RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP128 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000061533

Ensembl transcript IDs: ENSMUST00000140674.2, ENSMUST00000141429.8, ENSMUST00000143415.8

Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCTACAGCGTGGATCCCACTAAGTATATAAGGATTCCTACAGAGTaGATGCCACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCAGA +
Preference number: 1 (lower is better)
Translates to: SYSVDPTKYIRIPTE*MPLSQERGVGMEVR
Trigger: TCTGACCTCCATCCCAACACCCCTCTCTTGGCTCAGTGGCATCCACTCTGTAGGAATCCTTATATACTTAGTGGGATCCACGCTGTAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR CCA 90 bp AGGAATTGCTTTATTGTTCCTGCCTCGGTGCAGGTCTTTCCACCATaGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCA +
Preference number: 1 (lower is better)
Translates to: RNCFIVPASVQVFPP*PSRTQFQDDDHYSA
Trigger: TGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCATGGTGGAAAGACCTGCACCGAGGCAGGAACAATAAAGCAATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR CCA 90 bp ATTTGCCTGGAGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTaGAAAGGCATCAATTATAAATTCAAGGTTGGGTTGGAAAATTGT +
Preference number: 1 (lower is better)
Translates to: ICLEGIPSPPCSQSS*KGINYKFKVGLENC
Trigger: ACAATTTTCCAACCCAACCTTGAATTTATAATTGATGCCTTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCTCCAGGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR CCA 90 bp ATTCCTACAGAGTGGATGCCACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCCAGGTCTTTCCACCATaGCCCAGTAGGACTCAGTTT +
Preference number: 2 (lower is better)
Translates to: IPTEWMPLSQERGVGMEVQVFPP*PSRTQF
Trigger: AAACTGAGTCCTACTGGGCCATGGTGGAAAGACCTG...GACCTCCATCCCAACACCCCTCTCTTGGCTCAGTGGCATCCACTCTGTAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR GCA 90 bp ATTCCTACAGAGTGGATGCCACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCCACTGTGTACAGATGTaGCTGAATCTAAACTGCTGG +
Preference number: 2 (lower is better)
Translates to: IPTEWMPLSQERGVGMEVHCVQM*LNLNCW
Trigger: CCAGCAGTTTAGATTCAGGCACATCTGTACACAGTG...GACCTCCATCCCAACACCCCTCTCTTGGCTCAGTGGCATCCACTCTGTAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR CCA 90 bp ATTCCTACAGAGTGGATGCCACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCCTGAATCTAAACTGCTaGAAACATTTGCCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: IPTEWMPLSQERGVGMEVLNLNC*KHLPGG
Trigger: CCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAG...GACCTCCATCCCAACACCCCTCTCTTGGCTCAGTGGCATCCACTCTGTAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR CCA 90 bp GGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGATCCCACTATGCTAGTCCACACTTaGCACTTCCAAGGAGCTGAA +
Preference number: 2 (lower is better)
Translates to: GQSGRTKGYKDSYRVDPTMLVHT*HFQGAE
Trigger: TTCAGCTCCTTGGAAGTGCCAAGTGTGGACTAGCAT...AGTGGGATCCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR CCA 90 bp CTTATAAAGGAATTGCTTTATTGTTCCTGCCTCGGTGCAGGTCTTTCCACCATGGACAGGAAGCGACTGTaGTCCTGGCAAGAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: LIKELLYCSCLGAGLSTMDRKRL*SWQEEE
Trigger: CTCCTCCTCTTGCCAGGACCACAGTCGCTTCCTGTC...CATGGTGGAAAGACCTGCACCGAGGCAGGAACAATAAAGCAATTCCTTTATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
3UTR-3UTR TCA 90 bp ACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCAGAGCAAGACCATCCAGAGTGGGAGAAAGCAATTATaGATTCACTGTGTACAGATG +
Preference number: 2 (lower is better)
Translates to: TEPREGCWDGGQSKTIQSGRKQL*IHCVQM
Trigger: CATCTGTACACAGTGAATTCATAATTGCTTTCTCCC...ACTCTGGATGGTCTTGCTCTGACCTCCATCCCAACACCCCTCTCTTGGCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR TCA 90 bp ATTCCTACAGAGTGGATGCCACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCACAAAACATGACACTTaGTTGGGGAGAAAGCAATTA +
Preference number: 2 (lower is better)
Translates to: IPTEWMPLSQERGVGMEVTKHDT*LGRKQL
Trigger: TAATTGCTTTCTCCCCAATCAAGTGTCATGTTTTGT...GACCTCCATCCCAACACCCCTCTCTTGGCTCAGTGGCATCCACTCTGTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR TCA 90 bp CTTATAAAGGAATTGCTTTATTGTTCCTGCCTCGGTGCAGGTCTTTCCACCATGGCACTTCCAAGGAGCTaGAGCCACACGATGTCTTTA +
Preference number: 2 (lower is better)
Translates to: LIKELLYCSCLGAGLSTMALPRS*SHTMSL
Trigger: TAAAGACATCGTGTGGCTTCAGCTCCTTGGAAGTGC...CATGGTGGAAAGACCTGCACCGAGGCAGGAACAATAAAGCAATTCCTTTATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR CCA 90 bp ACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCAGAGCAAGACCATCCAGAGTAACATGACACTTGATTaGGGAGAAAGCAATTATGAA +
Preference number: 2 (lower is better)
Translates to: TEPREGCWDGGQSKTIQSNMTLD*GESNYE
Trigger: TTCATAATTGCTTTCTCCCCAATCAAGTGTCATGTT...ACTCTGGATGGTCTTGCTCTGACCTCCATCCCAACACCCCTCTCTTGGCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR CCA 90 bp AGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAAGGCATCAATTATAATGCTAGTCCACACTTaGCACTTCCAAGGAGCTGAA +
Preference number: 2 (lower is better)
Translates to: RESLLLLVASHLGKASIIMLVHT*HFQGAE
Trigger: TTCAGCTCCTTGGAAGTGCCAAGTGTGGACTAGCAT...TATAATTGATGCCTTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR TCA 90 bp AAAAGCACATTGATGTTGAAAAGGCTGGGATGTGGAGGGCAGTCAGGTAGGACCACAAAACATGACACTTaGTTGGGGAGAAAGCAATTA +
Preference number: 2 (lower is better)
Translates to: KSTLMLKRLGCGGQSGRTTKHDT*LGRKQL
Trigger: TAATTGCTTTCTCCCCAATCAAGTGTCATGTTTTGT...GGTCCTACCTGACTGCCCTCCACATCCCAGCCTTTTCAACATCAATGTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR CCA 90 bp GGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGATCCCACTAATTCAAGGTTGGGTTaGAAAATTGTGACACAGAAA +
Preference number: 2 (lower is better)
Translates to: GQSGRTKGYKDSYRVDPTNSRLG*KIVTQK
Trigger: TTTCTGTGTCACAATTTTCCAACCCAACCTTGAATT...AGTGGGATCCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR CCA 90 bp AGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAAGGCATCAATTATACTCCTTCTTAGACTGTaGACTTGTTCCATTTGCTGG +
Preference number: 2 (lower is better)
Translates to: RESLLLLVASHLGKASIILLLRL*TCSICW
Trigger: CCAGCAAATGGAACAAGTCCACAGTCTAAGAAGGAG...TATAATTGATGCCTTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
3UTR-3UTR CCA 90 bp AAAAGCACATTGATGTTGAAAAGGCTGGGATGTGGAGGGCAGTCAGGTAGGACCAATTCAAGGTTGGGTTaGAAAATTGTGACACAGAAA +
Preference number: 2 (lower is better)
Translates to: KSTLMLKRLGCGGQSGRTNSRLG*KIVTQK
Trigger: TTTCTGTGTCACAATTTTCCAACCCAACCTTGAATT...GGTCCTACCTGACTGCCCTCCACATCCCAGCCTTTTCAACATCAATGTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR TCA 90 bp CGGCTGTTACTTGTGAAATACTCAAGTGAAGTCGCAAATCACTTTTTGTATTTTGCACTTCCAAGGAGCTaGAGCCACACGATGTCTTTA +
Preference number: 2 (lower is better)
Translates to: RLLLVKYSSEVANHFLYFALPRS*SHTMSL
Trigger: TAAAGACATCGTGTGGCTTCAGCTCCTTGGAAGTGC...AAAATACAAAAAGTGATTTGCGACTTCACTTGAGTATTTCACAAGTAACAGCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
3UTR-3UTR TCA 90 bp CGGCTGTTACTTGTGAAATACTCAAGTGAAGTCGCAAATCACTTTTTGTATTTTTACTGGCAAGGAGTGTaGAAACTGTGGACTAGACAG +
Preference number: 2 (lower is better)
Translates to: RLLLVKYSSEVANHFLYFYWQGV*KLWTRQ
Trigger: CTGTCTAGTCCACAGTTTTCACACTCCTTGCCAGTA...AAAATACAAAAAGTGATTTGCGACTTCACTTGAGTATTTCACAAGTAACAGCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
3UTR CCA 72 bp GTGGATCCCACTAAGTATATAAGGATTCCTACAGAGTaGATGCCACTGAGCCAAGAGAGGGGTGTTGGGATG +
Preference number: 3 (lower is better)
Translates to: VDPTKYIRIPTE*MPLSQERGVGM
Trigger: CATCCCAACACCCCTCTCTTGGCTCAGTGGCATCCACTCTGTAGGAATCCTTATATACTTAGTGGGATCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR CCA 72 bp GATGTGCCTGAATCTAAACTGCTGGAAACATTTGCCTaGAGGGAATCCCTTCTCCTCCTTGTAGCCAGTCAT +
Preference number: 3 (lower is better)
Translates to: DVPESKLLETFA*RESLLLLVASH
Trigger: ATGACTGGCTACAAGGAGGAGAAGGGATTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR CAA 90 bp GATGTGGAGGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGAAAAGCACATTGATGTaGAAAAGGCTGGGATGTGGA +
Preference number: 3 (lower is better)
Translates to: DVEGSQVGPKDIRTPTEWKSTLM*KRLGCG
Trigger: TCCACATCCCAGCCTTTTCAACATCAATGTGCTTTT...CCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCCTCCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR CAA 90 bp GGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGATCCCACTCACTTTTTGTATTTTTaGATCTCGTGTTCCTCCTTC +
Preference number: 3 (lower is better)
Translates to: GQSGRTKGYKDSYRVDPTHFLYF*ISCSSF
Trigger: GAAGGAGGAACACGAGATCAAAAAATACAAAAAGTG...AGTGGGATCCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
3UTR CCA 72 bp GAGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTaGAAAGGCATCAATTATAAATTCAAGGTTGGGTTG +
Preference number: 3 (lower is better)
Translates to: EGIPSPPCSQSS*KGINYKFKVGL
Trigger: CAACCCAACCTTGAATTTATAATTGATGCCTTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR CAA 90 bp AGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAAGGCATCAATTATAATATACTGCTTTCAGTaGATAGTACCCCCACAAGTT +
Preference number: 3 (lower is better)
Translates to: RESLLLLVASHLGKASIIIYCFQ*IVPPQV
Trigger: AACTTGTGGGGGTACTATCAACTGAAAGCAGTATAT...TATAATTGATGCCTTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR TCA 72 bp TATTCCACAGGCACCTCCACAACAGGTTACAAAACATaGCACTTGATTGGGGAGAAAGCAATTATGAATTCA +
Preference number: 3 (lower is better)
Translates to: YSTGTSTTGYKT*HLIGEKAIMNS
Trigger: TGAATTCATAATTGCTTTCTCCCCAATCAAGTGTCATGTTTTGTAACCTGTTGTGGAGGTGCCTGTGGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR CAA 90 bp ATTATGAATTCACTGTGTACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTATATACTGCTTTCAGTaGATAGTACCCCCACAAGTT +
Preference number: 3 (lower is better)
Translates to: IMNSLCTDVPESKLLETFIYCFQ*IVPPQV
Trigger: AACTTGTGGGGGTACTATCAACTGAAAGCAGTATAT...AAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGTACACAGTGAATTCATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
3UTR-3UTR CAA 90 bp ATTATGAATTCACTGTGTACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTCTCTGCCAGTATGAGTaGCCTTTAAATGAGTTATAT +
Preference number: 3 (lower is better)
Translates to: IMNSLCTDVPESKLLETFLCQYE*PLNELY
Trigger: ATATAACTCATTTAAAGGCAACTCATACTGGCAGAG...AAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGTACACAGTGAATTCATAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp ATTCCTACAGAGTGGATGCCACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCCGCCCGCCTGTCCAGTaGTGTATTCGCGATAGCGCC +
Preference number: 4 (lower is better)
Translates to: IPTEWMPLSQERGVGMEVRPPVQ*CIRDSA
Trigger: GGCGCTATCGCGAATACAGCACTGGACAGGCGGGCG...GACCTCCATCCCAACACCCCTCTCTTGGCTCAGTGGCATCCACTCTGTAGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR TCA 90 bp ACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCAGAGCAAGACCATCCAGAGTCTCTCGCAGGGTCTCTaGCCTCTGGAACTCACTAAG +
Preference number: 4 (lower is better)
Translates to: TEPREGCWDGGQSKTIQSLSQGL*PLELTK
Trigger: CTTAGTGAGTTCCAGAGGTCAGAGACCCTGCGAGAG...ACTCTGGATGGTCTTGCTCTGACCTCCATCCCAACACCCCTCTCTTGGCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp GATGTGGAGGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGTGGACTCCTGGGCCTTaGCTTTCAGGTCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: DVEGSQVGPKDIRTPTEWWTPGP*LSGPPS
