RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP131 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039781

Ensembl transcript IDs: ENSMUST00000106227.8, ENSMUST00000106229.8, ENSMUST00000180242.2

Found 444 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCTCTCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTaGAGCGTGACCTGGACACCAGCCGCAGGACTGAGTGTCAGCCTC +
Preference number: 1 (lower is better)
Translates to: CLSHTSCCPTLSPVS*SVTWTPAAGLSVSL
Trigger: GAGGCTGACACTCAGTCCTGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGAGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
3UTR-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGTGTCAGCCTCAGGCTTaGCTCGTCATCCCAAGGGCG +
Preference number: 2 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLCQPQA*LVIPRA
Trigger: CGCCCTTGGGATGACGAGCCAAGCCTGAGGCTGACA...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
3UTR-3UTR CCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACTCTTGGAGCGTGACCTaGACACCAGCCGCAGGACTG +
Preference number: 2 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHSWSVT*TPAAGL
Trigger: CAGTCCTGCGGCTGGTGTCCAGGTCACGCTCCAAGA...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
3UTR-3UTR CCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATGTCAGCCTCAGGCTTaGCTCGTCATCCCAAGGGCG +
Preference number: 2 (lower is better)
Translates to: HADSNVPGTGLHGASHTPCQPQA*LVIPRA
Trigger: CGCCCTTGGGATGACGAGCCAAGCCTGAGGCTGACA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
3UTR-3UTR CCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGTCTTGGAGCGTGACCTaGACACCAGCCGCAGGACTG +
Preference number: 2 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQSWSVT*TPAAGL
Trigger: CAGTCCTGCGGCTGGTGTCCAGGTCACGCTCCAAGA...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
3UTR-3UTR CCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACATCTTGGAGCGTGACCTaGACACCAGCCGCAGGACTG +
Preference number: 2 (lower is better)
Translates to: RHADSNVPGTGLHGASHTSWSVT*TPAAGL
Trigger: CAGTCCTGCGGCTGGTGTCCAGGTCACGCTCCAAGA...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
3UTR-3UTR CAA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGGTGTCAGCCTCAGGCTaGGCTCGTCATCCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLVSASG*ARHPKG
Trigger: GCCCTTGGGATGACGAGCCAAGCCTGAGGCTGACAC...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
3UTR-3UTR CAA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACAGTGTCAGCCTCAGGCTaGGCTCGTCATCCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: RHADSNVPGTGLHGASHTVSASG*ARHPKG
Trigger: GCCCTTGGGATGACGAGCCAAGCCTGAGGCTGACAC...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
3UTR-3UTR CAA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGTGTCAGCCTCAGGCTaGGCTCGTCATCCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPAVSASG*ARHPKG
Trigger: GCCCTTGGGATGACGAGCCAAGCCTGAGGCTGACAC...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
3UTR CCA 72 bp TGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTaGACACCAGCCGCAGGACTGAGTGTCAGCCTCAGG +
Preference number: 3 (lower is better)
Translates to: CPTLSPVSWSVT*TPAAGLSVSLR
Trigger: CCTGAGGCTGACACTCAGTCCTGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
3UTR CCA 72 bp CACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTaGAGCGTGACCTGGACACCAGCCGCAGGACTGAGT +
Preference number: 3 (lower is better)
Translates to: HTSCCPTLSPVS*SVTWTPAAGLS
Trigger: ACTCAGTCCTGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACGCGCGCTCCCGCTCCTaGTGGCCCAGCACCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHARSRS*WPSTSL
Trigger: GAGGGAGGTGCTGGGCCAGCAGGAGCGGGAGCGCGC...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGGCGCGCTCCCGCTCCTaGTGGCCCAGCACCTCCCTC +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQARSRS*WPSTSL
Trigger: GAGGGAGGTGCTGGGCCAGCAGGAGCGGGAGCGCGC...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACAGCACTGCCGGGCCGCTaGGACATGGGCGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTALPGR*DMGGGR
Trigger: CCTCCCTCCGCCCATGTCCCAGCGGCCCGGCAGTGC...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACGTCGGTGGGCTCTGCTaGCCTGGGGGAGCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHVGGLC*PGGARP
Trigger: TGGACGGGCTCCCCCAGGCCAGCAGAGCCCACCGAC...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGGCGCGCTCCCGCTCCTaGTGGCCCAGCACCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWARSRS*WPSTSL
Trigger: GAGGGAGGTGCTGGGCCAGCAGGAGCGGGAGCGCGC...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGTCCAACTCTGCCCGCTaGCTGGCTGCCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLSNSAR*LAACWP
Trigger: GGGCCAGCAGGCAGCCAGGCAGCGGGCAGAGTTGGA...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCAGTCGGTGGGCTCTGCTaGCCTGGGGGAGCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAAVGGLC*PGGARP
Trigger: TGGACGGGCTCCCCCAGGCCAGCAGAGCCCACCGAC...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCGGCGCCTCTGTACCTaGCAGCGGTACCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLRRLCT*QRYQRW
Trigger: CCAGCGCTGGTACCGCTGCCAGGTACAGAGGCGCCG...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCGGCGCCTCTGTACCTaGCAGCGGTACCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHRRLCT*QRYQRW
Trigger: CCAGCGCTGGTACCGCTGCCAGGTACAGAGGCGCCG...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGACTCTGCCCGCTGCCTaGCTGCCTGCTGGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLTLPAA*LPAGPV
Trigger: GACTGGGCCAGCAGGCAGCCAGGCAGCGGGCAGAGT...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCAGCTGCCTGCCTGGCCTaGCGAGCCTTTTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAAAACLA*RAFSSR
Trigger: CCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGC...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCTGCCTGCCTGGCCTaGCGAGCCTTTTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPAAACLA*RAFSSR
Trigger: CCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGC...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCAGAAGTCGGTGGGCTCTaGTGGCCTGGGGGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAAEVGGL*WPGGAR
Trigger: ACGGGCTCCCCCAGGCCAGCAGAGCCCACCGACTTC...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGGAAGTCGGTGGGCTCTaGTGGCCTGGGGGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQEVGGL*WPGGAR
Trigger: ACGGGCTCCCCCAGGCCAGCAGAGCCCACCGACTTC...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCCGGGCCTTCTTCCTTaGTGCCTCCTCCTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHPGLLP*CLLLPV
Trigger: CACCGGCAGGAGGAGGCAGCAAGGAAGAAGGCCCGG...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCCACCGCTGGTCCCCGTaGTTCAGCTCGGCCACCACT +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVHRWSP*FSSATT
Trigger: AGTGGTGGCCGAGCTGAAGCACGGGGACCAGCGGTG...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCTGCAGCTCAGCCTCGTaGAGGCCCCTGAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPACSSAS*RPLSRL
Trigger: GAGGCGGCTCAGGGGCCTGCACGAGGCTGAGCTGCA...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGTGCAGCTCAGCCTCGTaGAGGCCCCTGAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQCSSAS*RPLSRL
Trigger: GAGGCGGCTCAGGGGCCTGCACGAGGCTGAGCTGCA...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCTGCTGCTCAAACCTCTaGTGGGCGCGCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVCCSNL*WARSRS
Trigger: GGAGCGGGAGCGCGCCCAGCAGAGGTTTGAGCAGCA...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGAGTCGCCGCCGCTGCTaGTCCAGTGCCCTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLSRRRC*SSALCS
Trigger: GGAACAGAGGGCACTGGAGCAGCAGCGGCGGCGACT...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACGCTGCCTGGCTGCCTaGTGGCCCAGTCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTRCLAA*WPSRSF
Trigger: GAAGGAGCGACTGGGCCAGCAGGCAGCCAGGCAGCG...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCACGCTGCCTGGCTGCCTaGTGGCCCAGTCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPRCLAA*WPSRSF
Trigger: GAAGGAGCGACTGGGCCAGCAGGCAGCCAGGCAGCG...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCGCTGCCTGGCTGCCTaGTGGCCCAGTCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQRCLAA*WPSRSF
Trigger: GAAGGAGCGACTGGGCCAGCAGGCAGCCAGGCAGCG...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCATCCAACTCTGCCCGCTaGCTGGCTGCCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAASNSAR*LAACWP
Trigger: GGGCCAGCAGGCAGCCAGGCAGCGGGCAGAGTTGGA...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACTGGTGCCTCCGCTCCTaGTCCTCTCGGCTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHWCLRS*SSRLLS
Trigger: CGAGAGGAGCCGAGAGGAGCAGGAGCGGAGGCACCA...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCTGGTGCCTCCGCTCCTaGTCCTCTCGGCTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVWCLRS*SSRLLS
Trigger: CGAGAGGAGCCGAGAGGAGCAGGAGCGGAGGCACCA...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCACGGGCCGCTGGGACATaGGCGGAGGGAGGCCAATCA +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAARAAGT*AEGGQS
Trigger: TGATTGGCCTCCCTCCGCCCATGTCCCAGCGGCCCG...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGGTCGGTGGGCTCTGCTaGCCTGGGGGAGCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWVGGLC*PGGARP
Trigger: TGGACGGGCTCCCCCAGGCCAGCAGAGCCCACCGAC...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGGCATCAGGAAGTCGGTaGGCTCTGCTGGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLASGSR*ALLAWG
Trigger: CCCCCAGGCCAGCAGAGCCCACCGACTTCCTGATGC...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGAGCCTGGCTCCTGCATaGGTCGAGGCTGCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLSLAPA*VEAAPV
Trigger: CACCGGAGCAGCCTCGACCCATGCAGGAGCCAGGCT...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGGTCCGCGGGGCCTGTaGGGTAGATGCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPAGPRGL*GRCWHQ
Trigger: CTGGTGCCAGCATCTACCCCACAGGCCCCGCGGACC...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGGGGTTGCTCTGGCCCTaGCCTTGCCCCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLGLLWP*PCPWKS
Trigger: GCTCTTCCAGGGGCAAGGCCAGGGCCAGAGCAACCC...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCACGTCCAGGGTTGCTCTaGCCCTGGCCTTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAARPGLL*PWPCPW
Trigger: CCAGGGGCAAGGCCAGGGCCAGAGCAACCCTGGACG...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCGTCCAGGGTTGCTCTaGCCCTGGCCTTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQRPGLL*PWPCPW
Trigger: CCAGGGGCAAGGCCAGGGCCAGAGCAACCCTGGACG...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACTGCTGCTCCTGCATCTaGGCCACGCGCTCCCGACAC +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHCCSCI*ATRSRH
Trigger: GTGTCGGGAGCGCGTGGCCCAGATGCAGGAGCAGCA...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCTGCTGCTCCTGCATCTaGGCCACGCGCTCCCGACAC +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVCCSCI*ATRSRH
Trigger: GTGTCGGGAGCGCGTGGCCCAGATGCAGGAGCAGCA...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACTGCTCAAACCTCTGCTaGGCGCGCTCCCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHCSNLC*ARSRSC
Trigger: GCAGGAGCGGGAGCGCGCCCAGCAGAGGTTTGAGCA...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACTGCCTGGCTGCCTGCTaGCCCAGTCGCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHCLAAC*PSRSFS
Trigger: GGAGAAGGAGCGACTGGGCCAGCAGGCAGCCAGGCA...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACAACTCTGCCCGCTGCCTaGCTGCCTGCTGGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTTLPAA*LPAGPV
Trigger: GACTGGGCCAGCAGGCAGCCAGGCAGCGGGCAGAGT...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGACTCTGCCCGCTGCCTaGCTGCCTGCTGGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQTLPAA*LPAGPV
Trigger: GACTGGGCCAGCAGGCAGCCAGGCAGCGGGCAGAGT...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCCACCTGGGCCAGGCTaGCCCGCTCACTGCACATCT +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHPPGPG*PAHCTS
Trigger: AGATGTGCAGTGAGCGGGCCAGCCTGGCCCAGGTGG...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATCCTGCCGTACCACCTaGGCCAGGCTGGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPSCRTT*ARLARS
Trigger: TGAGCGGGCCAGCCTGGCCCAGGTGGTACGGCAGGA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGTCCTGCCGTACCACCTaGGCCAGGCTGGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQSCRTT*ARLARS
Trigger: TGAGCGGGCCAGCCTGGCCCAGGTGGTACGGCAGGA...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGTCTAGCTCCACCTGCTaGCGGGCCTGCAGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLSSSTC*RACSSA
Trigger: CGCAGAGCTGCAGGCCCGCCAGCAGGTGGAGCTAGA...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGGCTGCCTGCCTGGCCTaGCGAGCCTTTTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWAACLA*RAFSSR
Trigger: CCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGC...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCATCCGAGCACCGCTCCTaGAGCTTCCGCTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAASEHRS*SFRSDC
Trigger: GCAGTCGGAGCGGAAGCTTCAGGAGCGGTGCTCGGA...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCTCCGAGCACCGCTCCTaGAGCTTCCGCTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPASEHRS*SFRSDC
Trigger: GCAGTCGGAGCGGAAGCTTCAGGAGCGGTGCTCGGA...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACATTGTGGCAGAGGCACTaGCGGGCCGCTGGGACATGG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTLWQRH*RAAGTW
Trigger: CCATGTCCCAGCGGCCCGGCAGTGCCTCTGCCACAA...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATTGTGGCAGAGGCACTaGCGGGCCGCTGGGACATGG +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPLWQRH*RAAGTW
Trigger: CCATGTCCCAGCGGCCCGGCAGTGCCTCTGCCACAA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGGAAGTCGGTGGGCTCTaGTGGCCTGGGGGAGCCCGT +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWEVGGL*WPGGAR
