Pregenerated sensors for CEP126 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040729Ensembl transcript IDs: ENSMUST00000037397.8, ENSMUST00000238782.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTAGTCCAGGCTCGACTGACTTTAAACGTTGGGCTCTCCATTTGTaGCGGCCTCTCCCTTTGGACTGCTCCTTCAGTGGGATCACTTGC | + |
|
Preference number: 1 (lower is better) Translates to: SSPGSTDFKRWALHL*RPLPLDCSFSGITC Trigger: GCAAGTGATCCCACTGAAGGAGCAGTCCAAAGGGAGAGGCCGGCACAAATGGAGAGCCCAACGTTTAAAGTCAGTCGAGCCTGGACTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CCA 90 bp | CTGACTTTAAACGTTGGGCTCTCCATTTGTGCCGGCCTCTCCCTTTaGACTGCTCCTTCAGTGGGATCACTTGCTCTCACAACATTGCTT | + |
|
Preference number: 1 (lower is better) Translates to: LTLNVGLSICAGLSL*TAPSVGSLALTTLL Trigger: AAGCAATGTTGTGAGAGCAAGTGATCCCACTGAAGGAGCAGTCCAAAGGGAGAGGCCGGCACAAATGGAGAGCCCAACGTTTAAAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR TCA 90 bp | GAGTTTGGGCCACTGTGTTGGCTTTGCTTGAAGTTTGTGGCTGGCTaGCAGTGGGTTTTCTGTTCTGCACAAGTCCTTTCTGGACCTTTG | + |
|
Preference number: 1 (lower is better) Translates to: EFGPLCWLCLKFVAG*QWVFCSAQVLSGPL Trigger: CAAAGGTCCAGAAAGGACTTGTGCAGAACAGAAAACCCACTGTCAGCCAGCCACAAACTTCAAGCAAAGCCAACACAGTGGCCCAAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR TCA 90 bp | GCAGGGAGGTTAGAACAGGTGTCTGAGAACGGGAGACTACTTTCTTaGGTCCCCTGGTTCAAATGGTACTCTGTTGGAAGCACAGATGCT | + |
|
Preference number: 1 (lower is better) Translates to: AGRLEQVSENGRLLS*VPWFKWYSVGSTDA Trigger: AGCATCTGTGCTTCCAACAGAGTACCATTTGAACCAGGGGACTCAAGAAAGTAGTCTCCCGTTCTCAGACACCTGTTCTAACCTCCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR GCA 90 bp | GCTTTGCTTGAAGTTTGTGGCTGGCTGACAGTGGGTTTTCTGTTCTaGACAAGTCCTTTCTGGACCTTTGAAGACCCTGTTCTTCTAGTG | + |
|
Preference number: 1 (lower is better) Translates to: ALLEVCGWLTVGFLF*TSPFWTFEDPVLLV Trigger: CACTAGAAGAACAGGGTCTTCAAAGGTCCAGAAAGGACTTGTGCAGAACAGAAAACCCACTGTCAGCCAGCCACAAACTTCAAGCAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CCA 90 bp | CGCTGTAACCACCGTGGAGCCATTCCTGCTCTGTTCCTCACTGGGTaGCAATCATCTACAGCATTTTCTAAGTTAGCACTTTCATCAAAC | + |
|
Preference number: 1 (lower is better) Translates to: RCNHRGAIPALFLTG*QSSTAFSKLALSSN Trigger: GTTTGATGAAAGTGCTAACTTAGAAAATGCTGTAGATGATTGCCACCCAGTGAGGAACAGAGCAGGAATGGCTCCACGGTGGTTACAGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CCA 90 bp | AGGATCTTCTGCTCTTCAGCTGACAGGGCACAGACATTGGTTGGTTaGGACAGATTTGGTTTCTGTAGATGCTTGCTGTTTATGGCAGTC | + |
|
Preference number: 1 (lower is better) Translates to: RIFCSSADRAQTLVG*DRFGFCRCLLFMAV Trigger: GACTGCCATAAACAGCAAGCATCTACAGAAACCAAATCTGTCCCAACCAACCAATGTCTGTGCCCTGTCAGCTGAAGAGCAGAAGATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CCA 90 bp | TGTGGCTGGCTGACAGTGGGTTTTCTGTTCTGCACAAGTCCTTTCTaGACCTTTGAAGACCCTGTTCTTCTAGTGAATTTTACTCCTCTC | + |
|
Preference number: 1 (lower is better) Translates to: CGWLTVGFLFCTSPF*TFEDPVLLVNFTPL Trigger: GAGAGGAGTAAAATTCACTAGAAGAACAGGGTCTTCAAAGGTCCAGAAAGGACTTGTGCAGAACAGAAAACCCACTGTCAGCCAGCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR TCA 90 bp | GCTGACAGTGGGTTTTCTGTTCTGCACAAGTCCTTTCTGGACCTTTaGAGACCCTGTTCTTCTAGTGAATTTTACTCCTCTCTGAGGCTT | + |
|
Preference number: 1 (lower is better) Translates to: ADSGFSVLHKSFLDL*RPCSSSEFYSSLRL Trigger: AAGCCTCAGAGAGGAGTAAAATTCACTAGAAGAACAGGGTCTTCAAAGGTCCAGAAAGGACTTGTGCAGAACAGAAAACCCACTGTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CCA 90 bp | ATCGAAGCAGTTCTGCTTTCCCAAGTTAACTCAGAAGGCCTCTCTTaGACGGAAAATGAAGCTGTTTCCTGGGTTAGAGATTCTGCAGTA | + |
|
Preference number: 1 (lower is better) Translates to: IEAVLLSQVNSEGLS*TENEAVSWVRDSAV Trigger: TACTGCAGAATCTCTAACCCAGGAAACAGCTTCATTTTCCGTCCAAGAGAGGCCTTCTGAGTTAACTTGGGAAAGCAGAACTGCTTCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR GCA 90 bp | GACTTCGATGGGTACAATATACTGCTCCGTCTTTCAGGAAAGCTGTaGCATTTGAATTGGCTTTTGCTAAGGTTTGGCACTCAGAAGAGT | + |
|
Preference number: 1 (lower is better) Translates to: DFDGYNILLRLSGKL*HLNWLLLRFGTQKS Trigger: ACTCTTCTGAGTGCCAAACCTTAGCAAAAGCCAATTCAAATGGCACAGCTTTCCTGAAAGACGGAGCAGTATATTGTACCCATCGAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CCA 90 bp | CTTTGCACTGTGGATCCAACATCAGGAGACAGACTTGCCCTTGGCTaGCTGCTCAGAAGTGGTATTAATTGTAAAGTATTTTTGATGGAA | + |
|
Preference number: 1 (lower is better) Translates to: LCTVDPTSGDRLALG*LLRSGINCKVFLME Trigger: TTCCATCAAAAATACTTTACAATTAATACCACTTCTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGGATCCACAGTGCAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR TCA 90 bp | TTCTTCTCCATGGGAGAATGGATTCTTCTTCAGTATTCCTATGAGTaGAAGACTGGTAGCTTTCTTCACAAACAGGACTTCGATGGGTAC | + |
|
Preference number: 1 (lower is better) Translates to: FFSMGEWILLQYSYE*KTGSFLHKQDFDGY Trigger: GTACCCATCGAAGTCCTGTTTGTGAAGAAAGCTACCAGTCTTTCACTCATAGGAATACTGAAGAAGAATCCATTCTCCCATGGAGAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR GCA 90 bp | CACAGACATTGGTTGGTTGGGACAGATTTGGTTTCTGTAGATGCTTaGTGTTTATGGCAGTCAGAATTTCATCTTCAGGCACTGAAGAAT | + |
|
Preference number: 1 (lower is better) Translates to: HRHWLVGTDLVSVDA*CLWQSEFHLQALKN Trigger: ATTCTTCAGTGCCTGAAGATGAAATTCTGACTGCCATAAACAGCAAGCATCTACAGAAACCAAATCTGTCCCAACCAACCAATGTCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CCA 90 bp | TACAATATACTGCTCCGTCTTTCAGGAAAGCTGTGCCATTTGAATTaGCTTTTGCTAAGGTTTGGCACTCAGAAGAGTAAGGAGTTGGTA | + |
|
Preference number: 1 (lower is better) Translates to: YNILLRLSGKLCHLN*LLLRFGTQKSKELV Trigger: TACCAACTCCTTACTCTTCTGAGTGCCAAACCTTAGCAAAAGCCAATTCAAATGGCACAGCTTTCCTGAAAGACGGAGCAGTATATTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR TCA 90 bp | CCCTTGGCTGGCTGCTCAGAAGTGGTATTAATTGTAAAGTATTTTTaGTGGAAGGGTTTTTGCGAATTGCTTCTTGTACATAGTATAGCC | + |
|
Preference number: 1 (lower is better) Translates to: PLAGCSEVVLIVKYF*WKGFCELLLVHSIA Trigger: GGCTATACTATGTACAAGAAGCAATTCGCAAAAACCCTTCCATCAAAAATACTTTACAATTAATACCACTTCTGAGCAGCCAGCCAAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CCA 90 bp | ATCAGTGGTTCTCTCATTTTGGTGTCCATTGATTCTTCTTCTCCATaGGAGAATGGATTCTTCTTCAGTATTCCTATGAGTGAAAGACTG | + |
|
Preference number: 1 (lower is better) Translates to: ISGSLILVSIDSSSP*ENGFFFSIPMSERL Trigger: CAGTCTTTCACTCATAGGAATACTGAAGAAGAATCCATTCTCCCATGGAGAAGAAGAATCAATGGACACCAAAATGAGAGAACCACTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR TCA 90 bp | GATGTATATTTCTTCACGCTCTCCAGCCTCAAGACTGTCTATACTTaGGAGAGTTTCAGAATTGGTTATCTGATTGACTTCATCACAAAA | + |
|
Preference number: 1 (lower is better) Translates to: DVYFFTLSSLKTVYT*ESFRIGYLIDFITK Trigger: TTTTGTGATGAAGTCAATCAGATAACCAATTCTGAAACTCTCTCAAGTATAGACAGTCTTGAGGCTGGAGAGCGTGAAGAAATATACATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGCACTGTGGATCCAACATCAGGAGACAGACTTGCCCTTGGCTGGCTGCTCAGAGGGGAACAGAGTTCTaGTGGGTTGACGTGGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LHCGSNIRRQTCPWLAAQRGTEF*WVDVEG Trigger: GCCTTCCACGTCAACCCAGCAGAACTCTGTTCCCCT...CTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGGATCCACAGTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 90 bp | TGCAGTAGTCCAGGCTCGACTGACTTTAAACGTTGGGCTCTCCATTaGTGCCGGCCTCTCCCTTTGGACTGCTCCTTCAGTGGGATCACT | + |
