GAAAWAKMAPWPIARPREHFSTS*FCSVST
Trigger: AGTAGAAACAGAGCAAAACAAGGAAGTTGAGAAATG...TTCACGGGGCCTGGCAATGGGCCAGGGTGCCATCTTGGCCCATGCGGCCGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 90 bp CTGCTCCTGGGGATCTGCCTCGACAGCATCATCCTTCTCTCCTTCTaGAGCCTCTCCACGGTCTTTGTAAGGTCTTGTATCTCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: LLLGICLDSIILLSF*SLSTVFVRSCISLP
Trigger: GGGGAGAGAGATACAAGACCTTACAAAGACCGTGGAGAGGCTCCAGAAGGAGAGAAGGATGATGCTGTCGAGGCAGATCCCCAGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 90 bp GGAAAGCATTCCCATGTCCTCTGTTTGGGTCTTTCTTCAGCCTTTTaGCAGCCGTCTCCTCTCTGCTCCTGGGGATCTGCCTCGACAGCA +
Preference number: 5 (lower is better)
Translates to: GKHSHVLCLGLSSAF*QPSPLCSWGSASTA
Trigger: TGCTGTCGAGGCAGATCCCCAGGAGCAGAGAGGAGACGGCTGCCAAAAGGCTGAAGAAAGACCCAAACAGAGGACATGGGAATGCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp GTAAGGATGTGGCACGGATGGGGGCAACCTAAGACAGATGCTGATCTCAGAGCTGGGTCTTCAGGTCTCTaGGGTGTAGCTGGGCTACCT +
Preference number: 5 (lower is better)
Translates to: VRMWHGWGQPKTDADLRAGSSGL*GVAGLP
Trigger: AGGTAGCCCAGCTACACCCAAGAGACCTGAAGACCC...AGCTCTGAGATCAGCATCTGTCTTAGGTTGCCCCCATCCGTGCCACATCCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp GCTGCAAATCTGTCACATGCAATTGGTGCGATGCTGCTAGGATCTCGACACAAAGGGGACCACAACCCCTaGTCGGTGCAGCTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: AANLSHAIGAMLLGSRHKGDHNP*SVQLPQ
Trigger: CTGAGGGAGCTGCACCGACAAGGGGTTGTGGTCCCC...TTTGTGTCGAGATCCTAGCAGCATCGCACCAATTGCATGTGACAGATTTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 90 bp AAGAAGGTGTGCTTCTGGCCTTCTTACATGGAACCTGTTTACCAATaGCAGGCACCTCTTCCCCAGCCCCGAGCTGGGACCTGGAAGTCT +
Preference number: 5 (lower is better)
Translates to: KKVCFWPSYMEPVYQ*QAPLPQPRAGTWKS
Trigger: AGACTTCCAGGTCCCAGCTCGGGGCTGGGGAAGAGGTGCCTGTCATTGGTAAACAGGTTCCATGTAAGAAGGCCAGAAGCACACCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp GCCAAGATGGTGCCCAGGCCCATTGCCAGGCCCCGTGAAACCCACATTTACTGCTTCTCTTCCTCCTGTTaGGGAAAGCTGTCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: AKMVPRPIARPRETHIYCFSSSC*GKLSFP
Trigger: AGGAAAAGACAGCTTTCCCAAACAGGAGGAAGAGAA...GCAGTAAATGTGGGTTTCACGGGGCCTGGCAATGGGCCTGGGCACCATCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 90 bp GTCGGTGCAGCTCCCTCAGAACGTCCAGTATGGAGTCCAGCTCTGTaGGGAACTTGTCCAGCTCCCGATTCTTTAACTGTGCAAGTCTTT +
Preference number: 5 (lower is better)
Translates to: VGAAPSERPVWSPAL*GTCPAPDSLTVQVF
Trigger: AAAGACTTGCACAGTTAAAGAATCGGGAGCTGGACAAGTTCCGCACAGAGCTGGACTCCATACTGGACGTTCTGAGGGAGCTGCACCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp GTAAGGATGTGGCACGGATGGGGGCAACCTAAGACAGATGCTGATCTCAGAGCTCTCTCCTGTTGCCTCTaGAGGCTTTCCACTGTGTTC +
Preference number: 5 (lower is better)
Translates to: VRMWHGWGQPKTDADLRALSCCL*RLSTVF
Trigger: GAACACAGTGGAAAGCCTCAAGAGGCAACAGGAGAG...AGCTCTGAGATCAGCATCTGTCTTAGGTTGCCCCCATCCGTGCCACATCCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 90 bp GAGCTACATGACAGTAAGCTTGGTGCAGGGCTTCAGTGTCACCACTaGTTTGTCCATAAGGAACACCTGTTTCTGCTGGTCCGTCGTCTG +
Preference number: 5 (lower is better)
Translates to: ELHDSKLGAGLQCHH*FVHKEHLFLLVRRL
Trigger: CAGACGACGGACCAGCAGAAACAGGTGTTCCTTATGGACAAAGCAGTGGTGACACTGAAGCCCTGCACCAAGCTTACTGTCATGTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 90 bp GGCTTCAGTGTCACCACTGCTTTGTCCATAAGGAACACCTGTTTCTaGTGGTCCGTCGTCTGTTATTTCTGGAGGGGCCTTTGCTTTAGG +
Preference number: 5 (lower is better)
Translates to: GFSVTTALSIRNTCF*WSVVCYFWRGLCFR
Trigger: CCTAAAGCAAAGGCCCCTCCAGAAATAACAGACGACGGACCAGCAGAAACAGGTGTTCCTTATGGACAAAGCAGTGGTGACACTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp GTAAGGATGTGGCACGGATGGGGGCAACCTAAGACAGATGCTGATCTCAGAGCTGTGTTTGTGGGGAAATaGGATCGCATGTCTAGTGTC +
Preference number: 5 (lower is better)
Translates to: VRMWHGWGQPKTDADLRAVFVGK*DRMSSV
Trigger: GACACTAGACATGCGATCCAATTTCCCCACAAACAC...AGCTCTGAGATCAGCATCTGTCTTAGGTTGCCCCCATCCGTGCCACATCCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp GGCAAGTGGTGGCCTGTACGGGGAAATTTTGGTAAGCTGTGGCAAGTGGTGGCCGAAGTACCTCTTGAGTaGCGATTTTGCGATTCAGTT +
Preference number: 5 (lower is better)
Translates to: GKWWPVRGNFGKLWQVVAEVPLE*RFCDSV
Trigger: AACTGAATCGCAAAATCGCAACTCAAGAGGTACTTC...GGCCACCACTTGCCACAGCTTACCAAAATTTCCCCGTACAGGCCACCACTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 90 bp CTCTATTTCCCTCTCATGAGATGCTTTGAGGGACGCAATGTGCGCTaGAGCGTCGTCCTTGACCCTTTTCATGGAGTTTTCAAGTTGGCA +
Preference number: 5 (lower is better)
Translates to: LYFPLMRCFEGRNVR*SVVLDPFHGVFKLA
