RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP120 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000048799

Ensembl transcript IDs: ENSMUST00000049811.8, ENSMUST00000237062.2

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTCTGGAGGGTTACGGGCTTGCACTGGGCTCGCTGGGGTGCCTCTaGAAACAGACTGACTGCAGAGGGAGGGAAGCAGCTCCGTGGTGT +
Preference number: 1 (lower is better)
Translates to: ALEGYGLALGSLGCL*KQTDCRGREAAPWC
Trigger: ACACCACGGAGCTGCTTCCCTCCCTCTGCAGTCAGTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCCCGTAACCCTCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR TCA 90 bp TTATTTTTGGGAATCAGAATTCTTACTTTGTTTCAAGATGCTGCATaGCCTGGGAGATTGCTAATCTGCCTGCTCAGTGTCACGCAGAGG +
Preference number: 1 (lower is better)
Translates to: LFLGIRILTLFQDAA*PGRLLICLLSVTQR
Trigger: CCTCTGCGTGACACTGAGCAGGCAGATTAGCAATCTCCCAGGTCATGCAGCATCTTGAAACAAAGTAAGAATTCTGATTCCCAAAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR TCA 90 bp AAATCAGGACCATGTAACCATAATTCATATTTCAAATCCCTGCTATaGTCATCTGTCTCGTCACCCTCAAGTCCAGCAACCCCTCTGTTG +
Preference number: 1 (lower is better)
Translates to: KSGPCNHNSYFKSLL*SSVSSPSSPATPLL
Trigger: CAACAGAGGGGTTGCTGGACTTGAGGGTGACGAGACAGATGATCATAGCAGGGATTTGAAATATGAATTATGGTTACATGGTCCTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR CCA 90 bp AAGGGAGCAGGACACAGCGTGTTTAAAGTGCAACATATTCTCTCTTaGCTCAACATAAAAATTATACAGTGGGAACTACTGTGGTCAGTT +
Preference number: 1 (lower is better)
Translates to: KGAGHSVFKVQHILS*LNIKIIQWELLWSV
Trigger: AACTGACCACAGTAGTTCCCACTGTATAATTTTTATGTTGAGCCAAGAGAGAATATGTTGCACTTTAAACACGCTGTGTCCTGCTCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR-3UTR TCA 90 bp AGGGATAAGCTCGCTGTGAGGATGGGGTGGTTTGGAGAGCGCAGTGTGAAGGAGCCTCTGAAAACAGACTaGCTGCAGAGGGAGGGAAGC +
Preference number: 2 (lower is better)
Translates to: RDKLAVRMGWFGERSVKEPLKTD*LQREGS
Trigger: GCTTCCCTCCCTCTGCAGTCAGTCTGTTTTCAGAGG...CTCCTTCACACTGCGCTCTCCAAACCACCCCATCCTCACAGCGAGCTTATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR-3UTR TCA 90 bp GGCTTGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGACTGACTGCAGAGGGAGCAAATACCACAGGTTaGGGGGAAAAAGACTGGTCA +
Preference number: 2 (lower is better)
Translates to: GLHWARWGASENRLTAEGANTTG*GEKDWS
Trigger: TGACCAGTCTTTTTCCCCTCAACCTGTGGTATTTGC...TCCCTCTGCAGTCAGTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR-3UTR GCA 90 bp GGCTTGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGACTGACTGCAGAGGGAGTCTCTGCCCGAGACTaGTTTATTTTCAAAGTTGTC +
Preference number: 2 (lower is better)
Translates to: GLHWARWGASENRLTAEGVSARD*FIFKVV
Trigger: GACAACTTTGAAAATAAAGCAGTCTCGGGCAGAGAC...TCCCTCTGCAGTCAGTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR-3UTR CCA 90 bp TCTGGAGGGTTACGGGCTTGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGACCAAGCTATTTTCTCATaGTCTTCAAGTGGAGTCCAA +
Preference number: 2 (lower is better)
Translates to: SGGLRACTGLAGVPLKTDQAIFS*SSSGVQ
Trigger: TTGGACTCCACTTGAAGACCATGAGAAAATAGCTTG...GTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCCCGTAACCCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR-3UTR CCA 90 bp TGCAGAGGGAGGGAAGCAGCTCCGTGGTGTTCTCAGCTAATGTCGCTAGGTATCCTCATGGTCTTCAAGTaGAGTCCAATGAAATTTGGA +
Preference number: 2 (lower is better)
Translates to: CRGREAAPWCSQLMSLGILMVFK*SPMKFG
Trigger: TCCAAATTTCATTGGACTCCACTTGAAGACCATGAG...GATACCTAGCGACATTAGCTGAGAACACCACGGAGCTGCTTCCCTCCCTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR-3UTR CCA 90 bp GAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCATGAGTGTGAAGGAGCTCTaGAGGGTTACGGGCTTGCAC +
Preference number: 2 (lower is better)
Translates to: EPTLGQDLLKQNTSVPFMSVKEL*RVTGLH
Trigger: GTGCAAGCCCGTAACCCTCCAGAGCTCCTTCACACT...CATGAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR CAA 90 bp GGCAACCATTTTAACAAGAAGCCTCAGAGAGTCATGAGCAGGAGATaGTGGTCAGACCAAGCTATTTTCTCATGGTCTTCAAGTGGAGTC +
Preference number: 2 (lower is better)