|
Preference number: 2 (lower is better) Translates to: CSSPGSTDFKRWALH*CRPLPLDCSFSGIT Trigger: AGTGATCCCACTGAAGGAGCAGTCCAAAGGGAGAGGCCGGCACAAATGGAGAGCCCAACGTTTAAAGTCAGTCGAGCCTGGACTACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGCACTGTGGATCCAACATCAGGAGACAGACTTGCCCTTGGCTGGCTGCTCAGGGGAGACTACTTTCTTaGGTCCCCTGGTTCAAATGG | + |
|
Preference number: 2 (lower is better) Translates to: LHCGSNIRRQTCPWLAAQGRLLS*VPWFKW Trigger: CCATTTGAACCAGGGGACTCAAGAAAGTAGTCTCCC...CTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGGATCCACAGTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAACATCAGGAGACAGACTTGCCCTTGGCTGGCTGCTCAGAAGTGGTATTAATTGCTCTCTCCTCTTCTaGAGGCCGACCAGGCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: PTSGDRLALGWLLRSGINCSLLF*RPTRLV Trigger: AACAAGCCTGGTCGGCCTGCAGAAGAGGAGAGAGCA...ATTAATACCACTTCTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCTTTCCAGCAGCAGAATGTACAGGACACTCAGGAATACTTGTCAGGTTGTGCCGGCCTCTCCCTTTaGACTGCTCCTTCAGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LSFQQQNVQDTQEYLSGCAGLSL*TAPSVG Trigger: TCCCACTGAAGGAGCAGTCCAAAGGGAGAGGCCGGC...ACAACCTGACAAGTATTCCTGAGTGTCCTGTACATTCTGCTGCTGGAAAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 90 bp | TGGCTTTCTTTCCAGCAGCAGAATGTACAGGACACTCAGGAATACTaGTCAGGTTGTAGGTGCCACTGTTGGTGTGACAGCGCTGTAACC | + |
|
Preference number: 2 (lower is better) Translates to: WLSFQQQNVQDTQEY*SGCRCHCWCDSAVT Trigger: GGTTACAGCGCTGTCACACCAACAGTGGCACCTACAACCTGACAAGTATTCCTGAGTGTCCTGTACATTCTGCTGCTGGAAAGAAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 90 bp | ACAGGGGCTTTGCTCTCTCCTCTTCTGCAGGCCGACCAGGCTTGTTaGGCAAAGCTAAAGCCTAAAGATACAGAAGAGTTCAAAGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: TGALLSPLLQADQAC*AKLKPKDTEEFKGT Trigger: TGTGCCTTTGAACTCTTCTGTATCTTTAGGCTTTAGCTTTGCCAAACAAGCCTGGTCGGCCTGCAGAAGAGGAGAGAGCAAAGCCCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGCACTGTGGATCCAACATCAGGAGACAGACTTGCCCTTGGCTGGCTGCTCAGTTCTTCCCACAGTTCTaGTCAAAGCAGGTGGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: LHCGSNIRRQTCPWLAAQFFPQF*SKQVDF Trigger: AAAATCCACCTGCTTTGAGCAGAACTGTGGGAAGAA...CTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGGATCCACAGTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTGCTGCTCTGGCAAGTCACAGTCAGGAGGGTTGTTACACAGTGCTGCTGATGAATGAAGCTGTTTCCTaGGTTAGAGATTCTGCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: CAALASHSQEGCYTVLLMNEAVS*VRDSAV Trigger: TACTGCAGAATCTCTAACCCAGGAAACAGCTTCATT...CATCAGCAGCACTGTGTAACAACCCTCCTGACTGTGACTTGCCAGAGCAGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCCAGCAGCAGAATGTACAGGACACTCAGGAATACTTGTCAGGTTGTAGGTACTGACTTTAAACGTTaGGCTCTCCATTTGTGCCGG | + |
|
Preference number: 2 (lower is better) Translates to: LSSSRMYRTLRNTCQVVGTDFKR*ALHLCR Trigger: CCGGCACAAATGGAGAGCCCAACGTTTAAAGTCAGT...ACCTACAACCTGACAAGTATTCCTGAGTGTCCTGTACATTCTGCTGCTGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGAGACAGACTTTATGCTGTGCTGCTCTaGCAAGTCACAGTCAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: TAHQYFLCTVDPTSGDRLYAVLL*QVTVRR Trigger: CCTCCTGACTGTGACTTGCCAGAGCAGCACAGCATA...AAGTCTGTCTCCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGATGGAGTGACTTCAGGATCTTCTGCTCTTCAGCTGACAGGGCACAGACATAGTCTTGACACCTCTTaGAGCTTGTATTTGTTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GDGVTSGSSALQLTGHRHSLDTS*SLYLFS Trigger: ACTGAACAAATACAAGCTCCAAGAGGTGTCAAGACT...ATGTCTGTGCCCTGTCAGCTGAAGAGCAGAAGATCCTGAAGTCACTCCATCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 90 bp | CCCTGTTCTTCTAGTGAATTTTACTCCTCTCTGAGGCTTAGTCTTTaGAGTCTTAGAGTCACTAGCATGTACAGGGGCTTTGCTCTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: PCSSSEFYSSLRLSL*SLRVTSMYRGFALS Trigger: GGAGAGAGCAAAGCCCCTGTACATGCTAGTGACTCTAAGACTCAAAAGACTAAGCCTCAGAGAGGAGTAAAATTCACTAGAAGAACAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 90 bp | ATACTGCTCCGTCTTTCAGGAAAGCTGTGCCATTTGAATTGGCTTTaGCTAAGGTTTGGCACTCAGAAGAGTAAGGAGTTGGTAGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: ILLRLSGKLCHLNWL*LRFGTQKSKELVEL Trigger: CAGCTCTACCAACTCCTTACTCTTCTGAGTGCCAAACCTTAGCAAAAGCCAATTCAAATGGCACAGCTTTCCTGAAAGACGGAGCAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 90 bp | GCTCTTCAGCTGACAGGGCACAGACATTGGTTGGTTGGGACAGATTaGGTTTCTGTAGATGCTTGCTGTTTATGGCAGTCAGAATTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: ALQLTGHRHWLVGTD*VSVDACCLWQSEFH Trigger: ATGAAATTCTGACTGCCATAAACAGCAAGCATCTACAGAAACCAAATCTGTCCCAACCAACCAATGTCTGTGCCCTGTCAGCTGAAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGAGACAGACTTCCACTGTGTTGGCTTTaGTTGAAGTTTGTGGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: TAHQYFLCTVDPTSGDRLPLCWL*LKFVAG Trigger: GCCAGCCACAAACTTCAAGCAAAGCCAACACAGTGG...AAGTCTGTCTCCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATTTTACTCCTCTCTGAGGCTTAGTCTTTTGAGTCTTAGAGTCACTAGCATGGGAACAGAGTTCTGCTaGGTTGACGTGGAAGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: EFYSSLRLSLLSLRVTSMGTEFC*VDVEGF Trigger: GAAGCCTTCCACGTCAACCCAGCAGAACTCTGTTCC...CATGCTAGTGACTCTAAGACTCAAAAGACTAAGCCTCAGAGAGGAGTAAAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CCA 90 bp | GACTTCGATGGGTACAATATACTGCTCCGTCTTTCAGGAAAGCTGTGCCATTTGCTGTTCCTCACTGGGTaGCAATCATCTACAGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: DFDGYNILLRLSGKLCHLLFLTG*QSSTAF Trigger: AAATGCTGTAGATGATTGCCACCCAGTGAGGAACAG...CAAATGGCACAGCTTTCCTGAAAGACGGAGCAGTATATTGTACCCATCGAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CCA 90 bp | GACTTCGATGGGTACAATATACTGCTCCGTCTTTCAGGAAAGCTGTGCCATTTGATCAGTAGCATTTTCTaGGACAGAATCAGCCTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: DFDGYNILLRLSGKLCHLISSIF*DRISLG Trigger: GCCAAGGCTGATTCTGTCCCAGAAAATGCTACTGAT...CAAATGGCACAGCTTTCCTGAAAGACGGAGCAGTATATTGTACCCATCGAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 90 bp | ACAGTTTATCTTCATCAAAGCAGTCTAAATGAGCTGCTTGTAGATTaGCTGACTGAAGGGGAACAGAGTTCTGCTGGGTTGACGTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: TVYLHQSSLNELLVD*LTEGEQSSAGLTWK Trigger: CTTCCACGTCAACCCAGCAGAACTCTGTTCCCCTTCAGTCAGCAAATCTACAAGCAGCTCATTTAGACTGCTTTGATGAAGATAAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 90 bp | GATGGGTACAATATACTGCTCCGTCTTTCAGGAAAGCTGTGCCATTaGAATTGGCTTTTGCTAAGGTTTGGCACTCAGAAGAGTAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: DGYNILLRLSGKLCH*NWLLLRFGTQKSKE Trigger: CTCCTTACTCTTCTGAGTGCCAAACCTTAGCAAAAGCCAATTCAAATGGCACAGCTTTCCTGAAAGACGGAGCAGTATATTGTACCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR TCA 90 bp | GACTTCGATGGGTACAATATACTGCTCCGTCTTTCAGGAAAGCTGTGCCATTTGGCACACAAAGACCATTaGGTCACTAGTAGTTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: DFDGYNILLRLSGKLCHLAHKDH*VTSSSC Trigger: ACAAGAACTACTAGTGACTCAATGGTCTTTGTGTGC...CAAATGGCACAGCTTTCCTGAAAGACGGAGCAGTATATTGTACCCATCGAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCCAGCAGCAGAATGTACAGGACACTCAGGAATACTTGTCAGGTTGTAGGTTTCAGTGGGATCACTTaGTCTCACAACATTGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LSSSRMYRTLRNTCQVVGFSGIT*SHNIAF