Trigger: TGCCAACTTGAAAACTCCATGAAAAGGGTCAAGGACGACGCTGCAGCGCACATTGCGTCCCTCAAAGCATCTCATGAGAGGGAAATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 90 bp TTCAGTGTCACCACTGCTTTGTCCATAAGGAACACCTGTTTCTGCTaGTCCGTCGTCTGTTATTTCTGGAGGGGCCTTTGCTTTAGGGGT +
Preference number: 5 (lower is better)
Translates to: FSVTTALSIRNTCFC*SVVCYFWRGLCFRG
Trigger: ACCCCTAAAGCAAAGGCCCCTCCAGAAATAACAGACGACGGACCAGCAGAAACAGGTGTTCCTTATGGACAAAGCAGTGGTGACACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp TCCGGATCTGTCAGCCTATCTGTGACTGATCTGAGCTCGTGCCTGGAGTGTGTGCAGAGCTTGTTTGTCTaGCTTCAGTCTTTTGATGTC +
Preference number: 5 (lower is better)
Translates to: SGSVSLSVTDLSSCLECVQSLFV*LQSFDV
Trigger: GACATCAAAAGACTGAAGCAAGACAAACAAGCTCTG...CACACACTCCAGGCACGAGCTCAGATCAGTCACAGATAGGCTGACAGATCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 90 bp TGCTCCATCAGTGCTTGTGCACCCGTCCATTTTTCCTCCGCATCCTaGGCTCTTTTCAACATTAGTAACTCTTTCTCTCTGTTCCCACCG +
Preference number: 5 (lower is better)
Translates to: CSISACAPVHFSSAS*ALFNISNSFSLFPP
Trigger: CGGTGGGAACAGAGAGAAAGAGTTACTAATGTTGAAAAGAGCTCAGGATGCGGAGGAAAAATGGACGGGTGCACAAGCACTGATGGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 90 bp TATTGCATTTTGGCAAAGGAGTTTCTCTATTTCCCTCTCATGAGATaGTTTGAGGGACGCAATGTGCGCTGCAGCGTCGTCCTTGACCCT +
Preference number: 5 (lower is better)
Translates to: YCILAKEFLYFPLMR*FEGRNVRCSVVLDP
Trigger: AGGGTCAAGGACGACGCTGCAGCGCACATTGCGTCCCTCAAAGCATCTCATGAGAGGGAAATAGAGAAACTCCTTTGCCAAAATGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 90 bp TCCATAAGGAACACCTGTTTCTGCTGGTCCGTCGTCTGTTATTTCTaGAGGGGCCTTTGCTTTAGGGGTTGCTTTCTCTTGACTGCTAAG +
Preference number: 5 (lower is better)
Translates to: SIRNTCFCWSVVCYF*RGLCFRGCFLLTAK
Trigger: CTTAGCAGTCAAGAGAAAGCAACCCCTAAAGCAAAGGCCCCTCCAGAAATAACAGACGACGGACCAGCAGAAACAGGTGTTCCTTATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 90 bp TGCGCTGCAGCGTCGTCCTTGACCCTTTTCATGGAGTTTTCAAGTTaGCATACTGCTGCCTCAGATTCCATCTTCAGCTTACTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: CAAASSLTLFMEFSS*HTAASDSIFSLLLS
Trigger: AGAGAGAAGTAAGCTGAAGATGGAATCTGAGGCAGCAGTATGCCAACTTGAAAACTCCATGAAAAGGGTCAAGGACGACGCTGCAGCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp GGTGGTGTGGAGCGAGATGAGGTCAGTTGCTGCTACTGTATAAATATATCTCTTCAAGAGCTCTTTCCTTaGAGCGCAGCCTCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: GGVERDEVSCCYCINISLQELFP*SAASAE
Trigger: CTCAGCAGAGGCTGCGCTCAAAGGAAAGAGCTCTTG...AAGAGATATATTTATACAGTAGCAGCAACTGACCTCATCTCGCTCCACACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp CGTGCTGTCTGGAGCTCAGGCGTCTTCACATCACTGCTTCTTTCTTCCACACAGTACTACTTGGCGTGTTaGCTGTATTATCTGTTGGAG +
Preference number: 5 (lower is better)
Translates to: RAVWSSGVFTSLLLSSTQYYLAC*LYYLLE
Trigger: CTCCAACAGATAATACAGCAAACACGCCAAGTAGTA...CTGTGTGGAAGAAAGAAGCAGTGATGTGAAGACGCCTGAGCTCCAGACAGCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 90 bp ATCTGTTGGAGCTCCTGCTCTCTCTGCCTATGCCTCATCTCCATCTaGTTGATCTTCCTTTCTAAGCCCATGAAATGCTTCATCTCTGGT +
Preference number: 5 (lower is better)
Translates to: ICWSSCSLCLCLISI*LIFLSKPMKCFISG
Trigger: ACCAGAGATGAAGCATTTCATGGGCTTAGAAAGGAAGATCAAGCAGATGGAGATGAGGCATAGGCAGAGAGAGCAGGAGCTCCAACAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp GATAAACGAGCCTTAGTGCAGGCTATGGCAGCCTTGGAAGCTGGAACATCCCCCGCTGATATGTCTTCTTaGTCTTCAAATAGCTCACAT +
Preference number: 5 (lower is better)
Translates to: DKRALVQAMAALEAGTSPADMSS*SSNSSH
Trigger: ATGTGAGCTATTTGAAGACAAAGAAGACATATCAGC...GGGGGATGTTCCAGCTTCCAAGGCTGCCATAGCCTGCACTAAGGCTCGTTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp GGTGGTGTGGAGCGAGATGAGGTCAGTTGCTGCTACTGTATAAATATATCTCTTGGAGCTCCTGACAGTTaGCACAGTGCTAGCCTCAAT +
Preference number: 5 (lower is better)
Translates to: GGVERDEVSCCYCINISLGAPDS*HSASLN
Trigger: ATTGAGGCTAGCACTGTGCAAACTGTCAGGAGCTCC...AAGAGATATATTTATACAGTAGCAGCAACTGACCTCATCTCGCTCCACACCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 90 bp GCCGCTGTTCGTACTGAATCTTCATTTTCTGAAACTGCTGTTCCATaGTGCGAAGGCTTTTCTTGGCTTCTTCATCTTTGCCCTCCAGAT +
Preference number: 5 (lower is better)
Translates to: AAVRTESSFSETAVP*CEGFSWLLHLCPPD
Trigger: ATCTGGAGGGCAAAGATGAAGAAGCCAAGAAAAGCCTTCGCACCATGGAACAGCAGTTTCAGAAAATGAAGATTCAGTACGAACAGCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp ATGAACAACACCCGTGTGGAGATTACAACTGCAAAGCAATGGCTGGAGATCATCGTCTACCTCCAGAGCTaGTTTGTCTTGCTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: MNNTRVEITTAKQWLEIIVYLQS*FVLLQS
Trigger: AGACTGAAGCAAGACAAACAAGCTCTGGAGGTAGAC...GATGATCTCCAGCCATTGCTTTGCAGTTGTAATCTCCACACGGGTGTTGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp CAGAGACTGTCCTCAGCACGAGGCTCTCATCCATCTATCTGTTTCATGAGAAAGAAAGCAGGCAAAGAGTaGGGATACCTTCTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: QRLSSARGSHPSICFMRKKAGKE*GYLLFR