Translates to: GNHFNKKPQRVMSRR*WSDQAIFSWSSSGV
Trigger: GACTCCACTTGAAGACCATGAGAAAATAGCTTGGTCTGACCACAATCTCCTGCTCATGACTCTCTGAGGCTTCTTGTTAAAATGGTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR-3UTR CCA 90 bp CTAGGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAACAGTGGGAACTACTGTaGTCAGTTCTCCTGGGACAA +
Preference number: 2 (lower is better)
Translates to: LGISFHSPFLSCIAITEKQWELL*SVLLGQ
Trigger: TTGTCCCAGGAGAACTGACCACAGTAGTTCCCACTG...TTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR-3UTR TCA 90 bp GAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCATGACTGTGTTTAAGCAATaGCTAATTTGTCAGCCAACA +
Preference number: 2 (lower is better)
Translates to: EPTLGQDLLKQNTSVPFMTVFKQ*LICQPT
Trigger: TGTTGGCTGACAAATTAGTCATTGCTTAAACACAGT...CATGAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR-3UTR TCA 90 bp GAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCATGTCAAGTGGAGTCCAATaGAATTTGGAACTTGATTTG +
Preference number: 2 (lower is better)
Translates to: EPTLGQDLLKQNTSVPFMSSGVQ*NLELDL
Trigger: CAAATCAAGTTCCAAATTTCATTGGACTCCACTTGA...CATGAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR-3UTR TCA 90 bp CTAGGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAAAAAACACAATTAAAATaGAGCCAGCATTGGAGAGGT +
Preference number: 2 (lower is better)
Translates to: LGISFHSPFLSCIAITEKKTQLK*SQHWRG
Trigger: ACCTCTCCAATGCTGGCTTCATTTTAATTGTGTTTT...TTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACCTAG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR CCA 72 bp ATGGGGTGGTTTGGAGAGCGCAGTGTGAAGGAGCTCTaGAGGGTTACGGGCTTGCACTGGGCTCGCTGGGGT +
Preference number: 3 (lower is better)
Translates to: MGWFGERSVKEL*RVTGLHWARWG
Trigger: ACCCCAGCGAGCCCAGTGCAAGCCCGTAACCCTCCAGAGCTCCTTCACACTGCGCTCTCCAAACCACCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR TCA 72 bp GGTTACGGGCTTGCACTGGGCTCGCTGGGGTGCCTCTaGAAACAGACTGACTGCAGAGGGAGGGAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: GYGLALGSLGCL*KQTDCRGREAA
Trigger: AGCTGCTTCCCTCCCTCTGCAGTCAGTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCCCGTAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR CCA 72 bp GAGCTCTGGAGGGTTACGGGCTTGCACTGGGCTCGCTaGGGTGCCTCTGAAAACAGACTGACTGCAGAGGGA +
Preference number: 3 (lower is better)
Translates to: ELWRVTGLHWAR*GASENRLTAEG
Trigger: TCCCTCTGCAGTCAGTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCCCGTAACCCTCCAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR CCA 72 bp AGTGTGAAGGAGCTCTGGAGGGTTACGGGCTTGCACTaGGCTCGCTGGGGTGCCTCTGAAAACAGACTGACT +
Preference number: 3 (lower is better)
Translates to: SVKELWRVTGLH*ARWGASENRLT
Trigger: AGTCAGTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCCCGTAACCCTCCAGAGCTCCTTCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR TCA 72 bp GTCCTTTCCACTTACTCTAAGGCCCCCTCTAGTGTTTaGAAAGCTCCAGGCCTCACAGGATACAGGAGGAAG +
Preference number: 3 (lower is better)
Translates to: VLSTYSKAPSSV*KAPGLTGYRRK
Trigger: CTTCCTCCTGTATCCTGTGAGGCCTGGAGCTTTTCAAACACTAGAGGGGGCCTTAGAGTAAGTGGAAAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR CCA 72 bp AAACAGACTGACTGCAGAGGGAGGGAAGCAGCTCCGTaGTGTTCTCAGCTAATGTCGCTAGGTATCAGTTTC +
Preference number: 3 (lower is better)
Translates to: KQTDCRGREAAP*CSQLMSLGISF
Trigger: GAAACTGATACCTAGCGACATTAGCTGAGAACACCACGGAGCTGCTTCCCTCCCTCTGCAGTCAGTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR-3UTR CAA 90 bp TGCAGAGGGAGGGAAGCAGCTCCGTGGTGTTCTCAGCTAATGTCGCTAGGTATCCCACTTCCCTTGCTTTaGAGGATTTTACAAAATATC +
Preference number: 3 (lower is better)
Translates to: CRGREAAPWCSQLMSLGIPLPLL*RILQNI
Trigger: GATATTTTGTAAAATCCTCAAAAGCAAGGGAAGTGG...GATACCTAGCGACATTAGCTGAGAACACCACGGAGCTGCTTCCCTCCCTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR CCA 72 bp CAGAATTCTTACTTTGTTTCAAGATGCTGCATGACCTaGGAGATTGCTAATCTGCCTGCTCAGTGTCACGCA +
Preference number: 3 (lower is better)