Trigger: GAAAGCAATGTTGTGAGAGCAAGTGATCCCACTGAA...ACCTACAACCTGACAAGTATTCCTGAGTGTCCTGTACATTCTGCTGCTGGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTAAAGCCTAAAGATACAGAAGAGTTCAAAGGCACACTGTCTATTTCATATCCGTGGAGCCATTCCTaGTCTGTTCCTCACTGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KLKPKDTEEFKGTLSISYPWSHS*SVPHWV Trigger: CACCCAGTGAGGAACAGAGCAGGAATGGCTCCACGG...ATATGAAATAGACAGTGTGCCTTTGAACTCTTCTGTATCTTTAGGCTTTAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAACATCAGGAGACAGACTTGCCCTTGGCTGGCTGCTCAGAAGTGGTATTAATGATGCTTGCTGTTTATaGCAGTCAGAATTTCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: PTSGDRLALGWLLRSGINDACCL*QSEFHL Trigger: AAGATGAAATTCTGACTGCCATAAACAGCAAGCATC...ATTAATACCACTTCTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 90 bp | GCACAGACATTGGTTGGTTGGGACAGATTTGGTTTCTGTAGATGCTaGCTGTTTATGGCAGTCAGAATTTCATCTTCAGGCACTGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: AQTLVGWDRFGFCRC*LFMAVRISSSGTEE Trigger: TTCTTCAGTGCCTGAAGATGAAATTCTGACTGCCATAAACAGCAAGCATCTACAGAAACCAAATCTGTCCCAACCAACCAATGTCTGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGTACTTGGTGGGACATTTTGTCCAAAATGAGTTATTTGCTCGGTGTACTTCAAGAGTTCTGCTGGGTTaGCGTGGAAGGCTTCATACT | + |
|
Preference number: 2 (lower is better) Translates to: LYLVGHFVQNELFARCTSRVLLG*RGRLHT Trigger: AGTATGAAGCCTTCCACGTCAACCCAGCAGAACTCT...TGAAGTACACCGAGCAAATAACTCATTTTGGACAAAATGTCCCACCAAGTACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR GCA 90 bp | GAATTTTACTCCTCTCTGAGGCTTAGTCTTTTGAGTCTTAGAGTCACTAGCATGGGACACTGTGTTTTATaGTGTGCTGCTCTGGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: EFYSSLRLSLLSLRVTSMGHCVL*CAALAS Trigger: ACTTGCCAGAGCAGCACAGCATAAAACACAGTGTCC...CATGCTAGTGACTCTAAGACTCAAAAGACTAAGCCTCAGAGAGGAGTAAAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTGACTATCACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGTCAGAAGGCCTCTCTTaGACGGAAAATGAAGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SDYHSSSVFSLHCGSNIRSEGLS*TENEAV Trigger: AACAGCTTCATTTTCCGTCCAAGAGAGGCCTTCTGA...CCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGTGATAGTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTACTTGGTGGGACATTTTGTCCAAAATGAGTTATTTGCTCGGTGTACTTCAGGACAGAATCAGCCTTaGCTTTCTTTCCAGCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LYLVGHFVQNELFARCTSGQNQP*LSFQQQ Trigger: CTGCTGCTGGAAAGAAAGCCAAGGCTGATTCTGTCC...TGAAGTACACCGAGCAAATAACTCATTTTGGACAAAATGTCCCACCAAGTACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 90 bp | TCATATCTTCCTAAATCAGTAGCATTTTCTGGGACAGAATCAGCCTaGGCTTTCTTTCCAGCAGCAGAATGTACAGGACACTCAGGAATA | + |
|
Preference number: 2 (lower is better) Translates to: SYLPKSVAFSGTESA*AFFPAAECTGHSGI Trigger: TATTCCTGAGTGTCCTGTACATTCTGCTGCTGGAAAGAAAGCCAAGGCTGATTCTGTCCCAGAAAATGCTACTGATTTAGGAAGATATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 90 bp | ATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGAGACAGACTaGCCCTTGGCTGGCTGCTCAGAAGTGGTATTAATTGTAAAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: ISIFFALWIQHQETD*PLAGCSEVVLIVKY Trigger: ATACTTTACAATTAATACCACTTCTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGGATCCACAGTGCAAAGAAAATACTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR GCA 90 bp | GAATTTTACTCCTCTCTGAGGCTTAGTCTTTTGAGTCTTAGAGTCACTAGCATGTGTTTTATGCTGTGCTaGTCTGGCAAGTCACAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: EFYSSLRLSLLSLRVTSMCFMLC*SGKSQS Trigger: TGACTGTGACTTGCCAGAGCAGCACAGCATAAAACA...CATGCTAGTGACTCTAAGACTCAAAAGACTAAGCCTCAGAGAGGAGTAAAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 90 bp | AACTTATCAGAGCACTGCACAGGGTCAATTTCTTTTATCTGTGTGTaGTTCTCTGCTAAAGGCCCACCTGCCTGTAAATTAGGTGATAAA | + |
|
Preference number: 2 (lower is better) Translates to: NLSEHCTGSISFICV*FSAKGPPACKLGDK Trigger: TTTATCACCTAATTTACAGGCAGGTGGGCCTTTAGCAGAGAACAACACACAGATAAAAGAAATTGACCCTGTGCAGTGCTCTGATAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAGTACTATCTGAAACTTCTTCAGTCTTGACACCTCTTGGAGCTTGTATTTGTTCCTTTCTGGACCTTTaGAGACCCTGTTCTTCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: EVLSETSSVLTPLGACICSFLDL*RPCSSS Trigger: ACTAGAAGAACAGGGTCTTCAAAGGTCCAGAAAGGA...ACAAATACAAGCTCCAAGAGGTGTCAAGACTGAAGAAGTTTCAGATAGTACTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTGACTATCACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGTTGCTCTCACAACATTaGTTTCAGCAGTGTTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: SDYHSSSVFSLHCGSNIRLLSQH*FQQCFL Trigger: GAGAAAACACTGCTGAAAGCAATGTTGTGAGAGCAA...CCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGTGATAGTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGAGACAGACTTTTTGGTTTCTGTAGATaGTTGCTGTTTATGGCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TAHQYFLCTVDPTSGDRLFGFCR*LLFMAV Trigger: GACTGCCATAAACAGCAAGCATCTACAGAAACCAAA...AAGTCTGTCTCCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTAACTCAGAAGGCCTCTCTTGGACGGAAAATGAAGCTGTTTCCTGGGTTAGATCCTCCAGTTTAAGCTaGAACACATTTTTGTTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: VNSEGLSWTENEAVSWVRSSSLS*NTFLLV Trigger: TACTAACAAAAATGTGTTCCAGCTTAAACTGGAGGA...TCTAACCCAGGAAACAGCTTCATTTTCCGTCCAAGAGAGGCCTTCTGAGTTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATTTTACTCCTCTCTGAGGCTTAGTCTTTTGAGTCTTAGAGTCACTAGCATGAGTGCACAGGTGGTCTaGAAATTGGGTGAAAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: EFYSSLRLSLLSLRVTSMSAQVV*KLGENK Trigger: TTTATTTTCACCCAATTTTCAGACCACCTGTGCACT...CATGCTAGTGACTCTAAGACTCAAAAGACTAAGCCTCAGAGAGGAGTAAAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR GCA 72 bp | GGCTCGACTGACTTTAAACGTTGGGCTCTCCATTTGTaGCGGCCTCTCCCTTTGGACTGCTCCTTCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GSTDFKRWALHL*RPLPLDCSFSG Trigger: CCCACTGAAGGAGCAGTCCAAAGGGAGAGGCCGGCACAAATGGAGAGCCCAACGTTTAAAGTCAGTCGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CCA 72 bp | AACGTTGGGCTCTCCATTTGTGCCGGCCTCTCCCTTTaGACTGCTCCTTCAGTGGGATCACTTGCTCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: NVGLSICAGLSL*TAPSVGSLALT Trigger: TGTGAGAGCAAGTGATCCCACTGAAGGAGCAGTCCAAAGGGAGAGGCCGGCACAAATGGAGAGCCCAACGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR GCA 72 bp | GTACAGGACACTCAGGAATACTTGTCAGGTTGTAGGTaGCACTGTTGGTGTGACAGCGCTGTAACCACCGTG | + |
|
Preference number: 3 (lower is better) Translates to: VQDTQEYLSGCR*HCWCDSAVTTV Trigger: CACGGTGGTTACAGCGCTGTCACACCAACAGTGGCACCTACAACCTGACAAGTATTCCTGAGTGTCCTGTAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CCA 72 bp | GAAGGCCTCTCTTGGACGGAAAATGAAGCTGTTTCCTaGGTTAGAGATTCTGCAGTAGTCCAGGCTCGACTG | + |
|