Trigger: TCTGAAGAGAAGGTATCCCAACTCTTTGCCTGCTTT...CTTTCTCATGAAACAGATAGATGGATGAGAGCCTCGTGCTGAGGACAGTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp ATGTGTAAGCTGCCTGCCAAGTTAGATTATTCTTGTGATCCGGATCTGTCAGCCTCCCATGTCCTCTGTTaGGGTCTTTCTTCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: MCKLPAKLDYSCDPDLSASHVLC*GLSSAF
Trigger: AAAGGCTGAAGAAAGACCCAAACAGAGGACATGGGA...GGCTGACAGATCCGGATCACAAGAATAATCTAACTTGGCAGGCAGCTTACACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 90 bp TCGGACTCGGTGGTAGAGACGTTCTTTGAAGACTCTTCGTTTTCTTaGAGACCATCTTTTATGGAGCTCCTGACAGTTTGCACAGTGCTA +
Preference number: 5 (lower is better)
Translates to: SDSVVETFFEDSSFS*RPSFMELLTVCTVL
Trigger: TAGCACTGTGCAAACTGTCAGGAGCTCCATAAAAGATGGTCTTCAAGAAAACGAAGAGTCTTCAAAGAACGTCTCTACCACCGAGTCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 90 bp CTCTCATCGTGTTTGTGGGGAAATTGGATCGCATGTCTAGTGTCTTaGGACACAGTGTTTGTGTTTGTCTTCAGGGGTAAAGAGCCTACA +
Preference number: 5 (lower is better)
Translates to: LSSCLWGNWIACLVS*DTVFVFVFRGKEPT
Trigger: TGTAGGCTCTTTACCCCTGAAGACAAACACAAACACTGTGTCTCAAGACACTAGACATGCGATCCAATTTCCCCACAAACACGATGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 90 bp GCTGTTCGTACTGAATCTTCATTTTCTGAAACTGCTGTTCCATGGTaGGAAGGCTTTTCTTGGCTTCTTCATCTTTGCCCTCCAGATCAG +
Preference number: 5 (lower is better)
Translates to: AVRTESSFSETAVPW*EGFSWLLHLCPPDQ
Trigger: CTGATCTGGAGGGCAAAGATGAAGAAGCCAAGAAAAGCCTTCGCACCATGGAACAGCAGTTTCAGAAAATGAAGATTCAGTACGAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp TTGGCTTCAGTTGGTCATGAGAAATCCTATGATATACCCCAGAATTACCCGGACCATGGAGTTTTCAAGTaGGCATACTGCTGCCTCAGA +
Preference number: 5 (lower is better)
Translates to: LASVGHEKSYDIPQNYPDHGVFK*AYCCLR
Trigger: TCTGAGGCAGCAGTATGCCAACTTGAAAACTCCATG...GTCCGGGTAATTCTGGGGTATATCATAGGATTTCTCATGACCAACTGAAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp GATGGATCTGAAGGTGGTGTGGGAGTAGTTTATGTTGAAGGAAATCAACCCCAATTGCTGTATTATCTGTaGGAGCTCCTGCTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: DGSEGGVGVVYVEGNQPQLLYYL*ELLLSL
Trigger: CAGAGAGAGCAGGAGCTCCAACAGATAATACAGCAA...TTGGGGTTGATTTCCTTCAACATAAACTACTCCCACACCACCTTCAGATCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 90 bp TGTTTGAGAACATCTATTTCAGCTTCCAGCTTTCTTACAGTGATCTaGTGGGCTTCCTTTATGTCCCCAAGTTCTGTCTCAAGGGCCTTC +
Preference number: 5 (lower is better)
Translates to: CLRTSISASSFLTVI*WASFMSPSSVSRAF
Trigger: GAAGGCCCTTGAGACAGAACTTGGGGACATAAAGGAAGCCCATCAGATCACTGTAAGAAAGCTGGAAGCTGAAATAGATGTTCTCAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp TGCATTACTCATATGCCAGGAATGTGTGTAACCTCTGTTCAGTATCAGAATTTTGAGCTCTCTCTCCTGTaGCCTCTTGAGGCTTTCCAC +
Preference number: 5 (lower is better)
Translates to: CITHMPGMCVTSVQYQNFELSLL*PLEAFH
Trigger: GTGGAAAGCCTCAAGAGGCAACAGGAGAGAGAGCTC...AAAATTCTGATACTGAACAGAGGTTACACACATTCCTGGCATATGAGTAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp TTCAGTATCAGAATTTTTCCAGAGCTGCAAATCTGTCACATGCAATTGGTGCGATTCCTGCTGGTAGCCTaGAAGAAGTGTCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: FSIRIFPELQICHMQLVRFLLVA*KKCLLL
Trigger: GAGCAAGAGACACTTCTTCAAGGCTACCAGCAGGAA...TCGCACCAATTGCATGTGACAGATTTGCAGCTCTGGAAAAATTCTGATACTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp ATGTGTAAGCTGCCTGCCAAGTTAGATTATTCTTGTGATCCGGATCTGTCAGCCGATTTCTTCTCGAACTaGAGAAACTGCAAGGGATTC +
Preference number: 5 (lower is better)
Translates to: MCKLPAKLDYSCDPDLSADFFSN*RNCKGF
Trigger: GAATCCCTTGCAGTTTCTCAAGTTCGAGAAGAAATC...GGCTGACAGATCCGGATCACAAGAATAATCTAACTTGGCAGGCAGCTTACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp CAGAGACTGTCCTCAGCACGAGGCTCTCATCCATCTATCTGTTTCATGAGAAAGAGACTCTTCGTTTTCTaGAAGACCATCTTTTATGGA +
Preference number: 5 (lower is better)
Translates to: QRLSSARGSHPSICFMRKRLFVF*KTIFYG
Trigger: TCCATAAAAGATGGTCTTCAAGAAAACGAAGAGTCT...CTTTCTCATGAAACAGATAGATGGATGAGAGCCTCGTGCTGAGGACAGTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp TTTGGTAAACAACCTGATGTAAAACAGATTGAGGTACTTGCCTCCACTAATTGGTGTGGCATAGGCGATTaGATCTTTGGCTTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: FGKQPDVKQIEVLASTNWCGIGD*IFGLVP
Trigger: AGGGACCAAGCCAAAGATCAAATCGCCTATGCCACA...CCAATTAGTGGAGGCAAGTACCTCAATCTGTTTTACATCAGGTTGTTTACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp GGAACAGTTAATATTTGCTTCCTGCATTACTCATATGCCAGGAATGTGTGTAACGGTCTTTGTAAGGTCTaGTATCTCTCTCCCCTTCGC +
Preference number: 5 (lower is better)
Translates to: GTVNICFLHYSYARNVCNGLCKV*YLSPLR