Trigger: ACGGGCTCCCCCAGGCCAGCAGAGCCCACCGACTTC...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGGGCCTTCTTCCTTGCTaGCTCCTCCTGCCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLGLLPC*LLLPVQ
Trigger: CTGCACCGGCAGGAGGAGGCAGCAAGGAAGAAGGCC...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACGGCCTTCTTCCTTGCTaGCTCCTCCTGCCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHGLLPC*LLLPVQ
Trigger: CTGCACCGGCAGGAGGAGGCAGCAAGGAAGAAGGCC...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCACCGGGCCTTCTTCCTTaGTGCCTCCTCCTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPPGLLP*CLLLPV
Trigger: CACCGGCAGGAGGAGGCAGCAAGGAAGAAGGCCCGG...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCGGGCCTTCTTCCTTaGTGCCTCCTCCTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTPGLLP*CLLLPV
Trigger: CACCGGCAGGAGGAGGCAGCAAGGAAGAAGGCCCGG...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACTACTGCTCCTTCTGCTaGCGCAGCTGCCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHYCSFC*RSCRVS
Trigger: GCTGACCCGGCAGCTGCGGCAGCAGAAGGAGCAGTA...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCACCGCTGGTCCCCGTaGTTCAGCTCGGCCACCACT +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQHRWSP*FSSATT
Trigger: AGTGGTGGCCGAGCTGAAGCACGGGGACCAGCGGTG...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACACCGCTGGTCCCCGTaGTTCAGCTCGGCCACCACT +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTHRWSP*FSSATT
Trigger: AGTGGTGGCCGAGCTGAAGCACGGGGACCAGCGGTG...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGTGCAGCTCAGCCTCGTaGAGGCCCCTGAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWCSSAS*RPLSRL
Trigger: GAGGCGGCTCAGGGGCCTGCACGAGGCTGAGCTGCA...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCAACGCAGGTGGCGCTGTaGGGCCTGCTCTTCACGCTG +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAATQVAL*GLLFTL
Trigger: CAGCGTGAAGAGCAGGCCGCACAGCGCCACCTGCGT...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACAACGCAGGTGGCGCTGTaGGGCCTGCTCTTCACGCTG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTTQVAL*GLLFTL
Trigger: CAGCGTGAAGAGCAGGCCGCACAGCGCCACCTGCGT...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGACGCAGGTGGCGCTGTaGGGCCTGCTCTTCACGCTG +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQTQVAL*GLLFTL
Trigger: CAGCGTGAAGAGCAGGCCGCACAGCGCCACCTGCGT...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATGCTGCTCAAACCTCTaGTGGGCGCGCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPCCSNL*WARSRS
Trigger: GGAGCGGGAGCGCGCCCAGCAGAGGTTTGAGCAGCA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCAGTCGCCGCCGCTGCTaGTCCAGTGCCCTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPASRRRC*SSALCS
Trigger: GGAACAGAGGGCACTGGAGCAGCAGCGGCGGCGACT...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACATGGTGCCTCCGCTCCTaGTCCTCTCGGCTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTWCLRS*SSRLLS
Trigger: CGAGAGGAGCCGAGAGGAGCAGGAGCGGAGGCACCA...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCGCGGGCCTGCAGCTCTaGGAGCTCCACTTTCACCCT +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVAGLQL*ELHFHP
Trigger: AGGGTGAAAGTGGAGCTCGCAGAGCTGCAGGCCCGC...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACTCGTCTAGCTCCACCTaGTGGCGGGCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHSSSST*WRACSS
Trigger: AGAGCTGCAGGCCCGCCAGCAGGTGGAGCTAGACGA...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGCGGGCCGCTGGGACATaGGCGGAGGGAGGCCAATCA +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWRAAGT*AEGGQS
Trigger: TGATTGGCCTCCCTCCGCCCATGTCCCAGCGGCCCG...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGGCATCAGGAAGTCGGTaGGCTCTGCTGGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQASGSR*ALLAWG
Trigger: CCCCCAGGCCAGCAGAGCCCACCGACTTCCTGATGC...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCAAGCCTGGCTCCTGCATaGGTCGAGGCTGCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAASLAPA*VEAAPV
Trigger: CACCGGAGCAGCCTCGACCCATGCAGGAGCCAGGCT...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGGGTCCGCGGGGCCTGTaGGGTAGATGCTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWGPRGL*GRCWHQ
Trigger: CTGGTGCCAGCATCTACCCCACAGGCCCCGCGGACC...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGGGTTGCTCTGGCCCTaGCCTTGCCCCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPGLLWP*PCPWKS
Trigger: GCTCTTCCAGGGGCAAGGCCAGGGCCAGAGCAACCC...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCAGGGTTGCTCTGGCCCTaGCCTTGCCCCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAAGLLWP*PCPWKS
Trigger: GCTCTTCCAGGGGCAAGGCCAGGGCCAGAGCAACCC...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCTGCTGCTCCTGCATCTaGGCCACGCGCTCCCGACAC +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPACCSCI*ATRSRH
Trigger: GTGTCGGGAGCGCGTGGCCCAGATGCAGGAGCAGCA...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATGCTCAAACCTCTGCTaGGCGCGCTCCCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPCSNLC*ARSRSC
Trigger: GCAGGAGCGGGAGCGCGCCCAGCAGAGGTTTGAGCA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCATGCTCAAACCTCTGCTaGGCGCGCTCCCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAACSNLC*ARSRSC
Trigger: GCAGGAGCGGGAGCGCGCCCAGCAGAGGTTTGAGCA...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGTGCCTGGCTGCCTGCTaGCCCAGTCGCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQCLAAC*PSRSFS
Trigger: GGAGAAGGAGCGACTGGGCCAGCAGGCAGCCAGGCA...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACATGCCTGGCTGCCTGCTaGCCCAGTCGCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTCLAAC*PSRSFS
Trigger: GGAGAAGGAGCGACTGGGCCAGCAGGCAGCCAGGCA...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCCACCTGGGCCAGGCTaGCCCGCTCACTGCACATCT +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQPPGPG*PAHCTS
Trigger: AGATGTGCAGTGAGCGGGCCAGCCTGGCCCAGGTGG...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACATCTAGCTCCACCTGCTaGCGGGCCTGCAGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTSSSTC*RACSSA
Trigger: CGCAGAGCTGCAGGCCCGCCAGCAGGTGGAGCTAGA...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCTCTAGCTCCACCTGCTaGCGGGCCTGCAGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPASSSTC*RACSSA
Trigger: CGCAGAGCTGCAGGCCCGCCAGCAGGTGGAGCTAGA...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGTCCGAGCACCGCTCCTaGAGCTTCCGCTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWSEHRS*SFRSDC
Trigger: GCAGTCGGAGCGGAAGCTTCAGGAGCGGTGCTCGGA...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGGCCTCCTCCTGCCGGTaGAGTTCCAGAAGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLASSCR*SSRRFP
Trigger: TGGGAACCTTCTGGAACTGCACCGGCAGGAGGAGGC...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCTTGCTGCCTCCTCCTaGCGGTGCAGTTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHLAASS*RCSSRR
Trigger: CCTTCTGGAACTGCACCGGCAGGAGGAGGCAGCAAG...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTTGCTGCCTCCTCCTaGCGGTGCAGTTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLLAASS*RCSSRR
Trigger: CCTTCTGGAACTGCACCGGCAGGAGGAGGCAGCAAG...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGGGCCTTCTTCCTTGCTaGCTCCTCCTGCCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQGLLPC*LLLPVQ
Trigger: CTGCACCGGCAGGAGGAGGCAGCAAGGAAGAAGGCC...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACGTGAGGTCACGCTGTTaGGCCAGAGCTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHVRSRC*ARALCS
Trigger: GCTGCAGAGAGCTCTGGCGCAACAGCGTGACCTCAC...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACATACTGCTCCTTCTGCTaGCGCAGCTGCCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTYCSFC*RSCRVS
Trigger: GCTGACCCGGCAGCTGCGGCAGCAGAAGGAGCAGTA...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCAGCTCGGCCACCACTaGCTCACACTTCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLQLGHH*LTLLAQ
Trigger: CTGAGCGAGAAGTGTGAGGCAGTGGTGGCCGAGCTG...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGTGCTGCTCAAACCTCTaGTGGGCGCGCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWCCSNL*WARSRS
Trigger: GGAGCGGGAGCGCGCCCAGCAGAGGTTTGAGCAGCA...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGTCCTGCTCCAGGTGCTaGTCAAACCTCTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLSCSRC*SNLCWA
Trigger: CGCCCAGCAGAGGTTTGAGCAGCACCTGGAGCAGGA...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACTCCTGCTCCAGGTGCTaGTCAAACCTCTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHSCSRC*SNLCWA
Trigger: CGCCCAGCAGAGGTTTGAGCAGCACCTGGAGCAGGA...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGAGTCGCCGCCGCTGCTaGTCCAGTGCCCTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWSRRRC*SSALCS
Trigger: GGAACAGAGGGCACTGGAGCAGCAGCGGCGGCGACT...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCACACGGCTCTCGGCTaGTCTCTCGCTCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLHTALG*SLALLL
Trigger: AAGGAGGAGAGCGAGAGAGCAGCCGAGAGCCGTGTG...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCAGCTTCCGCTCCGACTaGTCCAGCTCCGAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVSFRSD*SSSESS
Trigger: AGAGCTCTCGGAGCTGGAGCAGTCGGAGCGGAAGCT...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCGGCTGGCCCGCTCACTaGACATCTGTGTGTTCACCG +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVGWPAH*TSVCSP
Trigger: CGGTGAACACACAGATGTGCAGTGAGCGGGCCAGCC...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCTGCTCTGCAAACTCCTaGCGTACCACCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVCSANS*RTTWAR
Trigger: CCTGGCCCAGGTGGTACGGCAGGAGTTTGCAGAGCA...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGGGCTGCCAGCTGCTCTaGAAACTCCTGCCGTACCAC +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLGCQLL*KLLPYH
Trigger: GTGGTACGGCAGGAGTTTGCAGAGCAGCTGGCAGCC...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCGGCTGCCAGCTGCTCTaGAAACTCCTGCCGTACCAC +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVGCQLL*KLLPYH
Trigger: GTGGTACGGCAGGAGTTTGCAGAGCAGCTGGCAGCC...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCTGGGAGGCTGCCAGCTaGTCTGCAAACTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVWEAAS*SANSCR
Trigger: ACGGCAGGAGTTTGCAGAGCAGCTGGCAGCCTCCCA...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGTGGGAGGCTGCCAGCTaGTCTGCAAACTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLWEAAS*SANSCR
Trigger: ACGGCAGGAGTTTGCAGAGCAGCTGGCAGCCTCCCA...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCTCCTCCTGGGAGGCTaGCAGCTGCTCTGCAAACTC +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHLLLGG*QLLCKL
Trigger: GAGTTTGCAGAGCAGCTGGCAGCCTCCCAGGAGGAG...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCAGCGGGCCTGCAGCTCTaGGAGCTCCACTTTCACCCT +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAAAGLQL*ELHFHP
Trigger: AGGGTGAAAGTGGAGCTCGCAGAGCTGCAGGCCCGC...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCATCGTCTAGCTCCACCTaGTGGCGGGCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAASSSST*WRACSS
Trigger: AGAGCTGCAGGCCCGCCAGCAGGTGGAGCTAGACGA...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACATCGTCTAGCTCCACCTaGTGGCGGGCCTGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTSSSST*WRACSS
Trigger: AGAGCTGCAGGCCCGCCAGCAGGTGGAGCTAGACGA...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCACTCTGAGCACTGGCTaGCAAAGCCAAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVTLSTG*QSQAPG
Trigger: CCCAGGGGCTTGGCTTTGCCAGCCAGTGCTCAGAGT...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCAGCGGTACCAGCGCTaGATGGTAACTGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLQRYQR*MVTAAW
Trigger: CCAGGCTGCAGTTACCATCCAGCGCTGGTACCGCTG...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGCCACCTGGGCCAGGCTaGCCCGCTCACTGCACATCT +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWPPGPG*PAHCTS
Trigger: AGATGTGCAGTGAGCGGGCCAGCCTGGCCCAGGTGG...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTCTGGGTCTCCTCCTaGGAGGCTGCCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQLWVSS*EAASCS
Trigger: AGAGCAGCTGGCAGCCTCCCAGGAGGAGACCCAGAG...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCCCCTGGAAGAGCCTaGCACTGCCAGGTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPAAPGRA*HCQVLS
Trigger: AGACAAGACCTGGCAGTGTCAGGCTCTTCCAGGGGC...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGGCCCCTGGAAGAGCCTaGCACTGCCAGGTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQAPGRA*HCQVLS
Trigger: AGACAAGACCTGGCAGTGTCAGGCTCTTCCAGGGGC...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGGGCCAGGGGCTGCGCTaGGTTTCCCAAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQGQGLR*VSQTSP
Trigger: TGGAGAAGTTTGGGAAACTCAGCGCAGCCCCTGGCC...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGGCCAGGGGCTGCGCTaGGTTTCCCAAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPAGQGLR*VSQTSP
Trigger: TGGAGAAGTTTGGGAAACTCAGCGCAGCCCCTGGCC...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGTGGCCGCTCCTGTCCTaGCTTCTCCATCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLWPLLS*LLHLIQ
Trigger: CTGGATGAGATGGAGAAGTCAGGACAGGAGCGGCCA...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCCTCCAGCCGGTGGATaGCCAACTCAATCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLPPAGG*PTQSPG
Trigger: ACCAGGAGATTGAGTTGGTCATCCACCGGCTGGAGG...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACAGCGGTGAAGCTGGGTaGCAGAGGACACTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHSGEAG*QRTLLP
Trigger: AGGAAGGAGTGTCCTCTGGCACCCAGCTTCACCGCT...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCCTCCTCCTGCCGGTaGAGTTCCAGAAGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPASSCR*SSRRFP
Trigger: TGGGAACCTTCTGGAACTGCACCGGCAGGAGGAGGC...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTTGCTGCCTCCTCCTaGCGGTGCAGTTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQLAASS*RCSSRR