Preference number: 3 (lower is better) Translates to: EGLSWTENEAVS*VRDSAVVQARL Trigger: CAGTCGAGCCTGGACTACTGCAGAATCTCTAACCCAGGAAACAGCTTCATTTTCCGTCCAAGAGAGGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CCA 72 bp | TGGGCCACTGTGTTGGCTTTGCTTGAAGTTTGTGGCTaGCTGACAGTGGGTTTTCTGTTCTGCACAAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: WATVLALLEVCG*LTVGFLFCTSP Trigger: AGGACTTGTGCAGAACAGAAAACCCACTGTCAGCCAGCCACAAACTTCAAGCAAAGCCAACACAGTGGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCACTGTGGATCCAACATCAGGAGACAGACTTGCCCTTGGCTGGCTGCTCAGTCTTGGAGCTTGTATTaGTTCAGTTGTACTTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LHCGSNIRRQTCPWLAAQSWSLY*FSCTWW Trigger: CCACCAAGTACAACTGAACAAATACAAGCTCCAAGA...CTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGGATCCACAGTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR GCA 72 bp | CCTCTCCCTTTGGACTGCTCCTTCAGTGGGATCACTTaGTCTCACAACATTGCTTTCAGCAGTGTTTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PLPLDCSFSGIT*SHNIAFSSVFS Trigger: GGAGAAAACACTGCTGAAAGCAATGTTGTGAGAGCAAGTGATCCCACTGAAGGAGCAGTCCAAAGGGAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTTCGATGGGTACAATATACTGCTCCGTCTTTCAGGAAAGCTGTGCCATTTGGCCACTGTGTTGGCTTaGCTTGAAGTTTGTGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: DFDGYNILLRLSGKLCHLATVLA*LEVCGW Trigger: CCAGCCACAAACTTCAAGCAAAGCCAACACAGTGGC...CAAATGGCACAGCTTTCCTGAAAGACGGAGCAGTATATTGTACCCATCGAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR TCA 72 bp | TTTACCCTGAGTTTGGGCCACTGTGTTGGCTTTGCTTaGAGTTTGTGGCTGGCTGACAGTGGGTTTTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: FTLSLGHCVGFA*SLWLADSGFSV Trigger: AACAGAAAACCCACTGTCAGCCAGCCACAAACTTCAAGCAAAGCCAACACAGTGGCCCAAACTCAGGGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCAAAGCTAAAGCCTAAAGATACAGAAGAGTTCAAAGGCACACTGTCTATTCGTTGGGCTCTCCATTaGTGCCGGCCTCTCCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LAKLKPKDTEEFKGTLSIRWALH*CRPLPL Trigger: CAAAGGGAGAGGCCGGCACAAATGGAGAGCCCAACG...AATAGACAGTGTGCCTTTGAACTCTTCTGTATCTTTAGGCTTTAGCTTTGCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCCAGCAGCAGAATGTACAGGACACTCAGGAATACTTGTCAGGTTGTAGGTCAGCCGCACCCCATTTaGTTCATGGACACTGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSSSRMYRTLRNTCQVVGQPHPI*FMDTVF Trigger: AAACACAGTGTCCATGAACAAAATGGGGTGCGGCTG...ACCTACAACCTGACAAGTATTCCTGAGTGTCCTGTACATTCTGCTGCTGGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAACATCAGGAGACAGACTTGCCCTTGGCTGGCTGCTCAGAAGTGGTATTAATGGTTTCTGTAGATGCTaGCTGTTTATGGCAGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PTSGDRLALGWLLRSGINGFCRC*LFMAVR Trigger: TCTGACTGCCATAAACAGCAAGCATCTACAGAAACC...ATTAATACCACTTCTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR TCA 72 bp | TTAGAACAGGTGTCTGAGAACGGGAGACTACTTTCTTaGGTCCCCTGGTTCAAATGGTACTCTGTTGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LEQVSENGRLLS*VPWFKWYSVGS Trigger: GCTTCCAACAGAGTACCATTTGAACCAGGGGACTCAAGAAAGTAGTCTCCCGTTCTCAGACACCTGTTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR GCA 72 bp | CCATTTTGTTCATGGACACTGTGTTTTATGCTGTGCTaGTCTGGCAAGTCACAGTCAGGAGGGTTGTTACAC | + |
|
Preference number: 3 (lower is better) Translates to: PFCSWTLCFMLC*SGKSQSGGLLH Trigger: GTGTAACAACCCTCCTGACTGTGACTTGCCAGAGCAGCACAGCATAAAACACAGTGTCCATGAACAAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CCA 72 bp | TGCTCTTCAGCTGACAGGGCACAGACATTGGTTGGTTaGGACAGATTTGGTTTCTGTAGATGCTTGCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: CSSADRAQTLVG*DRFGFCRCLLF Trigger: AAACAGCAAGCATCTACAGAAACCAAATCTGTCCCAACCAACCAATGTCTGTGCCCTGTCAGCTGAAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAACATCAGGAGACAGACTTGCCCTTGGCTGGCTGCTCAGAAGTGGTATTAATGCTTGTGATCATTTTTaGACAATGTTGAAGGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PTSGDRLALGWLLRSGINACDHF*TMLKAR Trigger: CCTTGCCTTCAACATTGTCAAAAAATGATCACAAGC...ATTAATACCACTTCTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAACATCAGGAGACAGACTTGCCCTTGGCTGGCTGCTCAGAAGTGGTATTAATTTTGTTCAGTTGTACTaGGTGGGACATTTTGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PTSGDRLALGWLLRSGINFVQLY*VGHFVQ Trigger: TTGGACAAAATGTCCCACCAAGTACAACTGAACAAA...ATTAATACCACTTCTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CCA 72 bp | GTTCTGCTTTCCCAAGTTAACTCAGAAGGCCTCTCTTaGACGGAAAATGAAGCTGTTTCCTGGGTTAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VLLSQVNSEGLS*TENEAVSWVRD Trigger: ATCTCTAACCCAGGAAACAGCTTCATTTTCCGTCCAAGAGAGGCCTTCTGAGTTAACTTGGGAAAGCAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTTTGGACTGCTCCTTCAGTGGGATCACTTGCTCTCACAACATTGCTTTCACAAGACTGTCTATACTaGAGAGAGTTTCAGAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: SLWTAPSVGSLALTTLLSQDCLY*REFQNW Trigger: CCAATTCTGAAACTCTCTCAAGTATAGACAGTCTTG...TGAAAGCAATGTTGTGAGAGCAAGTGATCCCACTGAAGGAGCAGTCCAAAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR GCA 72 bp | GGGTACAATATACTGCTCCGTCTTTCAGGAAAGCTGTaGCATTTGAATTGGCTTTTGCTAAGGTTTGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: GYNILLRLSGKL*HLNWLLLRFGT Trigger: AGTGCCAAACCTTAGCAAAAGCCAATTCAAATGGCACAGCTTTCCTGAAAGACGGAGCAGTATATTGTACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CCA 72 bp | GTGGATCCAACATCAGGAGACAGACTTGCCCTTGGCTaGCTGCTCAGAAGTGGTATTAATTGTAAAGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: VDPTSGDRLALG*LLRSGINCKVF Trigger: AAATACTTTACAATTAATACCACTTCTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGGATCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGACTATCACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGGAAACTTCTTCAGTCTaGACACCTCTTGGAGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SDYHSSSVFSLHCGSNIRETSSV*TPLGAC Trigger: ACAAGCTCCAAGAGGTGTCAAGACTGAAGAAGTTTC...CCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGTGATAGTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGAGACAGACTTACAGACATTGGTTGGTaGGGACAGATTTGGTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TAHQYFLCTVDPTSGDRLTDIGW*GQIWFL Trigger: CAGAAACCAAATCTGTCCCAACCAACCAATGTCTGT...AAGTCTGTCTCCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR TCA 72 bp | GGGTTTTCTGTTCTGCACAAGTCCTTTCTGGACCTTTaGAGACCCTGTTCTTCTAGTGAATTTTACTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GFSVLHKSFLDL*RPCSSSEFYSS Trigger: AGAGGAGTAAAATTCACTAGAAGAACAGGGTCTTCAAAGGTCCAGAAAGGACTTGTGCAGAACAGAAAACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR TCA 72 bp | GAAGCACAGATGCTGGACTTAAACAGCTCTGTGTCATaGCATTTTGAGAATGTTCAGGTATGGCTGATTGAC | + |
|