Trigger: GCGAAGGGGAGAGAGATACAAGACCTTACAAAGACC...GTTACACACATTCCTGGCATATGAGTAATGCAGGAAGCAAATATTAACTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp ATGAACAACACCCGTGTGGAGATTACAACTGCAAAGCAATGGCTGGAGATCATCCTCAACTTCCTTGTTTaGCTCTGTTTCTACTACTTG +
Preference number: 5 (lower is better)
Translates to: MNNTRVEITTAKQWLEIILNFLV*LCFYYL
Trigger: CAAGTAGTAGAAACAGAGCAAAACAAGGAAGTTGAG...GATGATCTCCAGCCATTGCTTTGCAGTTGTAATCTCCACACGGGTGTTGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp GATGGATCTGAAGGTGGTGTGGGAGTAGTTTATGTTGAAGGAAATCAACCCCAAATCTCCAGATACATTTaGTCCAAATGCTCCTCTGTA +
Preference number: 5 (lower is better)
Translates to: DGSEGGVGVVYVEGNQPQISRYI*SKCSSV
Trigger: TACAGAGGAGCATTTGGACAAAATGTATCTGGAGAT...TTGGGGTTGATTTCCTTCAACATAAACTACTCCCACACCACCTTCAGATCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 90 bp TGTTTGGGAAAGCTGTCTTTTCCTGACTCAGAGTTTTCTTTGGGATaGGTCTCTTCATCTTTAGTAATCAAAGGATCATCAGCATCCTCA +
Preference number: 5 (lower is better)
Translates to: CLGKLSFPDSEFSLG*VSSSLVIKGSSASS
Trigger: TGAGGATGCTGATGATCCTTTGATTACTAAAGATGAAGAGACCCATCCCAAAGAAAACTCTGAGTCAGGAAAAGACAGCTTTCCCAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp GGTGGTGTGGAGCGAGATGAGGTCAGTTGCTGCTACTGTATAAATATATCTCTTTCAAATAGCTCACATTaGTTCCAAGCAATCCATCAT +
Preference number: 5 (lower is better)
Translates to: GGVERDEVSCCYCINISLSNSSH*FQAIHH
Trigger: ATGATGGATTGCTTGGAACAAATGTGAGCTATTTGA...AAGAGATATATTTATACAGTAGCAGCAACTGACCTCATCTCGCTCCACACCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp TTCAGTATCAGAATTTTTCCAGAGCTGCAAATCTGTCACATGCAATTGGTGCGAGGTGTGTGGTTTTCTTaGGCTTCTTTCAATTCTTCC +
Preference number: 5 (lower is better)
Translates to: FSIRIFPELQICHMQLVRGVWFS*ASFNSS
Trigger: GGAAGAATTGAAAGAAGCCAAAGAAAACCACACACC...TCGCACCAATTGCATGTGACAGATTTGCAGCTCTGGAAAAATTCTGATACTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS-3UTR CAA 90 bp AACATTCTACTTTGCAAGTATTATTTCAGGACTGCATTTGCTGGCACGGGCAGTCTCTGTTTCTACTACTaGGCGTGTTTGCTGTATTAT +
Preference number: 5 (lower is better)
Translates to: NILLCKYYFRTAFAGTGSLCFYY*ACLLYY
Trigger: ATAATACAGCAAACACGCCAAGTAGTAGAAACAGAG...ACTGCCCGTGCCAGCAAATGCAGTCCTGAAATAATACTTGCAAAGTAGAATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 90 bp TCCAAGAGTTTTGTAATCTGTTTCTGTAGGATTTCTTCTCGAACTTaGGAAACTGCAAGGGATTCCTGTTTACCCTGCAGCTCATTAACT +
Preference number: 5 (lower is better)
Translates to: SKSFVICFCRISSRT*ETARDSCLPCSSLT
Trigger: AGTTAATGAGCTGCAGGGTAAACAGGAATCCCTTGCAGTTTCTCAAGTTCGAGAAGAAATCCTACAGAAACAGATTACAAAACTCTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp AGGGCCTTCAGCCTGGATGAGCTGTTACGCTGGCTCTaGGGAGCTTCCTTCTGCCTGTGGGCAAGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: RAFSLDELLRWL*GASFCLWASSC
Trigger: ACAGCTGCTTGCCCACAGGCAGAAGGAAGCTCCGCAGAGCCAGCGTAACAGCTCATCCAGGCTGAAGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 72 bp GTCTCAAGGGCCTTCAGCCTGGATGAGCTGTTACGCTaGCTCTGCGGAGCTTCCTTCTGCCTGTGGGCAAGC +
Preference number: 6 (lower is better)
Translates to: VSRAFSLDELLR*LCGASFCLWAS
Trigger: GCTTGCCCACAGGCAGAAGGAAGCTCCGCAGAGCCAGCGTAACAGCTCATCCAGGCTGAAGGCCCTTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 72 bp CCCCTTGTCGGTGCAGCTCCCTCAGAACGTCCAGTATaGAGTCCAGCTCTGTGCGGAACTTGTCCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: PLVGAAPSERPV*SPALCGTCPAP
Trigger: GGGAGCTGGACAAGTTCCGCACAGAGCTGGACTCCATACTGGACGTTCTGAGGGAGCTGCACCGACAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 90 bp TGCTGTGTTCTCTTCGCCTGCGAGAGCCATGGGGACCACAACCCCTaGTCGGTGCAGCTCCCTCAGAACGTCCAGTATGGAGTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: CCVLFACESHGDHNP*SVQLPQNVQYGVQL
Trigger: GAGCTGGACTCCATACTGGACGTTCTGAGGGAGCTGCACCGACAAGGGGTTGTGGTCCCCATGGCTCTCGCAGGCGAAGAGAACACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 72 bp GTCCCCAAGTTCTGTCTCAAGGGCCTTCAGCCTGGATaGGCTGTTACGCTGGCTCTGCGGAGCTTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: VPKFCLKGLQPG*AVTLALRSFLL
Trigger: CAGAAGGAAGCTCCGCAGAGCCAGCGTAACAGCTCATCCAGGCTGAAGGCCCTTGAGACAGAACTTGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 72 bp CTTGTATCTCTCTCCCCTTCGCTGCCAGCTCTTCATTaGGTCTCGCCAGTTTTGCCCTGGCCTGCGCCTGCT +
Preference number: 6 (lower is better)
Translates to: LVSLSPSLPALH*VSPVLPWPAPA
Trigger: AGCAGGCGCAGGCCAGGGCAAAACTGGCGAGACTCAATGAAGAGCTGGCAGCGAAGGGGAGAGAGATACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp CTTTTGGCAGCCGTCTCCTCTCTGCTCCTGGGGATCTaGCTCGACAGCATCATCCTTCTCTCCTTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: LLAAVSSLLLGI*LDSIILLSFWS
Trigger: GCTCCAGAAGGAGAGAAGGATGATGCTGTCGAGGCAGATCCCCAGGAGCAGAGAGGAGACGGCTGCCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 72 bp TCTTGTATCTCTCTCCCCTTCGCTGCCAGCTCTTCATaGAGTCTCGCCAGTTTTGCCCTGGCCTGCGCCTGC +