Translates to: QNSYFVSRCCMT*EIANLPAQCHA
Trigger: TGCGTGACACTGAGCAGGCAGATTAGCAATCTCCCAGGTCATGCAGCATCTTGAAACAAAGTAAGAATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR TCA 72 bp CCATGTAACCATAATTCATATTTCAAATCCCTGCTATaGTCATCTGTCTCGTCACCCTCAAGTCCAGCAACC +
Preference number: 3 (lower is better)
Translates to: PCNHNSYFKSLL*SSVSSPSSPAT
Trigger: GGTTGCTGGACTTGAGGGTGACGAGACAGATGATCATAGCAGGGATTTGAAATATGAATTATGGTTACATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR GCA 72 bp ATTTTTGGGAATCAGAATTCTTACTTTGTTTCAAGATaGTGCATGACCTGGGAGATTGCTAATCTGCCTGCT +
Preference number: 3 (lower is better)
Translates to: IFGNQNSYFVSR*CMTWEIANLPA
Trigger: AGCAGGCAGATTAGCAATCTCCCAGGTCATGCAGCATCTTGAAACAAAGTAAGAATTCTGATTCCCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp GATGGGGTGGTTTGGAGAGCGCAGTGTGAAGGAGCTCTGGAGGGTTACGGGCTTGCACTGGCCAGCTGCTaGTCACGGGTCTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: DGVVWRAQCEGALEGYGLALASC*SRVSSS
Trigger: GGAGCTAGAGACCCGTGAGCAGCAGCTGGCCAGTGC...AAGCCCGTAACCCTCCAGAGCTCCTTCACACTGCGCTCTCCAAACCACCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp TGCAGAGGGAGGGAAGCAGCTCCGTGGTGTTCTCAGCTAATGTCGCTAGGTATCCTGACGCACCACAGGTaGCCTCTGGCTGGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: CRGREAAPWCSQLMSLGILTHHR*PLAGPA
Trigger: CGCTGGCCCAGCCAGAGGCCACCTGTGGTGCGTCAG...GATACCTAGCGACATTAGCTGAGAACACCACGGAGCTGCTTCCCTCCCTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR CAA 72 bp GAGCGCAGTGTGAAGGAGCTCTGGAGGGTTACGGGCTaGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGA +
Preference number: 4 (lower is better)
Translates to: ERSVKELWRVTG*HWARWGASENR
Trigger: TCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCCCGTAACCCTCCAGAGCTCCTTCACACTGCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GGCTTGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGACTGACTGCAGAGGGATCCAAGGCAAAGCACTaGAGTTTGATCGGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: GLHWARWGASENRLTAEGSKAKH*SLIGVR
Trigger: GCGCACGCCGATCAAACTCCAGTGCTTTGCCTTGGA...TCCCTCTGCAGTCAGTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp TCTGGAGGGTTACGGGCTTGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGACCTGTTATTTGACCCCTaGGCTGCTATCACAGGCACG +
Preference number: 4 (lower is better)
Translates to: SGGLRACTGLAGVPLKTDLLFDP*AAITGT
Trigger: CGTGCCTGTGATAGCAGCCCAGGGGTCAAATAACAG...GTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCCCGTAACCCTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR TCA 90 bp TCTGGAGGGTTACGGGCTTGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGACATCTGCAGTTTAGAGTaGAGAGCCAGGTACACACGC +
Preference number: 4 (lower is better)
Translates to: SGGLRACTGLAGVPLKTDICSLE*RARYTR
Trigger: GCGTGTGTACCTGGCTCTTCACTCTAAACTGCAGAT...GTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCCCGTAACCCTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp AGGGATAAGCTCGCTGTGAGGATGGGGTGGTTTGGAGAGCGCAGTGTGAAGGAGCTCTCTCTGAAGCTCTaGTTCTGCACTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RDKLAVRMGWFGERSVKELSLKL*FCTGQL
Trigger: CAGCTGGCCAGTGCAGAAGCAGAGCTTCAGAGAGAG...CTCCTTCACACTGCGCTCTCCAAACCACCCCATCCTCACAGCGAGCTTATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GGCTTGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGACTGACTGCAGAGGGAGATGCTTTGGACGTTTaGGGAAATGGCGACCTTCGA +
Preference number: 4 (lower is better)
Translates to: GLHWARWGASENRLTAEGDALDV*GNGDLR
Trigger: TCGAAGGTCGCCATTTCCCCAAACGTCCAAAGCATC...TCCCTCTGCAGTCAGTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GGCTTGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGACTGACTGCAGAGGGATTGTTACTCAGCAGCTaGTACCATTTGGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GLHWARWGASENRLTAEGLLLSS*YHLGAC
Trigger: GCAGGCTCCCAAATGGTACCAGCTGCTGAGTAACAA...TCCCTCTGCAGTCAGTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTGACGCACCACAGGTaGCCTCTGGCTGGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: EMRTRLKRKTSPPWKATRLTHHR*PLAGPA