Preference number: 3 (lower is better) Translates to: EAQMLDLNSSVS*HFENVQVWLID Trigger: GTCAATCAGCCATACCTGAACATTCTCAAAATGTCATGACACAGAGCTGTTTAAGTCCAGCATCTGTGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR GCA 72 bp | TGGTTGGTTGGGACAGATTTGGTTTCTGTAGATGCTTaGTGTTTATGGCAGTCAGAATTTCATCTTCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WLVGTDLVSVDA*CLWQSEFHLQA Trigger: TGCCTGAAGATGAAATTCTGACTGCCATAAACAGCAAGCATCTACAGAAACCAAATCTGTCCCAACCAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGACTATCACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGCATTTGAATTGGCTTTaGCTAAGGTTTGGCACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SDYHSSSVFSLHCGSNIRHLNWL*LRFGTQ Trigger: CTGAGTGCCAAACCTTAGCAAAAGCCAATTCAAATG...CCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGTGATAGTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGAGACAGACTTTCATTTTGGTGTCCATaGATTCTTCTTCTCCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: TAHQYFLCTVDPTSGDRLSFWCP*ILLLHG Trigger: CCCATGGAGAAGAAGAATCAATGGACACCAAAATGA...AAGTCTGTCTCCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR TCA 72 bp | TTCTTCACGCTCTCCAGCCTCAAGACTGTCTATACTTaGGAGAGTTTCAGAATTGGTTATCTGATTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: FFTLSSLKTVYT*ESFRIGYLIDF Trigger: GAAGTCAATCAGATAACCAATTCTGAAACTCTCTCAAGTATAGACAGTCTTGAGGCTGGAGAGCGTGAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR TCA 72 bp | GCTGTTTATGGCAGTCAGAATTTCATCTTCAGGCACTaGAGAATTCATGAGGTTTTCTGCCACCAAAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: AVYGSQNFIFRH*RIHEVFCHQKL Trigger: GAGTTTTTGGTGGCAGAAAACCTCATGAATTCTTCAGTGCCTGAAGATGAAATTCTGACTGCCATAAACAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTACTATCTGAAACTTCTTCAGTCTTGACACCTCTTGGAGCTTGTATTTGTCTTCAGTGGGATCACTaGCTCTCACAACATTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: EVLSETSSVLTPLGACICLQWDH*LSQHCF Trigger: AAAGCAATGTTGTGAGAGCAAGTGATCCCACTGAAG...ACAAATACAAGCTCCAAGAGGTGTCAAGACTGAAGAAGTTTCAGATAGTACTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR TCA 72 bp | ATGGGAGAATGGATTCTTCTTCAGTATTCCTATGAGTaGAAGACTGGTAGCTTTCTTCACAAACAGGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: MGEWILLQYSYE*KTGSFLHKQDF Trigger: GAAGTCCTGTTTGTGAAGAAAGCTACCAGTCTTTCACTCATAGGAATACTGAAGAAGAATCCATTCTCCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CCA 72 bp | CTTCTTGTAACAGTAGAATCAGTGGTTCTCTCATTTTaGTGTCCATTGATTCTTCTTCTCCATGGGAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: LLVTVESVVLSF*CPLILLLHGRM Trigger: CATTCTCCCATGGAGAAGAAGAATCAATGGACACCAAAATGAGAGAACCACTGATTCTACTGTTACAAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 72 bp | AAACGTTGGGCTCTCCATTTGTGCCGGCCTCTCCCTTaGGACTGCTCCTTCAGTGGGATCACTTGCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KRWALHLCRPLP*DCSFSGITCSH Trigger: GTGAGAGCAAGTGATCCCACTGAAGGAGCAGTCCAAAGGGAGAGGCCGGCACAAATGGAGAGCCCAACGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 72 bp | ATGCTGTGCTGCTCTGGCAAGTCACAGTCAGGAGGGTaGTTACACAGTGCTGCTGATGGGCCACTCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MLCCSGKSQSGG*LHSAADGPLSF Trigger: AAAAGAGAGTGGCCCATCAGCAGCACTGTGTAACAACCCTCCTGACTGTGACTTGCCAGAGCAGCACAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | TTGCACTGTGGATCCAACATCAGGAGACAGACTTGCCCTTGGCTGGCTGCTCAGAGAAGTAACTGGGGTTaGAGGGTGAGGGAGATATCT | + |
|
Preference number: 4 (lower is better) Translates to: LHCGSNIRRQTCPWLAAQRSNWG*RVREIS Trigger: AGATATCTCCCTCACCCTCCAACCCCAGTTACTTCT...CTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGGATCCACAGTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR TCA 90 bp | GACTTCGATGGGTACAATATACTGCTCCGTCTTTCAGGAAAGCTGTGCCATTTGAGGGGTGGGGCTGGTTaGCTTGGATGCCTGGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: DFDGYNILLRLSGKLCHLRGGAG*LGCLDK Trigger: TTTATCCAGGCATCCAAGTCAACCAGCCCCACCCCT...CAAATGGCACAGCTTTCCTGAAAGACGGAGCAGTATATTGTACCCATCGAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCCAGCAGCAGAATGTACAGGACACTCAGGAATACTTGTCAGGTTGTAGGTGTTCAGGCAAAGGAGTaGTACAAGAGAGGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSSRMYRTLRNTCQVVGVQAKE*YKRGVG Trigger: CCCCACCCCTCTCTTGTATCACTCCTTTGCCTGAAC...ACCTACAACCTGACAAGTATTCCTGAGTGTCCTGTACATTCTGCTGCTGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGGCAATCATCTACAGCATTTTCTAAGTTAGCACTTTCATCAAACCACCGCACGTCGAAGGACAGGTaGCCCAGAAGGAATAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GWQSSTAFSKLALSSNHRTSKDR*PRRNRV Trigger: GACCCTATTCCTTCTGGGCCACCTGTCCTTCGACGT...GCGGTGGTTTGATGAAAGTGCTAACTTAGAAAATGCTGTAGATGATTGCCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTTTGGACTGCTCCTTCAGTGGGATCACTTGCTCTCACAACATTGCTTTCAAGTTTCCAAAGGGGTTaGGGAAACAACCAGTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLWTAPSVGSLALTTLLSSFQRG*GNNQSS Trigger: GCTCGACTGGTTGTTTCCCCAACCCCTTTGGAAACT...TGAAAGCAATGTTGTGAGAGCAAGTGATCCCACTGAAGGAGCAGTCCAAAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 72 bp | TTGCTCTCTCCTCTTCTGCAGGCCGACCAGGCTTGTTaGGCAAAGCTAAAGCCTAAAGATACAGAAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSPLLQADQAC*AKLKPKDTEEF Trigger: GAACTCTTCTGTATCTTTAGGCTTTAGCTTTGCCAAACAAGCCTGGTCGGCCTGCAGAAGAGGAGAGAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 72 bp | GCACTGTGGATCCAACATCAGGAGACAGACTTGCCCTaGGCTGGCTGCTCAGAAGTGGTATTAATTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALWIQHQETDLP*AGCSEVVLIVK Trigger: CTTTACAATTAATACCACTTCTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGGATCCACAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCTTTCCAGCAGCAGAATGTACAGGACACTCAGGAATACTTGTCAGGTTGTACTGCTCTCCTTCTCTaGGAAACAGGAACGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSFQQQNVQDTQEYLSGCTALLL*ETGTWA Trigger: TGCCCACGTTCCTGTTTCTCAGAGAAGGAGAGCAGT...ACAACCTGACAAGTATTCCTGAGTGTCCTGTACATTCTGCTGCTGGAAAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGCTCTGGCAAGTCACAGTCAGGAGGGTTGTTACACAGTGCTGCTGATGTTTGTTGCTGGCCTGTaGAAAAGAGGAATGTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: CAALASHSQEGCYTVLLMFVAGL*KRGMFT Trigger: AGTAAACATTCCTCTTTTCCACAGGCCAGCAACAAA...CATCAGCAGCACTGTGTAACAACCCTCCTGACTGTGACTTGCCAGAGCAGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCTTTCCAGCAGCAGAATGTACAGGACACTCAGGAATACTTGTCAGGTTGTCACAGGTCTTGGGGGTaGGAAAAACAACTGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSFQQQNVQDTQEYLSGCHRSWG*EKQLGS Trigger: GCTACCCAGTTGTTTTTCCCACCCCCAAGACCTGTG...ACAACCTGACAAGTATTCCTGAGTGTCCTGTACATTCTGCTGCTGGAAAGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGGCAATCATCTACAGCATTTTCTAAGTTAGCACTTTCATCAAACCACCGCAGTAGAGGGGACAGATaGAAGGACACAGGTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GWQSSTAFSKLALSSNHRSRGDR*KDTGLG Trigger: CCCAAGACCTGTGTCCTTCCATCTGTCCCCTCTACT...GCGGTGGTTTGATGAAAGTGCTAACTTAGAAAATGCTGTAGATGATTGCCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGGCAATCATCTACAGCATTTTCTAAGTTAGCACTTTCATCAAACCACCGCCGGCAAAGAAGAGGATaGAGAATGACAGGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GWQSSTAFSKLALSSNHRRQRRG*RMTGRW Trigger: CCACCTCCCTGTCATTCTCCATCCTCTTCTTTGCCG...GCGGTGGTTTGATGAAAGTGCTAACTTAGAAAATGCTGTAGATGATTGCCACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | GACTTCGATGGGTACAATATACTGCTCCGTCTTTCAGGAAAGCTGTGCCATTTGAAAAGCCAGATAAGCTaGAGGCAAACAGGGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DFDGYNILLRLSGKLCHLKSQIS*RQTGRG Trigger: CCCTCTCCCTGTTTGCCTCCAGCTTATCTGGCTTTT...CAAATGGCACAGCTTTCCTGAAAGACGGAGCAGTATATTGTACCCATCGAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR TCA 90 bp | GACTTCGATGGGTACAATATACTGCTCCGTCTTTCAGGAAAGCTGTGCCATTTGTGTGAAAGTAGAAGGTaGCGACGGCAAAGAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DFDGYNILLRLSGKLCHLCESRR*RRQRRG Trigger: TCCTCTTCTTTGCCGTCGTCACCTTCTACTTTCACA...CAAATGGCACAGCTTTCCTGAAAGACGGAGCAGTATATTGTACCCATCGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGAGACAGACTTACTTTCTTCCCCCAGTaGGGAGGATTGAAGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TAHQYFLCTVDPTSGDRLTFFPQ*GGLKGW