Preference number: 6 (lower is better)
Translates to: SCISLPFAASSS*SLASFALACAC
Trigger: GCAGGCGCAGGCCAGGGCAAAACTGGCGAGACTCAATGAAGAGCTGGCAGCGAAGGGGAGAGAGATACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 90 bp GGGAAAGCATTCCCATGTCCTCTGTTTGGGTCTTTCTTCAGCCTTTaGGCAGCCGTCTCCTCTCTGCTCCTGGGGATCTGCCTCGACAGC +
Preference number: 6 (lower is better)
Translates to: GKAFPCPLFGSFFSL*AAVSSLLLGICLDS
Trigger: GCTGTCGAGGCAGATCCCCAGGAGCAGAGAGGAGACGGCTGCCAAAAGGCTGAAGAAAGACCCAAACAGAGGACATGGGAATGCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 72 bp TGCTTCTGGCCTTCTTACATGGAACCTGTTTACCAATaGCAGGCACCTCTTCCCCAGCCCCGAGCTGGGACC +
Preference number: 6 (lower is better)
Translates to: CFWPSYMEPVYQ*QAPLPQPRAGT
Trigger: GGTCCCAGCTCGGGGCTGGGGAAGAGGTGCCTGTCATTGGTAAACAGGTTCCATGTAAGAAGGCCAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp GGTCTTTCTTCAGCCTTTTGGCAGCCGTCTCCTCTCTaGTCCTGGGGATCTGCCTCGACAGCATCATCCTTC +
Preference number: 6 (lower is better)
Translates to: GLSSAFWQPSPL*SWGSASTASSF
Trigger: GAAGGATGATGCTGTCGAGGCAGATCCCCAGGAGCAGAGAGGAGACGGCTGCCAAAAGGCTGAAGAAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 72 bp TCCCATGTCCTCTGTTTGGGTCTTTCTTCAGCCTTTTaGCAGCCGTCTCCTCTCTGCTCCTGGGGATCTGCC +
Preference number: 6 (lower is better)
Translates to: SHVLCLGLSSAF*QPSPLCSWGSA
Trigger: GGCAGATCCCCAGGAGCAGAGAGGAGACGGCTGCCAAAAGGCTGAAGAAAGACCCAAACAGAGGACATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 72 bp TTATGTCCCCAAGTTCTGTCTCAAGGGCCTTCAGCCTaGATGAGCTGTTACGCTGGCTCTGCGGAGCTTCCT +
Preference number: 6 (lower is better)
Translates to: LCPQVLSQGPSA*MSCYAGSAELP
Trigger: AGGAAGCTCCGCAGAGCCAGCGTAACAGCTCATCCAGGCTGAAGGCCCTTGAGACAGAACTTGGGGACATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 72 bp TCAGGTCTCTTGGGTGTAGCTGGGCTACCTTCACGGTaGGGGGATGGTTTATTCGAAGCTGCAGGCTTGATG +
Preference number: 6 (lower is better)
Translates to: SGLLGVAGLPSR*GDGLFEAAGLM
Trigger: CATCAAGCCTGCAGCTTCGAATAAACCATCCCCTCACCGTGAAGGTAGCCCAGCTACACCCAAGAGACCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp CAAGGGCTGAAAATAACTGGAGTGGTGAACTGGGTTTaGCGTAGCCTGAGCTCCGAGCTGATGCGTACAGTC +
Preference number: 6 (lower is better)
Translates to: QGLKITGVVNWV*RSLSSELMRTV
Trigger: GACTGTACGCATCAGCTCGGAGCTCAGGCTACGGCAAACCCAGTTCACCACTCCAGTTATTTTCAGCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp GCTCCCTCAGAACGTCCAGTATGGAGTCCAGCTCTGTaGGGAACTTGTCCAGCTCCCGATTCTTTAACTGTG +
Preference number: 6 (lower is better)
Translates to: APSERPVWSPAL*GTCPAPDSLTV
Trigger: CACAGTTAAAGAATCGGGAGCTGGACAAGTTCCGCACAGAGCTGGACTCCATACTGGACGTTCTGAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 90 bp GTTTGCCATCCAGGGTTTCAGGGAAAGCATTCCCATGTCCTCTGTTaGGGTCTTTCTTCAGCCTTTTGGCAGCCGTCTCCTCTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: VCHPGFQGKHSHVLC*GLSSAFWQPSPLCS
Trigger: GGAGCAGAGAGGAGACGGCTGCCAAAAGGCTGAAGAAAGACCCAAACAGAGGACATGGGAATGCTTTCCCTGAAACCCTGGATGGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp TGCTGGTCCGTCGTCTGTTATTTCTGGAGGGGCCTTTaGTTTAGGGGTTGCTTTCTCTTGACTGCTAAGGCC +
Preference number: 6 (lower is better)
Translates to: CWSVVCYFWRGL*FRGCFLLTAKA
Trigger: GGCCTTAGCAGTCAAGAGAAAGCAACCCCTAAAGCAAAGGCCCCTCCAGAAATAACAGACGACGGACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp CCTCTCATGAGATGCTTTGAGGGACGCAATGTGCGCTaGAGCGTCGTCCTTGACCCTTTTCATGGAGTTTTC +
Preference number: 6 (lower is better)
Translates to: PLMRCFEGRNVR*SVVLDPFHGVF
Trigger: GAAAACTCCATGAAAAGGGTCAAGGACGACGCTGCAGCGCACATTGCGTCCCTCAAAGCATCTCATGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 72 bp CTCCAGATACATTTTGTCCAAATGCTCCTCTGTAGCTaGACAGCTGCTGCCCATGCCCTCATCTGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: LQIHFVQMLLCS*TAAAHALICCP
Trigger: AGGACAGCAGATGAGGGCATGGGCAGCAGCTGTCCAGCTACAGAGGAGCATTTGGACAAAATGTATCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 72 bp CTCCTTCTGGAGCCTCTCCACGGTCTTTGTAAGGTCTaGTATCTCTCTCCCCTTCGCTGCCAGCTCTTCATT +
Preference number: 6 (lower is better)
Translates to: LLLEPLHGLCKV*YLSPLRCQLFI
Trigger: AATGAAGAGCTGGCAGCGAAGGGGAGAGAGATACAAGACCTTACAAAGACCGTGGAGAGGCTCCAGAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 72 bp CCAGGGTTTCAGGGAAAGCATTCCCATGTCCTCTGTTaGGGTCTTTCTTCAGCCTTTTGGCAGCCGTCTCCT +
Preference number: 6 (lower is better)
Translates to: PGFQGKHSHVLC*GLSSAFWQPSP
Trigger: AGGAGACGGCTGCCAAAAGGCTGAAGAAAGACCCAAACAGAGGACATGGGAATGCTTTCCCTGAAACCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 90 bp TGGTTCGCCTGTGTCTCCCAGAGAATGAGCTACATGACAGTAAGCTaGGTGCAGGGCTTCAGTGTCACCACTGCTTTGTCCATAAGGAAC +