Trigger: GGAGGGAGGACCTGAAAGCCAAGGCCCAGGAGTCCA...CCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCCTCCACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp GGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGATCCCACTGCTTCCACTGCCGGATaGACTCCTGGGCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GQSGRTKGYKDSYRVDPTASTAG*TPGPWL
Trigger: AAGCCAAGGCCCAGGAGTCCATCCGGCAGTGGAAGC...AGTGGGATCCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp CTGTGTACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTGCCTGGAGGGAACTGCAGGCCGCCAGCTaGTGCCGCATGCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LCTDVPESKLLETFAWRELQAAS*CRMLLS
Trigger: AGAGAGGAGCATGCGGCAGCAGCTGGCGGCCTGCAG...TTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGTACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp AAAAGCACATTGATGTTGAAAAGGCTGGGATGTGGAGGGCAGTCAGGTAGGACCTGCCGGATGGACTCCTaGGCCTTGGCTTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KSTLMLKRLGCGGQSGRTCRMDS*ALAFRS
Trigger: GGACCTGAAAGCCAAGGCCCAGGAGTCCATCCGGCA...GGTCCTACCTGACTGCCCTCCACATCCCAGCCTTTTCAACATCAATGTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR TCA 90 bp AGCCACACGATGTCTTTAGATAATCTGAGCCGAATGGCAGTAAGGATCATCGGCGTGTTGACTCAGCTCTaGGAGCTGGAGGTCGGTCCG +
Preference number: 4 (lower is better)
Translates to: SHTMSLDNLSRMAVRIIGVLTQL*ELEVGP
Trigger: CGGACCGACCTCCAGCTCTCAGAGCTGAGTCAACAC...GCCGATGATCCTTACTGCCATTCGGCTCAGATTATCTAAAGACATCGTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR GCA 90 bp CCACCATGGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCATTCTGCTTCAGCTTCCACTaGCGGATGGACTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PPWPSRTQFQDDDHYSAFCFSFH*RMDSWA
Trigger: GGCCCAGGAGTCCATCCGGCAGTGGAAGCTGAAGCA...GAATGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCATGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp AAAAGCACATTGATGTTGAAAAGGCTGGGATGTGGAGGGCAGTCAGGTAGGACCTGGAGCTCCTCTTCCTaGAGGGCACGCTTGCTCAAG +
Preference number: 4 (lower is better)
Translates to: KSTLMLKRLGCGGQSGRTWSSSS*RARLLK
Trigger: CTTGAGCAAGCGTGCCCTGCAGGAAGAGGAGCTCCA...GGTCCTACCTGACTGCCCTCCACATCCCAGCCTTTTCAACATCAATGTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp ATTCCTACAGAGTGGATGCCACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCACCATCAAGGTCACTTaGACTCAGGCTGGTGACAGA +
Preference number: 4 (lower is better)
Translates to: IPTEWMPLSQERGVGMEVTIKVT*TQAGDR
Trigger: TCTGTCACCAGCCTGAGTGCAAGTGACCTTGATGGT...GACCTCCATCCCAACACCCCTCTCTTGGCTCAGTGGCATCCACTCTGTAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CCA 90 bp CCACCATGGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCATTCTGGACTCCTGGGCCTTaGCTTTCAGGTCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PPWPSRTQFQDDDHYSAFWTPGP*LSGPPS
Trigger: GGAGGGAGGACCTGAAAGCCAAGGCCCAGGAGTCCA...GAATGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCATGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp CCACCATGGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCATTCTGCCGGATGGACTCCTaGGCCTTGGCTTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PPWPSRTQFQDDDHYSAFCRMDS*ALAFRS
Trigger: GGACCTGAAAGCCAAGGCCCAGGAGTCCATCCGGCA...GAATGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCATGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp ACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCAGAGCAAGACCATCCAGAGTTGGATCTCCGTCAGTTaGTCCAACATCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TEPREGCWDGGQSKTIQSWISVS*SNICSC
Trigger: ACAGCTGCAGATGTTGGACCAACTGACGGAGATCCA...ACTCTGGATGGTCTTGCTCTGACCTCCATCCCAACACCCCTCTCTTGGCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR GCA 90 bp ACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCAGAGCAAGACCATCCAGAGTAACATCTGCAGCTGTTaGTTTTCCCGGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TEPREGCWDGGQSKTIQSNICSC*FSRFSK
Trigger: CTTGGAGAACCGGGAAAAGCAACAGCTGCAGATGTT...ACTCTGGATGGTCTTGCTCTGACCTCCATCCCAACACCCCTCTCTTGGCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CCA 90 bp GGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGATCCCACTCCTCTCTTCTCCTGGTaGAACTCCTCCAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GQSGRTKGYKDSYRVDPTPLFSW*NSSRSC
Trigger: ACAGCTTCTGGAGGAGTTCCACCAGGAGAAGAGAGG...AGTGGGATCCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR TCA 90 bp AGCCACACGATGTCTTTAGATAATCTGAGCCGAATGGCAGTAAGGATCATCGGCCTCTCGCAGGGTCTCTaGCCTCTGGAACTCACTAAG +
Preference number: 4 (lower is better)
Translates to: SHTMSLDNLSRMAVRIIGLSQGL*PLELTK
Trigger: CTTAGTGAGTTCCAGAGGTCAGAGACCCTGCGAGAG...GCCGATGATCCTTACTGCCATTCGGCTCAGATTATCTAAAGACATCGTGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR TCA 90 bp GATGTGGAGGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGGCTCAGAAAGGTCCCTaGACACAGCTTTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: DVEGSQVGPKDIRTPTEWAQKGP*TQLSWL
Trigger: AAGCCAAGAAAGCTGTGTTCAGGGACCTTTCTGAGC...CCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCCTCCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR TCA 90 bp ACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTGCCTGGAGGGAATCCCTTGCTTCCTCTGCGTGTTaGCTCAGCTCTGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TDVPESKLLETFAWRESLASSAC*LSSESW
Trigger: CCAGCTCTCAGAGCTGAGTCAACACGCAGAGGAAGC...AAGGGATTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR GCA 90 bp TGGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCATTCATTGGTTGCTTCAGCTTCCACTaGCGGATGGACTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: WPSRTQFQDDDHYSAFIGCFSFH*RMDSWA
Trigger: GGCCCAGGAGTCCATCCGGCAGTGGAAGCTGAAGCA...ACCAATGAATGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp ACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCAGAGCAAGACCATCCAGAGTTCCTCACACAGCCACTaGAGTTTAGTCTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: TEPREGCWDGGQSKTIQSSSHSH*SLVLLS
Trigger: TGAAAGCAAGACTAAACTGCAGTGGCTGTGTGAGGA...ACTCTGGATGGTCTTGCTCTGACCTCCATCCCAACACCCCTCTCTTGGCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp GGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGATCCCACTACTGCACTCGCAGATCTaGCATCTGCTTCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: GSQVGPKDIRTPTEWIPLLHSQI*HLLLQT
Trigger: AGTCTGGAGAAGCAGATGGCAGATCTGCGAGTGCAG...TAGTGGGATCCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CCA 90 bp AAGACTGCCTATAACATCATGCTAGTCCACACTTGGCACTTCCAAGGAGCTGAAGACAGGAAGCGACTGTaGTCCTGGCAAGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KTAYNIMLVHTWHFQGAEDRKRL*SWQEEE
Trigger: CTCCTCCTCTTGCCAGGACCACAGTCGCTTCCTGTC...TTCAGCTCCTTGGAAGTGCCAAGTGTGGACTAGCATGATGTTATAGGCAGTCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR TCA 90 bp GGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGATCCCACTACTATTGCTTTCAGATTaGCTCAGCAGCCTGCGTGAG +
Preference number: 4 (lower is better)
Translates to: GSQVGPKDIRTPTEWIPLLLLSD*LSSLRE
Trigger: CTCACGCAGGCTGCTGAGTCAATCTGAAAGCAATAG...TAGTGGGATCCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR TCA 90 bp AAAAGCACATTGATGTTGAAAAGGCTGGGATGTGGAGGGCAGTCAGGTAGGACCTCGCAGGTCTCAAAGTaGTTCTGGATCTCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: KSTLMLKRLGCGGQSGRTSQVSK*FWISVS
Trigger: ACTGACGGAGATCCAGAATCACTTTGAGACCTGCGA...GGTCCTACCTGACTGCCCTCCACATCCCAGCCTTTTCAACATCAATGTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR GCA 90 bp ATTCCTACAGAGTGGATGCCACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCGCATTTACACGGTCCTaGAGAGTTTCAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: IPTEWMPLSQERGVGMEVAFTRS*RVSTSS
Trigger: TGAAGAAGTTGAAACTCTGCAGGACCGTGTAAATGC...GACCTCCATCCCAACACCCCTCTCTTGGCTCAGTGGCATCCACTCTGTAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp CCACCATGGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCATTCAAATCCTCCTTTAACTaGCCAACAGCGCCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: PPWPSRTQFQDDDHYSAFKSSFN*PTAPAC
Trigger: ACAGGCGGGCGCTGTTGGGCAGTTAAAGGAGGATTT...GAATGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCATGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CCA 90 bp GGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGATCCCACTTGCTTCATCAGCTCCTaGATATTCTGCTCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GQSGRTKGYKDSYRVDPTCFISS*IFCSCF
Trigger: GAAGCACGAGCAGAATATCCAGGAGCTGATGAAGCA...AGTGGGATCCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp AACATTTGCCTGGAGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAACCTCTCTTCTCCTGGTaGAACTCCTCCAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: NICLEGIPSPPCSQSSWKPLFSW*NSSRSC
Trigger: ACAGCTTCTGGAGGAGTTCCACCAGGAGAAGAGAGG...TTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCTCCAGGCAAATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp AGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAAGGCATCAATTATAGGCACAGACTCCAGATaGTCCAAGGCCACTCGGGTA +
Preference number: 4 (lower is better)
Translates to: RESLLLLVASHLGKASIIGTDSR*SKATRV
Trigger: TACCCGAGTGGCCTTGGACCATCTGGAGTCTGTGCC...TATAATTGATGCCTTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp GATGTGGAGGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGCCCTTTGAAATGACCTaGTTGCCCATCGACTCAATC +
Preference number: 4 (lower is better)
Translates to: DVEGSQVGPKDIRTPTEWPFEMT*LPIDSI
Trigger: GATTGAGTCGATGGGCAACCAGGTCATTTCAAAGGG...CCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCCTCCACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CCA 90 bp AAAAGCACATTGATGTTGAAAAGGCTGGGATGTGGAGGGCAGTCAGGTAGGACCCTTCTAACACCCTTTTaGTTTCAGCGTCAGACCGGC +
Preference number: 4 (lower is better)
Translates to: KSTLMLKRLGCGGQSGRTLLTPF*FQRQTG
Trigger: GCCGGTCTGACGCTGAAACCAAAAGGGTGTTAGAAG...GGTCCTACCTGACTGCCCTCCACATCCCAGCCTTTTCAACATCAATGTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CCA 90 bp TGGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCATTCATTGGTCTCAGCTCTGAGAGCTaGAGGTCGGTCCGCTTACGA +
Preference number: 4 (lower is better)
Translates to: WPSRTQFQDDDHYSAFIGLSSES*RSVRLR
Trigger: TCGTAAGCGGACCGACCTCCAGCTCTCAGAGCTGAG...ACCAATGAATGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR TCA 90 bp ATTCCTACAGAGTGGATGCCACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCTTTCAGTTTCTCCAATaGGTCTCTGGAGAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: IPTEWMPLSQERGVGMEVFQFLQ*VSGESL
Trigger: AAGACTTTCTCCAGAGACTCATTGGAGAAACTGAAA...GACCTCCATCCCAACACCCCTCTCTTGGCTCAGTGGCATCCACTCTGTAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp GATGTGGAGGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGTTCTTGTTTCTTCAGTaGCTCCTGGAGCTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: DVEGSQVGPKDIRTPTEWFLFLQ*LLELQG
Trigger: TCCTTGAAGCTCCAGGAGGCACTGAAGAAACAAGAA...CCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCCTCCACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CCA 90 bp AACATTTGCCTGGAGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAATTCTTCTCCTTACAGTaGAGCTCCTCTTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NICLEGIPSPPCSQSSWKFFSLQ*SSSSCR
Trigger: CCTGCAGGAAGAGGAGCTCCACTGTAAGGAGAAGAA...TTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCTCCAGGCAAATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp AAAAGCACATTGATGTTGAAAAGGCTGGGATGTGGAGGGCAGTCAGGTAGGACCTCGAGTTCAGCTTGGTaGGACTCAATGTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: KSTLMLKRLGCGGQSGRTSSSAW*DSMSLS