Trigger: CCATCCCTTCAATCCTCCTCACTGGGGGAAGAAAGT...AAGTCTGTCTCCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCTGCTCTGGCAAGTCACAGTCAGGAGGGTTGTTACACAGTGCTGCTGATGTGCTGTAGTAGCATCTaGCGTTCTTCTTCTAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: CAALASHSQEGCYTVLLMCCSSI*RSSSKF Trigger: AAATTTAGAAGAAGAACGCCAGATGCTACTACAGCA...CATCAGCAGCACTGTGTAACAACCCTCCTGACTGTGACTTGCCAGAGCAGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | GTTAACTCAGAAGGCCTCTCTTGGACGGAAAATGAAGCTGTTTCCTGGGTTAGAAGGATTGGAGATAGCTaGACAAGCAGGAATGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: VNSEGLSWTENEAVSWVRRIGDS*TSRNGS Trigger: CGATCCATTCCTGCTTGTCCAGCTATCTCCAATCCT...TCTAACCCAGGAAACAGCTTCATTTTCCGTCCAAGAGAGGCCTTCTGAGTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCTTTCCAGCAGCAGAATGTACAGGACACTCAGGAATACTTGTCAGGTTGTAAAGCTAGAAGTAACTaGGGTTGGAGGGTGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSFQQQNVQDTQEYLSGCKARSN*GWRVRE Trigger: CTCCCTCACCCTCCAACCCCAGTTACTTCTAGCTTT...ACAACCTGACAAGTATTCCTGAGTGTCCTGTACATTCTGCTGCTGGAAAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGAGACAGACTTGGAAGAACTTTGGGATaGAGGACGTCGAAGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TAHQYFLCTVDPTSGDRLGRTLG*RTSKDR Trigger: CCTGTCCTTCGACGTCCTCCATCCCAAAGTTCTTCC...AAGTCTGTCTCCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGAGACAGACTTGATACAAGAGAGGGGTaGGGCTGGTTGACTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TAHQYFLCTVDPTSGDRLDTREG*GWLTWM Trigger: CATCCAAGTCAACCAGCCCCACCCCTCTCTTGTATC...AAGTCTGTCTCCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | AGTGACTATCACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGAGAATGACAGGGAGGTaGGTGGGAGAGAATCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SDYHSSSVFSLHCGSNIRRMTGR*VGENQG Trigger: GCCTTGATTCTCTCCCACCCACCTCCCTGTCATTCT...CCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGTGATAGTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | CCAACATCAGGAGACAGACTTGCCCTTGGCTGGCTGCTCAGAAGTGGTATTAATAGGAATCAAAGGAGATaGGGAAGTAGAGATCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PTSGDRLALGWLLRSGINRNQRR*GSRDRD Trigger: ATCTCGATCTCTACTTCCCCATCTCCTTTGATTCCT...ATTAATACCACTTCTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 72 bp | CTGACAGGGCACAGACATTGGTTGGTTGGGACAGATTaGGTTTCTGTAGATGCTTGCTGTTTATGGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTGHRHWLVGTD*VSVDACCLWQS Trigger: TGACTGCCATAAACAGCAAGCATCTACAGAAACCAAATCTGTCCCAACCAACCAATGTCTGTGCCCTGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR TCA 90 bp | TATCTTCATCAAAGCAGTCTAAATGAGCTGCTTGTAGATTTGCTGACTGAAGGGACTGGGGTTGGAGGGTaGGGGAGATATCTGATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YLHQSSLNELLVDLLTEGTGVGG*GRYLIG Trigger: TCCTATCAGATATCTCCCTCACCCTCCAACCCCAGT...CCCTTCAGTCAGCAAATCTACAAGCAGCTCATTTAGACTGCTTTGATGAAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTTTCCAGCAGCAGAATGTACAGGACACTCAGGAATACTTGTCAGGTTGTGGTAGAATGCTGTGCTaGAAGCAACTGTTTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSFQQQNVQDTQEYLSGCGRMLC*KQLFGS Trigger: AGACCCAAACAGTTGCTTGCAGCACAGCATTCTACC...ACAACCTGACAAGTATTCCTGAGTGTCCTGTACATTCTGCTGCTGGAAAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTTTCCAGCAGCAGAATGTACAGGACACTCAGGAATACTTGTCAGGTTGTTTGGGTAGAATGCTGTaGTGCAAGCAACTGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFQQQNVQDTQEYLSGCLGRML*CKQLFG Trigger: CCCAAACAGTTGCTTGCAGCACAGCATTCTACCCAA...ACAACCTGACAAGTATTCCTGAGTGTCCTGTACATTCTGCTGCTGGAAAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCCAGCAGCAGAATGTACAGGACACTCAGGAATACTTGTCAGGTTGTAGGTGGCATTAGAGTTGTTTaGGTAGAATGCTGTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSSRMYRTLRNTCQVVGGIRVV*VECCAA Trigger: TGCAGCACAGCATTCTACCCAAACAACTCTAATGCC...ACCTACAACCTGACAAGTATTCCTGAGTGTCCTGTACATTCTGCTGCTGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 72 bp | CTTCATCAAAGCAGTCTAAATGAGCTGCTTGTAGATTaGCTGACTGAAGGGGAACAGAGTTCTGCTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHQSSLNELLVD*LTEGEQSSAGL Trigger: CAACCCAGCAGAACTCTGTTCCCCTTCAGTCAGCAAATCTACAAGCAGCTCATTTAGACTGCTTTGATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 72 bp | CCTAAATCAGTAGCATTTTCTGGGACAGAATCAGCCTaGGCTTTCTTTCCAGCAGCAGAATGTACAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: PKSVAFSGTESA*AFFPAAECTGH Trigger: GTGTCCTGTACATTCTGCTGCTGGAAAGAAAGCCAAGGCTGATTCTGTCCCAGAAAATGCTACTGATTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR TCA 90 bp | ATACTAAGTGTGATGTATATTTCTTCACGCTCTCCAGCCTCAAGACTGTCTATAGGCCTGGCACTGATTTaGCAATGTGGCTTGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILSVMYISSRSPASRLSIGLALI*QCGLWN Trigger: GTTCCACAAGCCACATTGTCAAATCAGTGCCAGGCC...TATAGACAGTCTTGAGGCTGGAGAGCGTGAAGAAATATACATCACACTTAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | CCAACATCAGGAGACAGACTTGCCCTTGGCTGGCTGCTCAGAAGTGGTATTAATCTTTCTTCTTGTTTTTaGCGTTTCTCTTCGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTSGDRLALGWLLRSGINLSSCF*RFSSKA Trigger: AGCTTTCGAAGAGAAACGCCAAAAACAAGAAGAAAG...ATTAATACCACTTCTGAGCAGCCAGCCAAGGGCAAGTCTGTCTCCTGATGTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGGCAATCATCTACAGCATTTTCTAAGTTAGCACTTTCATCAAACCACCGCCAGGATCAGGAATGTTaGAAGAACTTTGGGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GWQSSTAFSKLALSSNHRQDQEC*KNFGME Trigger: CTCCATCCCAAAGTTCTTCCAACATTCCTGATCCTG...GCGGTGGTTTGATGAAAGTGCTAACTTAGAAAATGCTGTAGATGATTGCCACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCCAGCAGCAGAATGTACAGGACACTCAGGAATACTTGTCAGGTTGTAGGTGATGCCTGGATAAACTaGAAGGTTTCAAAACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSSSRMYRTLRNTCQVVGDAWIN*KVSKQG Trigger: TCCCTGTTTTGAAACCTTCCAGTTTATCCAGGCATC...ACCTACAACCTGACAAGTATTCCTGAGTGTCCTGTACATTCTGCTGCTGGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGAGACAGACTTGGAGGAACTGGATTTTaGAAAACTGCTCTCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAHQYFLCTVDPTSGDRLGGTGF*KTALLL Trigger: GAGAAGGAGAGCAGTTTTTCAAAATCCAGTTCCTCC...AAGTCTGTCTCCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR TCA 90 bp | TCCCTTTGGACTGCTCCTTCAGTGGGATCACTTGCTCTCACAACATTGCTTTCATTTAAGTTGGACTCTTaGATTTGTTTTAGGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLWTAPSVGSLALTTLLSFKLDS*ICFRAS Trigger: AGAGGCCCTAAAACAAATTCAAGAGTCCAACTTAAA...TGAAAGCAATGTTGTGAGAGCAAGTGATCCCACTGAAGGAGCAGTCCAAAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR GCA 90 bp | TATCTTCATCAAAGCAGTCTAAATGAGCTGCTTGTAGATTTGCTGACTGAAGGGGGAGAGGGATATGAATaGAAGGGAGAGGGCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YLHQSSLNELLVDLLTEGGEGYE*KGEGKR Trigger: TCTTTTGCCCTCTCCCTTGCATTCATATCCCTCTCC...CCCTTCAGTCAGCAAATCTACAAGCAGCTCATTTAGACTGCTTTGATGAAGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGAGACAGACTTTCGCCAATTTGTTGCTaGCCTGTGGAAAAGAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TAHQYFLCTVDPTSGDRLSPICC*PVEKRN Trigger: ATTCCTCTTTTCCACAGGCCAGCAACAAATTGGCGA...AAGTCTGTCTCCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 72 bp | TTGGTTGGTTGGGACAGATTTGGTTTCTGTAGATGCTaGCTGTTTATGGCAGTCAGAATTTCATCTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVGWDRFGFCRC*LFMAVRISSSG Trigger: GCCTGAAGATGAAATTCTGACTGCCATAAACAGCAAGCATCTACAGAAACCAAATCTGTCCCAACCAACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR TCA 90 bp | AGTGACTATCACAGCTCATCAGTATTTTCTTTGCACTGTGGATCCAACATCAGGTCCGGTTTGACTCCATaGAATATTTACGTGCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SDYHSSSVFSLHCGSNIRSGLTP*NIYVLD Trigger: ATCGAGCACGTAAATATTTCATGGAGTCAAACCGGA...CCTGATGTTGGATCCACAGTGCAAAGAAAATACTGATGAGCTGTGATAGTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 72 bp | TCTAGTGAATTTTACTCCTCTCTGAGGCTTAGTCTTTaGAGTCTTAGAGTCACTAGCATGTACAGGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSEFYSSLRLSL*SLRVTSMYRGF Trigger: AAAGCCCCTGTACATGCTAGTGACTCTAAGACTCAAAAGACTAAGCCTCAGAGAGGAGTAAAATTCACTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCAATCATCTACAGCATTTTCTAAGTTAGCACTTTCATCAAACCACCGCTTTTCTTCTCCGGTTTaGCTCCATGAAATATTTACG | + |