Preference number: 6 (lower is better)
Translates to: WFACVSQRMSYMTVS*VQGFSVTTALSIRN
Trigger: GTTCCTTATGGACAAAGCAGTGGTGACACTGAAGCCCTGCACCAAGCTTACTGTCATGTAGCTCATTCTCTGGGAGACACAGGCGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 72 bp GCATCAAGAGCTCTTTCCTTTGAGCGCAGCCTCTGCTaGGTAGCTGGGCTCCCAGACTCAGTTTTCAGTTTT +
Preference number: 6 (lower is better)
Translates to: ASRALSFERSLC*VAGLPDSVFSF
Trigger: AAAACTGAAAACTGAGTCTGGGAGCCCAGCTACTCAGCAGAGGCTGCGCTCAAAGGAAAGAGCTCTTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp GTCACCACTGCTTTGTCCATAAGGAACACCTGTTTCTaGTGGTCCGTCGTCTGTTATTTCTGGAGGGGCCTT +
Preference number: 6 (lower is better)
Translates to: VTTALSIRNTCF*WSVVCYFWRGL
Trigger: AAGGCCCCTCCAGAAATAACAGACGACGGACCAGCAGAAACAGGTGTTCCTTATGGACAAAGCAGTGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp GGTCTTTGTAAGGTCTTGTATCTCTCTCCCCTTCGCTaGCAGCTCTTCATTGAGTCTCGCCAGTTTTGCCCT +
Preference number: 6 (lower is better)
Translates to: GLCKVLYLSPLR*QLFIESRQFCP
Trigger: AGGGCAAAACTGGCGAGACTCAATGAAGAGCTGGCAGCGAAGGGGAGAGAGATACAAGACCTTACAAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp TTGGCAAAGGAGTTTCTCTATTTCCCTCTCATGAGATaGTTTGAGGGACGCAATGTGCGCTGCAGCGTCGTC +
Preference number: 6 (lower is better)
Translates to: LAKEFLYFPLMR*FEGRNVRCSVV
Trigger: GACGACGCTGCAGCGCACATTGCGTCCCTCAAAGCATCTCATGAGAGGGAAATAGAGAAACTCCTTTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 72 bp ACCACTGCTTTGTCCATAAGGAACACCTGTTTCTGCTaGTCCGTCGTCTGTTATTTCTGGAGGGGCCTTTGC +
Preference number: 6 (lower is better)
Translates to: TTALSIRNTCFC*SVVCYFWRGLC
Trigger: GCAAAGGCCCCTCCAGAAATAACAGACGACGGACCAGCAGAAACAGGTGTTCCTTATGGACAAAGCAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 72 bp CTTGGGTGTAGCTGGGCTACCTTCACGGTGAGGGGATaGTTTATTCGAAGCTGCAGGCTTGATGAGTTTTGT +
Preference number: 6 (lower is better)
Translates to: LGCSWATFTVRG*FIRSCRLDEFC
Trigger: ACAAAACTCATCAAGCCTGCAGCTTCGAATAAACCATCCCCTCACCGTGAAGGTAGCCCAGCTACACCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 72 bp TGTGTCTCCCAGAGAATGAGCTACATGACAGTAAGCTaGGTGCAGGGCTTCAGTGTCACCACTGCTTTGTCC +
Preference number: 6 (lower is better)
Translates to: CVSQRMSYMTVS*VQGFSVTTALS
Trigger: GGACAAAGCAGTGGTGACACTGAAGCCCTGCACCAAGCTTACTGTCATGTAGCTCATTCTCTGGGAGACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 72 bp TGGTTCAGTCTGAAGAGCTCTCTCTCCTGTTGCCTCTaGAGGCTTTCCACTGTGTTCTCCAGTTCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: WFSLKSSLSCCL*RLSTVFSSSFS
Trigger: GGAGAAGGAACTGGAGAACACAGTGGAAAGCCTCAAGAGGCAACAGGAGAGAGAGCTCTTCAGACTGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 72 bp GCTTTGAGGGACGCAATGTGCGCTGCAGCGTCGTCCTaGACCCTTTTCATGGAGTTTTCAAGTTGGCATACT +
Preference number: 6 (lower is better)
Translates to: ALRDAMCAAASS*TLFMEFSSWHT
Trigger: AGTATGCCAACTTGAAAACTCCATGAAAAGGGTCAAGGACGACGCTGCAGCGCACATTGCGTCCCTCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 90 bp GTGCGCTGCAGCGTCGTCCTTGACCCTTTTCATGGAGTTTTCAAGTaGGCATACTGCTGCCTCAGATTCCATCTTCAGCTTACTTCTCTC +
Preference number: 6 (lower is better)
Translates to: VRCSVVLDPFHGVFK*AYCCLRFHLQLTSL
Trigger: GAGAGAAGTAAGCTGAAGATGGAATCTGAGGCAGCAGTATGCCAACTTGAAAACTCCATGAAAAGGGTCAAGGACGACGCTGCAGCGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 90 bp AGCTCCCTCAGAACGTCCAGTATGGAGTCCAGCTCTGTGCGGAACTaGTCCAGCTCCCGATTCTTTAACTGTGCAAGTCTTTTCCATTTC +
Preference number: 6 (lower is better)
Translates to: SSLRTSSMESSSVRN*SSSRFFNCASLFHF
Trigger: GAAATGGAAAAGACTTGCACAGTTAAAGAATCGGGAGCTGGACAAGTTCCGCACAGAGCTGGACTCCATACTGGACGTTCTGAGGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp TTCTCTTGGTTCAGTCTGAAGAGCTCTCTCTCCTGTTaGCTCTTGAGGCTTTCCACTGTGTTCTCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: FSWFSLKSSLSC*LLRLSTVFSSS
Trigger: GGAACTGGAGAACACAGTGGAAAGCCTCAAGAGGCAACAGGAGAGAGAGCTCTTCAGACTGAACCAAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 72 bp AACACCTGTTTCTGCTGGTCCGTCGTCTGTTATTTCTaGAGGGGCCTTTGCTTTAGGGGTTGCTTTCTCTTG +
Preference number: 6 (lower is better)
Translates to: NTCFCWSVVCYF*RGLCFRGCFLL
Trigger: CAAGAGAAAGCAACCCCTAAAGCAAAGGCCCCTCCAGAAATAACAGACGACGGACCAGCAGAAACAGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 72 bp AGAACGTCCAGTATGGAGTCCAGCTCTGTGCGGAACTaGTCCAGCTCCCGATTCTTTAACTGTGCAAGTCTT +
Preference number: 6 (lower is better)
Translates to: RTSSMESSSVRN*SSSRFFNCASL
Trigger: AAGACTTGCACAGTTAAAGAATCGGGAGCTGGACAAGTTCCGCACAGAGCTGGACTCCATACTGGACGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 90 bp GTTTTCAGTTTTTCAATCTCTAATCTCAGCTTCTCAGTCTCTTCATaGGCCTCTCGGAGGCGAGCTGCGTCTCTATCCAGAAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: VFSFSISNLSFSVSS*ASRRRAASLSRSSW