Trigger: CCTTCTGGAACTGCACCGGCAGGAGGAGGCAGCAAG...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGTGAGGTCACGCTGTTaGGCCAGAGCTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPVRSRC*ARALCS
Trigger: GCTGCAGAGAGCTCTGGCGCAACAGCGTGACCTCAC...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCACAGCTCGGCCACCACTaGCTCACACTTCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPQLGHH*LTLLAQ
Trigger: CTGAGCGAGAAGTGTGAGGCAGTGGTGGCCGAGCTG...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACAGCTCGGCCACCACTaGCTCACACTTCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTQLGHH*LTLLAQ
Trigger: CTGAGCGAGAAGTGTGAGGCAGTGGTGGCCGAGCTG...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACATGCTCTTCACGCTGCTaGAGCTCAGCCTCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTCSSRC*SSASCR
Trigger: CCTGCACGAGGCTGAGCTGCAGCAGCGTGAAGAGCA...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGTGCTCTTCACGCTGCTaGAGCTCAGCCTCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQCSSRC*SSASCR
Trigger: CCTGCACGAGGCTGAGCTGCAGCAGCGTGAAGAGCA...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATCCTGCTCCAGGTGCTaGTCAAACCTCTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPSCSRC*SNLCWA
Trigger: CGCCCAGCAGAGGTTTGAGCAGCACCTGGAGCAGGA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACTTCAGCTCCATCTGGTaGCTCCGCTCCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHFSSIW*LRSCSS
Trigger: AGAGGAGCAGGAGCGGAGGCACCAGATGGAGCTGAA...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCCACACGGCTCTCGGCTaGTCTCTCGCTCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPAHTALG*SLALLL
Trigger: AAGGAGGAGAGCGAGAGAGCAGCCGAGAGCCGTGTG...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAAGCTTCCGCTCCGACTaGTCCAGCTCCGAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPSFRSD*SSSESS
Trigger: AGAGCTCTCGGAGCTGGAGCAGTCGGAGCGGAAGCT...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCTGCCTTACTAGGGACTaGAGCCGCTCCTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVCLTRD*SRSFSP
Trigger: AGGGGAGAAGGAGCGGCTGCAGTCCCTAGTAAGGCA...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACAGGCTGGCCCGCTCACTaGACATCTGTGTGTTCACCG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTGWPAH*TSVCSP
Trigger: CGGTGAACACACAGATGTGCAGTGAGCGGGCCAGCC...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATGCTCTGCAAACTCCTaGCGTACCACCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPCSANS*RTTWAR
Trigger: CCTGGCCCAGGTGGTACGGCAGGAGTTTGCAGAGCA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACTCCTCCTGGGAGGCTaGCAGCTGCTCTGCAAACTC +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTLLLGG*QLLCKL
Trigger: GAGTTTGCAGAGCAGCTGGCAGCCTCCCAGGAGGAG...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCTTGTTCCTGAATGGCTaGCTGCCTGGCCTGACGAGC +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVLFLNG*LPGLTS
Trigger: GCTCGTCAGGCCAGGCAGGCAGCCATTCAGGAACAA...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106227.8
CDS-3UTR CCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCAAAGCCAAGCCCCTaGGCTGCTCATCCAGGACGT +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPAAKPSP*AAHPGR
Trigger: ACGTCCTGGATGAGCAGCCCAGGGGCTTGGCTTTGC...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCAAAGCCAAGCCCCTaGGCTGCTCATCCAGGACGT +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPAKPSP*AAHPGR
Trigger: ACGTCCTGGATGAGCAGCCCAGGGGCTTGGCTTTGC...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACAGCAAAGCCAAGCCCCTaGGCTGCTCATCCAGGACGT +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTAKPSP*AAHPGR
Trigger: ACGTCCTGGATGAGCAGCCCAGGGGCTTGGCTTTGC...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCACTCTGAGCACTGGCTaGCAAAGCCAAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPATLSTG*QSQAPG
Trigger: CCCAGGGGCTTGGCTTTGCCAGCCAGTGCTCAGAGT...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGACTCTGAGCACTGGCTaGCAAAGCCAAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQTLSTG*QSQAPG
Trigger: CCCAGGGGCTTGGCTTTGCCAGCCAGTGCTCAGAGT...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCCAGAGTCAAGGGTGCTaGGACTCTGAGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVQSQGC*DSEHWL
Trigger: CAGCCAGTGCTCAGAGTCCCAGCACCCTTGACTCTG...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCAGCGGTACCAGCGCTaGATGGTAACTGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQQRYQR*MVTAAW
Trigger: CCAGGCTGCAGTTACCATCCAGCGCTGGTACCGCTG...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCACAGCGGTACCAGCGCTaGATGGTAACTGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAAQRYQR*MVTAAW
Trigger: CCAGGCTGCAGTTACCATCCAGCGCTGGTACCGCTG...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACGGTGCTCGGGTCTCTaGTCTGTCCTTAGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTRCSGL*SVLRPS
Trigger: AGACGGCCTAAGGACAGACCAGAGACCCGAGCACCG...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCCGGTGCTCGGGTCTCTaGTCTGTCCTTAGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPARCSGL*SVLRPS
Trigger: AGACGGCCTAAGGACAGACCAGAGACCCGAGCACCG...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGTGTCTGGCTTCCCCCTaGGAATGGATGTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLCLASP*EWMSCG
Trigger: GCCACAGGACATCCATTCCCAGGGGGAAGCCAGACA...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCTCTCAGCTTCCAGCTaGTCCTTCAGGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHLSASS*SFRAFS
Trigger: GCTGAAGGCCCTGAAGGACCAGCTGGAAGCTGAGAG...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCATGCTTCCTCCTTCTTaGCACAGCTGGCCACCCACG +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVMLPPS*HSWPPT
Trigger: CGTGGGTGGCCAGCTGTGCCAAGAAGGAGGAAGCAT...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGTCGGCCTCCAGCCGGTaGATGACCAACTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLSASSR*MTNSIS
Trigger: GGAGATTGAGTTGGTCATCCACCGGCTGGAGGCCGA...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGCTCTGGGTCTCCTCCTaGGAGGCTGCCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWLWVSS*EAASCS
Trigger: AGAGCAGCTGGCAGCCTCCCAGGAGGAGACCCAGAG...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGTCCACTTTCACCCTCTaGGTCTCCTCCTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLSTFTL*VSSWEA
Trigger: AGCCTCCCAGGAGGAGACCCAGAGGGTGAAAGTGGA...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCTATGCACCATGGTGGTaGCACAGTTGCCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVYAPWW*HSCPQH
Trigger: GTGCTGTGGGCAACTGTGTCACCACCATGGTGCATA...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCCATTGCTCTGGAGATaGTTCAGAGGCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHPLLWR*FRGRRA
Trigger: TGCCCTCCTGCCTCTGAATCATCTCCAGAGCAATGG...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCATGGCCGCTCCTGTCCTaGCTTCTCCATCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAAWPLLS*LLHLIQ
Trigger: CTGGATGAGATGGAGAAGTCAGGACAGGAGCGGCCA...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGTGGCCGCTCCTGTCCTaGCTTCTCCATCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQWPLLS*LLHLIQ
Trigger: CTGGATGAGATGGAGAAGTCAGGACAGGAGCGGCCA...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCACCTCCAGCCGGTGGATaGCCAACTCAATCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPPPAGG*PTQSPG
Trigger: ACCAGGAGATTGAGTTGGTCATCCACCGGCTGGAGG...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCACCTCCAGCCGGTGGATaGCCAACTCAATCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAAPPAGG*PTQSPG
Trigger: ACCAGGAGATTGAGTTGGTCATCCACCGGCTGGAGG...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGAGGCAGAGTCAAGGGTaGTGGGACTCTGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQRQSQG*WDSEHW
Trigger: CCAGTGCTCAGAGTCCCAGCACCCTTGACTCTGCCT...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACAAGGCAGAGTCAAGGGTaGTGGGACTCTGAGCACTGG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTRQSQG*WDSEHW
Trigger: CCAGTGCTCAGAGTCCCAGCACCCTTGACTCTGCCT...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACAAGCGGTGAAGCTGGGTaGCAGAGGACACTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTSGEAG*QRTLLP
Trigger: AGGAAGGAGTGTCCTCTGGCACCCAGCTTCACCGCT...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCAGCGGTGAAGCTGGGTaGCAGAGGACACTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPASGEAG*QRTLLP
Trigger: AGGAAGGAGTGTCCTCTGGCACCCAGCTTCACCGCT...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGGCCTCCTCCTGCCGGTaGAGTTCCAGAAGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWASSCR*SSRRFP
Trigger: TGGGAACCTTCTGGAACTGCACCGGCAGGAGGAGGC...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGGTGTTCGGCCTCACTTaGCTTCTGGGCTCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLVFGLT*LLGSFL
Trigger: CAGAAACGAGCCCAGAAGGCAAGTGAGGCCGAACAC...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACGTGTTCGGCCTCACTTaGCTTCTGGGCTCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHVFGLT*LLGSFL
Trigger: CAGAAACGAGCCCAGAAGGCAAGTGAGGCCGAACAC...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGTGCTCTTCACGCTGCTaGAGCTCAGCCTCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWCSSRC*SSASCR
Trigger: CCTGCACGAGGCTGAGCTGCAGCAGCGTGAAGAGCA...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCAGTGCCCTCTGTTCCTaGTCCAGGTGCTGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVSALCS*SRCCSN
Trigger: GTTTGAGCAGCACCTGGAGCAGGAACAGAGGGCACT...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACAGTGCCCTCTGTTCCTaGTCCAGGTGCTGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHSALCS*SRCCSN
Trigger: GTTTGAGCAGCACCTGGAGCAGGAACAGAGGGCACT...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGTTCAGCTCCATCTGGTaGCTCCGCTCCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQFSSIW*LRSCSS
Trigger: AGAGGAGCAGGAGCGGAGGCACCAGATGGAGCTGAA...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCCTGGTCAGCAGCCATaGTTCCTCCTTCTTGGCACA +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHPGQQP*FLLLGT
Trigger: TGTGCCAAGAAGGAGGAAGCATGGCTGCTGACCAGG...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGAGCTTCCGCTCCGACTaGTCCAGCTCCGAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWSFRSD*SSSESS
Trigger: AGAGCTCTCGGAGCTGGAGCAGTCGGAGCGGAAGCT...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCTGCCTTACTAGGGACTaGAGCCGCTCCTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPACLTRD*SRSFSP
Trigger: AGGGGAGAAGGAGCGGCTGCAGTCCCTAGTAAGGCA...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGGGCTGGCCCGCTCACTaGACATCTGTGTGTTCACCG +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWGWPAH*TSVCSP
Trigger: CGGTGAACACACAGATGTGCAGTGAGCGGGCCAGCC...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGTGCTCTGCAAACTCCTaGCGTACCACCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWCSANS*RTTWAR
Trigger: CCTGGCCCAGGTGGTACGGCAGGAGTTTGCAGAGCA...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGTGGGAGGCTGCCAGCTaGTCTGCAAACTCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWWEAAS*SANSCR
Trigger: ACGGCAGGAGTTTGCAGAGCAGCTGGCAGCCTCCCA...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGCTCCTCCTGGGAGGCTaGCAGCTGCTCTGCAAACTC +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWLLLGG*QLLCKL
Trigger: GAGTTTGCAGAGCAGCTGGCAGCCTCCCAGGAGGAG...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACAGAGTCAAGGGTGCTaGGACTCTGAGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTQSQGC*DSEHWL
Trigger: CAGCCAGTGCTCAGAGTCCCAGCACCCTTGACTCTG...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCCAGAGTCAAGGGTGCTaGGACTCTGAGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPAQSQGC*DSEHWL
Trigger: CAGCCAGTGCTCAGAGTCCCAGCACCCTTGACTCTG...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGGTTGTAGTACCTGAATaGCTGCCTGCCTGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLVVVPE*LPAWPD
Trigger: GTCAGGCCAGGCAGGCAGCCATTCAGGTACTACAAC...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106229.8
CDS-3UTR CCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGCGGTGCTCGGGTCTCTaGTCTGTCCTTAGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWRCSGL*SVLRPS
Trigger: AGACGGCCTAAGGACAGACCAGAGACCCGAGCACCG...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCTTCCCCCTGGGAATaGATGTCCTGTGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPAASPWE*MSCGLS
Trigger: GGACAAGCCACAGGACATCCATTCCCAGGGGGAAGC...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGGCTTCCCCCTGGGAATaGATGTCCTGTGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQASPWE*MSCGLS
Trigger: GGACAAGCCACAGGACATCCATTCCCAGGGGGAAGC...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATGTCTGGCTTCCCCCTaGGAATGGATGTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPCLASP*EWMSCG
Trigger: GCCACAGGACATCCATTCCCAGGGGGAAGCCAGACA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCACTCTCAGCTTCCAGCTaGTCCTTCAGGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAALSASS*SFRAFS
Trigger: GCTGAAGGCCCTGAAGGACCAGCTGGAAGCTGAGAG...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCCTCTCAGCTTCCAGCTaGTCCTTCAGGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPALSASS*SFRAFS
Trigger: GCTGAAGGCCCTGAAGGACCAGCTGGAAGCTGAGAG...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCAATGCTTCCTCCTTCTTaGCACAGCTGGCCACCCACG +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAAMLPPS*HSWPPT
Trigger: CGTGGGTGGCCAGCTGTGCCAAGAAGGAGGAAGCAT...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGTCGGCCTCCAGCCGGTaGATGACCAACTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQSASSR*MTNSIS
Trigger: GGAGATTGAGTTGGTCATCCACCGGCTGGAGGCCGA...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATCGGCCTCCAGCCGGTaGATGACCAACTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPSASSR*MTNSIS