Trigger: CGCTGGCCCAGCCAGAGGCCACCTGTGGTGCGTCAG...CCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp AGGGATAAGCTCGCTGTGAGGATGGGGTGGTTTGGAGAGCGCAGTGTGAAGGAGGCCCAGCTTCCCACTTaGAATCTCTTTGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RDKLAVRMGWFGERSVKEAQLPT*NLFAVL
Trigger: CAGGACTGCAAAGAGATTGCAAGTGGGAAGCTGGGC...CTCCTTCACACTGCGCTCTCCAAACCACCCCATCCTCACAGCGAGCTTATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GGCTTGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGACTGACTGCAGAGGGATTGCAGTCCTGGTACTaGTTCTGTTCTTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GLHWARWGASENRLTAEGLQSWY*FCSCCL
Trigger: AAGGCAGCAAGAACAGAACCAGTACCAGGACTGCAA...TCCCTCTGCAGTCAGTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp TGCAGAGGGAGGGAAGCAGCTCCGTGGTGTTCTCAGCTAATGTCGCTAGGTATCTTGTCCTCTTCCAGCTaGTTCAGCTTCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: CRGREAAPWCSQLMSLGILSSSS*FSFSLS
Trigger: GGAGAGGCTGAAGCTGAAGCAGCTGGAAGAGGACAA...GATACCTAGCGACATTAGCTGAGAACACCACGGAGCTGCTTCCCTCCCTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp AGGGATAAGCTCGCTGTGAGGATGGGGTGGTTTGGAGAGCGCAGTGTGAAGGAGCTCAGGCTGCCTTTCTaGAAGCTTCATGGTACATGG +
Preference number: 4 (lower is better)
Translates to: RDKLAVRMGWFGERSVKELRLPF*KLHGTW
Trigger: CCATGTACCATGAAGCTTCCAGAAAGGCAGCCTGAG...CTCCTTCACACTGCGCTCTCCAAACCACCCCATCCTCACAGCGAGCTTATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp TGCAGAGGGAGGGAAGCAGCTCCGTGGTGTTCTCAGCTAATGTCGCTAGGTATCCTGCTTGGCTCGGTTTaGAGGGTCAAGGGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: CRGREAAPWCSQLMSLGILLGSV*RVKGKS
Trigger: GCTTTTACCCTTGACCCTCCAAACCGAGCCAAGCAG...GATACCTAGCGACATTAGCTGAGAACACCACGGAGCTGCTTCCCTCCCTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp AGCCCAAAGATGGCTTTCTGGAAGGCAAAGCACACACACATTTTAGAAGTCCTTTGGAGGCGTCTGGTTTaGAGGTGGGGGCGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPKMAFWKAKHTHILEVLWRRLV*RWGRGR
Trigger: CCTGCCCCGCCCCCACCTCCAAACCAGACGCCTCCA...AAGGACTTCTAAAATGTGTGTGTGCTTTGCCTTCCAGAAAGCCATCTTTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGTTGGTTGGAGGCGTCTaGTTTGGAGGTGGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: EMRTRLKRKTSPPWKATRLVGGV*FGGGGG
Trigger: CCCGCCCCCACCTCCAAACCAGACGCCTCCAACCAA...CCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp AGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATATCAGGGACCACAGGTGGCCTCTaGCTGGGCCAGCGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: RLKRKTSPPWKATRLISGTTGGL*LGQRSR
Trigger: CCTGCTTCGCTGGCCCAGCCAGAGGCCACCTGTGGT...CCCTGATATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp TGCAGAGGGAGGGAAGCAGCTCCGTGGTGTTCTCAGCTAATGTCGCTAGGTATCTCTCTGGGTTCCATCTaGATCTCAGAAGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: CRGREAAPWCSQLMSLGISLGSI*ISEGQG
Trigger: TCCCTGCCCTTCTGAGATCCAGATGGAACCCAGAGA...GATACCTAGCGACATTAGCTGAGAACACCACGGAGCTGCTTCCCTCCCTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GGCTTGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGACTGACTGCAGAGGGACTGCAGCCGGATTTCTaGTTTGTTGTTCTGTTGATC +
Preference number: 4 (lower is better)
Translates to: GLHWARWGASENRLTAEGLQPDF*FVVLLI
Trigger: GATCAACAGAACAACAAACCAGAAATCCGGCTGCAG...TCCCTCTGCAGTCAGTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR TCA 90 bp AGGGATAAGCTCGCTGTGAGGATGGGGTGGTTTGGAGAGCGCAGTGTGAAGGAGGTGATTTTGGCCCAGTaGGTGTCTTCTCCTTTATGG +
Preference number: 4 (lower is better)
Translates to: RDKLAVRMGWFGERSVKEVILAQ*VSSPLW
Trigger: CCATAAAGGAGAAGACACTCACTGGGCCAAAATCAC...CTCCTTCACACTGCGCTCTCCAAACCACCCCATCCTCACAGCGAGCTTATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp GATGGGGTGGTTTGGAGAGCGCAGTGTGAAGGAGCTCTGGAGGGTTACGGGCTTAAGGTATTTCTGTACTaGCAAGTGACTGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: DGVVWRAQCEGALEGYGLKVFLY*QVTGLH