Trigger: CCAGGAGCTTCTGGATAGAGACGCAGCTCGCCTCCGAGAGGCCAATGAAGAGACTGAGAAGCTGAGATTAGAGATTGAAAAACTGAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 90 bp GAATCACCAGCTGCCGAGGCAGCCAGTATCAAAGCAGGCAAAGAGTaGGGATACCTTCTCTTCAGAATCCCTTCCATTTCTTTAACCTGC +
Preference number: 6 (lower is better)
Translates to: ESPAAEAASIKAGKE*GYLLFRIPSISLTC
Trigger: GCAGGTTAAAGAAATGGAAGGGATTCTGAAGAGAAGGTATCCCAACTCTTTGCCTGCTTTGATACTGGCTGCCTCGGCAGCTGGTGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 90 bp TGTTGGAGCTCCTGCTCTCTCTGCCTATGCCTCATCTCCATCTGCTaGATCTTCCTTTCTAAGCCCATGAAATGCTTCATCTCTGGTGTG +
Preference number: 6 (lower is better)
Translates to: CWSSCSLCLCLISIC*IFLSKPMKCFISGV
Trigger: CACACCAGAGATGAAGCATTTCATGGGCTTAGAAAGGAAGATCAAGCAGATGGAGATGAGGCATAGGCAGAGAGAGCAGGAGCTCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 72 bp TCTGGAGGGGCCTTTGCTTTAGGGGTTGCTTTCTCTTaGCTGCTAAGGCCAACATCTTCAACAGAGTCAAAG +
Preference number: 6 (lower is better)
Translates to: SGGAFALGVAFS*LLRPTSSTESK
Trigger: CTTTGACTCTGTTGAAGATGTTGGCCTTAGCAGTCAAGAGAAAGCAACCCCTAAAGCAAAGGCCCCTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp AGCTCCTGCTCTCTCTGCCTATGCCTCATCTCCATCTaGTTGATCTTCCTTTCTAAGCCCATGAAATGCTTC +
Preference number: 6 (lower is better)
Translates to: SSCSLCLCLISI*LIFLSKPMKCF
Trigger: GAAGCATTTCATGGGCTTAGAAAGGAAGATCAAGCAGATGGAGATGAGGCATAGGCAGAGAGAGCAGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 72 bp TTTCAATCTCTAATCTCAGCTTCTCAGTCTCTTCATTaGCCTCTCGGAGGCGAGCTGCGTCTCTATCCAGAA +
Preference number: 6 (lower is better)
Translates to: FQSLISASQSLH*PLGGELRLYPE
Trigger: TTCTGGATAGAGACGCAGCTCGCCTCCGAGAGGCCAATGAAGAGACTGAGAAGCTGAGATTAGAGATTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 72 bp TTTTCAATCTCTAATCTCAGCTTCTCAGTCTCTTCATaGGCCTCTCGGAGGCGAGCTGCGTCTCTATCCAGA +
Preference number: 6 (lower is better)
Translates to: FSISNLSFSVSS*ASRRRAASLSR
Trigger: TCTGGATAGAGACGCAGCTCGCCTCCGAGAGGCCAATGAAGAGACTGAGAAGCTGAGATTAGAGATTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp GTCTGTTATTTCTGGAGGGGCCTTTGCTTTAGGGGTTaGTTTCTCTTGACTGCTAAGGCCAACATCTTCAAC +
Preference number: 6 (lower is better)
Translates to: VCYFWRGLCFRG*FLLTAKANIFN
Trigger: GTTGAAGATGTTGGCCTTAGCAGTCAAGAGAAAGCAACCCCTAAAGCAAAGGCCCCTCCAGAAATAACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp CTTCTCACAGAATGTCATTTTCATTTGCTCCATCAGTaGTTGTGCACCCGTCCATTTTTCCTCCGCATCCTG +
Preference number: 6 (lower is better)
Translates to: LLTECHFHLLHQ*LCTRPFFLRIL
Trigger: CAGGATGCGGAGGAAAAATGGACGGGTGCACAAGCACTGATGGAGCAAATGAAAATGACATTCTGTGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 72 bp TTCTGGAGGGGCCTTTGCTTTAGGGGTTGCTTTCTCTaGACTGCTAAGGCCAACATCTTCAACAGAGTCAAA +
Preference number: 6 (lower is better)
Translates to: FWRGLCFRGCFL*TAKANIFNRVK
Trigger: TTTGACTCTGTTGAAGATGTTGGCCTTAGCAGTCAAGAGAAAGCAACCCCTAAAGCAAAGGCCCCTCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 72 bp AGCGTCGTCCTTGACCCTTTTCATGGAGTTTTCAAGTaGGCATACTGCTGCCTCAGATTCCATCTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: SVVLDPFHGVFK*AYCCLRFHLQL
Trigger: AAGCTGAAGATGGAATCTGAGGCAGCAGTATGCCAACTTGAAAACTCCATGAAAAGGGTCAAGGACGACGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 90 bp GTCTGTTATTTCTGGAGGGGCCTTTGCTTTAGGGGTTGCTTTCTCTaGACTGCTAAGGCCAACATCTTCAACAGAGTCAAAGGAATCAAG +
Preference number: 6 (lower is better)
Translates to: VCYFWRGLCFRGCFL*TAKANIFNRVKGIK
Trigger: CTTGATTCCTTTGACTCTGTTGAAGATGTTGGCCTTAGCAGTCAAGAGAAAGCAACCCCTAAAGCAAAGGCCCCTCCAGAAATAACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 72 bp AGTGCTTGTGCACCCGTCCATTTTTCCTCCGCATCCTaGGCTCTTTTCAACATTAGTAACTCTTTCTCTCTG +
Preference number: 6 (lower is better)
Translates to: SACAPVHFSSAS*ALFNISNSFSL
Trigger: CAGAGAGAAAGAGTTACTAATGTTGAAAAGAGCTCAGGATGCGGAGGAAAAATGGACGGGTGCACAAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 72 bp TTCTTGAAGACCATCTTTTATGGAGCTCCTGACAGTTaGCACAGTGCTAGCCTCAATTCTTGGTTCGCCTGT +
Preference number: 6 (lower is better)
Translates to: FLKTIFYGAPDS*HSASLNSWFAC
Trigger: ACAGGCGAACCAAGAATTGAGGCTAGCACTGTGCAAACTGTCAGGAGCTCCATAAAAGATGGTCTTCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 72 bp ATCCCTTCCATTTCTTTAACCTGCCGCTCCAGATCCTaGATTCTTTTGGCATCAAGAGCTCTTTCCTTTGAG +
Preference number: 6 (lower is better)
Translates to: IPSISLTCRSRS*ILLASRALSFE
Trigger: CTCAAAGGAAAGAGCTCTTGATGCCAAAAGAATTCAGGATCTGGAGCGGCAGGTTAAAGAAATGGAAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp CTTGACCCTTTTCATGGAGTTTTCAAGTTGGCATACTaGTGCCTCAGATTCCATCTTCAGCTTACTTCTCTC +