Trigger: GCTCAATGACATTGAGTCCCACCAAGCTGAACTCGA...GGTCCTACCTGACTGCCCTCCACATCCCAGCCTTTTCAACATCAATGTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp TGCCTGAATCTAAACTGCTGGAAACATTTGCCTGGAGGGAATCCCTTCTCCTCCTGCTTCATCAGCTCCTaGATATTCTGCTCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: CLNLNCWKHLPGGNPFSSCFISS*IFCSCF
Trigger: GAAGCACGAGCAGAATATCCAGGAGCTGATGAAGCA...GGAGGAGAAGGGATTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp AAGACTGCCTATAACATCATGCTAGTCCACACTTGGCACTTCCAAGGAGCTGAATTCTTCAGTGCCTCCTaGAGCTTCAAGGACACGAGC +
Preference number: 4 (lower is better)
Translates to: KTAYNIMLVHTWHFQGAEFFSAS*SFKDTS
Trigger: GCTCGTGTCCTTGAAGCTCCAGGAGGCACTGAAGAA...TTCAGCTCCTTGGAAGTGCCAAGTGTGGACTAGCATGATGTTATAGGCAGTCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR TCA 90 bp AGCCACACGATGTCTTTAGATAATCTGAGCCGAATGGCAGTAAGGATCATCGGCACTTTGTCCTGGGACTaGCTCTTCTTGAGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: SHTMSLDNLSRMAVRIIGTLSWD*LFLSSV
Trigger: TACAGAGCTCAAGAAGAGTCAGTCCCAGGACAAAGT...GCCGATGATCCTTACTGCCATTCGGCTCAGATTATCTAAAGACATCGTGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp AAAAGCACATTGATGTTGAAAAGGCTGGGATGTGGAGGGCAGTCAGGTAGGACCATCTTCCAAGCTTTCTaGCTTCAGCATCCTGATGTG +
Preference number: 4 (lower is better)
Translates to: KSTLMLKRLGCGGQSGRTIFQAF*LQHPDV
Trigger: CACATCAGGATGCTGAAGGCAGAAAGCTTGGAAGAT...GGTCCTACCTGACTGCCCTCCACATCCCAGCCTTTTCAACATCAATGTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp ATTATGAATTCACTGTGTACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTCTGCAGGCCGCCAGCTaGTGCCGCATGCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: IMNSLCTDVPESKLLETFLQAAS*CRMLLS
Trigger: AGAGAGGAGCATGCGGCAGCAGCTGGCGGCCTGCAG...AAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGTACACAGTGAATTCATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp ACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCAGAGCAAGACCATCCAGAGTAGTTGGTTTATTGACTaGTCCAAATCCTCCTTTAAC +
Preference number: 4 (lower is better)
Translates to: TEPREGCWDGGQSKTIQSSWFID*SKSSFN
Trigger: GTTAAAGGAGGATTTGGAGCAGTCAATAAACCAACT...ACTCTGGATGGTCTTGCTCTGACCTCCATCCCAACACCCCTCTCTTGGCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR GCA 90 bp ACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTGCCTGGAGGGAATCCCTTCGCAGATCTGCCATCTaGTTCTCCAGACTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: TDVPESKLLETFAWRESLRRSAI*FSRLSF
Trigger: GAAACTGAGTCTGGAGAAGCAGATGGCAGATCTGCG...AAGGGATTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CCA 90 bp ATTCCTACAGAGTGGATGCCACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCCTCTCTTTTATAAACTaGTTGTTCTTCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: IPTEWMPLSQERGVGMEVLSFIN*LFFSVS
Trigger: GCTGACAGAGAAGAACAACCAGTTTATAAAAGAGAG...GACCTCCATCCCAACACCCCTCTCTTGGCTCAGTGGCATCCACTCTGTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp AACATTTGCCTGGAGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAATCGAGTTCAGCTTGGTaGGACTCAATGTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: NICLEGIPSPPCSQSSWKSSSAW*DSMSLS
Trigger: GCTCAATGACATTGAGTCCCACCAAGCTGAACTCGA...TTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCTCCAGGCAAATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp GATGTGGAGGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGCTATTACACCAAGAATaGATTCCTGTTCCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: DVEGSQVGPKDIRTPTEWLLHQE*IPVPSP
Trigger: TGGAGACGGAACAGGAATCCATTCTTGGTGTAATAG...CCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCCTCCACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp TGGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCATTCATTGGTAGCGTTGCTTTCTCCTaGTCCTTCCGTTCCATGCAC +
Preference number: 4 (lower is better)
Translates to: WPSRTQFQDDDHYSAFIGSVAFS*SFRSMH
Trigger: GTGCATGGAACGGAAGGACCAGGAGAAAGCAACGCT...ACCAATGAATGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR TCA 90 bp AACATTTGCCTGGAGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAAGGGACTCAATGTCATTaGGCTTCTTCTCCTTACAGT +
Preference number: 4 (lower is better)
Translates to: NICLEGIPSPPCSQSSWKGTQCH*ASSPYS
Trigger: ACTGTAAGGAGAAGAAGCTCAATGACATTGAGTCCC...TTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCTCCAGGCAAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR TCA 90 bp CCACCATGGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCATTCGGGACTCAATGTCATTaGGCTTCTTCTCCTTACAGT +
Preference number: 4 (lower is better)
Translates to: PPWPSRTQFQDDDHYSAFGTQCH*ASSPYS
Trigger: ACTGTAAGGAGAAGAAGCTCAATGACATTGAGTCCC...GAATGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCATGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR TCA 90 bp TGCCTGAATCTAAACTGCTGGAAACATTTGCCTGGAGGGAATCCCTTCTCCTCCGCCTTTATCTGGCTTTaGCTCTTACTCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CLNLNCWKHLPGGNPFSSAFIWL*LLLCLF
Trigger: GAAAAGACAGAGTAAGAGTCAAAGCCAGATAAAGGC...GGAGGAGAAGGGATTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR TCA 90 bp AGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAAGGCATCAATTATATGGCACTCAGGTCCTTaGTGGACTCTTGCATCTCAA +
Preference number: 4 (lower is better)
Translates to: RESLLLLVASHLGKASIIWHSGP*WTLASQ
Trigger: TTGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCA...TATAATTGATGCCTTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR TCA 90 bp CTTATAAAGGAATTGCTTTATTGTTCCTGCCTCGGTGCAGGTCTTTCCACCATGGCTCAGAAAGGTCCCTaGACACAGCTTTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LIKELLYCSCLGAGLSTMAQKGP*TQLSWL
Trigger: AAGCCAAGAAAGCTGTGTTCAGGGACCTTTCTGAGC...CATGGTGGAAAGACCTGCACCGAGGCAGGAACAATAAAGCAATTCCTTTATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR TCA 90 bp AGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAAGGCATCAATTATATCCAGCTCCCTCTGGTaGACGTCTCGTTCTAACTTT +
Preference number: 4 (lower is better)
Translates to: RESLLLLVASHLGKASIISSSLW*TSRSNF
Trigger: AAAGTTAGAACGAGACGTTCACCAGAGGGAGCTGGA...TATAATTGATGCCTTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR TCA 90 bp CTTATAAAGGAATTGCTTTATTGTTCCTGCCTCGGTGCAGGTCTTTCCACCATGAACTCCCCTTTGAAATaGCCTGGTTGCCCATCGACT +
Preference number: 4 (lower is better)
Translates to: LIKELLYCSCLGAGLSTMNSPLK*PGCPST
Trigger: AGTCGATGGGCAACCAGGTCATTTCAAAGGGGAGTT...CATGGTGGAAAGACCTGCACCGAGGCAGGAACAATAAAGCAATTCCTTTATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR TCA 90 bp AAGACTGCCTATAACATCATGCTAGTCCACACTTGGCACTTCCAAGGAGCTGAAGAAATGCAAGGTACTTaGTGCTGCAAACCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: KTAYNIMLVHTWHFQGAEEMQGT*CCKPLW
Trigger: CCAAAGGGGTTTGCAGCATCAAGTACCTTGCATTTC...TTCAGCTCCTTGGAAGTGCCAAGTGTGGACTAGCATGATGTTATAGGCAGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR GCA 90 bp CTTATAAAGGAATTGCTTTATTGTTCCTGCCTCGGTGCAGGTCTTTCCACCATGCGTTCCAACTTCTTATaGTTCAGCTTCCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: LIKELLYCSCLGAGLSTMRSNFL*FSFHCR
Trigger: CCGGCAGTGGAAGCTGAAGCATAAGAAGTTGGAACG...CATGGTGGAAAGACCTGCACCGAGGCAGGAACAATAAAGCAATTCCTTTATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp TGCCTGAATCTAAACTGCTGGAAACATTTGCCTGGAGGGAATCCCTTCTCCTCCTCCTTGATGGACTCTTaGATCTCAAGGAGTTTGACT +
Preference number: 4 (lower is better)
Translates to: CLNLNCWKHLPGGNPFSSSLMDS*ISRSLT
Trigger: AGTCAAACTCCTTGAGATGCAAGAGTCCATCAAGGA...GGAGGAGAAGGGATTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp AAGACTGCCTATAACATCATGCTAGTCCACACTTGGCACTTCCAAGGAGCTGAATTTATTAGCGAGATCTaGTCGGATGGCACTCAGGTC +
Preference number: 4 (lower is better)
Translates to: KTAYNIMLVHTWHFQGAEFISEI*SDGTQV
Trigger: GACCTGAGTGCCATCCGAGCAGATCTCGCTAATAAA...TTCAGCTCCTTGGAAGTGCCAAGTGTGGACTAGCATGATGTTATAGGCAGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp CTTATAAAGGAATTGCTTTATTGTTCCTGCCTCGGTGCAGGTCTTTCCACCATGTCCAGAAGCTGTTCCTaGCTCTCAATGTGCTCGAAC +
Preference number: 4 (lower is better)
Translates to: LIKELLYCSCLGAGLSTMSRSCS*LSMCSN
Trigger: GTTCGAGCACATTGAGAGGCAGGAACAGCTTCTGGA...CATGGTGGAAAGACCTGCACCGAGGCAGGAACAATAAAGCAATTCCTTTATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp GGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGATCCCACTACCTTTGGTCACCTTCTaGTTTGATAAGTTGTGTACG +
Preference number: 4 (lower is better)
Translates to: GSQVGPKDIRTPTEWIPLPLVTF*FDKLCT
Trigger: CGTACACAACTTATCAAAGCAGAAGGTGACCAAAGG...TAGTGGGATCCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR GCA 90 bp TGCCTGAATCTAAACTGCTGGAAACATTTGCCTGGAGGGAATCCCTTCTCCTCCATGGTTGCTTGGAAATaGAAGGTACTTGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: CLNLNCWKHLPGGNPFSSMVAWK*KVLDAA
Trigger: TGCAGCATCAAGTACCTTGCATTTCCAAGCAACCAT...GGAGGAGAAGGGATTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CCA 90 bp GATGTGGAGGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGTTCTCATTTTCAGTGTaGGTTAATTCCTCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: DVEGSQVGPKDIRTPTEWFSFSV*VNSSVS
Trigger: ACTGACGGAGGAATTAACCCACACTGAAAATGAGAA...CCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCCTCCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp CAGTTGATAGTACCCCCACAAGTTAAATTTATTCTCACTCACAAAGACTGCCTAGGCACAGACTCCAGATaGTCCAAGGCCACTCGGGTA +
Preference number: 4 (lower is better)
Translates to: QLIVPPQVKFILTHKDCLGTDSR*SKATRV
Trigger: TACCCGAGTGGCCTTGGACCATCTGGAGTCTGTGCC...TAGGCAGTCTTTGTGAGTGAGAATAAATTTAACTTGTGGGGGTACTATCAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp CCACCATGGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCATTCTGCTGCAAACCCCTTTaGTCACCTTCTGCTTTGATA +
Preference number: 4 (lower is better)
Translates to: PPWPSRTQFQDDDHYSAFCCKPL*SPSALI
Trigger: TATCAAAGCAGAAGGTGACCAAAGGGGTTTGCAGCA...GAATGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCATGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR TCA 90 bp AGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAAGGCATCAATTATAACTTTGTCCTGGGACTaGCTCTTCTTGAGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: RESLLLLVASHLGKASIITLSWD*LFLSSV
Trigger: TACAGAGCTCAAGAAGAGTCAGTCCCAGGACAAAGT...TATAATTGATGCCTTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp AAAAGCACATTGATGTTGAAAAGGCTGGGATGTGGAGGGCAGTCAGGTAGGACCTTCTCCTTCTTAAAGTaGTTCATCAGCTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: KSTLMLKRLGCGGQSGRTFSFLK*FISSWI
Trigger: TATCCAGGAGCTGATGAAGCACTTTAAGAAGGAGAA...GGTCCTACCTGACTGCCCTCCACATCCCAGCCTTTTCAACATCAATGTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp TGGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCATTCATTGGTAAGGCTGCACAAAGCTaGCTTTTCAGTTCATCCCTC +
Preference number: 4 (lower is better)
Translates to: WPSRTQFQDDDHYSAFIGKAAQS*LFSSSL
Trigger: GAGGGATGAACTGAAAAGCCAGCTTTGTGCAGCCTT...ACCAATGAATGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp AGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAAGGCATCAATTATAACCACGTCTGGCTTCTaGACTTCATTAAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RESLLLLVASHLGKASIITTSGF*TSLSFP