Trigger: GTGGAGACCAGTCACTTGGCAGTACAGAAATACCTT...AAGCCCGTAACCCTCCAGAGCTCCTTCACACTGCGCTCTCCAAACCACCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp TCTGGAGGGTTACGGGCTTGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGACAAAACCTCTCTGATCTaGCGGTCGAGTTCACTTATT +
Preference number: 4 (lower is better)
Translates to: SGGLRACTGLAGVPLKTDKTSLI*RSSSLI
Trigger: AATAAGTGAACTCGACCGGCAGATCAGAGAGGTTTT...GTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCCCGTAACCCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp TCTGGAGGGTTACGGGCTTGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGACATTAACTGTTCCAACTaGGTGGCAAATGCAATCGTC +
Preference number: 4 (lower is better)
Translates to: SGGLRACTGLAGVPLKTDINCSN*VANAIV
Trigger: GACGATTGCATTTGCCACCCAGTTGGAACAGTTAAT...GTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCCCGTAACCCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp AGCCCAAAGATGGCTTTCTGGAAGGCAAAGCACACACACATTTTAGAAGTCCTTACCACAGGTGGCCTCTaGCTGGGCCAGCGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPKMAFWKAKHTHILEVLTTGGL*LGQRSR
Trigger: CCTGCTTCGCTGGCCCAGCCAGAGGCCACCTGTGGT...AAGGACTTCTAAAATGTGTGTGTGCTTTGCCTTCCAGAAAGCCATCTTTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp AGGGATAAGCTCGCTGTGAGGATGGGGTGGTTTGGAGAGCGCAGTGTGAAGGAGAGTCATAATAGGAGCTaGACTGCCGAAGAATGGGTA +
Preference number: 4 (lower is better)
Translates to: RDKLAVRMGWFGERSVKESHNRS*TAEEWV
Trigger: TACCCATTCTTCGGCAGTGCAGCTCCTATTATGACT...CTCCTTCACACTGCGCTCTCCAAACCACCCCATCCTCACAGCGAGCTTATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR TCA 90 bp AGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATATCAGGGGGGTCTCTAGCTCCGTaGGGGCCTTCTGAAGTTTGC +
Preference number: 4 (lower is better)
Translates to: RLKRKTSPPWKATRLISGGSLAP*GPSEVC
Trigger: GCAAACTTCAGAAGGCCCTCACGGAGCTAGAGACCC...CCCTGATATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR TCA 90 bp TCAAAGGGAGCAGGACACAGCGTGTTTAAAGTGCAACATATTCTCTCTTGGCTCGAGTCCTGCAGCTCTTaGAGGTTCCGCTCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: SKGAGHSVFKVQHILSWLESCSS*RFRSRS
Trigger: AGAACGGGAGCGGAACCTTCAAGAGCTGCAGGACTC...GAGCCAAGAGAGAATATGTTGCACTTTAAACACGCTGTGTCCTGCTCCCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR TCA 90 bp TCTGGAGGGTTACGGGCTTGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGACTGTTCTGTTGATCCTTaGACTGCTGAAACTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SGGLRACTGLAGVPLKTDCSVDP*TAETLF
Trigger: AAAAAGAGTTTCAGCAGTTCAAGGATCAACAGAACA...GTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCCCGTAACCCTCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp TGCAGAGGGAGGGAAGCAGCTCCGTGGTGTTCTCAGCTAATGTCGCTAGGTATCCAACTGGGTGGCAAATaGAATCGTCACCGACAAAAT +
Preference number: 4 (lower is better)
Translates to: CRGREAAPWCSQLMSLGIQLGGK*NRHRQN
Trigger: ATTTTGTCGGTGACGATTGCATTTGCCACCCAGTTG...GATACCTAGCGACATTAGCTGAGAACACCACGGAGCTGCTTCCCTCCCTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp TGCAGAGGGAGGGAAGCAGCTCCGTGGTGTTCTCAGCTAATGTCGCTAGGTATCTCTACTGTGACCGGATaGTGGTTAATCTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: CRGREAAPWCSQLMSLGISTVTG*WLISVL
Trigger: CAGTACAGAGATTAACCAGCATCCGGTCACAGTAGA...GATACCTAGCGACATTAGCTGAGAACACCACGGAGCTGCTTCCCTCCCTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp GAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCATGTCGATGCCTTCTCTCTaGAGAGCCACGGACACGCCC +
Preference number: 4 (lower is better)
Translates to: EPTLGQDLLKQNTSVPFMSMPSL*RATDTP
Trigger: GGGCGTGTCCGTGGCTCTGCAGAGAGAAGGCATCGA...CATGAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp GATGGGGTGGTTTGGAGAGCGCAGTGTGAAGGAGCTCTGGAGGGTTACGGGCTTTCAAATATGTCTTCCTaGATCTCTTTCCACATCTCC +
Preference number: 4 (lower is better)
Translates to: DGVVWRAQCEGALEGYGLSNMSS*ISFHIS
Trigger: GGAGATGTGGAAAGAGATGCAGGAAGACATATTTGA...AAGCCCGTAACCCTCCAGAGCTCCTTCACACTGCGCTCTCCAAACCACCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp TCAAAGGGAGCAGGACACAGCGTGTTTAAAGTGCAACATATTCTCTCTTGGCTCCTGAAGCTCTGCTTCTaGACTGGCCAGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SKGAGHSVFKVQHILSWLLKLCF*TGQLLL