Preference number: 6 (lower is better)
Translates to: LDPFHGVFKLAY*CLRFHLQLTSL
Trigger: GAGAGAAGTAAGCTGAAGATGGAATCTGAGGCAGCAGTATGCCAACTTGAAAACTCCATGAAAAGGGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 72 bp TTCCTTGTTTTGCTCTGTTTCTACTACTTGGCGTGTTaGCTGTATTATCTGTTGGAGCTCCTGCTCTCTCTG +
Preference number: 6 (lower is better)
Translates to: FLVLLCFYYLAC*LYYLLELLLSL
Trigger: CAGAGAGAGCAGGAGCTCCAACAGATAATACAGCAAACACGCCAAGTAGTAGAAACAGAGCAAAACAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 72 bp GTGGTAGAGACGTTCTTTGAAGACTCTTCGTTTTCTTaGAGACCATCTTTTATGGAGCTCCTGACAGTTTGC +
Preference number: 6 (lower is better)
Translates to: VVETFFEDSSFS*RPSFMELLTVC
Trigger: GCAAACTGTCAGGAGCTCCATAAAAGATGGTCTTCAAGAAAACGAAGAGTCTTCAAAGAACGTCTCTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 72 bp TGTGGGCAAATCGGACTCGGTGGTAGAGACGTTCTTTaGAGACTCTTCGTTTTCTTGAAGACCATCTTTTAT +
Preference number: 6 (lower is better)
Translates to: CGQIGLGGRDVL*RLFVFLKTIFY
Trigger: ATAAAAGATGGTCTTCAAGAAAACGAAGAGTCTTCAAAGAACGTCTCTACCACCGAGTCCGATTTGCCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 72 bp TGTTTGTGGGGAAATTGGATCGCATGTCTAGTGTCTTaGGACACAGTGTTTGTGTTTGTCTTCAGGGGTAAA +
Preference number: 6 (lower is better)
Translates to: CLWGNWIACLVS*DTVFVFVFRGK
Trigger: TTTACCCCTGAAGACAAACACAAACACTGTGTCTCAAGACACTAGACATGCGATCCAATTTCCCCACAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp ACTGAATCTTCATTTTCTGAAACTGCTGTTCCATGGTaGGAAGGCTTTTCTTGGCTTCTTCATCTTTGCCCT +
Preference number: 6 (lower is better)
Translates to: TESSFSETAVPW*EGFSWLLHLCP
Trigger: AGGGCAAAGATGAAGAAGCCAAGAAAAGCCTTCGCACCATGGAACAGCAGTTTCAGAAAATGAAGATTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 72 bp CGTACTGAATCTTCATTTTCTGAAACTGCTGTTCCATaGTGCGAAGGCTTTTCTTGGCTTCTTCATCTTTGC +
Preference number: 6 (lower is better)
Translates to: RTESSFSETAVP*CEGFSWLLHLC
Trigger: GCAAAGATGAAGAAGCCAAGAAAAGCCTTCGCACCATGGAACAGCAGTTTCAGAAAATGAAGATTCAGTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 90 bp TCCTCCTGTTTGGGAAAGCTGTCTTTTCCTGACTCAGAGTTTTCTTaGGGATGGGTCTCTTCATCTTTAGTAATCAAAGGATCATCAGCA +
Preference number: 6 (lower is better)
Translates to: SSCLGKLSFPDSEFS*GWVSSSLVIKGSSA
Trigger: TGCTGATGATCCTTTGATTACTAAAGATGAAGAGACCCATCCCAAAGAAAACTCTGAGTCAGGAAAAGACAGCTTTCCCAAACAGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 72 bp TTTGTAATCTGTTTCTGTAGGATTTCTTCTCGAACTTaGGAAACTGCAAGGGATTCCTGTTTACCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: FVICFCRISSRT*ETARDSCLPCS
Trigger: GCTGCAGGGTAAACAGGAATCCCTTGCAGTTTCTCAAGTTCGAGAAGAAATCCTACAGAAACAGATTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS GCA 72 bp CAGATGTTTCTCCAAATTGTAGCCACCTCTGTTTTCTaGTTGTTTCTTCAAAGCTACTTAACTTGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: QMFLQIVATSVF*LFLQSYLTWPG
Trigger: TCCAGGCCAAGTTAAGTAGCTTTGAAGAAACAAGCAGAAAACAGAGGTGGCTACAATTTGGAGAAACATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 72 bp TTGGGAAAGCTGTCTTTTCCTGACTCAGAGTTTTCTTaGGGATGGGTCTCTTCATCTTTAGTAATCAAAGGA +
Preference number: 6 (lower is better)
Translates to: LGKLSFPDSEFS*GWVSSSLVIKG
Trigger: TCCTTTGATTACTAAAGATGAAGAGACCCATCCCAAAGAAAACTCTGAGTCAGGAAAAGACAGCTTTCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 72 bp CTTGACCTTGGAAATGTTTTAGAAGTACCTCTTGAGTaGCGATTTTGCGATTCAGTTCAGCTACTTTGGAAG +
Preference number: 6 (lower is better)
Translates to: LDLGNVLEVPLE*RFCDSVQLLWK
Trigger: CTTCCAAAGTAGCTGAACTGAATCGCAAAATCGCAACTCAAGAGGTACTTCTAAAACATTTCCAAGGTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CCA 72 bp AAGCTGTCTTTTCCTGACTCAGAGTTTTCTTTGGGATaGGTCTCTTCATCTTTAGTAATCAAAGGATCATCA +
Preference number: 6 (lower is better)
Translates to: KLSFPDSEFSLG*VSSSLVIKGSS
Trigger: TGATGATCCTTTGATTACTAAAGATGAAGAGACCCATCCCAAAGAAAACTCTGAGTCAGGAAAAGACAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS TCA 72 bp CCTTTGTCATTCTTCTTGTGTTCTAAGTCAGCATTTTaGTGTTTGAGAACATCTATTTCAGCTTCCAGCTTT +
Preference number: 6 (lower is better)
Translates to: PLSFFLCSKSAF*CLRTSISASSF
Trigger: AAAGCTGGAAGCTGAAATAGATGTTCTCAAACATCAAAATGCTGACTTAGAACACAAGAAGAATGACAAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6
CDS CAA 72 bp GCTGATATGTCTTCTTTGTCTTCAAATAGCTCACATTaGTTCCAAGCAATCCATCATCTTCAAAATCATCTT +
Preference number: 6 (lower is better)
Translates to: ADMSSLSSNSSH*FQAIHHLQNHL
Trigger: AAGATGATTTTGAAGATGATGGATTGCTTGGAACAAATGTGAGCTATTTGAAGACAAAGAAGACATATCAGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093802.6