Trigger: GGAGATTGAGTTGGTCATCCACCGGCTGGAGGCCGA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCTCCACTTTCACCCTCTaGGTCTCCTCCTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPASTFTL*VSSWEA
Trigger: AGCCTCCCAGGAGGAGACCCAGAGGGTGAAAGTGGA...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCAGCAGTTCCTCTAGGTaGTCCGCCCGCTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPASSSSR*SARFTA
Trigger: TGCTGTGAAGCGGGCGGACCACCTAGAGGAACTGCT...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCAAGCAGTTCCTCTAGGTaGTCCGCCCGCTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAASSSSR*SARFTA
Trigger: TGCTGTGAAGCGGGCGGACCACCTAGAGGAACTGCT...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGGTTGTTCTACCTGAATaGCTGCCTGCCTGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLVVLPE*LPAWPD
Trigger: GTCAGGCCAGGCAGGCAGCCATTCAGGTAGAACAAC...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGTATGCACCATGGTGGTaGCACAGTTGCCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQYAPWW*HSCPQH
Trigger: GTGCTGTGGGCAACTGTGTCACCACCATGGTGCATA...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCCTTCACAATATTGTTaGGGGAGGGGGCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHPSQYC*GRGLSG
Trigger: ACCAGACAGCCCCCTCCCTCAACAATATTGTGAAGG...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCCTTCACAATATTGTTaGGGGAGGGGGCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLPSQYC*GRGLSG
Trigger: ACCAGACAGCCCCCTCCCTCAACAATATTGTGAAGG...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATTGCTCTGGAGATaGTTCAGAGGCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTPLLWR*FRGRRA
Trigger: TGCCCTCCTGCCTCTGAATCATCTCCAGAGCAATGG...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCACCATTGCTCTGGAGATaGTTCAGAGGCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAAPLLWR*FRGRRA
Trigger: TGCCCTCCTGCCTCTGAATCATCTCCAGAGCAATGG...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGTGTTCGGCCTCACTTaGCTTCTGGGCTCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPAVFGLT*LLGSFL
Trigger: CAGAAACGAGCCCAGAAGGCAAGTGAGGCCGAACAC...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACATGTTCCTGCTCCAGGTaGTGCTCAAACCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTCSCSR*CSNLCW
Trigger: CCAGCAGAGGTTTGAGCAGCACCTGGAGCAGGAACA...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAAGTGCCCTCTGTTCCTaGTCCAGGTGCTGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPSALCS*SRCCSN
Trigger: GTTTGAGCAGCACCTGGAGCAGGAACAGAGGGCACT...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCCTGGTCAGCAGCCATaGTTCCTCCTTCTTGGCACA +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQPGQQP*FLLLGT
Trigger: TGTGCCAAGAAGGAGGAAGCATGGCTGCTGACCAGG...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCACAGCCTCATGCTGTTTaGGGAGACTGTTCACGGCTG +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAAQPHAV*GDCSRL
Trigger: CAGCCGTGAACAGTCTCCGCAAACAGCATGAGGCTG...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCACAGCCTCATGCTGTTTaGGGAGACTGTTCACGGCTG +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPQPHAV*GDCSRL
Trigger: CAGCCGTGAACAGTCTCCGCAAACAGCATGAGGCTG...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACAGCCTCATGCTGTTTaGGGAGACTGTTCACGGCTG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTQPHAV*GDCSRL
Trigger: CAGCCGTGAACAGTCTCCGCAAACAGCATGAGGCTG...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCACAAGTCCACAGCTTCTaGACTGCCTTCAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPQVHSF*TAFRSG
Trigger: GCCACTCCTGAAGGCAGTCCAGAAGCTGTGGACTTG...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACAAGTCCACAGCTTCTaGACTGCCTTCAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTQVHSF*TAFRSG
Trigger: GCCACTCCTGAAGGCAGTCCAGAAGCTGTGGACTTG...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCCCAGGACGTTCCACGTaGCTTCCTTCTCACTGGATG +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPAPGRST*LPSHWM
Trigger: CATCCAGTGAGAAGGAAGCCACGTGGAACGTCCTGG...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCACCAGGACGTTCCACGTaGCTTCCTTCTCACTGGATG +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAAPGRST*LPSHWM
Trigger: CATCCAGTGAGAAGGAAGCCACGTGGAACGTCCTGG...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGGGAATGGATGTCCTGTaGCTTGTCCTCTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLGMDVL*LVLWRL
Trigger: CAGTCTCCAGAGGACAAGCCACAGGACATCCATTCC...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGGCTTCCCCCTGGGAATaGATGTCCTGTGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWASPWE*MSCGLS
Trigger: GGACAAGCCACAGGACATCCATTCCCAGGGGGAAGC...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGTGTCTGGCTTCCCCCTaGGAATGGATGTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWCLASP*EWMSCG
Trigger: GCCACAGGACATCCATTCCCAGGGGGAAGCCAGACA...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGAAGGACAAGTGCCGTTaGATGGTGGCCTCATACTGC +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLKDKCR*MVASYC
Trigger: GCAGTATGAGGCCACCATCCAACGGCACTTGTCCTT...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACATCTCGCTCTCCTCCTTaGCCAGTGTCATATCGGCCT +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTSRSPP*PVSYRP
Trigger: AGGCCGATATGACACTGGCCAAGGAGGAGAGCGAGA...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATCTCGCTCTCCTCCTTaGCCAGTGTCATATCGGCCT +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPSRSPP*PVSYRP
Trigger: AGGCCGATATGACACTGGCCAAGGAGGAGAGCGAGA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGTCCACTTTCACCCTCTaGGTCTCCTCCTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWSTFTL*VSSWEA
Trigger: AGCCTCCCAGGAGGAGACCCAGAGGGTGAAAGTGGA...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGAGCAGTTCCTCTAGGTaGTCCGCCCGCTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWSSSSR*SARFTA
Trigger: TGCTGTGAAGCGGGCGGACCACCTAGAGGAACTGCT...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACATCTGTTGTTCCTGAATaGCTGCCTGCCTGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTSVVPE*LPAWPD
Trigger: GTCAGGCCAGGCAGGCAGCCATTCAGGAACAACAGA...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106227.8
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGGCCTCACTTGCCTTCTaGGCTCGTTTCTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLASLAF*ARFCCS
Trigger: GGAACAACAGAAACGAGCCCAGAAGGCAAGTGAGGC...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106227.8
CDS-3UTR TCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCACTTCAGGAGTGGCAGTaGTGGTCCGTGAACCTTTCA +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAALQEWQ*WSVNLS
Trigger: TGAAAGGTTCACGGACCATCACTGCCACTCCTGAAG...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCCTTCAGGAGTGGCAGTaGTGGTCCGTGAACCTTTCA +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPALQEWQ*WSVNLS
Trigger: TGAAAGGTTCACGGACCATCACTGCCACTCCTGAAG...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCACCTTCACAATATTGTTaGGGGAGGGGGCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPPSQYC*GRGLSG
Trigger: ACCAGACAGCCCCCTCCCTCAACAATATTGTGAAGG...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCTTCTCCCACTGGTGCTaGCCTCAAAGAGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPAFSHWC*PQRASG
Trigger: TCCTGATGCTCTTTGAGGGCAGCACCAGTGGGAGAA...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATTCTCCCACTGGTGCTaGCCTCAAAGAGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPFSHWC*PQRASG
Trigger: TCCTGATGCTCTTTGAGGGCAGCACCAGTGGGAGAA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACTTCCTTCTCACTGGATaGCTTGCTAAGACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHFLLTG*LAKTGH
Trigger: GTGGCCAGTCTTAGCAAGGCATCCAGTGAGAAGGAA...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCAGCCGCCTCACCTCTTaGTTGTGCTTGGCAATTAGT +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVSRLTS*LCLAIS
Trigger: ACTAATTGCCAAGCACAAGCAAGAGGTGAGGCGGCT...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGTGTTCCTGCTCCAGGTaGTGCTCAAACCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWCSCSR*CSNLCW
Trigger: CCAGCAGAGGTTTGAGCAGCACCTGGAGCAGGAACA...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGCCTGGTCAGCAGCCATaGTTCCTCCTTCTTGGCACA +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWPGQQP*FLLLGT
Trigger: TGTGCCAAGAAGGAGGAAGCATGGCTGCTGACCAGG...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGCCAGGACGTTCCACGTaGCTTCCTTCTCACTGGATG +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWPGRST*LPSHWM
Trigger: CATCCAGTGAGAAGGAAGCCACGTGGAACGTCCTGG...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACAGGAATGGATGTCCTGTaGCTTGTCCTCTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTGMDVL*LVLWRL
Trigger: CAGTCTCCAGAGGACAAGCCACAGGACATCCATTCC...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAAAGGACAAGTGCCGTTaGATGGTGGCCTCATACTGC +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPKDKCR*MVASYC
Trigger: GCAGTATGAGGCCACCATCCAACGGCACTTGTCCTT...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGACCAACTCAATCTCCTaGTCTCGGCCTTTTCGGATC +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLTNSIS*SRPFRI
Trigger: GATCCGAAAAGGCCGAGACCAGGAGATTGAGTTGGT...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCACCAACTCAATCTCCTaGTCTCGGCCTTTTCGGATC +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVTNSIS*SRPFRI
Trigger: GATCCGAAAAGGCCGAGACCAGGAGATTGAGTTGGT...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGCTTCAGGAGTGGCAGTaGTGGTCCGTGAACCTTTCA +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWLQEWQ*WSVNLS
Trigger: TGAAAGGTTCACGGACCATCACTGCCACTCCTGAAG...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCACAATCAGCTGGTCAATaGAGGACAAGTGCCGTTGGA +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPQSAGQ*RTSAVG
Trigger: TCCAACGGCACTTGTCCTTCATTGACCAGCTGATTG...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCACAATCAGCTGGTCAATaGAGGACAAGTGCCGTTGGA +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAAQSAGQ*RTSAVG
Trigger: TCCAACGGCACTTGTCCTTCATTGACCAGCTGATTG...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATTCTTCTCCCACTGGTaGTGCCCTCAAAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPFFSHW*CPQRAS
Trigger: TGATGCTCTTTGAGGGCAGCACCAGTGGGAGAAGAA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACATTCTTCTCCCACTGGTaGTGCCCTCAAAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTFFSHW*CPQRAS
Trigger: TGATGCTCTTTGAGGGCAGCACCAGTGGGAGAAGAA...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCTTCCTTCTCACTGGATaGCTTGCTAAGACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPAFLLTG*LAKTGH
Trigger: GTGGCCAGTCTTAGCAAGGCATCCAGTGAGAAGGAA...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGTCCCTCACGGGCTGCTaGCTTCACAATATTGTTGAG +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQSLTGC*LHNIVE
Trigger: CTCAACAATATTGTGAAGGCAGCAGCCCGTGAGGGA...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACATCCCTCACGGGCTGCTaGCTTCACAATATTGTTGAG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTSLTGC*LHNIVE
Trigger: CTCAACAATATTGTGAAGGCAGCAGCCCGTGAGGGA...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATCCCTCACGGGCTGCTaGCTTCACAATATTGTTGAG +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPSLTGC*LHNIVE
Trigger: CTCAACAATATTGTGAAGGCAGCAGCCCGTGAGGGA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCTCAATGAAGGACAAGTaGCGTTGGATGGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPASMKDK*RWMVAS
Trigger: TGAGGCCACCATCCAACGGCACTTGTCCTTCATTGA...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGTCAATGAAGGACAAGTaGCGTTGGATGGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQSMKDK*RWMVAS
Trigger: TGAGGCCACCATCCAACGGCACTTGTCCTTCATTGA...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCATCAATGAAGGACAAGTaGCGTTGGATGGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAASMKDK*RWMVAS
Trigger: TGAGGCCACCATCCAACGGCACTTGTCCTTCATTGA...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCAGCCGCCTCACCTCTTaGTTGTGCTTGGCAATTAGT +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPASRLTS*LCLAIS
Trigger: ACTAATTGCCAAGCACAAGCAAGAGGTGAGGCGGCT...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACAAGTTCCTTCTCCTTCTaGCTTACTAGGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTSSFSF*LTRDCS
Trigger: GCTGCAGTCCCTAGTAAGGCAGAAGGAGAAGGAACT...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCAGTTCCTTCTCCTTCTaGCTTACTAGGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPASSFSF*LTRDCS
Trigger: GCTGCAGTCCCTAGTAAGGCAGAAGGAGAAGGAACT...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGAGTTCCTTCTCCTTCTaGCTTACTAGGGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQSSFSF*LTRDCS
Trigger: GCTGCAGTCCCTAGTAAGGCAGAAGGAGAAGGAACT...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCCTCACTTGCCTTCTaGGCTCGTTTCTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPASLAF*ARFCCS
Trigger: ACTACAACAGAAACGAGCCCAGAAGGCAAGTGAGGC...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106229.8
CDS-3UTR CCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGGGAATGGATGTCCTGTaGCTTGTCCTCTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWGMDVL*LVLWRL
Trigger: CAGTCTCCAGAGGACAAGCCACAGGACATCCATTCC...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGACCAACTCAATCTCCTaGTCTCGGCCTTTTCGGATC +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQTNSIS*SRPFRI
Trigger: GATCCGAAAAGGCCGAGACCAGGAGATTGAGTTGGT...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCCTCACTTGCCTTCTaGGCTCGTTTCTGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPAASLAF*ARFCCS
Trigger: AGAACAACAGAAACGAGCCCAGAAGGCAAGTGAGGC...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGCAATCAGCTGGTCAATaGAGGACAAGTGCCGTTGGA +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWQSAGQ*RTSAVG