Trigger: TGGGAAGCTTAATGAAGTCCAGAAGCCAGACGTGGT...TATAATTGATGCCTTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CCA 90 bp ACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTGCCTGGAGGGAATCCCTTCTCCTTCTTAGACTGTaGACTTGTTCCATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TDVPESKLLETFAWRESLLLLRL*TCSICW
Trigger: CCAGCAAATGGAACAAGTCCACAGTCTAAGAAGGAG...AAGGGATTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR GCA 90 bp CTGTGTACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTGCCTGGAGGGAATCCTTGATGGACTCTTaGATCTCAAGGAGTTTGACT +
Preference number: 4 (lower is better)
Translates to: LCTDVPESKLLETFAWRESLMDS*ISRSLT
Trigger: AGTCAAACTCCTTGAGATGCAAGAGTCCATCAAGGA...TTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGTACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp CTGTGTACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTGCCTGGAGGGAATATGGTGTTGACCTTTaGGGTGACATCTACTGTAGA +
Preference number: 4 (lower is better)
Translates to: LCTDVPESKLLETFAWREYGVDL*GDIYCR
Trigger: TCTACAGTAGATGTCACCGCAAAGGTCAACACCATA...TTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGTACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR TCA 90 bp CAGTTGATAGTACCCCCACAAGTTAAATTTATTCTCACTCACAAAGACTGCCTATGTCGAGGGAATTCTTaGCCTCCAGTTCGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: QLIVPPQVKFILTHKDCLCRGNS*PPVRVQ
Trigger: CTGAACTCGAACTGGAGGTCAAGAATTCCCTCGACA...TAGGCAGTCTTTGTGAGTGAGAATAAATTTAACTTGTGGGGGTACTATCAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR TCA 90 bp AAGACTGCCTATAACATCATGCTAGTCCACACTTGGCACTTCCAAGGAGCTGAATTTCAGTTTCTCCAATaGGTCTCTGGAGAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: KTAYNIMLVHTWHFQGAEFQFLQ*VSGESL
Trigger: AAGACTTTCTCCAGAGACTCATTGGAGAAACTGAAA...TTCAGCTCCTTGGAAGTGCCAAGTGTGGACTAGCATGATGTTATAGGCAGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp TTAGACTGTGGACTTGTTCCATTTGCTGGTAAACTTGTGGTATCTCCCTCGATTATCTTCCAAGCTTTCTaGCTTCAGCATCCTGATGTG +
Preference number: 4 (lower is better)
Translates to: LDCGLVPFAGKLVVSPSIIFQAF*LQHPDV
Trigger: CACATCAGGATGCTGAAGGCAGAAAGCTTGGAAGAT...AATCGAGGGAGATACCACAAGTTTACCAGCAAATGGAACAAGTCCACAGTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp TTAGACTGTGGACTTGTTCCATTTGCTGGTAAACTTGTGGTATCTCCCTCGATTTCCTCACACAGCCACTaGAGTTTAGTCTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LDCGLVPFAGKLVVSPSISSHSH*SLVLLS
Trigger: TGAAAGCAAGACTAAACTGCAGTGGCTGTGTGAGGA...AATCGAGGGAGATACCACAAGTTTACCAGCAAATGGAACAAGTCCACAGTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp CCGGCAGAAAGGGGCCTGTCATCCTTTAAATATGTAAGCTTTTCCATACTTAGGGCATTTACACGGTCCTaGAGAGTTTCAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PAERGLSSFKYVSFSILRAFTRS*RVSTSS
Trigger: TGAAGAAGTTGAAACTCTGCAGGACCGTGTAAATGC...CCTAAGTATGGAAAAGCTTACATATTTAAAGGATGACAGGCCCCTTTCTGCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp CAGTTGATAGTACCCCCACAAGTTAAATTTATTCTCACTCACAAAGACTGCCTATTTATTAGCGAGATCTaGTCGGATGGCACTCAGGTC +
Preference number: 4 (lower is better)
Translates to: QLIVPPQVKFILTHKDCLFISEI*SDGTQV
Trigger: GACCTGAGTGCCATCCGAGCAGATCTCGCTAATAAA...TAGGCAGTCTTTGTGAGTGAGAATAAATTTAACTTGTGGGGGTACTATCAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp CAGTTGATAGTACCCCCACAAGTTAAATTTATTCTCACTCACAAAGACTGCCTAAAGGCTGCACAAAGCTaGCTTTTCAGTTCATCCCTC +
Preference number: 4 (lower is better)
Translates to: QLIVPPQVKFILTHKDCLKAAQS*LFSSSL
Trigger: GAGGGATGAACTGAAAAGCCAGCTTTGTGCAGCCTT...TAGGCAGTCTTTGTGAGTGAGAATAAATTTAACTTGTGGGGGTACTATCAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp TTAGACTGTGGACTTGTTCCATTTGCTGGTAAACTTGTGGTATCTCCCTCGATTGTCAGTTTCTCACACTaGGATTTCAACTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LDCGLVPFAGKLVVSPSIVSFSH*DFNFSS
Trigger: GCTAGAGAAGTTGAAATCCCAGTGTGAGAAACTGAC...AATCGAGGGAGATACCACAAGTTTACCAGCAAATGGAACAAGTCCACAGTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp CTTATAAAGGAATTGCTTTATTGTTCCTGCCTCGGTGCAGGTCTTTCCACCATGTTCTCATTTTCAGTGTaGGTTAATTCCTCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: LIKELLYCSCLGAGLSTMFSFSV*VNSSVS
Trigger: ACTGACGGAGGAATTAACCCACACTGAAAATGAGAA...CATGGTGGAAAGACCTGCACCGAGGCAGGAACAATAAAGCAATTCCTTTATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR TCA 90 bp CGGCTGTTACTTGTGAAATACTCAAGTGAAGTCGCAAATCACTTTTTGTATTTTTCCAGCTCCCTCTGGTaGACGTCTCGTTCTAACTTT +
Preference number: 4 (lower is better)
Translates to: RLLLVKYSSEVANHFLYFSSSLW*TSRSNF
Trigger: AAAGTTAGAACGAGACGTTCACCAGAGGGAGCTGGA...AAAATACAAAAAGTGATTTGCGACTTCACTTGAGTATTTCACAAGTAACAGCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp ATTATGAATTCACTGTGTACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTCGTTCCAACTTCTTATaGTTCAGCTTCCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: IMNSLCTDVPESKLLETFRSNFL*FSFHCR
Trigger: CCGGCAGTGGAAGCTGAAGCATAAGAAGTTGGAACG...AAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGTACACAGTGAATTCATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp CGGCTGTTACTTGTGAAATACTCAAGTGAAGTCGCAAATCACTTTTTGTATTTTTCCAGAAGCTGTTCCTaGCTCTCAATGTGCTCGAAC +
Preference number: 4 (lower is better)
Translates to: RLLLVKYSSEVANHFLYFSRSCS*LSMCSN
Trigger: GTTCGAGCACATTGAGAGGCAGGAACAGCTTCTGGA...AAAATACAAAAAGTGATTTGCGACTTCACTTGAGTATTTCACAAGTAACAGCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp AGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAAGGCATCAATTATAAAAGCGTTTCTCTATTaGTTTCAGATTGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: RESLLLLVASHLGKASIIKAFLY*FQIDSA
Trigger: TGCTGAGTCAATCTGAAAGCAATAGAGAAACGCTTT...TATAATTGATGCCTTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CCA 90 bp TGGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCATTCATTGGTCTCTCTTTTATAAACTaGTTGTTCTTCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: WPSRTQFQDDDHYSAFIGLSFIN*LFFSVS
Trigger: GCTGACAGAGAAGAACAACCAGTTTATAAAAGAGAG...ACCAATGAATGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp ATTATGAATTCACTGTGTACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTTTCTTCTCCTTACAGTaGAGCTCCTCTTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: IMNSLCTDVPESKLLETFFFSLQ*SSSSCR
Trigger: CCTGCAGGAAGAGGAGCTCCACTGTAAGGAGAAGAA...AAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGTACACAGTGAATTCATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp AAGACTGCCTATAACATCATGCTAGTCCACACTTGGCACTTCCAAGGAGCTGAATCCTCCTTAAGACTCTaGTATTTTAGCTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: KTAYNIMLVHTWHFQGAESSLRL*YFSFSF
Trigger: AAAACTGAAGCTAAAATACCAGAGTCTTAAGGAGGA...TTCAGCTCCTTGGAAGTGCCAAGTGTGGACTAGCATGATGTTATAGGCAGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR TCA 90 bp ATTATGAATTCACTGTGTACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTTACTGGCAAGGAGTGTaGAAACTGTGGACTAGACAG +
Preference number: 4 (lower is better)
Translates to: IMNSLCTDVPESKLLETFYWQGV*KLWTRQ
Trigger: CTGTCTAGTCCACAGTTTTCACACTCCTTGCCAGTA...AAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGTACACAGTGAATTCATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CCA 90 bp CAGTTGATAGTACCCCCACAAGTTAAATTTATTCTCACTCACAAAGACTGCCTAGTCAGTTTCTCACACTaGGATTTCAACTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: QLIVPPQVKFILTHKDCLVSFSH*DFNFSS
Trigger: GCTAGAGAAGTTGAAATCCCAGTGTGAGAAACTGAC...TAGGCAGTCTTTGTGAGTGAGAATAAATTTAACTTGTGGGGGTACTATCAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp CAGTTGATAGTACCCCCACAAGTTAAATTTATTCTCACTCACAAAGACTGCCTACTATTACACCAAGAATaGATTCCTGTTCCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QLIVPPQVKFILTHKDCLLLHQE*IPVPSP
Trigger: TGGAGACGGAACAGGAATCCATTCTTGGTGTAATAG...TAGGCAGTCTTTGTGAGTGAGAATAAATTTAACTTGTGGGGGTACTATCAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR GCA 90 bp CAGTTGATAGTACCCCCACAAGTTAAATTTATTCTCACTCACAAAGACTGCCTATTCTCCTTCTTAAAGTaGTTCATCAGCTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: QLIVPPQVKFILTHKDCLFSFLK*FISSWI
Trigger: TATCCAGGAGCTGATGAAGCACTTTAAGAAGGAGAA...TAGGCAGTCTTTGTGAGTGAGAATAAATTTAACTTGTGGGGGTACTATCAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CCA 90 bp TTAGACTGTGGACTTGTTCCATTTGCTGGTAAACTTGTGGTATCTCCCTCGATTTCCTCCTTAAGACTCTaGTATTTTAGCTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LDCGLVPFAGKLVVSPSISSLRL*YFSFSF
Trigger: AAAACTGAAGCTAAAATACCAGAGTCTTAAGGAGGA...AATCGAGGGAGATACCACAAGTTTACCAGCAAATGGAACAAGTCCACAGTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
CDS-3UTR TCA 90 bp ATTATGAATTCACTGTGTACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTGCCTTTATCTGGCTTTaGCTCTTACTCTGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: IMNSLCTDVPESKLLETFAFIWL*LLLCLF
Trigger: GAAAAGACAGAGTAAGAGTCAAAGCCAGATAAAGGC...AAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGTACACAGTGAATTCATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 90 bp GGAGCTCAGACTCCTTGTGCTCCGTCAGCTCCCGGAGCTCCTGTCTaGAGGCCGCCAGCTGCTGCCGCATGCTCCTCTCTCTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: GAQTPCAPSAPGAPV*RPPAAAACSSLCSL
Trigger: GAGAGAGCAGAGAGAGGAGCATGCGGCAGCAGCTGGCGGCCTGCAGACAGGAGCTCCGGGAGCTGACGGAGCACAAGGAGTCTGAGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 90 bp TCAGCTCCCGGAGCTCCTGTCTGCAGGCCGCCAGCTGCTGCCGCATaGTCCTCTCTCTGCTCTCTCTCTCTTTCAGTTCCTCACACAGCC +
Preference number: 5 (lower is better)
Translates to: SAPGAPVCRPPAAAA*SSLCSLSLSVPHTA
Trigger: GGCTGTGTGAGGAACTGAAAGAGAGAGAGAGCAGAGAGAGGAGCATGCGGCAGCAGCTGGCGGCCTGCAGACAGGAGCTCCGGGAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 90 bp TTGTGCTCCGTCAGCTCCCGGAGCTCCTGTCTGCAGGCCGCCAGCTaGTGCCGCATGCTCCTCTCTCTGCTCTCTCTCTCTTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: LCSVSSRSSCLQAAS*CRMLLSLLSLSFSS
Trigger: GGAACTGAAAGAGAGAGAGAGCAGAGAGAGGAGCATGCGGCAGCAGCTGGCGGCCTGCAGACAGGAGCTCCGGGAGCTGACGGAGCACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS TCA 90 bp GTGTTCCGCCTGCTTGGTCGCTTCCTCTGCGTGTTGACTCAGCTCTaGGAGCTGGAGGTCGGTCCGCTTACGATTGGCCTCGCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: VFRLLGRFLCVLTQL*ELEVGPLTIGLAGL
Trigger: GAGACCTGCGAGGCCAATCGTAAGCGGACCGACCTCCAGCTCTCAGAGCTGAGTCAACACGCAGAGGAAGCGACCAAGCAGGCGGAACAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS GCA 90 bp GCTCCAAATCCTCCTTTAACTGCCCAACAGCGCCCGCCTGTCCAGTaGTGTATTCGCGATAGCGCCCAAGCATCTGATCCACATGTCGCA +
Preference number: 5 (lower is better)
Translates to: APNPPLTAQQRPPVQ*CIRDSAQASDPHVA
Trigger: TGCGACATGTGGATCAGATGCTTGGGCGCTATCGCGAATACAGCACTGGACAGGCGGGCGCTGTTGGGCAGTTAAAGGAGGATTTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CCA 90 bp TCCCGGGTTAGGTTCTCGATCTGTGCGGCCAGCGTTGCTTTCTCCTaGTCCTTCCGTTCCATGCACCGCTTCACTTCCTCTAACTCCGAA +
Preference number: 5 (lower is better)
Translates to: SRVRFSICAASVAFS*SFRSMHRFTSSNSE
Trigger: TTCGGAGTTAGAGGAAGTGAAGCGGTGCATGGAACGGAAGGACCAGGAGAAAGCAACGCTGGCCGCACAGATCGAGAACCTAACCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS GCA 90 bp TTCTCCTGGTGGAACTCCTCCAGAAGCTGTTCCTGCCTCTCAATGTaGTCGAACAGACACAGGAGCTCAGACTCCTTGTGCTCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: FSWWNSSRSCSCLSM*SNRHRSSDSLCSVS