Trigger: GAGCAGCAGCTGGCCAGTGCAGAAGCAGAGCTTCAG...GAGCCAAGAGAGAATATGTTGCACTTTAAACACGCTGTGTCCTGCTCCCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGTCCAAGGCAAAGCACTaGAGTTTGATCGGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: EMRTRLKRKTSPPWKATRSKAKH*SLIGVR
Trigger: GCGCACGCCGATCAAACTCCAGTGCTTTGCCTTGGA...CCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp GGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAACAATTGGTTGGAGGCGTCTaGTTTGGAGGTGGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GISFHSPFLSCIAITEKQLVGGV*FGGGGG
Trigger: CCCGCCCCCACCTCCAAACCAGACGCCTCCAACCAA...TTGTTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
3UTR CAA 72 bp TCTGTCTCGTCACCCTCAAGTCCAGCAACCCCTCTGTaGTTTACTGCGGGGTTGCTCTTAGAAGACAAAGAC +
Preference number: 4 (lower is better)
Translates to: SVSSPSSPATPL*FTAGLLLEDKD
Trigger: GTCTTTGTCTTCTAAGAGCAACCCCGCAGTAAACAACAGAGGGGTTGCTGGACTTGAGGGTGACGAGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR TCA 90 bp AGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATATCAGGGGAAGCAGAAGTGGTGTaGCGCCGCTGGAACAGCAAT +
Preference number: 4 (lower is better)
Translates to: RLKRKTSPPWKATRLISGEAEVV*RRWNSN
Trigger: ATTGCTGTTCCAGCGGCGTCACACCACTTCTGCTTC...CCCTGATATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR TCA 90 bp AGCCCAAAGATGGCTTTCTGGAAGGCAAAGCACACACACATTTTAGAAGTCCTTGGGTCTCTAGCTCCGTaGGGGCCTTCTGAAGTTTGC +
Preference number: 4 (lower is better)
Translates to: SPKMAFWKAKHTHILEVLGSLAP*GPSEVC
Trigger: GCAAACTTCAGAAGGCCCTCACGGAGCTAGAGACCC...AAGGACTTCTAAAATGTGTGTGTGCTTTGCCTTCCAGAAAGCCATCTTTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR TCA 90 bp AGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATAGAGTCCTGCAGCTCTTaGAGGTTCCGCTCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: RTRLKRKTSPPWKATRLIESCSS*RFRSRS
Trigger: AGAACGGGAGCGGAACCTTCAAGAGCTGCAGGACTC...TATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp GATGGGGTGGTTTGGAGAGCGCAGTGTGAAGGAGCTCTGGAGGGTTACGGGCTTCAGTTTAGACTTGGTTaGAGATTCCAACTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: DGVVWRAQCEGALEGYGLQFRLG*RFQLSF
Trigger: GAAAGAAAGTTGGAATCTGCAACCAAGTCTAAACTG...AAGCCCGTAACCCTCCAGAGCTCCTTCACACTGCGCTCTCCAAACCACCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGAGTACAGTGCTCCGCTaGTCCAATCTGATGGTAGCC +
Preference number: 4 (lower is better)
Translates to: EMRTRLKRKTSPPWKATRSTVLR*SNLMVA
Trigger: GGCTACCATCAGATTGGACCAGCGGAGCACTGTACT...CCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp AGCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAATGGAGGCGTCTGGTTTaGAGGTGGGGGCGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SNSFSKTGNETRDEDKIKWRRLV*RWGRGR
Trigger: CCTGCCCCGCCCCCACCTCCAAACCAGACGCCTCCA...TTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR TCA 90 bp TCAAAGGGAGCAGGACACAGCGTGTTTAAAGTGCAACATATTCTCTCTTGGCTCTTCTGTACTGCCAAGTaGCTGGTCTCCACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SKGAGHSVFKVQHILSWLFCTAK*LVSTAE
Trigger: CTCTGCTGTGGAGACCAGTCACTTGGCAGTACAGAA...GAGCCAAGAGAGAATATGTTGCACTTTAAACACGCTGTGTCCTGCTCCCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR TCA 90 bp AGCCCAAAGATGGCTTTCTGGAAGGCAAAGCACACACACATTTTAGAAGTCCTTAGGGGACTCCCTTGGTaGTTTTGGCCCAGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SPKMAFWKAKHTHILEVLRGLPW*FWPSEC
Trigger: ACACTCACTGGGCCAAAATCACCAAGGGAGTCCCCT...AAGGACTTCTAAAATGTGTGTGTGCTTTGCCTTCCAGAAAGCCATCTTTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR TCA 90 bp TCAAAGGGAGCAGGACACAGCGTGTTTAAAGTGCAACATATTCTCTCTTGGCTCTGGTCAAAACCTCTCTaGTCTGCCGGTCGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: SKGAGHSVFKVQHILSWLWSKPL*SAGRVH