Trigger: TCCAACGGCACTTGTCCTTCATTGACCAGCTGATTG...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATCTTCGTTTTCTCATTaGTCCACTTCTCACGCCGGA +
Preference number: 4 (lower is better)
Translates to: HADSNVPGTGLHGASHTPSSFSH*STSHAG
Trigger: TCCGGCGTGAGAAGTGGATCAATGAGAAAACGAAGA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGTCTTCGTTTTCTCATTaGTCCACTTCTCACGCCGGA +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQSSFSH*STSHAG
Trigger: TCCGGCGTGAGAAGTGGATCAATGAGAAAACGAAGA...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGTTCTTCTCCCACTGGTaGTGCCCTCAAAGAGCATCA +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWFFSHW*CPQRAS
Trigger: TGATGCTCTTTGAGGGCAGCACCAGTGGGAGAAGAA...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCCTCACCTCTTGCTTGTaGTTGGCAATTAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVLTSCL*LAISFW
Trigger: CCAGAAACTAATTGCCAAGCACAAGCAAGAGGTGAG...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGAGCCGCCTCACCTCTTaGTTGTGCTTGGCAATTAGT +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWSRLTS*LCLAIS
Trigger: ACTAATTGCCAAGCACAAGCAAGAGGTGAGGCGGCT...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR TCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGTCTTCGTTTTCTCATTaGTCCACTTCTCACGCCGGA +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWSSFSH*STSHAG
Trigger: TCCGGCGTGAGAAGTGGATCAATGAGAAAACGAAGA...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR GCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACTCACCTCTTGCTTGTaGTTGGCAATTAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTLTSCL*LAISFW
Trigger: CCAGAAACTAATTGCCAAGCACAAGCAAGAGGTGAG...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACTTGTCTTCAATCAGCTaGTCAATGAAGGACAAGTGC +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHLSSIS*SMKDKC
Trigger: GCACTTGTCCTTCATTGACCAGCTGATTGAAGACAA...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACTTGGCAATTAGTTTCTaGATCTCAGGCTCTAGACCT +
Preference number: 4 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHLAISF*ISGSRP
Trigger: AGGTCTAGAGCCTGAGATCCAGAAACTAATTGCCAA...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCCTCTTGCTTGTGCTTaGCAATTAGTTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLPLACA*QLVSGS
Trigger: AGATCCAGAAACTAATTGCCAAGCACAAGCAAGAGG...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGTTGTCTTCAATCAGCTaGTCAATGAAGGACAAGTGC +
Preference number: 4 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQLSSIS*SMKDKC
Trigger: GCACTTGTCCTTCATTGACCAGCTGATTGAAGACAA...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCTTGGCAATTAGTTTCTaGATCTCAGGCTCTAGACCT +
Preference number: 4 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPALAISF*ISGSRP
Trigger: AGGTCTAGAGCCTGAGATCCAGAAACTAATTGCCAA...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCTCTTGCTTGTGCTTaGCAATTAGTTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: RHADSNVPGTGLHGASHTPLACA*QLVSGS
Trigger: AGATCCAGAAACTAATTGCCAAGCACAAGCAAGAGG...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGTTGGCAATTAGTTTCTaGATCTCAGGCTCTAGACCT +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWLAISF*ISGSRP
Trigger: AGGTCTAGAGCCTGAGATCCAGAAACTAATTGCCAA...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CCA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGCCTCTTGCTTGTGCTTaGCAATTAGTTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWPLACA*QLVSGS
Trigger: AGATCCAGAAACTAATTGCCAAGCACAAGCAAGAGG...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp CGCCGCCGCTGCTGCTCCAGTGCCCTCTGTTCCTGCTCCAGGTGCTaGTCAAACCTCTGCTGGGCGCGCTCCCGCTCCTGCTGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: RRRCCSSALCSCSRC*SNLCWARSRSCWPS
Trigger: GCTGGGCCAGCAGGAGCGGGAGCGCGCCCAGCAGAGGTTTGAGCAGCACCTGGAGCAGGAACAGAGGGCACTGGAGCAGCAGCGGCGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp GTCCAGGTGCTGCCGCAGCTCTTCCGCCTGACGCAGGTGGCGCTGTaGGGCCTGCTCTTCACGCTGCTGCAGCTCAGCCTCGTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: VQVLPQLFRLTQVAL*GLLFTLLQLSLVQA
Trigger: GGCCTGCACGAGGCTGAGCTGCAGCAGCGTGAAGAGCAGGCCGCACAGCGCCACCTGCGTCAGGCGGAAGAGCTGCGGCAGCACCTGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp AGTCGCCGCCGCTGCTGCTCCAGTGCCCTCTGTTCCTGCTCCAGGTaGTGCTCAAACCTCTGCTGGGCGCGCTCCCGCTCCTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: SRRRCCSSALCSCSR*CSNLCWARSRSCWP
Trigger: GGGCCAGCAGGAGCGGGAGCGCGCCCAGCAGAGGTTTGAGCAGCACCTGGAGCAGGAACAGAGGGCACTGGAGCAGCAGCGGCGGCGACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp TCCAGGTGCTGCTCAAACCTCTGCTGGGCGCGCTCCCGCTCCTGCTaGCCCAGCACCTCCCTCTCCCGGTCCAGGTGCTGCCGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SRCCSNLCWARSRSC*PSTSLSRSRCCRSS
Trigger: AGAGCTGCGGCAGCACCTGGACCGGGAGAGGGAGGTGCTGGGCCAGCAGGAGCGGGAGCGCGCCCAGCAGAGGTTTGAGCAGCACCTGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp CCTCCCAACCGTTGCCTCTGCCCCTCTCGCTTGGACGCTAGCAGGTaGTCGAGGGCTGCTGCTCCCGCTCGGCGCCTCTGTACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PPNRCLCPSRLDASR*SRAAAPARRLCTWQ
Trigger: CTGCCAGGTACAGAGGCGCCGAGCGGGAGCAGCAGCCCTCGAGCACCTGCTAGCGTCCAAGCGAGAGGGGCAGAGGCAACGGTTGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp CCAGAAGGTTCCCACCTCCCAACCGTTGCCTCTGCCCCTCTCGCTTaGACGCTAGCAGGTGCTCGAGGGCTGCTGCTCCCGCTCGGCGCC +
Preference number: 5 (lower is better)
Translates to: PEGSHLPTVASAPLA*TLAGARGLLLPLGA
Trigger: GGCGCCGAGCGGGAGCAGCAGCCCTCGAGCACCTGCTAGCGTCCAAGCGAGAGGGGCAGAGGCAACGGTTGGGAGGTGGGAACCTTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp AGTTCGTGCTGCTCCTGCATCTGGGCCACGCGCTCCCGACACCGCTaGTCCCCGTGCTTCAGCTCGGCCACCACTGCCTCACACTTCTCG +
Preference number: 5 (lower is better)
Translates to: SSCCSCIWATRSRHR*SPCFSSATTASHFS
Trigger: CGAGAAGTGTGAGGCAGTGGTGGCCGAGCTGAAGCACGGGGACCAGCGGTGTCGGGAGCGCGTGGCCCAGATGCAGGAGCAGCACGAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS TCA 90 bp CCTTCGGCCTCCCCCAGGCGGCCTTTCAGCTCCGAGCACCGCTCCTaGAGCTTCCGCTCCGACTGCTCCAGCTCCGAGAGCTCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: PSASPRRPFSSEHRS*SFRSDCSSSESSVS
Trigger: TGAAACAGAGCTCTCGGAGCTGGAGCAGTCGGAGCGGAAGCTTCAGGAGCGGTGCTCGGAGCTGAAAGGCCGCCTGGGGGAGGCCGAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp CTCCAGCTGCTGCCTCAGCTCCTCCAACTCTGCCCGCTGCCTGGCTaGCTGCTGGCCCAGTCGCTCCTTCTCCTCGGCCACCTCATTGTA +
Preference number: 5 (lower is better)
Translates to: LQLLPQLLQLCPLPG*LLAQSLLLLGHLIV
Trigger: TACAATGAGGTGGCCGAGGAGAAGGAGCGACTGGGCCAGCAGGCAGCCAGGCAGCGGGCAGAGTTGGAGGAGCTGAGGCAGCAGCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp TTCACCCTCCGGTGCACCTCGTCTAGCTCCACCTGCTGGCGGGCCTaGAGCTCTGCGAGCTCCACTTTCACCCTCTGGGTCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: FTLRCTSSSSTCWRA*SSASSTFTLWVSSW
Trigger: CCAGGAGGAGACCCAGAGGGTGAAAGTGGAGCTCGCAGAGCTGCAGGCCCGCCAGCAGGTGGAGCTAGACGAGGTGCACCGGAGGGTGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp GCTAGAGCCGTCTTCACCCTCCGGTGCACCTCGTCTAGCTCCACCTaGTGGCGGGCCTGCAGCTCTGCGAGCTCCACTTTCACCCTCTGG +
Preference number: 5 (lower is better)
Translates to: ARAVFTLRCTSSSST*WRACSSASSTFTLW
Trigger: CCAGAGGGTGAAAGTGGAGCTCGCAGAGCTGCAGGCCCGCCAGCAGGTGGAGCTAGACGAGGTGCACCGGAGGGTGAAGACGGCTCTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp AGAGCCGTCTTCACCCTCCGGTGCACCTCGTCTAGCTCCACCTGCTaGCGGGCCTGCAGCTCTGCGAGCTCCACTTTCACCCTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: RAVFTLRCTSSSSTC*RACSSASSTFTLWV
Trigger: GACCCAGAGGGTGAAAGTGGAGCTCGCAGAGCTGCAGGCCCGCCAGCAGGTGGAGCTAGACGAGGTGCACCGGAGGGTGAAGACGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp CCAGAGGACACTCCTTCCTCCGTGGGCCCAAGGCAGAGTCAAGGGTaGTGGGACTCTGAGCACTGGCTGGCAAAGCCAAGCCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: PEDTPSSVGPRQSQG*WDSEHWLAKPSPWA
Trigger: AGCCCAGGGGCTTGGCTTTGCCAGCCAGTGCTCAGAGTCCCAGCACCCTTGACTCTGCCTTGGGCCCACGGAGGAAGGAGTGTCCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp TGCCTGCCTGGCCTGACGAGCCTTTTCCTCCCGGGCCTTCTTCCTTaGTGCCTCCTCCTGCCGGTGCAGTTCCAGAAGGTTCCCACCTCC +
Preference number: 5 (lower is better)
Translates to: CLPGLTSLFLPGLLP*CLLLPVQFQKVPTS
Trigger: GGAGGTGGGAACCTTCTGGAACTGCACCGGCAGGAGGAGGCAGCAAGGAAGAAGGCCCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp TCCGTGGGCCCAAGGCAGAGTCAAGGGTGCTGGGACTCTGAGCACTaGCTGGCAAAGCCAAGCCCCTGGGCTGCTCATCCAGGACGTTCC +
Preference number: 5 (lower is better)
Translates to: SVGPRQSQGCWDSEH*LAKPSPWAAHPGRS
Trigger: GGAACGTCCTGGATGAGCAGCCCAGGGGCTTGGCTTTGCCAGCCAGTGCTCAGAGTCCCAGCACCCTTGACTCTGCCTTGGGCCCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp GAGGACACTCCTTCCTCCGTGGGCCCAAGGCAGAGTCAAGGGTGCTaGGACTCTGAGCACTGGCTGGCAAAGCCAAGCCCCTGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: EDTPSSVGPRQSQGC*DSEHWLAKPSPWAA
Trigger: AGCAGCCCAGGGGCTTGGCTTTGCCAGCCAGTGCTCAGAGTCCCAGCACCCTTGACTCTGCCTTGGGCCCACGGAGGAAGGAGTGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCACCCGGGCCTTCTTCCTaGCTGCCTCCTCCTGCCGGT +
Preference number: 5 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAAPGPSS*LPPPAG
Trigger: ACCGGCAGGAGGAGGCAGCAAGGAAGAAGGCCCGGG...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCCCGGGCCTTCTTCCTaGCTGCCTCCTCCTGCCGGT +
Preference number: 5 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQPGPSS*LPPPAG
Trigger: ACCGGCAGGAGGAGGCAGCAAGGAAGAAGGCCCGGG...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCCTCTGCCCCTCTCGCTaGGACGCTAGCAGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPALCPSR*DASRCS
Trigger: CGAGCACCTGCTAGCGTCCAAGCGAGAGGGGCAGAG...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCACTCTGCCCCTCTCGCTaGGACGCTAGCAGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAALCPSR*DASRCS
Trigger: CGAGCACCTGCTAGCGTCCAAGCGAGAGGGGCAGAG...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp CCGAGGCTTCCCCAAGTCGCTGCCCTCACCTCCCTCACGGGCTGCTaGCTTCACAATATTGTTGAGGGAGGGGGCTGTCTGGTTGGAGCT +
Preference number: 5 (lower is better)
Translates to: PRLPQVAALTSLTGC*LHNIVEGGGCLVGA
Trigger: AGCTCCAACCAGACAGCCCCCTCCCTCAACAATATTGTGAAGGCAGCAGCCCGTGAGGGAGGTGAGGGCAGCGACTTGGGGAAGCCTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp CCCTGGCCTTGCCCCTGGAAGAGCCTGACACTGCCAGGTCTTGTCTaGCTTCCCCCTGGGAATGGATGTCCTGTGGCTTGTCCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: PWPCPWKSLTLPGLV*LPPGNGCPVACPLE
Trigger: CTCCAGAGGACAAGCCACAGGACATCCATTCCCAGGGGGAAGCCAGACAAGACCTGGCAGTGTCAGGCTCTTCCAGGGGCAAGGCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp CACGTTCCCTGGTCAGCAGCCATGCTTCCTCCTTCTTGGCACAGCTaGCCACCCACGCCTGTCTCTCAGCTTCCAGCTGGTCCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: HVPWSAAMLPPSWHS*PPTPVSQLPAGPSG
Trigger: CCCTGAAGGACCAGCTGGAAGCTGAGAGACAGGCGTGGGTGGCCAGCTGTGCCAAGAAGGAGGAAGCATGGCTGCTGACCAGGGAACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGCTCTGCCCCTCTCGCTaGGACGCTAGCAGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWLCPSR*DASRCS
Trigger: CGAGCACCTGCTAGCGTCCAAGCGAGAGGGGCAGAG...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCATGCTTCCTCCTTCTaGGCACAGCTGGCCACCCAC +
Preference number: 5 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLHASSF*AQLATH
Trigger: GTGGGTGGCCAGCTGTGCCAAGAAGGAGGAAGCATG...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATGCTTCCTCCTTCTaGGCACAGCTGGCCACCCAC +
Preference number: 5 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHHASSF*AQLATH
Trigger: GTGGGTGGCCAGCTGTGCCAAGAAGGAGGAAGCATG...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS TCA 90 bp CGGCCTGCTCTTCACGCTGCTGCAGCTCAGCCTCGTGCAGGCCCCTaGGCCGCCTCACCTCTTGCTTGTGCTTGGCAATTAGTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: RPALHAAAAQPRAGP*AASPLACAWQLVSG
Trigger: TCCAGAAACTAATTGCCAAGCACAAGCAAGAGGTGAGGCGGCTCAGGGGCCTGCACGAGGCTGAGCTGCAGCAGCGTGAAGAGCAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp CTTCCGAGGCTTCCCCAAGTCGCTGCCCTCACCTCCCTCACGGGCTaGTGCCTTCACAATATTGTTGAGGGAGGGGGCTGTCTGGTTGGA +
Preference number: 5 (lower is better)
Translates to: LPRLPQVAALTSLTG*CLHNIVEGGGCLVG
Trigger: TCCAACCAGACAGCCCCCTCCCTCAACAATATTGTGAAGGCAGCAGCCCGTGAGGGAGGTGAGGGCAGCGACTTGGGGAAGCCTCGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp CTGCAAACTCCTGCCGTACCACCTGGGCCAGGCTGGCCCGCTCACTaGACATCTGTGTGTTCACCGCCCGCAGGTCTTCTAGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: LQTPAVPPGPGWPAH*TSVCSPPAGLLVPS
Trigger: AGAAGGAACTAGAAGACCTGCGGGCGGTGAACACACAGATGTGCAGTGAGCGGGCCAGCCTGGCCCAGGTGGTACGGCAGGAGTTTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp GCAGCTTCAGTGTGTCCAGAAGATCGTCCAGGGTTGCTCTGGCCCTaGCCTTGCCCCTGGAAGAGCCTGACACTGCCAGGTCTTGTCTGG +
Preference number: 5 (lower is better)
Translates to: AASVCPEDRPGLLWP*PCPWKSLTLPGLVW
Trigger: CCAGACAAGACCTGGCAGTGTCAGGCTCTTCCAGGGGCAAGGCCAGGGCCAGAGCAACCCTGGACGATCTTCTGGACACACTGAAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp CCTTCAGCTCACGTTCCCTGGTCAGCAGCCATGCTTCCTCCTTCTTaGCACAGCTGGCCACCCACGCCTGTCTCTCAGCTTCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: PSAHVPWSAAMLPPS*HSWPPTPVSQLPAG
Trigger: ACCAGCTGGAAGCTGAGAGACAGGCGTGGGTGGCCAGCTGTGCCAAGAAGGAGGAAGCATGGCTGCTGACCAGGGAACGTGAGCTGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGGCACCAGCGTTGTaGGCCTTAGGGTGTGTGACG +
Preference number: 5 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQLAPAL*ALGCVT
Trigger: CGTCACACACCCTAAGGCCAACAACGCTGGTGCCAG...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACATGCTTCCTCCTTCTaGGCACAGCTGGCCACCCAC +
Preference number: 5 (lower is better)
Translates to: RHADSNVPGTGLHGASHTHASSF*AQLATH
Trigger: GTGGGTGGCCAGCTGTGCCAAGAAGGAGGAAGCATG...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp GGGCTGCTCATCCAGGACGTTCCACGTGGCTTCCTTCTCACTGGATaGCTTGCTAAGACTGGCCACCCTTCTTCTCCCACTGGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: GLLIQDVPRGFLLTG*LAKTGHPSSPTGAA