|
Preference number: 4 (lower is better) Translates to: GWQSSTAFSKLALSSNHRFSSPV*LHEIFT Trigger: CGTAAATATTTCATGGAGTCAAACCGGAGAAGAAAA...GCGGTGGTTTGATGAAAGTGCTAACTTAGAAAATGCTGTAGATGATTGCCACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | TTGTACTTGGTGGGACATTTTGTCCAAAATGAGTTATTTGCTCGGTGTACTTCAGGAACGTGGGCACGCTaGAATTTTTCAGTAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYLVGHFVQNELFARCTSGTWAR*NFSVTS Trigger: AGAAGTTACTGAAAAATTCCAGCGTGCCCACGTTCC...TGAAGTACACCGAGCAAATAACTCATTTTGGACAAAATGTCCCACCAAGTACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | TATCTTCATCAAAGCAGTCTAAATGAGCTGCTTGTAGATTTGCTGACTGAAGGGGTTGACTTGGATGCCTaGATAAACTGGAAGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLHQSSLNELLVDLLTEGVDLDA*INWKVS Trigger: TGAAACCTTCCAGTTTATCCAGGCATCCAAGTCAAC...CCCTTCAGTCAGCAAATCTACAAGCAGCTCATTTAGACTGCTTTGATGAAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | TTGTACTTGGTGGGACATTTTGTCCAAAATGAGTTATTTGCTCGGTGTACTTCAGACAAGCATCAAACCTaGAAGAATGTTCAGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LYLVGHFVQNELFARCTSDKHQT*KNVQAK Trigger: CTTTGCCTGAACATTCTTCCAGGTTTGATGCTTGTC...TGAAGTACACCGAGCAAATAACTCATTTTGGACAAAATGTCCCACCAAGTACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 72 bp | ACAGTAGAATCAGTGGTTCTCTCATTTTGGTGTCCATaGATTCTTCTTCTCCATGGGAGAATGGATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVESVVLSFWCP*ILLLHGRMDSS Trigger: AGAAGAATCCATTCTCCCATGGAGAAGAAGAATCAATGGACACCAAAATGAGAGAACCACTGATTCTACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 72 bp | TGTACTTGGTGGGACATTTTGTCCAAAATGAGTTATTaGCTCGGTGTACTTCATTCCTATAGATCCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CTWWDILSKMSY*LGVLHSYRSRG Trigger: ACCTCTGGATCTATAGGAATGAAGTACACCGAGCAAATAACTCATTTTGGACAAAATGTCCCACCAAGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 72 bp | AACTTCTTCAGTCTTGACACCTCTTGGAGCTTGTATTaGTTCAGTTGTACTTGGTGGGACATTTTGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NFFSLDTSWSLY*FSCTWWDILSK Trigger: TTTGGACAAAATGTCCCACCAAGTACAACTGAACAAATACAAGCTCCAAGAGGTGTCAAGACTGAAGAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 72 bp | TCTTCTTGTAACAGTAGAATCAGTGGTTCTCTCATTTaGGTGTCCATTGATTCTTCTTCTCCATGGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSCNSRISGSLI*VSIDSSSPWEN Trigger: ATTCTCCCATGGAGAAGAAGAATCAATGGACACCAAAATGAGAGAACCACTGATTCTACTGTTACAAGAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTACTATCTGAAACTTCTTCAGTCTTGACACCTCTTGGAGCTTGTATTTGTTGGATTTTGAAAAACTaGTCTCCTTCTCTGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EVLSETSSVLTPLGACICWILKN*SPSLRN Trigger: GTTTCTCAGAGAAGGAGAGCAGTTTTTCAAAATCCA...ACAAATACAAGCTCCAAGAGGTGTCAAGACTGAAGAAGTTTCAGATAGTACTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CCA 90 bp | TATCTTCCTAAATCAGTAGCATTTTCTGGGACAGAATCAGCCTTGGCTTTCTTTACTGATTTGACAATGTaGCTTGTGGAACAGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YLPKSVAFSGTESALAFFTDLTM*LVEQIS Trigger: AGAAATCTGTTCCACAAGCCACATTGTCAAATCAGT...AAAGAAAGCCAAGGCTGATTCTGTCCCAGAAAATGCTACTGATTTAGGAAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 72 bp | AGCTTGTATTTGTTCAGTTGTACTTGGTGGGACATTTaGTCCAAAATGAGTTATTTGCTCGGTGTACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLYLFSCTWWDI*SKMSYLLGVLH Trigger: ATGAAGTACACCGAGCAAATAACTCATTTTGGACAAAATGTCCCACCAAGTACAACTGAACAAATACAAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR TCA 90 bp | AAGCTAAAGCCTAAAGATACAGAAGAGTTCAAAGGCACACTGTCTATTTCATATAACAGATTTCTGAACTaGCTGACAAGCATCAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: KLKPKDTEEFKGTLSISYNRFLN*LTSIKP Trigger: AGGTTTGATGCTTGTCAGTCAGTTCAGAAATCTGTT...ATATGAAATAGACAGTGTGCCTTTGAACTCTTCTGTATCTTTAGGCTTTAGCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| 3UTR CAA 72 bp | TGGCTGCTCAGAAGTGGTATTAATTGTAAAGTATTTTaGATGGAAGGGTTTTTGCGAATTGCTTCTTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: WLLRSGINCKVF*MEGFLRIASCT Trigger: TGTACAAGAAGCAATTCGCAAAAACCCTTCCATCAAAAATACTTTACAATTAATACCACTTCTGAGCAGCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS CCA 90 bp | GGCAGACCGCTGGCCAGAGAAGTAGGAATCAGGATTGGAGATAGCTaGACAAGCAGGAATGGATCGCCAATTTGTTGCTGGCCTGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GRPLAREVGIRIGDS*TSRNGSPICCWPVE Trigger: TTCCACAGGCCAGCAACAAATTGGCGATCCATTCCTGCTTGTCCAGCTATCTCCAATCCTGATTCCTACTTCTCTGGCCAGCGGTCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CAA 90 bp | TGTGCTGCTCTGGCAAGTCACAGTCAGGAGGGTTGTTACACAGTGCTGCTGATGGAATGGATCGCCAATTaGTTGCTGGCCTGTGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CAALASHSQEGCYTVLLMEWIAN*LLACGK Trigger: TTTTCCACAGGCCAGCAACAAATTGGCGATCCATTC...CATCAGCAGCACTGTGTAACAACCCTCCTGACTGTGACTTGCCAGAGCAGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS CCA 90 bp | CGAGCTGGAAGGGAACGGCGTATAAGTGCGGGCATTAGAGTTGTTTaGGTAGAATGCTGTGCTGCAAGCAACTGTTTGGGTCTGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RAGRERRISAGIRVV*VECCAASNCLGLKV Trigger: AACTTTCAGACCCAAACAGTTGCTTGCAGCACAGCATTCTACCCAAACAACTCTAATGCCCGCACTTATACGCCGTTCCCTTCCAGCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS CCA 90 bp | GGGAGGAAAGGAAGAAGAAATCATAAAAGAGGAGGAAGAAGGCACTaGAGAGGGAAAAGCCAGATAAGCTGGAGGCAAACAGGGAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRKGRRNHKRGGRRH*RGKSQISWRQTGRG Trigger: CCCTCTCCCTGTTTGCCTCCAGCTTATCTGGCTTTTCCCTCTCCAGTGCCTTCTTCCTCCTCTTTTATGATTTCTTCTTCCTTTCCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS CCA 90 bp | AGGCAGGCAGGTGGTCTACAAAGGCCTGGCACTGATTTGACAATGTaGCTTGTGGAACAGATTTCTGAACTGACTGACAAGCATCAAACC | + |
|
Preference number: 5 (lower is better) Translates to: RQAGGLQRPGTDLTM*LVEQISELTDKHQT Trigger: GGTTTGATGCTTGTCAGTCAGTTCAGAAATCTGTTCCACAAGCCACATTGTCAAATCAGTGCCAGGCCTTTGTAGACCACCTGCCTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CAA 90 bp | GTTAACTCAGAAGGCCTCTCTTGGACGGAAAATGAAGCTGTTTCCTGGGTTAGAGGAAGGACACAGGTCTaGGGGGTGGGAAAAACAACT | + |
|