Trigger: GCTGACGGAGCACAAGGAGTCTGAGCTCCTGTGTCTGTTCGAGCACATTGAGAGGCAGGAACAGCTTCTGGAGGAGTTCCACCAGGAGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CCA 90 bp CCATTGACCGTTCCAACTTCTTATGCTTCAGCTTCCACTGCCGGATaGACTCCTGGGCCTTGGCTTTCAGGTCCTCCCTCCTCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: PLTVPTSYASASTAG*TPGPWLSGPPSSSQ
Trigger: CTGAGAAGAGGAGGGAGGACCTGAAAGCCAAGGCCCAGGAGTCCATCCGGCAGTGGAAGCTGAAGCATAAGAAGTTGGAACGGTCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CCA 90 bp CGTGTTGACTCAGCTCTGAGAGCTGGAGGTCGGTCCGCTTACGATTaGCCTCGCAGGTCTCAAAGTGATTCTGGATCTCCGTCAGTTGGT +
Preference number: 5 (lower is better)
Translates to: RVDSALRAGGRSAYD*PRRSQSDSGSPSVG
Trigger: ACCAACTGACGGAGATCCAGAATCACTTTGAGACCTGCGAGGCCAATCGTAAGCGGACCGACCTCCAGCTCTCAGAGCTGAGTCAACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS GCA 90 bp TGTTTCTCCATTGACCGTTCCAACTTCTTATGCTTCAGCTTCCACTaGCGGATGGACTCCTGGGCCTTGGCTTTCAGGTCCTCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: CFSIDRSNFLCFSFH*RMDSWALAFRSSLL
Trigger: GAGGAGGGAGGACCTGAAAGCCAAGGCCCAGGAGTCCATCCGGCAGTGGAAGCTGAAGCATAAGAAGTTGGAACGGTCAATGGAGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 90 bp AGCAGACCTCTCTTCTCCTGGTGGAACTCCTCCAGAAGCTGTTCCTaGCTCTCAATGTGCTCGAACAGACACAGGAGCTCAGACTCCTTG +
Preference number: 5 (lower is better)
Translates to: SRPLFSWWNSSRSCS*LSMCSNRHRSSDSL
Trigger: CAAGGAGTCTGAGCTCCTGTGTCTGTTCGAGCACATTGAGAGGCAGGAACAGCTTCTGGAGGAGTTCCACCAGGAGAAGAGAGGTCTGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 90 bp CTTTCCACCAGCTCTCTTTCTAAGCGCATCTCTCGTTCTATTTCCTaGAGCCGCCGCTCCACTCGATCTGAAACCACGTCTGGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LSTSSLSKRISRSIS*SRRSTRSETTSGFW
Trigger: CCAGAAGCCAGACGTGGTTTCAGATCGAGTGGAGCGGCGGCTGCAGGAAATAGAACGAGAGATGCGCTTAGAAAGAGAGCTGGTGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS TCA 90 bp GTTCCATGCACCGCTTCACTTCCTCTAACTCCGAAGCCATGGAGTTaGAGTTCAGCTGCACTCGCAGATCTGCCATCTGCTTCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: VPCTASLPLTPKPWS*SSAALADLPSASPD
Trigger: GTCTGGAGAAGCAGATGGCAGATCTGCGAGTGCAGCTGAACTTCAACTCCATGGCTTCGGAGTTAGAGGAAGTGAAGCGGTGCATGGAAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CAA 90 bp ATTCCTACAGAGTGGATGCCACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCATGGCACTCAGGTCCTaGATGGACTCTTGCATCTCA +
Preference number: 5 (lower is better)
Translates to: IPTEWMPLSQERGVGMEVMALRS*MDSCIS
Trigger: TGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCAT...GACCTCCATCCCAACACCCCTCTCTTGGCTCAGTGGCATCCACTCTGTAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp AAGACTGCCTATAACATCATGCTAGTCCACACTTGGCACTTCCAAGGAGCTGAAAGGAGCTCAGACTCCTaGTGCTCCGTCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: KTAYNIMLVHTWHFQGAERSSDS*CSVSSR
Trigger: CCGGGAGCTGACGGAGCACAAGGAGTCTGAGCTCCT...TTCAGCTCCTTGGAAGTGCCAAGTGTGGACTAGCATGATGTTATAGGCAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp ACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCAGAGCAAGACCATCCAGAGTCAACATCTGCAGCTGTaGCTTTTCCCGGTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: TEPREGCWDGGQSKTIQSQHLQL*LFPVLQ
Trigger: TTGGAGAACCGGGAAAAGCAACAGCTGCAGATGTTG...ACTCTGGATGGTCTTGCTCTGACCTCCATCCCAACACCCCTCTCTTGGCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS TCA 90 bp CAAGAATGGATTCCTGTTCCGTCTCCAAACAGAGCAGCTGATCCTTaGGATGCAGCCTGGACTCTTCCATCCGCCTTAGGTGCTCTTCCT +
Preference number: 5 (lower is better)
Translates to: QEWIPVPSPNRAADP*DAAWTLPSALGALP
Trigger: AGGAAGAGCACCTAAGGCGGATGGAAGAGTCCAGGCTGCATCTCAAGGATCAGCTGCTCTGTTTGGAGACGGAACAGGAATCCATTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000140674.2
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp CCGGCAGAAAGGGGCCTGTCATCCTTTAAATATGTAAGCTTTTCCATACTTAGGAGGAGCTCAGACTCCTaGTGCTCCGTCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: PAERGLSSFKYVSFSILRRSSDS*CSVSSR
Trigger: CCGGGAGCTGACGGAGCACAAGGAGTCTGAGCTCCT...CCTAAGTATGGAAAAGCTTACATATTTAAAGGATGACAGGCCCCTTTCTGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp AAAAGCACATTGATGTTGAAAAGGCTGGGATGTGGAGGGCAGTCAGGTAGGACCTCCGAAGCCATGGAGTaGAAGTTCAGCTGCACTCGC +
Preference number: 5 (lower is better)
Translates to: KSTLMLKRLGCGGQSGRTSEAME*KFSCTR
Trigger: GCGAGTGCAGCTGAACTTCAACTCCATGGCTTCGGA...GGTCCTACCTGACTGCCCTCCACATCCCAGCCTTTTCAACATCAATGTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CAA 90 bp TGCCTGAATCTAAACTGCTGGAAACATTTGCCTGGAGGGAATCCCTTCTCCTCCCTGGATCTCCGTCAGTaGGTCCAACATCTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: CLNLNCWKHLPGGNPFSSLDLRQ*VQHLQL
Trigger: CAGCTGCAGATGTTGGACCAACTGACGGAGATCCAG...GGAGGAGAAGGGATTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS TCA 90 bp TTCACACTCTCCAACGAGGAGCTAAGGTCTTCCAGCTCCCTCTGGTaGACGTCTCGTTCTAACTTTAACTGTGTGATAGCCGTGGCGGTT +
Preference number: 5 (lower is better)
Translates to: FTLSNEELRSSSSLW*TSRSNFNCVIAVAV
Trigger: AACCGCCACGGCTATCACACAGTTAAAGTTAGAACGAGACGTTCACCAGAGGGAGCTGGAAGACCTTAGCTCCTCGTTGGAGAGTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS TCA 90 bp TGCGGTGACATCTACTGTAGAATGACTTCCAACTCCCCTTTGAAATaGCCTGGTTGCCCATCGACTCAATCCGTCACGATAGCGGACGTG +
Preference number: 5 (lower is better)
Translates to: CGDIYCRMTSNSPLK*PGCPSTQSVTIADV
Trigger: CACGTCCGCTATCGTGACGGATTGAGTCGATGGGCAACCAGGTCATTTCAAAGGGGAGTTGGAAGTCATTCTACAGTAGATGTCACCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS GCA 90 bp ACAAGGGTTTCAGCTTGTTTCTCCATTGACCGTTCCAACTTCTTATaGTTCAGCTTCCACTGCCGGATGGACTCCTGGGCCTTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: TRVSACFSIDRSNFL*FSFHCRMDSWALAF
Trigger: GAAAGCCAAGGCCCAGGAGTCCATCCGGCAGTGGAAGCTGAAGCATAAGAAGTTGGAACGGTCAATGGAGAAACAAGCTGAAACCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 90 bp GAAGCCATGGAGTTGAAGTTCAGCTGCACTCGCAGATCTGCCATCTaGTTCTCCAGACTCAGTTTCTCCCGCTCTACTCCTCTTCTAAAC +
Preference number: 5 (lower is better)
Translates to: EAMELKFSCTRRSAI*FSRLSFSRSTPLLN
Trigger: GTTTAGAAGAGGAGTAGAGCGGGAGAAACTGAGTCTGGAGAAGCAGATGGCAGATCTGCGAGTGCAGCTGAACTTCAACTCCATGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS GCA 90 bp AGCTTTCTTGGCTTTCTCCTCCTCAGCCAGTTTATTAGCGAGATCTaGTCGGATGGCACTCAGGTCCTTGATGGACTCTTGCATCTCAAG +
Preference number: 5 (lower is better)
Translates to: SFLGFLLLSQFISEI*SDGTQVLDGLLHLK
Trigger: CTTGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCATCCGAGCAGATCTCGCTAATAAACTGGCTGAGGAGGAGAAAGCCAAGAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CCA 90 bp ACCTCCGGTCATCCCCTTGATCATCCTGGTGGCTTAATGGTTGCTTaGAAATGCAAGGTACTTGATGCTGCAAACCCCTTTGGTCACCTT +
Preference number: 5 (lower is better)
Translates to: TSGHPLDHPGGLMVA*KCKVLDAANPFGHL
Trigger: AAGGTGACCAAAGGGGTTTGCAGCATCAAGTACCTTGCATTTCCAAGCAACCATTAAGCCACCAGGATGATCAAGGGGATGACCGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CAA 90 bp GGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGATCCCACTAGCACCTCTGAAGTCTTaGAAATCCTCTAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: GSQVGPKDIRTPTEWIPLAPLKS*KSSSRL
Trigger: GAGCCTGCTAGAGGATTTCAAAGACTTCAGAGGTGC...TAGTGGGATCCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS TCA 90 bp CTGGTGACAGAAACACTTCTCCCTCCTGAGCTTCTCCGTAAGCGCTaGCTCCTCAGTTGGTTTATTGACTGCTCCAAATCCTCCTTTAAC +
Preference number: 5 (lower is better)
Translates to: LVTETLLPPELLRKR*LLSWFIDCSKSSFN
Trigger: GTTAAAGGAGGATTTGGAGCAGTCAATAAACCAACTGAGGAGTCAGCGCTTACGGAGAAGCTCAGGAGGGAGAAGTGTTTCTGTCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS GCA 90 bp CTGACCGAGATGGGCTTTAGCCATATTCTTATCTTCCAAGCTTTCTaGCTTCAGCATCCTGATGTGGCTCTCGGCTTCACTCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: LTEMGFSHILIFQAF*LQHPDVALGFTLLL
Trigger: AAGGAGAAGAGTGAAGCCGAGAGCCACATCAGGATGCTGAAGGCAGAAAGCTTGGAAGATAAGAATATGGCTAAAGCCCATCTCGGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 90 bp GGTCATCCCCTTGATCATCCTGGTGGCTTAATGGTTGCTTGGAAATaGAAGGTACTTGATGCTGCAAACCCCTTTGGTCACCTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: GHPLDHPGGLMVAWK*KVLDAANPFGHLLL
Trigger: AAGCAGAAGGTGACCAAAGGGGTTTGCAGCATCAAGTACCTTGCATTTCCAAGCAACCATTAAGCCACCAGGATGATCAAGGGGATGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CCA 90 bp AACTGTGTGATAGCCGTGGCGGTTTCTTCTTCTTTCGATTTTACCTaGGCTGTCAGCTCAGAAAGGTCCCTGAACACAGCTTTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: NCVIAVAVSSSFDFT*AVSSERSLNTAFLA
Trigger: AGCCAAGAAAGCTGTGTTCAGGGACCTTTCTGAGCTGACAGCCCAGGTAAAATCGAAAGAAGAAGAAACCGCCACGGCTATCACACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CCA 90 bp CTCTCGGCTTCACTCTTCTCCTTCTTAAAGTGCTTCATCAGCTCCTaGATATTCTGCTCGTGCTTCAACTTCACACTCTCCAACGAGGAG +
Preference number: 5 (lower is better)
Translates to: LSASLFSFLKCFISS*IFCSCFNFTLSNEE
Trigger: CTCCTCGTTGGAGAGTGTGAAGTTGAAGCACGAGCAGAATATCCAGGAGCTGATGAAGCACTTTAAGAAGGAGAAGAGTGAAGCCGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CCA 90 bp TTGAAATCCTCTAGCAGGCTCAGTTTCTCAGGCACAGACTCCAGATaGTCCAAGGCCACTCGGGTACTCATTTGTAATGCATTTACACGG +
Preference number: 5 (lower is better)
Translates to: LKSSSRLSFSGTDSR*SKATRVLICNAFTR
Trigger: CCGTGTAAATGCATTACAAATGAGTACCCGAGTGGCCTTGGACCATCTGGAGTCTGTGCCTGAGAAACTGAGCCTGCTAGAGGATTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp GGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGATCCCACTGAAACCCTAAAGCTCTaGATTCTGGGTTTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: GQSGRTKGYKDSYRVDPTETLKL*ILGLVS
Trigger: TGACACCAAACCCAGAATCAAGAGCTTTAGGGTTTC...AGTGGGATCCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp GGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGATCCCACTATCTGCTTTAGCTTCTaGTTTCTTCAGTGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: GQSGRTKGYKDSYRVDPTICFSF*FLQCLL
Trigger: CAGGAGGCACTGAAGAAACAAGAAGCTAAAGCAGAT...AGTGGGATCCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CAA 90 bp GGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGATCCCACTTTCTGCTTTGATAAGTaGTGTACGCAGCTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: GQSGRTKGYKDSYRVDPTFCFDK*CTQLFH
Trigger: GTGGAAGAGCTGCGTACACAACTTATCAAAGCAGAA...AGTGGGATCCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS GCA 90 bp TTCTCCTTCTTAAAGTGCTTCATCAGCTCCTGGATATTCTGCTCGTaGTTCAACTTCACACTCTCCAACGAGGAGCTAAGGTCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: FSFLKCFISSWIFCS*FNFTLSNEELRSSS
Trigger: GCTGGAAGACCTTAGCTCCTCGTTGGAGAGTGTGAAGTTGAAGCACGAGCAGAATATCCAGGAGCTGATGAAGCACTTTAAGAAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 90 bp AGCATCCTGATGTGGCTCTCGGCTTCACTCTTCTCCTTCTTAAAGTaGTTCATCAGCTCCTGGATATTCTGCTCGTGCTTCAACTTCACA +
Preference number: 5 (lower is better)
Translates to: SILMWLSASLFSFLK*FISSWIFCSCFNFT
Trigger: TGTGAAGTTGAAGCACGAGCAGAATATCCAGGAGCTGATGAAGCACTTTAAGAAGGAGAAGAGTGAAGCCGAGAGCCACATCAGGATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 90 bp GTTGTGTACGCAGCTCTTCCACCTGATGCAAAAGCGTTTCTCTATTaGTTTCAGATTGACTCAGCAGCCTGCGTGAGATCTCCAATTCCT +
Preference number: 5 (lower is better)
Translates to: VVYAALPPDAKAFLY*FQIDSAACVRSPIP
Trigger: AGGAATTGGAGATCTCACGCAGGCTGCTGAGTCAATCTGAAAGCAATAGAGAAACGCTTTTGCATCAGGTGGAAGAGCTGCGTACACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CAA 90 bp CCGGCAGAAAGGGGCCTGTCATCCTTTAAATATGTAAGCTTTTCCATACTTAGGCTGAACACAGCTTTCTaGGCTTTCTCCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PAERGLSSFKYVSFSILRLNTAF*AFSSSA