Trigger: GGCAGCACCAGTGGGAGAAGAAGGGTGGCCAGTCTTAGCAAGGCATCCAGTGAGAAGGAAGCCACGTGGAACGTCCTGGATGAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp GCCCACAGCACCTTTGTTGCTCCTGTTGTTAGCGGTGAAGCTGGGTaGCAGAGGACACTCCTTCCTCCGTGGGCCCAAGGCAGAGTCAAG +
Preference number: 5 (lower is better)
Translates to: AHSTFVAPVVSGEAG*QRTLLPPWAQGRVK
Trigger: CTTGACTCTGCCTTGGGCCCACGGAGGAAGGAGTGTCCTCTGGCACCCAGCTTCACCGCTAACAACAGGAGCAACAAAGGTGCTGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp GCGCTCCCGACACCGCTGGTCCCCGTGCTTCAGCTCGGCCACCACTaGCTCACACTTCTCGCTCAGAACTTTCTTGTCTTCAATCAGCTG +
Preference number: 5 (lower is better)
Translates to: ALPTPLVPVLQLGHH*LTLLAQNFLVFNQL
Trigger: CAGCTGATTGAAGACAAGAAAGTTCTGAGCGAGAAGTGTGAGGCAGTGGTGGCCGAGCTGAAGCACGGGGACCAGCGGTGTCGGGAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp GTGGCACTCATGAGTTCTTTGAGTTTCTTGATCTCCAGTTCGTGCTaGTCCTGCATCTGGGCCACGCGCTCCCGACACCGCTGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: VALMSSLSFLISSSC*SCIWATRSRHRWSP
Trigger: CGGGGACCAGCGGTGTCGGGAGCGCGTGGCCCAGATGCAGGAGCAGCACGAACTGGAGATCAAGAAACTCAAAGAACTCATGAGTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp GGCCTCACTTGCCTTCTGGGCTCGTTTCTGTTGTTCCTGAATGGCTaGCTGCCTGGCCTGACGAGCCTTTTCCTCCCGGGCCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: GLTCLLGSFLLFLNG*LPGLTSLFLPGLLP
Trigger: AGGAAGAAGGCCCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGAACAACAGAAACGAGCCCAGAAGGCAAGTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106227.8
CDS CCA 90 bp ATGGAACGGAAAATAGACCTTGTGGCAGAGGCACTGCCGGGCCGCTaGGACATGGGCGGAGGGAGGCCAATCAGACTCAAGTCCACAGCT +
Preference number: 5 (lower is better)
Translates to: MERKIDLVAEALPGR*DMGGGRPIRLKSTA
Trigger: AGCTGTGGACTTGAGTCTGATTGGCCTCCCTCCGCCCATGTCCCAGCGGCCCGGCAGTGCCTCTGCCACAAGGTCTATTTTCCGTTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp CGGCCTCACTTGCCTTCTGGGCTCGTTTCTGTTGTAGTACCTGAATaGCTGCCTGCCTGGCCTGACGAGCCTTTTCCTCCCGGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: RPHLPSGLVSVVVPE*LPAWPDEPFPPGPS
Trigger: AGAAGGCCCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGTACTACAACAGAAACGAGCCCAGAAGGCAAGTGAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106229.8
CDS CCA 90 bp CCCCTGGAAGAGCCTGACACTGCCAGGTCTTGTCTGGCTTCCCCCTaGGAATGGATGTCCTGTGGCTTGTCCTCTGGAGACTGCCATTGC +
Preference number: 5 (lower is better)
Translates to: PLEEPDTARSCLASP*EWMSCGLSSGDCHC
Trigger: GCAATGGCAGTCTCCAGAGGACAAGCCACAGGACATCCATTCCCAGGGGGAAGCCAGACAAGACCTGGCAGTGTCAGGCTCTTCCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp AGTTCTTTGAGTTTCTTGATCTCCAGTTCGTGCTGCTCCTGCATCTaGGCCACGCGCTCCCGACACCGCTGGTCCCCGTGCTTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SSLSFLISSSCCSCI*ATRSRHRWSPCFSS
Trigger: CGAGCTGAAGCACGGGGACCAGCGGTGTCGGGAGCGCGTGGCCCAGATGCAGGAGCAGCACGAACTGGAGATCAAGAAACTCAAAGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp GTTCGGCCTCACTTGCCTTCTGGGCTCGTTTCTGTTGTTCCTGAATaGCTGCCTGCCTGGCCTGACGAGCCTTTTCCTCCCGGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: VRPHLPSGLVSVVPE*LPAWPDEPFPPGPS
Trigger: AGAAGGCCCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGAACAACAGAAACGAGCCCAGAAGGCAAGTGAGGCCGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106227.8
CDS CCA 90 bp CGGCCTCACTTGCCTTCTGGGCTCGTTTCTGTTGTTCTACCTGAATaGCTGCCTGCCTGGCCTGACGAGCCTTTTCCTCCCGGGCCTTCT +
Preference number: 5 (lower is better)
Translates to: RPHLPSGLVSVVLPE*LPAWPDEPFPPGPS
Trigger: AGAAGGCCCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGTAGAACAACAGAAACGAGCCCAGAAGGCAAGTGAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCTGTGTTCGGCCTCACTaGCCTTCTGGGCTCGTTTCT +
Preference number: 5 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVCVRPH*PSGLVS
Trigger: AGAAACGAGCCCAGAAGGCAAGTGAGGCCGAACACA...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGTGGATGTCCTGTGGCTaGTCCTCTGGAGACTGCCAT +
Preference number: 5 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLWMSCG*SSGDCH
Trigger: ATGGCAGTCTCCAGAGGACAAGCCACAGGACATCCA...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCCTGGGCTCGTTTCTGTaGTTCCTGAATGGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVLGSFL*FLNGCL
Trigger: CAGGCAGCCATTCAGGAACAACAGAAACGAGCCCAG...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106227.8
CDS TCA 90 bp TGGCAGCGGTACCAGCGCTGGATGGTAACTGCAGCCTGGTTTACCTaGTGGATGAACCTCTCGGCTTCCTCTTCAGTCACCTCCCTCCGC +
Preference number: 5 (lower is better)
Translates to: WQRYQRWMVTAAWFT*WMNLSASSSVTSLR
Trigger: GCGGAGGGAGGTGACTGAAGAGGAAGCCGAGAGGTTCATCCATCAGGTAAACCAGGCTGCAGTTACCATCCAGCGCTGGTACCGCTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp TCGGCGCCTCTGTACCTGGCAGCGGTACCAGCGCTGGATGGTAACTaGAGCCTGGTTTACCTGATGGATGAACCTCTCGGCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: SAPLYLAAVPALDGN*SLVYLMDEPLGFLF
Trigger: GAAGAGGAAGCCGAGAGGTTCATCCATCAGGTAAACCAGGCTGCAGTTACCATCCAGCGCTGGTACCGCTGCCAGGTACAGAGGCGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp TGCCGTTGGATGGTGGCCTCATACTGCTCCTTCTGCTGCCGCAGCTaGCGGGTCAGCTCCTTCTCTGTCTCCTTAACACGTCGAACAGTG +
Preference number: 5 (lower is better)
Translates to: CRWMVASYCSFCCRS*RVSSFSVSLTRRTV
Trigger: CACTGTTCGACGTGTTAAGGAGACAGAGAAGGAGCTGACCCGGCAGCTGCGGCAGCAGAAGGAGCAGTATGAGGCCACCATCCAACGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp TCGGTGGCACTCATGAGTTCTTTGAGTTTCTTGATCTCCAGTTCGTaGTGCTCCTGCATCTGGGCCACGCGCTCCCGACACCGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: SVALMSSLSFLISSS*CSCIWATRSRHRWS
Trigger: GGACCAGCGGTGTCGGGAGCGCGTGGCCCAGATGCAGGAGCAGCACGAACTGGAGATCAAGAAACTCAAAGAACTCATGAGTGCCACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp CCTTCTGGGCTCGTTTCTGTTGTAGTACCTGAATGGCTGCCTGCCTaGCCTGACGAGCCTTTTCCTCCCGGGCCTTCTTCCTTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: PSGLVSVVVPEWLPA*PDEPFPPGPSSLLP
Trigger: AGGCAGCAAGGAAGAAGGCCCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGTACTACAACAGAAACGAGCCCAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106229.8
CDS CCA 90 bp TTGCCTTCTGGGCTCGTTTCTGTTGTTCCTGAATGGCTGCCTGCCTaGCCTGACGAGCCTTTTCCTCCCGGGCCTTCTTCCTTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: LPSGLVSVVPEWLPA*PDEPFPPGPSSLLP
Trigger: AGGCAGCAAGGAAGAAGGCCCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGAACAACAGAAACGAGCCCAGAAGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106227.8
CDS CCA 90 bp CCTTCTGGGCTCGTTTCTGTTGTTCTACCTGAATGGCTGCCTGCCTaGCCTGACGAGCCTTTTCCTCCCGGGCCTTCTTCCTTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: PSGLVSVVLPEWLPA*PDEPFPPGPSSLLP
Trigger: AGGCAGCAAGGAAGAAGGCCCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGTAGAACAACAGAAACGAGCCCAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGATGGTGGTGACACAGTaGCCCACAGCACCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLMVVTQ*PTAPLL
Trigger: CAACAAAGGTGCTGTGGGCAACTGTGTCACCACCAT...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCATGGTGGTGACACAGTaGCCCACAGCACCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVMVVTQ*PTAPLL
Trigger: CAACAAAGGTGCTGTGGGCAACTGTGTCACCACCAT...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGGCTGCCTTCACAATATaGTTGAGGGAGGGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQAAFTI*LREGAV
Trigger: GACAGCCCCCTCCCTCAACAATATTGTGAAGGCAGC...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACATGTGTTCGGCCTCACTaGCCTTCTGGGCTCGTTTCT +
Preference number: 5 (lower is better)
Translates to: RHADSNVPGTGLHGASHTCVRPH*PSGLVS
Trigger: AGAAACGAGCCCAGAAGGCAAGTGAGGCCGAACACA...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATGTGTTCGGCCTCACTaGCCTTCTGGGCTCGTTTCT +
Preference number: 5 (lower is better)
Translates to: HADSNVPGTGLHGASHTPCVRPH*PSGLVS
Trigger: AGAAACGAGCCCAGAAGGCAAGTGAGGCCGAACACA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCATGGATGTCCTGTGGCTaGTCCTCTGGAGACTGCCAT +
Preference number: 5 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAAWMSCG*SSGDCH
Trigger: ATGGCAGTCTCCAGAGGACAAGCCACAGGACATCCA...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp AGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGAAGGACAAGTGCCGTaGGATGGTGGCCTCATACTG +
Preference number: 5 (lower is better)
Translates to: SCCPTLSPVSWSVTWTPAEGQVP*DGGLIL
Trigger: CAGTATGAGGCCACCATCCAACGGCACTTGTCCTTC...GGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS TCA 90 bp CGCTCTCCTCCTTGGCCAGTGTCATATCGGCCTCCAGCCGGTGGATaGCCAACTCAATCTCCTGGTCTCGGCCTTTTCGGATCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RSPPWPVSYRPPAGG*PTQSPGLGLFGSLP
Trigger: AGGAAGAGATCCGAAAAGGCCGAGACCAGGAGATTGAGTTGGTCATCCACCGGCTGGAGGCCGATATGACACTGGCCAAGGAGGAGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp TTTTCGGATCTCTTCCTTCAGCTCACGTTCCCTGGTCAGCAGCCATaGTTCCTCCTTCTTGGCACAGCTGGCCACCCACGCCTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: FSDLFLQLTFPGQQP*FLLLGTAGHPRLSL
Trigger: GAGAGACAGGCGTGGGTGGCCAGCTGTGCCAAGAAGGAGGAAGCATGGCTGCTGACCAGGGAACGTGAGCTGAAGGAAGAGATCCGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp CTCACTTGCCTTCTGGGCTCGTTTCTGTTGTTCTACCTGAATGGCTaGCTGCCTGGCCTGACGAGCCTTTTCCTCCCGGGCCTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LTCLLGSFLLFYLNG*LPGLTSLFLPGLLP
Trigger: AGGAAGAAGGCCCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGTAGAACAACAGAAACGAGCCCAGAAGGCAAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180242.2
CDS CCA 90 bp CTCTCGCTCTCCTCCTTGGCCAGTGTCATATCGGCCTCCAGCCGGTaGATGACCAACTCAATCTCCTGGTCTCGGCCTTTTCGGATCTCT +
Preference number: 5 (lower is better)
Translates to: LSLSSLASVISASSR*MTNSISWSRPFRIS
Trigger: AGAGATCCGAAAAGGCCGAGACCAGGAGATTGAGTTGGTCATCCACCGGCTGGAGGCCGATATGACACTGGCCAAGGAGGAGAGCGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGGCTGCCTTCACAATATaGTTGAGGGAGGGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWAAFTI*LREGAV
Trigger: GACAGCCCCCTCCCTCAACAATATTGTGAAGGCAGC...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGGAAGGACAAGTGCCGTaGGATGGTGGCCTCATACTG +
Preference number: 5 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWEGQVP*DGGLIL
Trigger: CAGTATGAGGCCACCATCCAACGGCACTTGTCCTTC...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 90 bp CTCTGTTTCATACTTATCACGCACACGCTTCACACGGCTCTCGGCTaGTCTCTCGCTCTCCTCCTTGGCCAGTGTCATATCGGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LCFILITHTLHTALG*SLALLLGQCHIGLQ
Trigger: CTGGAGGCCGATATGACACTGGCCAAGGAGGAGAGCGAGAGAGCAGCCGAGAGCCGTGTGAAGCGTGTGCGTGATAAGTATGAAACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGATGGTGGTGACACAGTaGCCCACAGCACCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWMVVTQ*PTAPLL
Trigger: CAACAAAGGTGCTGTGGGCAACTGTGTCACCACCAT...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCTTCTTCGTTTTCTCATaGATCCACTTCTCACGCCGG +
Preference number: 5 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVFFVFS*IHFSRR
Trigger: CCGGCGTGAGAAGTGGATCAATGAGAAAACGAAGAA...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp AGTGTCATATCGGCCTCCAGCCGGTGGATGACCAACTCAATCTCCTaGTCTCGGCCTTTTCGGATCTCTTCCTTCAGCTCACGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: SVISASSRWMTNSIS*SRPFRISSFSSRSL
Trigger: CAGGGAACGTGAGCTGAAGGAAGAGATCCGAAAAGGCCGAGACCAGGAGATTGAGTTGGTCATCCACCGGCTGGAGGCCGATATGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp GGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACTCGCTCAGAACTTTCTaGTCTTCAATCAGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: GMLTVTSRALGSMVPLTHSLRTF*SSISWS
Trigger: TGACCAGCTGATTGAAGACAAGAAAGTTCTGAGCGA...GTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp AGGCATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACATTCTTCGTTTTCTCATaGATCCACTTCTCACGCCGG +
Preference number: 5 (lower is better)
Translates to: RHADSNVPGTGLHGASHTFFVFS*IHFSRR
Trigger: CCGGCGTGAGAAGTGGATCAATGAGAAAACGAAGAA...TGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp AGGAAGTCGGTGGGCTCTGCTGGCCTGGGGGAGCCCGTCCATGACTaGTTGACCTGTGTAGTGCTGTTAGATCTTCGAAGATTGTTGATA +
Preference number: 5 (lower is better)
Translates to: RKSVGSAGLGEPVHD*LTCVVLLDLRRLLI
Trigger: TATCAACAATCTTCGAAGATCTAACAGCACTACACAGGTCAACCAGTCATGGACGGGCTCCCCCAGGCCAGCAGAGCCCACCGACTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp ACTTTCTTGTCTTCAATCAGCTGGTCAATGAAGGACAAGTGCCGTTaGATGGTGGCCTCATACTGCTCCTTCTGCTGCCGCAGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: TFLSSISWSMKDKCR*MVASYCSFCCRSCR
Trigger: CCGGCAGCTGCGGCAGCAGAAGGAGCAGTATGAGGCCACCATCCAACGGCACTTGTCCTTCATTGACCAGCTGATTGAAGACAAGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp CATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCATCGCTCAGAACTTTCTaGTCTTCAATCAGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: HADSNVPGTGLHGASHTPSLRTF*SSISWS
Trigger: TGACCAGCTGATTGAAGACAAGAAAGTTCTGAGCGA...TGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGTCGCTCAGAACTTTCTaGTCTTCAATCAGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQSLRTF*SSISWS
Trigger: TGACCAGCTGATTGAAGACAAGAAAGTTCTGAGCGA...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCGCACTCATGAGTTCTTaGAGTTTCTTGATCTCCAGT +
Preference number: 5 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVALMSS*SFLISS
Trigger: ACTGGAGATCAAGAAACTCAAAGAACTCATGAGTGC...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp CTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGGCACTCATGAGTTCTTaGAGTTTCTTGATCTCCAGT +
Preference number: 5 (lower is better)
Translates to: LTVTSRALGSMVPLTHQLALMSS*SFLISS
Trigger: ACTGGAGATCAAGAAACTCAAAGAACTCATGAGTGC...CAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGTTCTTCGTTTTCTCATaGATCCACTTCTCACGCCGG +
Preference number: 5 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWFFVFS*IHFSRR
Trigger: CCGGCGTGAGAAGTGGATCAATGAGAAAACGAAGAA...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp TGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACACCAGCCGCAACCTCTTGCTTGTGCTaGGCAATTAGTTTCTGGATC +
Preference number: 5 (lower is better)