Trigger: GTGAACTCGACCGGCAGATCAGAGAGGTTTTGACCA...GAGCCAAGAGAGAATATGTTGCACTTTAAACACGCTGTGTCCTGCTCCCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp AGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATATCAGGGCAGGTACAGAACCGATaGCCTTCACAGTGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RLKRKTSPPWKATRLISGQVQNR*PSQWAL
Trigger: CAAAGCCCACTGTGAAGGGCATCGGTTCTGTACCTG...CCCTGATATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp GCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGGCACTGGCCAGCTGCTaGTCACGGGTCTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: ATHSVRLEMRLEMRTRLKALASC*SRVSSS
Trigger: GGAGCTAGAGACCCGTGAGCAGCAGCTGGCCAGTGC...CTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp AGAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGGACGTTTGGGGAAATaGCGACCTTCGAGGATGGAT +
Preference number: 4 (lower is better)
Translates to: RDEDKIKEKDFATLESHTGRLGK*RPSRMD
Trigger: ATCCATCCTCGAAGGTCGCCATTTCCCCAAACGTCC...CGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp AGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATATCAGGGCTGCTTGGCTCGGTTTaGAGGGTCAAGGGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: RLKRKTSPPWKATRLISGLLGSV*RVKGKS
Trigger: GCTTTTACCCTTGACCCTCCAAACCGAGCCAAGCAG...CCCTGATATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp AGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATATCAGGGACTGAGAAGCAGAAGTaGTGTGACGCCGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: RLKRKTSPPWKATRLISGTEKQK*CDAAGT
Trigger: TGTTCCAGCGGCGTCACACCACTTCTGCTTCTCAGT...CCCTGATATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp AGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATATCAGGGCTCTCCAGCTCCACTTaGTACACACAGTCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RLKRKTSPPWKATRLISGLSSST*YTQSSL
Trigger: CAGAGACGACTGTGTGTACCAAGTGGAGCTGGAGAG...CCCTGATATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
3UTR CAA 72 bp GATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTaGGAAAGCCACACGGCTAATATCAGGGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: DEDKIKEKDFAT*ESHTANIRGLS
Trigger: ACTCAGGCCCCTGATATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR TCA 90 bp CTAGGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAAGAAGCAGAAGTGGTGTaGCGCCGCTGGAACAGCAAT +
Preference number: 4 (lower is better)
Translates to: LGISFHSPFLSCIAITEKEAEVV*RRWNSN
Trigger: ATTGCTGTTCCAGCGGCGTCACACCACTTCTGCTTC...TTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR TCA 90 bp GAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGTCCGTGAGGGCCTTCTaGAGTTTGCCTTCTAGAATA +
Preference number: 4 (lower is better)
Translates to: EMRTRLKRKTSPPWKATRSVRAF*SLPSRI
Trigger: TATTCTAGAAGGCAAACTTCAGAAGGCCCTCACGGA...CCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp CTAGGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAATCCTTGGCAGAAGTCTaGGGGTCCAAGGCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: LGISFHSPFLSCIAITEKSLAEV*GSKAKH
Trigger: GTGCTTTGCCTTGGACCCGCAGACTTCTGCCAAGGA...TTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp AGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATATCAGGGGAATCTCCACACTGCTaGGTATACGAACAGATGCCC +
Preference number: 4 (lower is better)
Translates to: RLKRKTSPPWKATRLISGESPHC*VYEQMP
Trigger: GGGCATCTGTTCGTATACGCAGCAGTGTGGAGATTC...CCCTGATATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp GCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGTCGATGCCTTCTCTCTaGAGAGCCACGGACACGCCC +
Preference number: 4 (lower is better)
Translates to: ATHSVRLEMRLEMRTRLKSMPSL*RATDTP
Trigger: GGGCGTGTCCGTGGCTCTGCAGAGAGAAGGCATCGA...CTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp AGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATATCAGGGGTCTGTCGCCAGCACTaGTCACCATTAGCACCTAAA +
Preference number: 4 (lower is better)
Translates to: RLKRKTSPPWKATRLISGVCRQH*SPLAPK