Trigger: GGCTGAGGAGGAGAAAGCCAAGAAAGCTGTGTTCAG...CCTAAGTATGGAAAAGCTTACATATTTAAAGGATGACAGGCCCCTTTCTGCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp ATTCCTACAGAGTGGATGCCACTGAGCCAAGAGAGGGGTGTTGGGATGGAGGTCATGTATTTCTCCTTCTaGTCTAGTTCCTCCTTAAGA +
Preference number: 5 (lower is better)
Translates to: IPTEWMPLSQERGVGMEVMYFSF*SSSSLR
Trigger: TCTTAAGGAGGAACTAGACAAGAAGGAGAAATACAT...GACCTCCATCCCAACACCCCTCTCTTGGCTCAGTGGCATCCACTCTGTAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp CTGTGTACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTGCCTGGAGGGAATGGGTCATAATGGAGTaGAGGACCAGAGGTCAGTAC +
Preference number: 5 (lower is better)
Translates to: LCTDVPESKLLETFAWREWVIME*RTRGQY
Trigger: GTACTGACCTCTGGTCCTCAACTCCATTATGACCCA...TTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGTACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp TGGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCATTCATTGGTCTGAAAAGCTCCCTGTaGAGGTCATCTCCAAGCCGA +
Preference number: 5 (lower is better)
Translates to: WPSRTQFQDDDHYSAFIGLKSSL*RSSPSR
Trigger: TCGGCTTGGAGATGACCTCAACAGGGAGCTTTTCAG...ACCAATGAATGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS GCA 90 bp CGCTTGCTCAAGACATCATTGAGTTCCTTCCTAAGATTCTCGATCTaGTGTAAGGCTGCACAAAGCTGGCTTTTCAGTTCATCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: RLLKTSLSSFLRFSI*CKAAQSWLFSSSLS
Trigger: AGAGAGGGATGAACTGAAAAGCCAGCTTTGTGCAGCCTTACAGCAGATCGAGAATCTTAGGAAGGAACTCAATGATGTCTTGAGCAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 90 bp TCACTCTTCTCCTTCTTAAAGTGCTTCATCAGCTCCTGGATATTCTaGTCGTGCTTCAACTTCACACTCTCCAACGAGGAGCTAAGGTCT +
Preference number: 5 (lower is better)
Translates to: SLFSFLKCFISSWIF*SCFNFTLSNEELRS
Trigger: AGACCTTAGCTCCTCGTTGGAGAGTGTGAAGTTGAAGCACGAGCAGAATATCCAGGAGCTGATGAAGCACTTTAAGAAGGAGAAGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 90 bp GGAAATGCAAGGTACTTGATGCTGCAAACCCCTTTGGTCACCTTCTaGTTTGATAAGTTGTGTACGCAGCTCTTCCACCTGATGCAAAAG +
Preference number: 5 (lower is better)
Translates to: GNARYLMLQTPLVTF*FDKLCTQLFHLMQK
Trigger: CTTTTGCATCAGGTGGAAGAGCTGCGTACACAACTTATCAAAGCAGAAGGTGACCAAAGGGGTTTGCAGCATCAAGTACCTTGCATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CCA 90 bp TGCTCTTCCTCGGTACTTATGTATTTCTCCTTCAGCATCCTGATGTaGCTCTCGGCTTCACTCTTCTCCTTCTTAAAGTGCTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: CSSSVLMYFSFSILM*LSASLFSFLKCFIS
Trigger: GCTGATGAAGCACTTTAAGAAGGAGAAGAGTGAAGCCGAGAGCCACATCAGGATGCTGAAGGAGAAATACATAAGTACCGAGGAAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140674.2
CDS-3UTR CAA 90 bp GGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGATCCCACTAGGCCTTTATCTGGCTTaGACTCTTACTCTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: GSQVGPKDIRTPTEWIPLGLYLA*TLTLSF
Trigger: AAAAGACAGAGTAAGAGTCAAAGCCAGATAAAGGCC...TAGTGGGATCCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp CTGTGTACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTGCCTGGAGGGAAGTCCTTGATGGACTCTaGCATCTCAAGGAGTTTGAC +
Preference number: 5 (lower is better)
Translates to: LCTDVPESKLLETFAWREVLDGL*HLKEFD
Trigger: GTCAAACTCCTTGAGATGCAAGAGTCCATCAAGGAC...TTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGTACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp CTTGTTCCATTTGCTGGTAAACTTGTGGTATCTCCCTCGATTGATGCTGGATCTGCACCTCTGAAGTCTTaGAAATCCTCTAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LVPFAGKLVVSPSIDAGSAPLKS*KSSSRL
Trigger: GAGCCTGCTAGAGGATTTCAAAGACTTCAGAGGTGC...AGATCCAGCATCAATCGAGGGAGATACCACAAGTTTACCAGCAAATGGAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp AACATTTGCCTGGAGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAAGTATTGGTTATGGTGTaGACCTTTGCGGTGACATCT +
Preference number: 5 (lower is better)
Translates to: NICLEGIPSPPCSQSSWKVLVMV*TFAVTS
Trigger: AGATGTCACCGCAAAGGTCAACACCATAACCAATAC...TTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCTCCAGGCAAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CAA 90 bp GATGTGGAGGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGCTTCTCGGTTTCACTTaGTCGCAGCTTTCTTTTTAT +
Preference number: 5 (lower is better)
Translates to: DVEGSQVGPKDIRTPTEWLLGFT*SQLSFY
Trigger: ATAAAAAGAAAGCTGCGACAAAGTGAAACCGAGAAG...CCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCCTCCACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CAA 90 bp AAGACTGCCTATAACATCATGCTAGTCCACACTTGGCACTTCCAAGGAGCTGAATGGGACTCAATGTCATaGAGCTTCTTCTCCTTACAG +
Preference number: 5 (lower is better)
Translates to: KTAYNIMLVHTWHFQGAEWDSMS*SFFSLQ
Trigger: CTGTAAGGAGAAGAAGCTCAATGACATTGAGTCCCA...TTCAGCTCCTTGGAAGTGCCAAGTGTGGACTAGCATGATGTTATAGGCAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp GATGTGGAGGGCAGTCAGGTAGGACCAAAGGATATAAGGACTCCTACAGAGTGGATGTATTTCTCCTTCTaGTCTAGTTCCTCCTTAAGA +
Preference number: 5 (lower is better)
Translates to: DVEGSQVGPKDIRTPTEWMYFSF*SSSSLR
Trigger: TCTTAAGGAGGAACTAGACAAGAAGGAGAAATACAT...CCACTCTGTAGGAGTCCTTATATCCTTTGGTCCTACCTGACTGCCCTCCACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp AGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAAGGCATCAATTATATGGTCACCTTCTGCTTaGATAAGTTGTGTACGCAGC +
Preference number: 5 (lower is better)
Translates to: RESLLLLVASHLGKASIIWSPSA*ISCVRS
Trigger: GCTGCGTACACAACTTATCAAAGCAGAAGGTGACCA...TATAATTGATGCCTTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CAA 90 bp ATTATGAATTCACTGTGTACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTTCTGTGCGGCCAGCGTaGCTTTCTCCTGGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: IMNSLCTDVPESKLLETFSVRPA*LSPGPS
Trigger: GGAAGGACCAGGAGAAAGCAACGCTGGCCGCACAGA...AAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGTACACAGTGAATTCATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CAA 90 bp ACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTGCCTGGAGGGAATCCCTTTCATCCCTAAAGCTCTaGATTCTGGGTTTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: TDVPESKLLETFAWRESLSSLKL*ILGLVS
Trigger: TGACACCAAACCCAGAATCAAGAGCTTTAGGGATGA...AAGGGATTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CCA 90 bp GCTGCACAAAGCTGGCTTTTCAGTTCATCCCTCTCTTTTATAAACTaGTTGTTCTTCTCTGTCAGCTGGACAAGGGTTTCAGCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: AAQSWLFSSSLSFIN*LFFSVSWTRVSACF
Trigger: GAAACAAGCTGAAACCCTTGTCCAGCTGACAGAGAAGAACAACCAGTTTATAAAAGAGAGGGATGAACTGAAAAGCCAGCTTTGTGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp CCACCATGGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCATTCTTGCTCAAGACATCATaGAGTTCCTTCCTAAGATTC +
Preference number: 5 (lower is better)
Translates to: PPWPSRTQFQDDDHYSAFLLKTS*SSFLRF
Trigger: GAATCTTAGGAAGGAACTCAATGATGTCTTGAGCAA...GAATGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCATGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp CAGTTGATAGTACCCCCACAAGTTAAATTTATTCTCACTCACAAAGACTGCCTACTGAACACAGCTTTCTaGGCTTTCTCCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: QLIVPPQVKFILTHKDCLLNTAF*AFSSSA
Trigger: GGCTGAGGAGGAGAAAGCCAAGAAAGCTGTGTTCAG...TAGGCAGTCTTTGTGAGTGAGAATAAATTTAACTTGTGGGGGTACTATCAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS TCA 90 bp AATTCCTCCGTCAGTTTCTCACACTGGGATTTCAACTTCTCTAGCTaGCCGAGATGGGCTTTAGCCATATTCTTATCTTCCAAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: NSSVSFSHWDFNFSS*PRWALAIFLSSKLS
Trigger: AGAAAGCTTGGAAGATAAGAATATGGCTAAAGCCCATCTCGGTCAGCTAGAGAAGTTGAAATCCCAGTGTGAGAAACTGACGGAGGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp AGGGAATCCCTTCTCCTCCTTGTAGCCAGTCATCTTGGAAAGGCATCAATTATACAGCTTGTTTCTCCATaGACCGTTCCAACTTCTTAT +
Preference number: 5 (lower is better)
Translates to: RESLLLLVASHLGKASIIQLVSP*TVPTSY
Trigger: ATAAGAAGTTGGAACGGTCAATGGAGAAACAAGCTG...TATAATTGATGCCTTTCCAAGATGACTGGCTACAAGGAGGAGAAGGGATTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp ACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTGCCTGGAGGGAATCCCTTTCTTTTATAAACTGGTaGTTCTTCTCTGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: TDVPESKLLETFAWRESLSFINW*FFSVSW
Trigger: CCAGCTGACAGAGAAGAACAACCAGTTTATAAAAGA...AAGGGATTCCCTCCAGGCAAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp AGTAAGGATCATCGGCTGTTACTTGTGAAATACTCAAGTGAAGTCGCAAATCACGTCCTTGATGGACTCTaGCATCTCAAGGAGTTTGAC +
Preference number: 5 (lower is better)
Translates to: SKDHRLLLVKYSSEVANHVLDGL*HLKEFD
Trigger: GTCAAACTCCTTGAGATGCAAGAGTCCATCAAGGAC...GTGATTTGCGACTTCACTTGAGTATTTCACAAGTAACAGCCGATGATCCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp CAGTTGATAGTACCCCCACAAGTTAAATTTATTCTCACTCACAAAGACTGCCTATGGGTCATAATGGAGTaGAGGACCAGAGGTCAGTAC +
Preference number: 5 (lower is better)
Translates to: QLIVPPQVKFILTHKDCLWVIME*RTRGQY
Trigger: GTACTGACCTCTGGTCCTCAACTCCATTATGACCCA...TAGGCAGTCTTTGTGAGTGAGAATAAATTTAACTTGTGGGGGTACTATCAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp CCACCATGGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCATTCCACTTTTTGTATTTTTaGATCTCGTGTTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PPWPSRTQFQDDDHYSAFHFLYF*ISCSSF
Trigger: GAAGGAGGAACACGAGATCAAAAAATACAAAAAGTG...GAATGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCATGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS-3UTR CAA 90 bp TGGCCCAGTAGGACTCAGTTTCAGGATGATGACCATTATTCAGCATTCATTGGTTCTTTTATAAACTGGTaGTTCTTCTCTGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: WPSRTQFQDDDHYSAFIGSFINW*FFSVSW
Trigger: CCAGCTGACAGAGAAGAACAACCAGTTTATAAAAGA...ACCAATGAATGCTGAATAATGGTCATCATCCTGAAACTGAGTCCTACTGGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp CTTATAAAGGAATTGCTTTATTGTTCCTGCCTCGGTGCAGGTCTTTCCACCATGTTGCTCAAGACATCATaGAGTTCCTTCCTAAGATTC +
Preference number: 5 (lower is better)
Translates to: LIKELLYCSCLGAGLSTMLLKTS*SSFLRF
Trigger: GAATCTTAGGAAGGAACTCAATGATGTCTTGAGCAA...CATGGTGGAAAGACCTGCACCGAGGCAGGAACAATAAAGCAATTCCTTTATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp AGTAAGGATCATCGGCTGTTACTTGTGAAATACTCAAGTGAAGTCGCAAATCACTGGGACTCAATGTCATaGAGCTTCTTCTCCTTACAG +
Preference number: 5 (lower is better)
Translates to: SKDHRLLLVKYSSEVANHWDSMS*SFFSLQ
Trigger: CTGTAAGGAGAAGAAGCTCAATGACATTGAGTCCCA...GTGATTTGCGACTTCACTTGAGTATTTCACAAGTAACAGCCGATGATCCTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp TTAGACTGTGGACTTGTTCCATTTGCTGGTAAACTTGTGGTATCTCCCTCGATTGGCCTTTATCTGGCTTaGACTCTTACTCTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: LDCGLVPFAGKLVVSPSIGLYLA*TLTLSF
Trigger: AAAAGACAGAGTAAGAGTCAAAGCCAGATAAAGGCC...AATCGAGGGAGATACCACAAGTTTACCAGCAAATGGAACAAGTCCACAGTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
CDS-3UTR CAA 90 bp ATTATGAATTCACTGTGTACAGATGTGCCTGAATCTAAACTGCTGGAAACATTTGTGTCCTGTAAAGTATaGGTTATGGTGTTGACCTTT +
Preference number: 5 (lower is better)
Translates to: IMNSLCTDVPESKLLETFVSCKV*VMVLTF
Trigger: AAAGGTCAACACCATAACCAATACTTTACAGGACAC...AAATGTTTCCAGCAGTTTAGATTCAGGCACATCTGTACACAGTGAATTCATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS GCA 72 bp ACTCCTTGTGCTCCGTCAGCTCCCGGAGCTCCTGTCTaGAGGCCGCCAGCTGCTGCCGCATGCTCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: TPCAPSAPGAPV*RPPAAAACSSL