Translates to: CCPTLSPVSWSVTWTPAATSCLC*AISFWI
Trigger: GATCCAGAAACTAATTGCCAAGCACAAGCAAGAGGT...TGCGGCTGGTGTCCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp AGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGCTGTCCTGACTGTGATTTCCTaGATCTTCTTCGTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: SNVPGTGLHGASHTPAAVLTVIS*IFFVFS
Trigger: TGAGAAAACGAAGAAGATCAAGGAAATCACAGTCAG...GACAGCAGCTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp TCACACACCAGCTGCTGTCCTACCCTTAGCCCTGTGTCTTGGAGCGTGACCTGGACCTCTTGCTTGTGCTaGGCAATTAGTTTCTGGATC +
Preference number: 5 (lower is better)
Translates to: SHTSCCPTLSPVSWSVTWTSCLC*AISFWI
Trigger: GATCCAGAAACTAATTGCCAAGCACAAGCAAGAGGT...CCAGGTCACGCTCCAAGACACAGGGCTAAGGGTAGGACAGCAGCTGGTGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS-3UTR CAA 90 bp ATGCTGACAGTAACGTCCCGGGCACTGGGCTCCATGGTGCCTCTCACACACCAGCTGACTGTGATTTCCTaGATCTTCTTCGTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: MLTVTSRALGSMVPLTHQLTVIS*IFFVFS
Trigger: TGAGAAAACGAAGAAGATCAAGGAAATCACAGTCAG...CTGGTGTGTGAGAGGCACCATGGAGCCCAGTGCCCGGGACGTTACTGTCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp CCCCTGAGCCGCCTCACCTCTTGCTTGTGCTTGGCAATTAGTTTCTaGATCTCAGGCTCTAGACCTCTGACTGTGATTTCCTTGATCTTC +
Preference number: 5 (lower is better)
Translates to: PLSRLTSCLCLAISF*ISGSRPLTVISLIF
Trigger: GAAGATCAAGGAAATCACAGTCAGAGGTCTAGAGCCTGAGATCCAGAAACTAATTGCCAAGCACAAGCAAGAGGTGAGGCGGCTCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 90 bp ACTGCCTCACACTTCTCGCTCAGAACTTTCTTGTCTTCAATCAGCTaGTCAATGAAGGACAAGTGCCGTTGGATGGTGGCCTCATACTGC +
Preference number: 5 (lower is better)
Translates to: TASHFSLRTFLSSIS*SMKDKCRWMVASYC
Trigger: GCAGTATGAGGCCACCATCCAACGGCACTTGTCCTTCATTGACCAGCTGATTGAAGACAAGAAAGTTCTGAGCGAGAAGTGTGAGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS TCA 72 bp CTCTCCCGGTCCAGGTGCTGCCGCAGCTCTTCCGCCTaGCGCAGGTGGCGCTGTGCGGCCTGCTCTTCACGC +
Preference number: 6 (lower is better)
Translates to: LSRSRCCRSSSA*RRWRCAACSSR
Trigger: GCGTGAAGAGCAGGCCGCACAGCGCCACCTGCGTCAGGCGGAAGAGCTGCGGCAGCACCTGGACCGGGAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp TGCTGCTCAAACCTCTGCTGGGCGCGCTCCCGCTCCTaGTGGCCCAGCACCTCCCTCTCCCGGTCCAGGTGC +
Preference number: 6 (lower is better)
Translates to: CCSNLCWARSRS*WPSTSLSRSRC
Trigger: GCACCTGGACCGGGAGAGGGAGGTGCTGGGCCAGCAGGAGCGGGAGCGCGCCCAGCAGAGGTTTGAGCAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp TGCTCCTGCATCTGGGCCACGCGCTCCCGACACCGCTaGTCCCCGTGCTTCAGCTCGGCCACCACTGCCTCA +
Preference number: 6 (lower is better)
Translates to: CSCIWATRSRHR*SPCFSSATTAS
Trigger: TGAGGCAGTGGTGGCCGAGCTGAAGCACGGGGACCAGCGGTGTCGGGAGCGCGTGGCCCAGATGCAGGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CAA 90 bp TCCAGAAGGTTCCCACCTCCCAACCGTTGCCTCTGCCCCTCTCGCTaGGACGCTAGCAGGTGCTCGAGGGCTGCTGCTCCCGCTCGGCGC +
Preference number: 6 (lower is better)
Translates to: SRRFPPPNRCLCPSR*DASRCSRAAAPARR
Trigger: GCGCCGAGCGGGAGCAGCAGCCCTCGAGCACCTGCTAGCGTCCAAGCGAGAGGGGCAGAGGCAACGGTTGGGAGGTGGGAACCTTCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS TCA 72 bp TCCCCCAGGCGGCCTTTCAGCTCCGAGCACCGCTCCTaGAGCTTCCGCTCCGACTGCTCCAGCTCCGAGAGC +
Preference number: 6 (lower is better)
Translates to: SPRRPFSSEHRS*SFRSDCSSSES
Trigger: GCTCTCGGAGCTGGAGCAGTCGGAGCGGAAGCTTCAGGAGCGGTGCTCGGAGCTGAAAGGCCGCCTGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp ATCTGGGCCACGCGCTCCCGACACCGCTGGTCCCCGTaGTTCAGCTCGGCCACCACTGCCTCACACTTCTCG +
Preference number: 6 (lower is better)
Translates to: IWATRSRHRWSP*FSSATTASHFS
Trigger: CGAGAAGTGTGAGGCAGTGGTGGCCGAGCTGAAGCACGGGGACCAGCGGTGTCGGGAGCGCGTGGCCCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp CGCTGCTGCTCCAGTGCCCTCTGTTCCTGCTCCAGGTaGTGCTCAAACCTCTGCTGGGCGCGCTCCCGCTCC +
Preference number: 6 (lower is better)
Translates to: RCCSSALCSCSR*CSNLCWARSRS
Trigger: GGAGCGGGAGCGCGCCCAGCAGAGGTTTGAGCAGCACCTGGAGCAGGAACAGAGGGCACTGGAGCAGCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp AGTCGCCGCCGCTGCTGCTCCAGTGCCCTCTGTTCCTaGTCCAGGTGCTGCTCAAACCTCTGCTGGGCGCGC +
Preference number: 6 (lower is better)
Translates to: SRRRCCSSALCS*SRCCSNLCWAR
Trigger: GCGCGCCCAGCAGAGGTTTGAGCAGCACCTGGAGCAGGAACAGAGGGCACTGGAGCAGCAGCGGCGGCGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp TCCCACCTCCCAACCGTTGCCTCTGCCCCTCTCGCTTaGACGCTAGCAGGTGCTCGAGGGCTGCTGCTCCCG +
Preference number: 6 (lower is better)
Translates to: SHLPTVASAPLA*TLAGARGLLLP
Trigger: CGGGAGCAGCAGCCCTCGAGCACCTGCTAGCGTCCAAGCGAGAGGGGCAGAGGCAACGGTTGGGAGGTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp GCAGCCTGGCTCCTGCATGGGTCGAGGCTGCTCCGGTaGTCGGGTCTCTGGTCTGTCCTTAGGCCGTCTGTG +
Preference number: 6 (lower is better)
Translates to: AAWLLHGSRLLR*SGLWSVLRPSV
Trigger: CACAGACGGCCTAAGGACAGACCAGAGACCCGAGCACCGGAGCAGCCTCGACCCATGCAGGAGCCAGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp TGCTGCTCCAGTGCCCTCTGTTCCTGCTCCAGGTGCTaGTCAAACCTCTGCTGGGCGCGCTCCCGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: CCSSALCSCSRC*SNLCWARSRSC
Trigger: GCAGGAGCGGGAGCGCGCCCAGCAGAGGTTTGAGCAGCACCTGGAGCAGGAACAGAGGGCACTGGAGCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp CGGTGCACCTCGTCTAGCTCCACCTGCTGGCGGGCCTaGAGCTCTGCGAGCTCCACTTTCACCCTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: RCTSSSSTCWRA*SSASSTFTLWV
Trigger: GACCCAGAGGGTGAAAGTGGAGCTCGCAGAGCTGCAGGCCCGCCAGCAGGTGGAGCTAGACGAGGTGCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp TGTGTGACGCAGCCTGGCTCCTGCATGGGTCGAGGCTaGTCCGGTGCTCGGGTCTCTGGTCTGTCCTTAGGC +
Preference number: 6 (lower is better)
Translates to: CVTQPGSCMGRG*SGARVSGLSLG
Trigger: GCCTAAGGACAGACCAGAGACCCGAGCACCGGAGCAGCCTCGACCCATGCAGGAGCCAGGCTGCGTCACACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp CCTGCCGTACCACCTGGGCCAGGCTGGCCCGCTCACTaGACATCTGTGTGTTCACCGCCCGCAGGTCTTCTA +
Preference number: 6 (lower is better)
Translates to: PAVPPGPGWPAH*TSVCSPPAGLL
Trigger: TAGAAGACCTGCGGGCGGTGAACACACAGATGTGCAGTGAGCGGGCCAGCCTGGCCCAGGTGGTACGGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp GTCTTCACCCTCCGGTGCACCTCGTCTAGCTCCACCTaGTGGCGGGCCTGCAGCTCTGCGAGCTCCACTTTC +
Preference number: 6 (lower is better)
Translates to: VFTLRCTSSSST*WRACSSASSTF
Trigger: GAAAGTGGAGCTCGCAGAGCTGCAGGCCCGCCAGCAGGTGGAGCTAGACGAGGTGCACCGGAGGGTGAAGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp ACCTTGTGGCAGAGGCACTGCCGGGCCGCTGGGACATaGGCGGAGGGAGGCCAATCAGACTCAAGTCCACAG +
Preference number: 6 (lower is better)
Translates to: TLWQRHCRAAGT*AEGGQSDSSPQ
Trigger: CTGTGGACTTGAGTCTGATTGGCCTCCCTCCGCCCATGTCCCAGCGGCCCGGCAGTGCCTCTGCCACAAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp CCTTCCTCCGTGGGCCCAAGGCAGAGTCAAGGGTGCTaGGACTCTGAGCACTGGCTGGCAAAGCCAAGCCCC +
Preference number: 6 (lower is better)
Translates to: PSSVGPRQSQGC*DSEHWLAKPSP
Trigger: GGGGCTTGGCTTTGCCAGCCAGTGCTCAGAGTCCCAGCACCCTTGACTCTGCCTTGGGCCCACGGAGGAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp ACCAGCGTTGTTGGCCTTAGGGTGTGTGACGCAGCCTaGCTCCTGCATGGGTCGAGGCTGCTCCGGTGCTCG +
Preference number: 6 (lower is better)
Translates to: TSVVGLRVCDAA*LLHGSRLLRCS
Trigger: CGAGCACCGGAGCAGCCTCGACCCATGCAGGAGCCAGGCTGCGTCACACACCCTAAGGCCAACAACGCTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp GCTGCCAGCTGCTCTGCAAACTCCTGCCGTACCACCTaGGCCAGGCTGGCCCGCTCACTGCACATCTGTGTG +
Preference number: 6 (lower is better)
Translates to: AASCSANSCRTT*ARLARSLHICV
Trigger: CACACAGATGTGCAGTGAGCGGGCCAGCCTGGCCCAGGTGGTACGGCAGGAGTTTGCAGAGCAGCTGGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp TTCACCCTCCGGTGCACCTCGTCTAGCTCCACCTGCTaGCGGGCCTGCAGCTCTGCGAGCTCCACTTTCACC +
Preference number: 6 (lower is better)
Translates to: FTLRCTSSSSTC*RACSSASSTFT
Trigger: GGTGAAAGTGGAGCTCGCAGAGCTGCAGGCCCGCCAGCAGGTGGAGCTAGACGAGGTGCACCGGAGGGTGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp TTGTTGGCCTTAGGGTGTGTGACGCAGCCTGGCTCCTaGATGGGTCGAGGCTGCTCCGGTGCTCGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: LLALGCVTQPGS*MGRGCSGARVS
Trigger: AGAGACCCGAGCACCGGAGCAGCCTCGACCCATGCAGGAGCCAGGCTGCGTCACACACCCTAAGGCCAACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp CTGCATGGGTCGAGGCTGCTCCGGTGCTCGGGTCTCTaGTCTGTCCTTAGGCCGTCTGTGTTCGGCCTCACT +
Preference number: 6 (lower is better)
Translates to: LHGSRLLRCSGL*SVLRPSVFGLT
Trigger: AGTGAGGCCGAACACAGACGGCCTAAGGACAGACCAGAGACCCGAGCACCGGAGCAGCCTCGACCCATGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp ACTCCTTCCTCCGTGGGCCCAAGGCAGAGTCAAGGGTaGTGGGACTCTGAGCACTGGCTGGCAAAGCCAAGC +
Preference number: 6 (lower is better)
Translates to: TPSSVGPRQSQG*WDSEHWLAKPS
Trigger: GCTTGGCTTTGCCAGCCAGTGCTCAGAGTCCCAGCACCCTTGACTCTGCCTTGGGCCCACGGAGGAAGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp CCCCAAGTCGCTGCCCTCACCTCCCTCACGGGCTGCTaGCTTCACAATATTGTTGAGGGAGGGGGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: PQVAALTSLTGC*LHNIVEGGGCL
Trigger: CAGACAGCCCCCTCCCTCAACAATATTGTGAAGGCAGCAGCCCGTGAGGGAGGTGAGGGCAGCGACTTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp GGCCTGACGAGCCTTTTCCTCCCGGGCCTTCTTCCTTaGTGCCTCCTCCTGCCGGTGCAGTTCCAGAAGGTT +
Preference number: 6 (lower is better)
Translates to: GLTSLFLPGLLP*CLLLPVQFQKV
Trigger: AACCTTCTGGAACTGCACCGGCAGGAGGAGGCAGCAAGGAAGAAGGCCCGGGAGGAAAAGGCTCGTCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp TCTCCTCCAGCTCCAGCTTCAGCCGCATCACAGACGTaGTTCCCTCGGATCCTGAGCCCGCCTCTAGCACCA +
Preference number: 6 (lower is better)
Translates to: SPPAPASAASQT*FPRILSPPLAP
Trigger: TGGTGCTAGAGGCGGGCTCAGGATCCGAGGGAAGCACGTCTGTGATGCGGCTGAAGCTGGAGCTGGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp TGGGACTCTGAGCACTGGCTGGCAAAGCCAAGCCCCTaGGCTGCTCATCCAGGACGTTCCACGTGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: WDSEHWLAKPSP*AAHPGRSTWLP
Trigger: AGGAAGCCACGTGGAACGTCCTGGATGAGCAGCCCAGGGGCTTGGCTTTGCCAGCCAGTGCTCAGAGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp GATCGTCCAGGGTTGCTCTGGCCCTGGCCTTGCCCCTaGAAGAGCCTGACACTGCCAGGTCTTGTCTGGCTT +
Preference number: 6 (lower is better)
Translates to: DRPGLLWPWPCP*KSLTLPGLVWL
Trigger: AAGCCAGACAAGACCTGGCAGTGTCAGGCTCTTCCAGGGGCAAGGCCAGGGCCAGAGCAACCCTGGACGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp GTGTGTCCAGAAGATCGTCCAGGGTTGCTCTGGCCCTaGCCTTGCCCCTGGAAGAGCCTGACACTGCCAGGT +
Preference number: 6 (lower is better)
Translates to: VCPEDRPGLLWP*PCPWKSLTLPG
Trigger: ACCTGGCAGTGTCAGGCTCTTCCAGGGGCAAGGCCAGGGCCAGAGCAACCCTGGACGATCTTCTGGACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS TCA 72 bp CTTCACGCTGCTGCAGCTCAGCCTCGTGCAGGCCCCTaGGCCGCCTCACCTCTTGCTTGTGCTTGGCAATTA +
Preference number: 6 (lower is better)
Translates to: LHAAAAQPRAGP*AASPLACAWQL
Trigger: TAATTGCCAAGCACAAGCAAGAGGTGAGGCGGCTCAGGGGCCTGCACGAGGCTGAGCTGCAGCAGCGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp CTTCCCCAAGTCGCTGCCCTCACCTCCCTCACGGGCTaGTGCCTTCACAATATTGTTGAGGGAGGGGGCTGT +
Preference number: 6 (lower is better)
Translates to: LPQVAALTSLTG*CLHNIVEGGGC
Trigger: ACAGCCCCCTCCCTCAACAATATTGTGAAGGCAGCAGCCCGTGAGGGAGGTGAGGGCAGCGACTTGGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp ATGAAGGACAAGTGCCGTTGGATGGTGGCCTCATACTaGTCCTTCTGCTGCCGCAGCTGCCGGGTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: MKDKCRWMVASY*SFCCRSCRVSS
Trigger: GGAGCTGACCCGGCAGCTGCGGCAGCAGAAGGAGCAGTATGAGGCCACCATCCAACGGCACTTGTCCTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp TCCTCTAGGTGGTCCGCCCGCTTCACAGCAGCCTCATaGTGTTTGCGGAGACTGTTCACGGCTGCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SSRWSARFTAAS*CLRRLFTAASF
Trigger: GAAGGAGGCAGCCGTGAACAGTCTCCGCAAACAGCATGAGGCTGCTGTGAAGCGGGCGGACCACCTAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp TGCCTTCTGGGCTCGTTTCTGTTGTTCCTGAATGGCTaGCTGCCTGGCCTGACGAGCCTTTTCCTCCCGGGC +
Preference number: 6 (lower is better)
Translates to: CLLGSFLLFLNG*LPGLTSLFLPG
Trigger: GCCCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGAACAACAGAAACGAGCCCAGAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106227.8
CDS CCA 72 bp AAAATAGACCTTGTGGCAGAGGCACTGCCGGGCCGCTaGGACATGGGCGGAGGGAGGCCAATCAGACTCAAG +
Preference number: 6 (lower is better)
Translates to: KIDLVAEALPGR*DMGGGRPIRLK
Trigger: CTTGAGTCTGATTGGCCTCCCTCCGCCCATGTCCCAGCGGCCCGGCAGTGCCTCTGCCACAAGGTCTATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp GGGCTCGTTTCTGTTGTTCCTGAATGGCTGCCTGCCTaGCCTGACGAGCCTTTTCCTCCCGGGCCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: GLVSVVPEWLPA*PDEPFPPGPSS
Trigger: GGAAGAAGGCCCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGAACAACAGAAACGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106227.8
CDS GCA 72 bp ACCTTTGTTGCTCCTGTTGTTAGCGGTGAAGCTGGGTaGCAGAGGACACTCCTTCCTCCGTGGGCCCAAGGC +
Preference number: 6 (lower is better)
Translates to: TFVAPVVSGEAG*QRTLLPPWAQG
Trigger: GCCTTGGGCCCACGGAGGAAGGAGTGTCCTCTGGCACCCAGCTTCACCGCTAACAACAGGAGCAACAAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp CACTGGACAAATTCTTCCGAGGCTTCCCCAAGTCGCTaGCCTCACCTCCCTCACGGGCTGCTGCCTTCACAA +
Preference number: 6 (lower is better)
Translates to: HWTNSSEASPSR*PHLPHGLLPSQ
Trigger: TTGTGAAGGCAGCAGCCCGTGAGGGAGGTGAGGGCAGCGACTTGGGGAAGCCTCGGAAGAATTTGTCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp CTTCTGGGCTCGTTTCTGTTGTTCTACCTGAATGGCTaGCTGCCTGGCCTGACGAGCCTTTTCCTCCCGGGC +
Preference number: 6 (lower is better)
Translates to: LLGSFLLFYLNG*LPGLTSLFLPG
Trigger: GCCCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGTAGAACAACAGAAACGAGCCCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180242.2
CDS CCA 72 bp GAGCCTGACACTGCCAGGTCTTGTCTGGCTTCCCCCTaGGAATGGATGTCCTGTGGCTTGTCCTCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: EPDTARSCLASP*EWMSCGLSSGD
Trigger: GTCTCCAGAGGACAAGCCACAGGACATCCATTCCCAGGGGGAAGCCAGACAAGACCTGGCAGTGTCAGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp TGCCCCTGGAAGAGCCTGACACTGCCAGGTCTTGTCTaGCTTCCCCCTGGGAATGGATGTCCTGTGGCTTGT +