Preference number: 5 (lower is better) Translates to: VNSEGLSWTENEAVSWVRGRTQV*GVGKTT Trigger: AGTTGTTTTTCCCACCCCCAAGACCTGTGTCCTTCC...TCTAACCCAGGAAACAGCTTCATTTTCCGTCCAAGAGAGGCCTTCTGAGTTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CAA 90 bp | GTTAACTCAGAAGGCCTCTCTTGGACGGAAAATGAAGCTGTTTCCTGGGTTAGATGGATCGCCAATTTGTaGCTGGCCTGTGGAAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VNSEGLSWTENEAVSWVRWIANL*LACGKE Trigger: CTCTTTTCCACAGGCCAGCAACAAATTGGCGATCCA...TCTAACCCAGGAAACAGCTTCATTTTCCGTCCAAGAGAGGCCTTCTGAGTTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CAA 90 bp | GGTGATGGAGTGACTTCAGGATCTTCTGCTCTTCAGCTGACAGGGCACAGACATTCTTTCTTCTTGTTTTaGGCGTTTCTCTTCGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GDGVTSGSSALQLTGHRHSFFLF*AFLFES Trigger: GCTTTCGAAGAGAAACGCCAAAAACAAGAAGAAAGA...ATGTCTGTGCCCTGTCAGCTGAAGAGCAGAAGATCCTGAAGTCACTCCATCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CAA 90 bp | TATCTTCATCAAAGCAGTCTAAATGAGCTGCTTGTAGATTTGCTGACTGAAGGGGAGTTTCCAAAGGGGTaGGGGAAACAACCAGTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: YLHQSSLNELLVDLLTEGEFPKG*GKQPVE Trigger: CTCGACTGGTTGTTTCCCCAACCCCTTTGGAAACTC...CCCTTCAGTCAGCAAATCTACAAGCAGCTCATTTAGACTGCTTTGATGAAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CAA 90 bp | TTGGCAAAGCTAAAGCCTAAAGATACAGAAGAGTTCAAAGGCACACTGTCTATTAGGCCTGGCACTGATTaGACAATGTGGCTTGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LAKLKPKDTEEFKGTLSIRPGTD*TMWLVE Trigger: TTCCACAAGCCACATTGTCAAATCAGTGCCAGGCCT...AATAGACAGTGTGCCTTTGAACTCTTCTGTATCTTTAGGCTTTAGCTTTGCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CAA 90 bp | TATCTTCATCAAAGCAGTCTAAATGAGCTGCTTGTAGATTTGCTGACTGAAGGGTCAGGATCAGGAATGTaGGAAGAACTTTGGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: YLHQSSLNELLVDLLTEGSGSGM*EELWDG Trigger: TCCATCCCAAAGTTCTTCCAACATTCCTGATCCTGA...CCCTTCAGTCAGCAAATCTACAAGCAGCTCATTTAGACTGCTTTGATGAAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS TCA 90 bp | TTTGGCGTTTCTCTTCGAAAGCTTTTCTTCTCCGGTTTGACTCCATaGAATATTTACGTGCTCGATTCCGACATAGTTTTTGTTGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: FGVSLRKLFFSGLTP*NIYVLDSDIVFVAV Trigger: TACAGCAACAAAAACTATGTCGGAATCGAGCACGTAAATATTTCATGGAGTCAAACCGGAGAAGAAAAGCTTTCGAAGAGAAACGCCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037397.8 ENSMUST00000238782.2 |
||
| CDS-3UTR CAA 90 bp | TTGTACTTGGTGGGACATTTTGTCCAAAATGAGTTATTTGCTCGGTGTACTTCAAACTTCTTCAAACTTTaGCTTCCTCTGCTGCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LYLVGHFVQNELFARCTSNFFKL*LPLLQD Trigger: ATCCTGCAGCAGAGGAAGCAAAAGTTTGAAGAAGTT...TGAAGTACACCGAGCAAATAACTCATTTTGGACAAAATGTCCCACCAAGTACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CAA 90 bp | GAATTTTACTCCTCTCTGAGGCTTAGTCTTTTGAGTCTTAGAGTCACTAGCATGGGTAGATTAGGGAAATaGCTAGAAAAGCTAGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: EFYSSLRLSLLSLRVTSMGRLGK*LEKLEV Trigger: TACTTCTAGCTTTTCTAGCAATTTCCCTAATCTACC...CATGCTAGTGACTCTAAGACTCAAAAGACTAAGCCTCAGAGAGGAGTAAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS-3UTR CAA 90 bp | AAGCTAAAGCCTAAAGATACAGAAGAGTTCAAAGGCACACTGTCTATTTCATATTGGAGGAACTGGATTTaGAAAAACTGCTCTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KLKPKDTEEFKGTLSISYWRNWI*KNCSPS Trigger: AGAAGGAGAGCAGTTTTTCAAAATCCAGTTCCTCCA...ATATGAAATAGACAGTGTGCCTTTGAACTCTTCTGTATCTTTAGGCTTTAGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS CCA 72 bp | TTCTGTGAGTCAGGATCAGGAATGTTGGAAGAACTTTaGGATGGAGGACGTCGAAGGACAGGTGGCCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FCESGSGMLEEL*DGGRRRTGGPE Trigger: TTCTGGGCCACCTGTCCTTCGACGTCCTCCATCCCAAAGTTCTTCCAACATTCCTGATCCTGACTCACAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS CCA 72 bp | AGGGAACGGCGTATAAGTGCGGGCATTAGAGTTGTTTaGGTAGAATGCTGTGCTGCAAGCAACTGTTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RERRISAGIRVV*VECCAASNCLG Trigger: ACCCAAACAGTTGCTTGCAGCACAGCATTCTACCCAAACAACTCTAATGCCCGCACTTATACGCCGTTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS CAA 72 bp | AGGCAGGCAGGTGGTCTACAAAGGCCTGGCACTGATTaGACAATGTGGCTTGTGGAACAGATTTCTGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: RQAGGLQRPGTD*TMWLVEQISEL Trigger: CAGTTCAGAAATCTGTTCCACAAGCCACATTGTCAAATCAGTGCCAGGCCTTTGTAGACCACCTGCCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS TCA 72 bp | AAGCATCAAACCTGGAAGAATGTTCAGGCAAAGGAGTaGTACAAGAGAGGGGTGGGGCTGGTTGACTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: KHQTWKNVQAKE*YKRGVGLVDLD Trigger: ATCCAAGTCAACCAGCCCCACCCCTCTCTTGTATCACTCCTTTGCCTGAACATTCTTCCAGGTTTGATGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS CAA 72 bp | GGCCCAGAAGGAATAGGGTCTGGTAGATTAGGGAAATaGCTAGAAAAGCTAGAAGTAACTGGGGTTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPEGIGSGRLGK*LEKLEVTGVGG Trigger: CCCTCCAACCCCAGTTACTTCTAGCTTTTCTAGCAATTTCCCTAATCTACCAGACCCTATTCCTTCTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS CAA 90 bp | AGAGAATCAAGGCAGGCAGGTGGTCTACAAAGGCCTGGCACTGATTaGACAATGTGGCTTGTGGAACAGATTTCTGAACTGACTGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: RESRQAGGLQRPGTD*TMWLVEQISELTDK Trigger: CTTGTCAGTCAGTTCAGAAATCTGTTCCACAAGCCACATTGTCAAATCAGTGCCAGGCCTTTGTAGACCACCTGCCTGCCTTGATTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS CCA 72 bp | GGTGGTCTACAAAGGCCTGGCACTGATTTGACAATGTaGCTTGTGGAACAGATTTCTGAACTGACTGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: GGLQRPGTDLTM*LVEQISELTDK Trigger: CTTGTCAGTCAGTTCAGAAATCTGTTCCACAAGCCACATTGTCAAATCAGTGCCAGGCCTTTGTAGACCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS GCA 72 bp | CGTATAAGTGCGGGCATTAGAGTTGTTTGGGTAGAATaGTGTGCTGCAAGCAACTGTTTGGGTCTGAAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RISAGIRVVWVE*CAASNCLGLKV Trigger: AACTTTCAGACCCAAACAGTTGCTTGCAGCACAGCATTCTACCCAAACAACTCTAATGCCCGCACTTATACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS TCA 72 bp | TTGGCGTTTCTCTTCGAAAGCTTTTCTTCTCCGGTTTaGCTCCATGAAATATTTACGTGCTCGATTCCGACA | + |
|
Preference number: 6 (lower is better) Translates to: LAFLFESFSSPV*LHEIFTCSIPT Trigger: TGTCGGAATCGAGCACGTAAATATTTCATGGAGTCAAACCGGAGAAGAAAAGCTTTCGAAGAGAAACGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037397.8 ENSMUST00000238782.2 |
||
| CDS CCA 72 bp | CAAGCAGGAATGGATCGCCAATTTGTTGCTGGCCTGTaGAAAAGAGGAATGTTTACTTCTGACTTTAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QAGMDRQFVAGL*KRGMFTSDFKL Trigger: CAACTTAAAGTCAGAAGTAAACATTCCTCTTTTCCACAGGCCAGCAACAAATTGGCGATCCATTCCTGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238782.2 |
||
| CDS CCA 72 bp | GCAGAATCTATAGCTCGCCAATTTGTTGCTGGCCTGTaGAAAAGAGGAATGTTTACTTCTGACTTTAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AESIARQFVAGL*KRGMFTSDFKL Trigger: CAACTTAAAGTCAGAAGTAAACATTCCTCTTTTCCACAGGCCAGCAACAAATTGGCGAGCTATAGATTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037397.8 |
||
| CDS TCA 72 bp | TCTCTTCGAAAGCTTTTCTTCTCCGGTTTGACTCCATaGAATATTTACGTGCTCGATTCCGACATAGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLRKLFFSGLTP*NIYVLDSDIVF Trigger: AAAAACTATGTCGGAATCGAGCACGTAAATATTTCATGGAGTCAAACCGGAGAAGAAAAGCTTTCGAAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037397.8 ENSMUST00000238782.2 |
||