Trigger: GAGAGAGGAGCATGCGGCAGCAGCTGGCGGCCTGCAGACAGGAGCTCCGGGAGCTGACGGAGCACAAGGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 72 bp GTCAGCTCCCGGAGCTCCTGTCTGCAGGCCGCCAGCTaGTGCCGCATGCTCCTCTCTCTGCTCTCTCTCTCT +
Preference number: 6 (lower is better)
Translates to: VSSRSSCLQAAS*CRMLLSLLSLS
Trigger: AGAGAGAGAGAGCAGAGAGAGGAGCATGCGGCAGCAGCTGGCGGCCTGCAGACAGGAGCTCCGGGAGCTGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 72 bp ATGTGCTCGAACAGACACAGGAGCTCAGACTCCTTGTaGTCCGTCAGCTCCCGGAGCTCCTGTCTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: MCSNRHRSSDSL*SVSSRSSCLQA
Trigger: GGCCTGCAGACAGGAGCTCCGGGAGCTGACGGAGCACAAGGAGTCTGAGCTCCTGTGTCTGTTCGAGCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 72 bp AGTCCCGGGTTAGGTTCTCGATCTGTGCGGCCAGCGTaGCTTTCTCCTGGTCCTTCCGTTCCATGCACCGCT +
Preference number: 6 (lower is better)
Translates to: SPGLGSRSVRPA*LSPGPSVPCTA
Trigger: AGCGGTGCATGGAACGGAAGGACCAGGAGAAAGCAACGCTGGCCGCACAGATCGAGAACCTAACCCGGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CAA 90 bp GGTTCTCCAAGTCCCGGGTTAGGTTCTCGATCTGTGCGGCCAGCGTaGCTTTCTCCTGGTCCTTCCGTTCCATGCACCGCTTCACTTCCT +
Preference number: 6 (lower is better)
Translates to: GSPSPGLGSRSVRPA*LSPGPSVPCTASLP
Trigger: AGGAAGTGAAGCGGTGCATGGAACGGAAGGACCAGGAGAAAGCAACGCTGGCCGCACAGATCGAGAACCTAACCCGGGACTTGGAGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS TCA 72 bp CTCCCTCCTCTTCTCAGCCTCCTCTCGCAGGGTCTCTaGCCTCTGGAACTCACTAAGGTAGTGTTCCGCCTG +
Preference number: 6 (lower is better)
Translates to: LPPLLSLLSQGL*PLELTKVVFRL
Trigger: CAGGCGGAACACTACCTTAGTGAGTTCCAGAGGTCAGAGACCCTGCGAGAGGAGGCTGAGAAGAGGAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 72 bp CCTCCTTTAACTGCCCAACAGCGCCCGCCTGTCCAGTaGTGTATTCGCGATAGCGCCCAAGCATCTGATCCA +
Preference number: 6 (lower is better)
Translates to: PPLTAQQRPPVQ*CIRDSAQASDP
Trigger: TGGATCAGATGCTTGGGCGCTATCGCGAATACAGCACTGGACAGGCGGGCGCTGTTGGGCAGTTAAAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS GCA 72 bp CGGCCAGCGTTGCTTTCTCCTGGTCCTTCCGTTCCATaGACCGCTTCACTTCCTCTAACTCCGAAGCCATGG +
Preference number: 6 (lower is better)
Translates to: RPALLSPGPSVP*TASLPLTPKPW
Trigger: CCATGGCTTCGGAGTTAGAGGAAGTGAAGCGGTGCATGGAACGGAAGGACCAGGAGAAAGCAACGCTGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CAA 72 bp TCAATGTGCTCGAACAGACACAGGAGCTCAGACTCCTaGTGCTCCGTCAGCTCCCGGAGCTCCTGTCTGCAG +
Preference number: 6 (lower is better)
Translates to: SMCSNRHRSSDS*CSVSSRSSCLQ
Trigger: CTGCAGACAGGAGCTCCGGGAGCTGACGGAGCACAAGGAGTCTGAGCTCCTGTGTCTGTTCGAGCACATTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CCA 72 bp GTTCCAACTTCTTATGCTTCAGCTTCCACTGCCGGATaGACTCCTGGGCCTTGGCTTTCAGGTCCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: VPTSYASASTAG*TPGPWLSGPPS
Trigger: GGAGGGAGGACCTGAAAGCCAAGGCCCAGGAGTCCATCCGGCAGTGGAAGCTGAAGCATAAGAAGTTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CCA 72 bp AGGTTCTCGATCTGTGCGGCCAGCGTTGCTTTCTCCTaGTCCTTCCGTTCCATGCACCGCTTCACTTCCTCT +
Preference number: 6 (lower is better)
Translates to: RFSICAASVAFS*SFRSMHRFTSS
Trigger: AGAGGAAGTGAAGCGGTGCATGGAACGGAAGGACCAGGAGAAAGCAACGCTGGCCGCACAGATCGAGAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CCA 72 bp TCAGCTCTGAGAGCTGGAGGTCGGTCCGCTTACGATTaGCCTCGCAGGTCTCAAAGTGATTCTGGATCTCCG +
Preference number: 6 (lower is better)
Translates to: SALRAGGRSAYD*PRRSQSDSGSP
Trigger: CGGAGATCCAGAATCACTTTGAGACCTGCGAGGCCAATCGTAAGCGGACCGACCTCCAGCTCTCAGAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CCA 72 bp TTCTTATGCTTCAGCTTCCACTGCCGGATGGACTCCTaGGCCTTGGCTTTCAGGTCCTCCCTCCTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: FLCFSFHCRMDS*ALAFRSSLLFS
Trigger: TGAGAAGAGGAGGGAGGACCTGAAAGCCAAGGCCCAGGAGTCCATCCGGCAGTGGAAGCTGAAGCATAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 90 bp TCCCTCCTGAGCTTCTCCGTAAGCGCTGACTCCTCAGTTGGTTTATaGACTGCTCCAAATCCTCCTTTAACTGCCCAACAGCGCCCGCCT +
Preference number: 6 (lower is better)
Translates to: SLLSFSVSADSSVGL*TAPNPPLTAQQRPP
Trigger: AGGCGGGCGCTGTTGGGCAGTTAAAGGAGGATTTGGAGCAGTCAATAAACCAACTGAGGAGTCAGCGCTTACGGAGAAGCTCAGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CAA 90 bp CTTTTGGTTTCAGCGTCAGACCGGCTTCTTCTGAAAAGCTCCCTGTaGAGGTCATCTCCAAGCCGAACCTGTTCACTGCTGAGGTCGCGG +
Preference number: 6 (lower is better)
Translates to: LLVSASDRLLLKSSL*RSSPSRTCSLLRSR
Trigger: CCGCGACCTCAGCAGTGAACAGGTTCGGCTTGGAGATGACCTCAACAGGGAGCTTTTCAGAAGAAGCCGGTCTGACGCTGAAACCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS GCA 72 bp ATTGACCGTTCCAACTTCTTATGCTTCAGCTTCCACTaGCGGATGGACTCCTGGGCCTTGGCTTTCAGGTCC +
Preference number: 6 (lower is better)
Translates to: IDRSNFLCFSFH*RMDSWALAFRS
Trigger: GGACCTGAAAGCCAAGGCCCAGGAGTCCATCCGGCAGTGGAAGCTGAAGCATAAGAAGTTGGAACGGTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 72 bp TGGAACTCCTCCAGAAGCTGTTCCTGCCTCTCAATGTaGTCGAACAGACACAGGAGCTCAGACTCCTTGTGC +
Preference number: 6 (lower is better)
Translates to: WNSSRSCSCLSM*SNRHRSSDSLC
Trigger: GCACAAGGAGTCTGAGCTCCTGTGTCTGTTCGAGCACATTGAGAGGCAGGAACAGCTTCTGGAGGAGTTCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 72 bp GAGATTCTCTGTCACAGCGCCACCATCAAGGTCACTTaGACTCAGGCTGGTGACAGAAACACTTCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: EILCHSATIKVT*TQAGDRNTSPS
Trigger: GGAGGGAGAAGTGTTTCTGTCACCAGCCTGAGTGCAAGTGACCTTGATGGTGGCGCTGTGACAGAGAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CAA 72 bp CACCGCTTCACTTCCTCTAACTCCGAAGCCATGGAGTaGAAGTTCAGCTGCACTCGCAGATCTGCCATCTGC +
Preference number: 6 (lower is better)
Translates to: HRFTSSNSEAME*KFSCTRRSAIC
Trigger: GCAGATGGCAGATCTGCGAGTGCAGCTGAACTTCAACTCCATGGCTTCGGAGTTAGAGGAAGTGAAGCGGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CAA 90 bp CGTTCCATGCACCGCTTCACTTCCTCTAACTCCGAAGCCATGGAGTaGAAGTTCAGCTGCACTCGCAGATCTGCCATCTGCTTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: RSMHRFTSSNSEAME*KFSCTRRSAICFSR
Trigger: TCTGGAGAAGCAGATGGCAGATCTGCGAGTGCAGCTGAACTTCAACTCCATGGCTTCGGAGTTAGAGGAAGTGAAGCGGTGCATGGAACG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS TCA 72 bp ATTCCTGTTCCGTCTCCAAACAGAGCAGCTGATCCTTaGGATGCAGCCTGGACTCTTCCATCCGCCTTAGGT +
Preference number: 6 (lower is better)
Translates to: IPVPSPNRAADP*DAAWTLPSALG
Trigger: ACCTAAGGCGGATGGAAGAGTCCAGGCTGCATCTCAAGGATCAGCTGCTCTGTTTGGAGACGGAACAGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000140674.2
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS TCA 72 bp ACCGCTTCACTTCCTCTAACTCCGAAGCCATGGAGTTaGAGTTCAGCTGCACTCGCAGATCTGCCATCTGCT +
Preference number: 6 (lower is better)
Translates to: TASLPLTPKPWS*SSAALADLPSA
Trigger: AGCAGATGGCAGATCTGCGAGTGCAGCTGAACTTCAACTCCATGGCTTCGGAGTTAGAGGAAGTGAAGCGGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS GCA 72 bp TCAGCTTGTTTCTCCATTGACCGTTCCAACTTCTTATaGTTCAGCTTCCACTGCCGGATGGACTCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: SACFSIDRSNFL*FSFHCRMDSWA
Trigger: GGCCCAGGAGTCCATCCGGCAGTGGAAGCTGAAGCATAAGAAGTTGGAACGGTCAATGGAGAAACAAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 72 bp GGCTTTCTCCTCCTCAGCCAGTTTATTAGCGAGATCTaGTCGGATGGCACTCAGGTCCTTGATGGACTCTTG +
Preference number: 6 (lower is better)
Translates to: GFLLLSQFISEI*SDGTQVLDGLL
Trigger: CAAGAGTCCATCAAGGACCTGAGTGCCATCCGAGCAGATCTCGCTAATAAACTGGCTGAGGAGGAGAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 72 bp GAGTTGAAGTTCAGCTGCACTCGCAGATCTGCCATCTaGTTCTCCAGACTCAGTTTCTCCCGCTCTACTCCT +
Preference number: 6 (lower is better)
Translates to: ELKFSCTRRSAI*FSRLSFSRSTP
Trigger: AGGAGTAGAGCGGGAGAAACTGAGTCTGGAGAAGCAGATGGCAGATCTGCGAGTGCAGCTGAACTTCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS GCA 72 bp TCCTCTAACTCCGAAGCCATGGAGTTGAAGTTCAGCTaGACTCGCAGATCTGCCATCTGCTTCTCCAGACTC +
Preference number: 6 (lower is better)
Translates to: SSNSEAMELKFS*TRRSAICFSRL
Trigger: GAGTCTGGAGAAGCAGATGGCAGATCTGCGAGTGCAGCTGAACTTCAACTCCATGGCTTCGGAGTTAGAGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CAA 90 bp ACGATTGGCCTCGCAGGTCTCAAAGTGATTCTGGATCTCCGTCAGTaGGTCCAACATCTGCAGCTGTTGCTTTTCCCGGTTCTCCAAGTC +
Preference number: 6 (lower is better)
Translates to: TIGLAGLKVILDLRQ*VQHLQLLLFPVLQV
Trigger: GACTTGGAGAACCGGGAAAAGCAACAGCTGCAGATGTTGGACCAACTGACGGAGATCCAGAATCACTTTGAGACCTGCGAGGCCAATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CAA 90 bp TTCTTGACCTCCAGTTCGAGTTCAGCTTGGTGGGACTCAATGTCATaGAGCTTCTTCTCCTTACAGTGGAGCTCCTCTTCCTGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: FLTSSSSSAWWDSMS*SFFSLQWSSSSCRA
Trigger: TGCCCTGCAGGAAGAGGAGCTCCACTGTAAGGAGAAGAAGCTCAATGACATTGAGTCCCACCAAGCTGAACTCGAACTGGAGGTCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS TCA 72 bp TCGTTCTATTTCCTGCAGCCGCCGCTCCACTCGATCTaGAACCACGTCTGGCTTCTGGACTTCATTAAGCTT +
Preference number: 6 (lower is better)
Translates to: SFYFLQPPLHSI*NHVWLLDFIKL
Trigger: AAGCTTAATGAAGTCCAGAAGCCAGACGTGGTTTCAGATCGAGTGGAGCGGCGGCTGCAGGAAATAGAACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CAA 72 bp ATCTGCTCGGATGGCACTCAGGTCCTTGATGGACTCTaGCATCTCAAGGAGTTTGACTTTGTCCTGGGACTG +
Preference number: 6 (lower is better)
Translates to: ICSDGTQVLDGL*HLKEFDFVLGL
Trigger: CAGTCCCAGGACAAAGTCAAACTCCTTGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCATCCGAGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 90 bp AGCTTCTTCTCCTTACAGTGGAGCTCCTCTTCCTGCAGGGCACGCTaGCTCAAGACATCATTGAGTTCCTTCCTAAGATTCTCGATCTGC +
Preference number: 6 (lower is better)
Translates to: SFFSLQWSSSSCRAR*LKTSLSSFLRFSIC
Trigger: GCAGATCGAGAATCTTAGGAAGGAACTCAATGATGTCTTGAGCAAGCGTGCCCTGCAGGAAGAGGAGCTCCACTGTAAGGAGAAGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 90 bp TCAGCCAGTTTATTAGCGAGATCTGCTCGGATGGCACTCAGGTCCTaGATGGACTCTTGCATCTCAAGGAGTTTGACTTTGTCCTGGGAC +
Preference number: 6 (lower is better)
Translates to: SASLLARSARMALRS*MDSCISRSLTLSWD
Trigger: GTCCCAGGACAAAGTCAAACTCCTTGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCATCCGAGCAGATCTCGCTAATAAACTGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS TCA 72 bp CCAGTTCGAGTTCAGCTTGGTGGGACTCAATGTCATTaGGCTTCTTCTCCTTACAGTGGAGCTCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: PVRVQLGGTQCH*ASSPYSGAPLP
Trigger: AGGAAGAGGAGCTCCACTGTAAGGAGAAGAAGCTCAATGACATTGAGTCCCACCAAGCTGAACTCGAACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS TCA 72 bp TCCAACGAGGAGCTAAGGTCTTCCAGCTCCCTCTGGTaGACGTCTCGTTCTAACTTTAACTGTGTGATAGCC +
Preference number: 6 (lower is better)
Translates to: SNEELRSSSSLW*TSRSNFNCVIA
Trigger: GGCTATCACACAGTTAAAGTTAGAACGAGACGTTCACCAGAGGGAGCTGGAAGACCTTAGCTCCTCGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CCA 72 bp ATAGCCGTGGCGGTTTCTTCTTCTTTCGATTTTACCTaGGCTGTCAGCTCAGAAAGGTCCCTGAACACAGCT +
Preference number: 6 (lower is better)
Translates to: IAVAVSSSFDFT*AVSSERSLNTA
Trigger: AGCTGTGTTCAGGGACCTTTCTGAGCTGACAGCCCAGGTAAAATCGAAAGAAGAAGAAACCGCCACGGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 72 bp TCCTTACAGTGGAGCTCCTCTTCCTGCAGGGCACGCTaGCTCAAGACATCATTGAGTTCCTTCCTAAGATTC +
Preference number: 6 (lower is better)
Translates to: SLQWSSSSCRAR*LKTSLSSFLRF