Preference number: 6 (lower is better)
Translates to: CPWKSLTLPGLV*LPPGNGCPVAC
Trigger: ACAAGCCACAGGACATCCATTCCCAGGGGGAAGCCAGACAAGACCTGGCAGTGTCAGGCTCTTCCAGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CAA 90 bp TGCTCATCCAGGACGTTCCACGTGGCTTCCTTCTCACTGGATGCCTaGCTAAGACTGGCCACCCTTCTTCTCCCACTGGTGCTGCCCTCA +
Preference number: 6 (lower is better)
Translates to: CSSRTFHVASFSLDA*LRLATLLLPLVLPS
Trigger: TGAGGGCAGCACCAGTGGGAGAAGAAGGGTGGCCAGTCTTAGCAAGGCATCCAGTGAGAAGGAAGCCACGTGGAACGTCCTGGATGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS TCA 72 bp CCTTGGCCAGTGTCATATCGGCCTCCAGCCGGTGGATaGCCAACTCAATCTCCTGGTCTCGGCCTTTTCGGA +
Preference number: 6 (lower is better)
Translates to: PWPVSYRPPAGG*PTQSPGLGLFG
Trigger: TCCGAAAAGGCCGAGACCAGGAGATTGAGTTGGTCATCCACCGGCTGGAGGCCGATATGACACTGGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp CTGTACCTGGCAGCGGTACCAGCGCTGGATGGTAACTaGAGCCTGGTTTACCTGATGGATGAACCTCTCGGC +
Preference number: 6 (lower is better)
Translates to: LYLAAVPALDGN*SLVYLMDEPLG
Trigger: GCCGAGAGGTTCATCCATCAGGTAAACCAGGCTGCAGTTACCATCCAGCGCTGGTACCGCTGCCAGGTACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp ATGGTGGCCTCATACTGCTCCTTCTGCTGCCGCAGCTaGCGGGTCAGCTCCTTCTCTGTCTCCTTAACACGT +
Preference number: 6 (lower is better)
Translates to: MVASYCSFCCRS*RVSSFSVSLTR
Trigger: ACGTGTTAAGGAGACAGAGAAGGAGCTGACCCGGCAGCTGCGGCAGCAGAAGGAGCAGTATGAGGCCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp TCAGCCTCGTGCAGGCCCCTGAGCCGCCTCACCTCTTaGTTGTGCTTGGCAATTAGTTTCTGGATCTCAGGC +
Preference number: 6 (lower is better)
Translates to: SASCRPLSRLTS*LCLAISFWISG
Trigger: GCCTGAGATCCAGAAACTAATTGCCAAGCACAAGCAAGAGGTGAGGCGGCTCAGGGGCCTGCACGAGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp GTGGGCTCTGCTGGCCTGGGGGAGCCCGTCCATGACTaGTTGACCTGTGTAGTGCTGTTAGATCTTCGAAGA +
Preference number: 6 (lower is better)
Translates to: VGSAGLGEPVHD*LTCVVLLDLRR
Trigger: TCTTCGAAGATCTAACAGCACTACACAGGTCAACCAGTCATGGACGGGCTCCCCCAGGCCAGCAGAGCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp CTCGTTTCTGTTGTAGTACCTGAATGGCTGCCTGCCTaGCCTGACGAGCCTTTTCCTCCCGGGCCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: LVSVVVPEWLPA*PDEPFPPGPSS
Trigger: GGAAGAAGGCCCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGTACTACAACAGAAACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106229.8
CDS CCA 72 bp GACACTGCCAGGTCTTGTCTGGCTTCCCCCTGGGAATaGATGTCCTGTGGCTTGTCCTCTGGAGACTGCCAT +
Preference number: 6 (lower is better)
Translates to: DTARSCLASPWE*MSCGLSSGDCH
Trigger: ATGGCAGTCTCCAGAGGACAAGCCACAGGACATCCATTCCCAGGGGGAAGCCAGACAAGACCTGGCAGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp CACTTGCCTTCTGGGCTCGTTTCTGTTGTTCCTGAATaGCTGCCTGCCTGGCCTGACGAGCCTTTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: HLPSGLVSVVPE*LPAWPDEPFPP
Trigger: GGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGAACAACAGAAACGAGCCCAGAAGGCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106227.8
CDS CCA 72 bp CTCGTTTCTGTTGTTCTACCTGAATGGCTGCCTGCCTaGCCTGACGAGCCTTTTCCTCCCGGGCCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: LVSVVLPEWLPA*PDEPFPPGPSS
Trigger: GGAAGAAGGCCCGGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGTAGAACAACAGAAACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180242.2
CDS CAA 72 bp GCCTCGTGCAGGCCCCTGAGCCGCCTCACCTCTTGCTaGTGCTTGGCAATTAGTTTCTGGATCTCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: ASCRPLSRLTSC*CLAISFWISGS
Trigger: AGAGCCTGAGATCCAGAAACTAATTGCCAAGCACAAGCAAGAGGTGAGGCGGCTCAGGGGCCTGCACGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CAA 72 bp GTGTTCGGCCTCACTTGCCTTCTGGGCTCGTTTCTGTaGTTCTACCTGAATGGCTGCCTGCCTGGCCTGACG +
Preference number: 6 (lower is better)
Translates to: VFGLTCLLGSFL*FYLNGCLPGLT
Trigger: CGTCAGGCCAGGCAGGCAGCCATTCAGGTAGAACAACAGAAACGAGCCCAGAAGGCAAGTGAGGCCGAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180242.2
CDS CAA 90 bp ACCATGGTGGTGACACAGTTGCCCACAGCACCTTTGTTGCTCCTGTaGTTAGCGGTGAAGCTGGGTGCCAGAGGACACTCCTTCCTCCGT +
Preference number: 6 (lower is better)
Translates to: TMVVTQLPTAPLLLL*LAVKLGARGHSFLR
Trigger: ACGGAGGAAGGAGTGTCCTCTGGCACCCAGCTTCACCGCTAACAACAGGAGCAACAAAGGTGCTGTGGGCAACTGTGTCACCACCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CAA 90 bp GCCAGGTCTTGTCTGGCTTCCCCCTGGGAATGGATGTCCTGTGGCTaGTCCTCTGGAGACTGCCATTGCTCTGGAGATGATTCAGAGGCA +
Preference number: 6 (lower is better)
Translates to: ARSCLASPWEWMSCG*SSGDCHCSGDDSEA
Trigger: TGCCTCTGAATCATCTCCAGAGCAATGGCAGTCTCCAGAGGACAAGCCACAGGACATCCATTCCCAGGGGGAAGCCAGACAAGACCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CAA 90 bp TCAGCCTCGTGCAGGCCCCTGAGCCGCCTCACCTCTTGCTTGTGCTaGGCAATTAGTTTCTGGATCTCAGGCTCTAGACCTCTGACTGTG +
Preference number: 6 (lower is better)
Translates to: SASCRPLSRLTSCLC*AISFWISGSRPLTV
Trigger: CACAGTCAGAGGTCTAGAGCCTGAGATCCAGAAACTAATTGCCAAGCACAAGCAAGAGGTGAGGCGGCTCAGGGGCCTGCACGAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp TTGCCTTCTGGGCTCGTTTCTGTTGTAGTACCTGAATaGCTGCCTGCCTGGCCTGACGAGCCTTTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: LPSGLVSVVVPE*LPAWPDEPFPP
Trigger: GGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGTACTACAACAGAAACGAGCCCAGAAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106229.8
CDS CCA 72 bp GTCTTGTCTGGCTTCCCCCTGGGAATGGATGTCCTGTaGCTTGTCCTCTGGAGACTGCCATTGCTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: VLSGFPLGMDVL*LVLWRLPLLWR
Trigger: TCTCCAGAGCAATGGCAGTCTCCAGAGGACAAGCCACAGGACATCCATTCCCAGGGGGAAGCCAGACAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp TCGGCCTCCAGCCGGTGGATGACCAACTCAATCTCCTaGTCTCGGCCTTTTCGGATCTCTTCCTTCAGCTCA +
Preference number: 6 (lower is better)
Translates to: SASSRWMTNSIS*SRPFRISSFSS
Trigger: TGAGCTGAAGGAAGAGATCCGAAAAGGCCGAGACCAGGAGATTGAGTTGGTCATCCACCGGCTGGAGGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp TTGCCTTCTGGGCTCGTTTCTGTTGTTCTACCTGAATaGCTGCCTGCCTGGCCTGACGAGCCTTTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: LPSGLVSVVLPE*LPAWPDEPFPP
Trigger: GGGAGGAAAAGGCTCGTCAGGCCAGGCAGGCAGCCATTCAGGTAGAACAACAGAAACGAGCCCAGAAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180242.2
CDS CAA 72 bp GGCTCTGCTGGCCTGGGGGAGCCCGTCCATGACTGGTaGACCTGTGTAGTGCTGTTAGATCTTCGAAGATTG +
Preference number: 6 (lower is better)
Translates to: GSAGLGEPVHDW*TCVVLLDLRRL
Trigger: CAATCTTCGAAGATCTAACAGCACTACACAGGTCAACCAGTCATGGACGGGCTCCCCCAGGCCAGCAGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CAA 90 bp GTCCATGACTGGTTGACCTGTGTAGTGCTGTTAGATCTTCGAAGATaGTTGATAGCTCGGGGGCCTCCAGGTCCAGTGGCCTCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: VHDWLTCVVLLDLRR*LIARGPPGPVASSA
Trigger: GGCACTGGAGGCCACTGGACCTGGAGGCCCCCGAGCTATCAACAATCTTCGAAGATCTAACAGCACTACACAGGTCAACCAGTCATGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CAA 90 bp TCACGCCGGATTTTCTCGGTGGCACTCATGAGTTCTTTGAGTTTCTaGATCTCCAGTTCGTGCTGCTCCTGCATCTGGGCCACGCGCTCC +
Preference number: 6 (lower is better)
Translates to: SRRIFSVALMSSLSF*ISSSCCSCIWATRS
Trigger: GGAGCGCGTGGCCCAGATGCAGGAGCAGCACGAACTGGAGATCAAGAAACTCAAAGAACTCATGAGTGCCACCGAGAAAATCCGGCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp ATCCAGGACGTTCCACGTGGCTTCCTTCTCACTGGATaGCTTGCTAAGACTGGCCACCCTTCTTCTCCCACT +
Preference number: 6 (lower is better)
Translates to: IQDVPRGFLLTG*LAKTGHPSSPT
Trigger: AGTGGGAGAAGAAGGGTGGCCAGTCTTAGCAAGGCATCCAGTGAGAAGGAAGCCACGTGGAACGTCCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp CTCATGAGTTCTTTGAGTTTCTTGATCTCCAGTTCGTaGTGCTCCTGCATCTGGGCCACGCGCTCCCGACAC +
Preference number: 6 (lower is better)
Translates to: LMSSLSFLISSS*CSCIWATRSRH
Trigger: GTGTCGGGAGCGCGTGGCCCAGATGCAGGAGCAGCACGAACTGGAGATCAAGAAACTCAAAGAACTCATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp TCGTGCAGGCCCCTGAGCCGCCTCACCTCTTGCTTGTaGTTGGCAATTAGTTTCTGGATCTCAGGCTCTAGA +
Preference number: 6 (lower is better)
Translates to: SCRPLSRLTSCL*LAISFWISGSR
Trigger: TCTAGAGCCTGAGATCCAGAAACTAATTGCCAAGCACAAGCAAGAGGTGAGGCGGCTCAGGGGCCTGCACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp TGGTCTGTCCTTAGGCCGTCTGTGTTCGGCCTCACTTaGCTTCTGGGCTCGTTTCTGTTGTTCCTGAATGGC +
Preference number: 6 (lower is better)
Translates to: WSVLRPSVFGLT*LLGSFLLFLNG
Trigger: GCCATTCAGGAACAACAGAAACGAGCCCAGAAGGCAAGTGAGGCCGAACACAGACGGCCTAAGGACAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106227.8
CDS CAA 72 bp TGTCTGGCTTCCCCCTGGGAATGGATGTCCTGTGGCTaGTCCTCTGGAGACTGCCATTGCTCTGGAGATGAT +
Preference number: 6 (lower is better)
Translates to: CLASPWEWMSCG*SSGDCHCSGDD
Trigger: ATCATCTCCAGAGCAATGGCAGTCTCCAGAGGACAAGCCACAGGACATCCATTCCCAGGGGGAAGCCAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CAA 72 bp TGCAGGCCCCTGAGCCGCCTCACCTCTTGCTTGTGCTaGGCAATTAGTTTCTGGATCTCAGGCTCTAGACCT +
Preference number: 6 (lower is better)
Translates to: CRPLSRLTSCLC*AISFWISGSRP
Trigger: AGGTCTAGAGCCTGAGATCCAGAAACTAATTGCCAAGCACAAGCAAGAGGTGAGGCGGCTCAGGGGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CAA 90 bp AAGTCGGTGGGCTCTGCTGGCCTGGGGGAGCCCGTCCATGACTGGTaGACCTGTGTAGTGCTGTTAGATCTTCGAAGATTGTTGATAGCT +
Preference number: 6 (lower is better)
Translates to: KSVGSAGLGEPVHDW*TCVVLLDLRRLLIA
Trigger: AGCTATCAACAATCTTCGAAGATCTAACAGCACTACACAGGTCAACCAGTCATGGACGGGCTCCCCCAGGCCAGCAGAGCCCACCGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS TCA 72 bp TACCAGCGCTGGATGGTAACTGCAGCCTGGTTTACCTaGTGGATGAACCTCTCGGCTTCCTCTTCAGTCACC +
Preference number: 6 (lower is better)
Translates to: YQRWMVTAAWFT*WMNLSASSSVT
Trigger: GGTGACTGAAGAGGAAGCCGAGAGGTTCATCCATCAGGTAAACCAGGCTGCAGTTACCATCCAGCGCTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS TCA 72 bp GACTTCTCCATCTCATCCAGGAAGGTCATAATGCTCTaGAGCTTGGCCTCCGAGAGCAGGGTCCCGTCATCA +
Preference number: 6 (lower is better)
Translates to: DFSISSRKVIML*SLASESRVPSS
Trigger: TGATGACGGGACCCTGCTCTCGGAGGCCAAGCTTCAGAGCATTATGACCTTCCTGGATGAGATGGAGAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp TCTTCAATCAGCTGGTCAATGAAGGACAAGTGCCGTTaGATGGTGGCCTCATACTGCTCCTTCTGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: SSISWSMKDKCR*MVASYCSFCCR
Trigger: GCGGCAGCAGAAGGAGCAGTATGAGGCCACCATCCAACGGCACTTGTCCTTCATTGACCAGCTGATTGAAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CAA 72 bp GTCTTCAATCAGCTGGTCAATGAAGGACAAGTGCCGTaGGATGGTGGCCTCATACTGCTCCTTCTGCTGCCG +
Preference number: 6 (lower is better)
Translates to: VFNQLVNEGQVP*DGGLILLLLLP
Trigger: CGGCAGCAGAAGGAGCAGTATGAGGCCACCATCCAACGGCACTTGTCCTTCATTGACCAGCTGATTGAAGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CAA 90 bp CATGACTGGTTGACCTGTGTAGTGCTGTTAGATCTTCGAAGATTGTaGATAGCTCGGGGGCCTCCAGGTCCAGTGGCCTCCAGTGCCTTT +
Preference number: 6 (lower is better)
Translates to: HDWLTCVVLLDLRRL*IARGPPGPVASSAF
Trigger: AAAGGCACTGGAGGCCACTGGACCTGGAGGCCCCCGAGCTATCAACAATCTTCGAAGATCTAACAGCACTACACAGGTCAACCAGTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CAA 90 bp AACTTTCTTGTCTTCAATCAGCTGGTCAATGAAGGACAAGTGCCGTaGGATGGTGGCCTCATACTGCTCCTTCTGCTGCCGCAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: NFLVFNQLVNEGQVP*DGGLILLLLLPQLP
Trigger: CGGCAGCTGCGGCAGCAGAAGGAGCAGTATGAGGCCACCATCCAACGGCACTTGTCCTTCATTGACCAGCTGATTGAAGACAAGAAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS TCA 72 bp TCTTCGAGGAGGCATAGTGGTTATGCACCATGGTGGTaGCACAGTTGCCCACAGCACCTTTGTTGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: SSRRHSGYAPWW*HSCPQHLCCSC
Trigger: ACAGGAGCAACAAAGGTGCTGTGGGCAACTGTGTCACCACCATGGTGCATAACCACTATGCCTCCTCGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp TGGTCTGTCCTTAGGCCGTCTGTGTTCGGCCTCACTTaGCTTCTGGGCTCGTTTCTGTTGTTCTACCTGAAT +
Preference number: 6 (lower is better)
Translates to: WSVLRPSVFGLT*LLGSFLLFYLN
Trigger: ATTCAGGTAGAACAACAGAAACGAGCCCAGAAGGCAAGTGAGGCCGAACACAGACGGCCTAAGGACAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180242.2
CDS CCA 72 bp TCCCAAACTTCTCCAGGTTGTCAGCTGTCAGGGAGTTaGCATCCTCTTCCTCGTCAGTCCAGGCATATCTGT +
Preference number: 6 (lower is better)
Translates to: SQTSPGCQLSGS*HPLPRQSRHIC
Trigger: ACAGATATGCCTGGACTGACGAGGAAGAGGATGCCAACTCCCTGACAGCTGACAACCTGGAGAAGTTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS GCA 72 bp TTCTTGTCTTCAATCAGCTGGTCAATGAAGGACAAGTaGCGTTGGATGGTGGCCTCATACTGCTCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: FLSSISWSMKDK*RWMVASYCSFC
Trigger: GCAGAAGGAGCAGTATGAGGCCACCATCCAACGGCACTTGTCCTTCATTGACCAGCTGATTGAAGACAAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CCA 72 bp CGCCTCACCTCTTGCTTGTGCTTGGCAATTAGTTTCTaGATCTCAGGCTCTAGACCTCTGACTGTGATTTCC +
Preference number: 6 (lower is better)
Translates to: RLTSCLCLAISF*ISGSRPLTVIS
Trigger: GGAAATCACAGTCAGAGGTCTAGAGCCTGAGATCCAGAAACTAATTGCCAAGCACAAGCAAGAGGTGAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CAA 72 bp GCCACCACTGCCTCACACTTCTCGCTCAGAACTTTCTaGTCTTCAATCAGCTGGTCAATGAAGGACAAGTGC +
Preference number: 6 (lower is better)
Translates to: ATTASHFSLRTF*SSISWSMKDKC
Trigger: GCACTTGTCCTTCATTGACCAGCTGATTGAAGACAAGAAAGTTCTGAGCGAGAAGTGTGAGGCAGTGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CAA 72 bp ATTTTCTCGGTGGCACTCATGAGTTCTTTGAGTTTCTaGATCTCCAGTTCGTGCTGCTCCTGCATCTGGGCC +
Preference number: 6 (lower is better)
Translates to: IFSVALMSSLSF*ISSSCCSCIWA
Trigger: GGCCCAGATGCAGGAGCAGCACGAACTGGAGATCAAGAAACTCAAAGAACTCATGAGTGCCACCGAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2
CDS CAA 90 bp TCTAGACCTCTGACTGTGATTTCCTTGATCTTCTTCGTTTTCTCATaGATCCACTTCTCACGCCGGATTTTCTCGGTGGCACTCATGAGT +
Preference number: 6 (lower is better)
Translates to: SRPLTVISLIFFVFS*IHFSRRIFSVALMS
Trigger: ACTCATGAGTGCCACCGAGAAAATCCGGCGTGAGAAGTGGATCAATGAGAAAACGAAGAAGATCAAGGAAATCACAGTCAGAGGTCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000106227.8
ENSMUST00000106229.8
ENSMUST00000180242.2