Trigger: GAATCTTAGGAAGGAACTCAATGATGTCTTGAGCAAGCGTGCCCTGCAGGAAGAGGAGCTCCACTGTAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 72 bp TCCAGTTCGAGTTCAGCTTGGTGGGACTCAATGTCATaGAGCTTCTTCTCCTTACAGTGGAGCTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: SSSSSAWWDSMS*SFFSLQWSSSS
Trigger: GGAAGAGGAGCTCCACTGTAAGGAGAAGAAGCTCAATGACATTGAGTCCCACCAAGCTGAACTCGAACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 90 bp ATGGATGGTGTCGAGGGAATTCTTGACCTCCAGTTCGAGTTCAGCTaGGTGGGACTCAATGTCATTGAGCTTCTTCTCCTTACAGTGGAG +
Preference number: 6 (lower is better)
Translates to: MDGVEGILDLQFEFS*VGLNVIELLLLTVE
Trigger: CTCCACTGTAAGGAGAAGAAGCTCAATGACATTGAGTCCCACCAAGCTGAACTCGAACTGGAGGTCAAGAATTCCCTCGACACCATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 90 bp ATTAGCGAGATCTGCTCGGATGGCACTCAGGTCCTTGATGGACTCTaGCATCTCAAGGAGTTTGACTTTGTCCTGGGACTGACTCTTCTT +
Preference number: 6 (lower is better)
Translates to: ISEICSDGTQVLDGL*HLKEFDFVLGLTLL
Trigger: AAGAAGAGTCAGTCCCAGGACAAAGTCAAACTCCTTGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCATCCGAGCAGATCTCGCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS TCA 72 bp CATTCTCCAATCTATGGATGGTGTCGAGGGAATTCTTaGCCTCCAGTTCGAGTTCAGCTTGGTGGGACTCAA +
Preference number: 6 (lower is better)
Translates to: HSPIYGWCRGNS*PPVRVQLGGTQ
Trigger: TTGAGTCCCACCAAGCTGAACTCGAACTGGAGGTCAAGAATTCCCTCGACACCATCCATAGATTGGAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 72 bp AGGTACTTGATGCTGCAAACCCCTTTGGTCACCTTCTaGTTTGATAAGTTGTGTACGCAGCTCTTCCACCTG +
Preference number: 6 (lower is better)
Translates to: RYLMLQTPLVTF*FDKLCTQLFHL
Trigger: CAGGTGGAAGAGCTGCGTACACAACTTATCAAAGCAGAAGGTGACCAAAGGGGTTTGCAGCATCAAGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CAA 72 bp TCCTCTTCCTGCAGGGCACGCTTGCTCAAGACATCATaGAGTTCCTTCCTAAGATTCTCGATCTGCTGTAAG +
Preference number: 6 (lower is better)
Translates to: SSSCRARLLKTS*SSFLRFSICCK
Trigger: CTTACAGCAGATCGAGAATCTTAGGAAGGAACTCAATGATGTCTTGAGCAAGCGTGCCCTGCAGGAAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 72 bp GTCGAGGGAATTCTTGACCTCCAGTTCGAGTTCAGCTaGGTGGGACTCAATGTCATTGAGCTTCTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: VEGILDLQFEFS*VGLNVIELLLL
Trigger: AAGGAGAAGAAGCTCAATGACATTGAGTCCCACCAAGCTGAACTCGAACTGGAGGTCAAGAATTCCCTCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 72 bp TCATTCTCCAATCTATGGATGGTGTCGAGGGAATTCTaGACCTCCAGTTCGAGTTCAGCTTGGTGGGACTCA +
Preference number: 6 (lower is better)
Translates to: SFSNLWMVSREF*TSSSSSAWWDS
Trigger: TGAGTCCCACCAAGCTGAACTCGAACTGGAGGTCAAGAATTCCCTCGACACCATCCATAGATTGGAGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 90 bp CTGCCATCAGTTTTCTCAGATAAACTGGAGGCACCTCTGAAGTCTTaGAAATCCTCTAGCAGGCTCAGTTTCTCAGGCACAGACTCCAGA +
Preference number: 6 (lower is better)
Translates to: LPSVFSDKLEAPLKS*KSSSRLSFSGTDSR
Trigger: TCTGGAGTCTGTGCCTGAGAAACTGAGCCTGCTAGAGGATTTCAAAGACTTCAGAGGTGCCTCCAGTTTATCTGAGAAAACTGATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS TCA 72 bp TGTCAGCTGGACAAGGGTTTCAGCTTGTTTCTCCATTaGCCGTTCCAACTTCTTATGCTTCAGCTTCCACTG +
Preference number: 6 (lower is better)
Translates to: CQLDKGFSLFLH*PFQLLMLQLPL
Trigger: CAGTGGAAGCTGAAGCATAAGAAGTTGGAACGGTCAATGGAGAAACAAGCTGAAACCCTTGTCCAGCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS TCA 72 bp TGGTGGCTTAATGGTTGCTTGGAAATGCAAGGTACTTaGTGCTGCAAACCCCTTTGGTCACCTTCTGCTTTG +
Preference number: 6 (lower is better)
Translates to: WWLNGCLEMQGT*CCKPLWSPSAL
Trigger: CAAAGCAGAAGGTGACCAAAGGGGTTTGCAGCATCAAGTACCTTGCATTTCCAAGCAACCATTAAGCCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS GCA 72 bp TTAAAGTGCTTCATCAGCTCCTGGATATTCTGCTCGTaGTTCAACTTCACACTCTCCAACGAGGAGCTAAGG +
Preference number: 6 (lower is better)
Translates to: LKCFISSWIFCS*FNFTLSNEELR
Trigger: CCTTAGCTCCTCGTTGGAGAGTGTGAAGTTGAAGCACGAGCAGAATATCCAGGAGCTGATGAAGCACTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 72 bp TCCTTCTTAAAGTGCTTCATCAGCTCCTGGATATTCTaGTCGTGCTTCAACTTCACACTCTCCAACGAGGAG +
Preference number: 6 (lower is better)
Translates to: SFLKCFISSWIF*SCFNFTLSNEE
Trigger: CTCCTCGTTGGAGAGTGTGAAGTTGAAGCACGAGCAGAATATCCAGGAGCTGATGAAGCACTTTAAGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 72 bp ATGGGCTTTAGCCATATTCTTATCTTCCAAGCTTTCTaGCTTCAGCATCCTGATGTGGCTCTCGGCTTCACT +
Preference number: 6 (lower is better)
Translates to: MGFSHILIFQAF*LQHPDVALGFT
Trigger: AGTGAAGCCGAGAGCCACATCAGGATGCTGAAGGCAGAAAGCTTGGAAGATAAGAATATGGCTAAAGCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 72 bp CTGCTCTCTCTCTCTTTCAGTTCCTCACACAGCCACTaGAGTTTAGTCTTGCTTTCAGCTAACCATCGATGT +
Preference number: 6 (lower is better)
Translates to: LLSLSFSSSHSH*SLVLLSANHRC
Trigger: ACATCGATGGTTAGCTGAAAGCAAGACTAAACTGCAGTGGCTGTGTGAGGAACTGAAAGAGAGAGAGAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000140674.2
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS GCA 72 bp CTTGATCATCCTGGTGGCTTAATGGTTGCTTGGAAATaGAAGGTACTTGATGCTGCAAACCCCTTTGGTCAC +
Preference number: 6 (lower is better)
Translates to: LDHPGGLMVAWK*KVLDAANPFGH
Trigger: GTGACCAAAGGGGTTTGCAGCATCAAGTACCTTGCATTTCCAAGCAACCATTAAGCCACCAGGATGATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CCA 72 bp AGGGAATTCTTGACCTCCAGTTCGAGTTCAGCTTGGTaGGACTCAATGTCATTGAGCTTCTTCTCCTTACAG +
Preference number: 6 (lower is better)
Translates to: REFLTSSSSSAW*DSMSLSFFSLQ
Trigger: CTGTAAGGAGAAGAAGCTCAATGACATTGAGTCCCACCAAGCTGAACTCGAACTGGAGGTCAAGAATTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CCA 72 bp TCGAGGGAATTCTTGACCTCCAGTTCGAGTTCAGCTTaGTGGGACTCAATGTCATTGAGCTTCTTCTCCTTA +
Preference number: 6 (lower is better)
Translates to: SREFLTSSSSSA*WDSMSLSFFSL
Trigger: TAAGGAGAAGAAGCTCAATGACATTGAGTCCCACCAAGCTGAACTCGAACTGGAGGTCAAGAATTCCCTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CCA 72 bp CATCCCCTTGATCATCCTGGTGGCTTAATGGTTGCTTaGAAATGCAAGGTACTTGATGCTGCAAACCCCTTT +
Preference number: 6 (lower is better)
Translates to: HPLDHPGGLMVA*KCKVLDAANPF
Trigger: AAAGGGGTTTGCAGCATCAAGTACCTTGCATTTCCAAGCAACCATTAAGCCACCAGGATGATCAAGGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CAA 72 bp CTGTCAGCTGGACAAGGGTTTCAGCTTGTTTCTCCATaGACCGTTCCAACTTCTTATGCTTCAGCTTCCACT +
Preference number: 6 (lower is better)
Translates to: LSAGQGFQLVSP*TVPTSYASAST
Trigger: AGTGGAAGCTGAAGCATAAGAAGTTGGAACGGTCAATGGAGAAACAAGCTGAAACCCTTGTCCAGCTGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 72 bp TTATTAGCGAGATCTGCTCGGATGGCACTCAGGTCCTaGATGGACTCTTGCATCTCAAGGAGTTTGACTTTG +
Preference number: 6 (lower is better)
Translates to: LLARSARMALRS*MDSCISRSLTL
Trigger: CAAAGTCAAACTCCTTGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCATCCGAGCAGATCTCGCTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 90 bp CTTTTCAACTCATTCTCCAATCTATGGATGGTGTCGAGGGAATTCTaGACCTCCAGTTCGAGTTCAGCTTGGTGGGACTCAATGTCATTG +
Preference number: 6 (lower is better)
Translates to: LFNSFSNLWMVSREF*TSSSSSAWWDSMSL
Trigger: CAATGACATTGAGTCCCACCAAGCTGAACTCGAACTGGAGGTCAAGAATTCCCTCGACACCATCCATAGATTGGAGAATGAGTTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 90 bp AACCCTAAAGCTCTTGATTCTGGGTTTGGTGTCATCTCGGCGCTGTaGAACAGAATCTCCGTGAAGACTGTATTTAGAATACCTGCCATC +
Preference number: 6 (lower is better)
Translates to: NPKALDSGFGVISAL*NRISVKTVFRIPAI
Trigger: GATGGCAGGTATTCTAAATACAGTCTTCACGGAGATTCTGTTCAACAGCGCCGAGATGACACCAAACCCAGAATCAAGAGCTTTAGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000143415.8
CDS CAA 90 bp ATCCCTAAAGCTCTTGATTCTGGGTTTGGTGTCATCTCGGCGCTGTaGAACAGAATCTCCGTGAAGACTGTATTTAGAATACCTGCCATC +
Preference number: 6 (lower is better)
Translates to: IPKALDSGFGVISAL*NRISVKTVFRIPAI
Trigger: GATGGCAGGTATTCTAAATACAGTCTTCACGGAGATTCTGTTCAACAGCGCCGAGATGACACCAAACCCAGAATCAAGAGCTTTAGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS TCA 72 bp ATCTACTGTAGAATGACTTCCAACTCCCCTTTGAAATaGCCTGGTTGCCCATCGACTCAATCCGTCACGATA +
Preference number: 6 (lower is better)
Translates to: IYCRMTSNSPLK*PGCPSTQSVTI
Trigger: TATCGTGACGGATTGAGTCGATGGGCAACCAGGTCATTTCAAAGGGGAGTTGGAAGTCATTCTACAGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CAA 72 bp GTTTTCTCAGATAAACTGGAGGCACCTCTGAAGTCTTaGAAATCCTCTAGCAGGCTCAGTTTCTCAGGCACA +
Preference number: 6 (lower is better)
Translates to: VFSDKLEAPLKS*KSSSRLSFSGT
Trigger: TGTGCCTGAGAAACTGAGCCTGCTAGAGGATTTCAAAGACTTCAGAGGTGCCTCCAGTTTATCTGAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 90 bp TACTTGATGCTGCAAACCCCTTTGGTCACCTTCTGCTTTGATAAGTaGTGTACGCAGCTCTTCCACCTGATGCAAAAGCGTTTCTCTATT +
Preference number: 6 (lower is better)
Translates to: YLMLQTPLVTFCFDK*CTQLFHLMQKRFSI
Trigger: AATAGAGAAACGCTTTTGCATCAGGTGGAAGAGCTGCGTACACAACTTATCAAAGCAGAAGGTGACCAAAGGGGTTTGCAGCATCAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS TCA 72 bp GTCAGTTTCTCACACTGGGATTTCAACTTCTCTAGCTaGCCGAGATGGGCTTTAGCCATATTCTTATCTTCC +
Preference number: 6 (lower is better)
Translates to: VSFSHWDFNFSS*PRWALAIFLSS
Trigger: GGAAGATAAGAATATGGCTAAAGCCCATCTCGGTCAGCTAGAGAAGTTGAAATCCCAGTGTGAGAAACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 72 bp GCTCTTGATTCTGGGTTTGGTGTCATCTCGGCGCTGTaGAACAGAATCTCCGTGAAGACTGTATTTAGAATA +
Preference number: 6 (lower is better)
Translates to: ALDSGFGVISAL*NRISVKTVFRI
Trigger: TATTCTAAATACAGTCTTCACGGAGATTCTGTTCAACAGCGCCGAGATGACACCAAACCCAGAATCAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 72 bp TCATTAAGCTTCCCAGTCAATTCTTCTAACACCCTTTaGGTTTCAGCGTCAGACCGGCTTCTTCTGAAAAGC +
Preference number: 6 (lower is better)
Translates to: SLSFPVNSSNTL*VSASDRLLLKS
Trigger: GCTTTTCAGAAGAAGCCGGTCTGACGCTGAAACCAAAAGGGTGTTAGAAGAATTGACTGGGAAGCTTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS GCA 72 bp AAGACATCATTGAGTTCCTTCCTAAGATTCTCGATCTaGTGTAAGGCTGCACAAAGCTGGCTTTTCAGTTCA +
Preference number: 6 (lower is better)
Translates to: KTSLSSFLRFSI*CKAAQSWLFSS
Trigger: TGAACTGAAAAGCCAGCTTTGTGCAGCCTTACAGCAGATCGAGAATCTTAGGAAGGAACTCAATGATGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 72 bp TGGCTTTTCAGTTCATCCCTCTCTTTTATAAACTGGTaGTTCTTCTCTGTCAGCTGGACAAGGGTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: WLFSSSLSFINW*FFSVSWTRVSA
Trigger: AGCTGAAACCCTTGTCCAGCTGACAGAGAAGAACAACCAGTTTATAAAAGAGAGGGATGAACTGAAAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 72 bp CAATTCCTGTTCCAGTTGGCTCTTCTCGGTTTCACTTaGTCGCAGCTTTCTTTTTATTACGTCCTCATTCTC +
Preference number: 6 (lower is better)
Translates to: QFLFQLALLGFT*SQLSFYYVLIL
Trigger: GAGAATGAGGACGTAATAAAAAGAAAGCTGCGACAAAGTGAAACCGAGAAGAGCCAACTGGAACAGGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000141429.8
CDS CAA 72 bp TTCCTCCAGGTGAATTTTCTCGGCCTTTATCTGGCTTaGACTCTTACTCTGTCTTTTCAACTCATTCTCCAA +
Preference number: 6 (lower is better)
Translates to: FLQVNFLGLYLA*TLTLSFQLILQ
Trigger: TTGGAGAATGAGTTGAAAAGACAGAGTAAGAGTCAAAGCCAGATAAAGGCCGAGAAAATTCACCTGGAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8
CDS CAA 90 bp TGTAATTTCTTCCTCCAGGTGAATTTTCTCGGCCTTTATCTGGCTTaGACTCTTACTCTGTCTTTTCAACTCATTCTCCAATCTATGGAT +
Preference number: 6 (lower is better)
Translates to: CNFFLQVNFLGLYLA*TLTLSFQLILQSMD
Trigger: ATCCATAGATTGGAGAATGAGTTGAAAAGACAGAGTAAGAGTCAAAGCCAGATAAAGGCCGAGAAAATTCACCTGGAGGAAGAAATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000141429.8
ENSMUST00000143415.8