Trigger: TTTAGGTGCTAATGGTGAGCAGTGCTGGCGACAGAC...CCCTGATATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp AGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATATTGTCCTCTTCCAGCTaGTTCAGCTTCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RTRLKRKTSPPWKATRLILSSSS*FSFSLS
Trigger: GGAGAGGCTGAAGCTGAAGCAGCTGGAAGAGGACAA...TATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp GAAGAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCGGACGTTTGGGGAAATaGCGACCTTCGAGGATGGAT +
Preference number: 4 (lower is better)
Translates to: EEPTLGQDLLKQNTSVPFGRLGK*RPSRMD
Trigger: ATCCATCCTCGAAGGTCGCCATTTCCCCAAACGTCC...GAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp AGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATATCTGGCTGGTCAGTATaGTCGACAGGATCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: RTRLKRKTSPPWKATRLISGWSV*STGSVA
Trigger: GGCTACTGATCCTGTCGACCATACTGACCAGCCAGA...TATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp AGAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGTTGTTACTCAGCAGCTaGTACCATTTGGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: RDEDKIKEKDFATLESHTLLLSS*YHLGAC
Trigger: GCAGGCTCCCAAATGGTACCAGCTGCTGAGTAACAA...CGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp TCAAAGGGAGCAGGACACAGCGTGTTTAAAGTGCAACATATTCTCTCTTGGCTCACTGTTCCAACTGGGTaGCAAATGCAATCGTCACCG +
Preference number: 4 (lower is better)
Translates to: SKGAGHSVFKVQHILSWLTVPTG*QMQSSP
Trigger: CGGTGACGATTGCATTTGCCACCCAGTTGGAACAGT...GAGCCAAGAGAGAATATGTTGCACTTTAAACACGCTGTGTCCTGCTCCCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp AGAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGACTGTTCCAACTGGGTaGCAAATGCAATCGTCACCG +
Preference number: 4 (lower is better)
Translates to: RDEDKIKEKDFATLESHTTVPTG*QMQSSP
Trigger: CGGTGACGATTGCATTTGCCACCCAGTTGGAACAGT...CGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp GAAGAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCGAGCTAGCTTCTGCTTaGCTCGGTTTGGAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: EEPTLGQDLLKQNTSVPFELASA*LGLEGQ
Trigger: TTGACCCTCCAAACCGAGCCAAGCAGAAGCTAGCTC...GAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp TCAAAGGGAGCAGGACACAGCGTGTTTAAAGTGCAACATATTCTCTCTTGGCTCCTGTTGCATCATCCTTaGTTGGAGGCGTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SKGAGHSVFKVQHILSWLLLHHP*LEASGL
Trigger: CAAACCAGACGCCTCCAACCAAGGATGATGCAACAG...GAGCCAAGAGAGAATATGTTGCACTTTAAACACGCTGTGTCCTGCTCCCTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp AGCCCAAAGATGGCTTTCTGGAAGGCAAAGCACACACACATTTTAGAAGTCCTTACTGAGAAGCAGAAGTaGTGTGACGCCGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: SPKMAFWKAKHTHILEVLTEKQK*CDAAGT
Trigger: TGTTCCAGCGGCGTCACACCACTTCTGCTTCTCAGT...AAGGACTTCTAAAATGTGTGTGTGCTTTGCCTTCCAGAAAGCCATCTTTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR TCA 90 bp AGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATAATCTGCAGTTTAGAGTaGAGAGCCAGGTACACACGC +
Preference number: 4 (lower is better)
Translates to: RTRLKRKTSPPWKATRLIICSLE*RARYTR
Trigger: GCGTGTGTACCTGGCTCTTCACTCTAAACTGCAGAT...TATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR TCA 90 bp GAGACTAGAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCTCATTAAGCTGCTGCTaGAGCCGCTGTTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: ETRDEDKIKEKDFATLESSLSCC*SRCLSS
Trigger: AGAGGACAAACAGCGGCTTCAGCAGCAGCTTAATGA...GCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTCTAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR TCA 90 bp GAAGAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCGAGGAGGTTTATTTCTaGCTGCAGCCGGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: EEPTLGQDLLKQNTSVPFEEVYF*LQPDFW
Trigger: CCAGAAATCCGGCTGCAGTCAGAAATAAACCTCCTC...GAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR TCA 90 bp CTAGGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAATTAAGGCGGGCCATTTaGCTTTCTTGCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LGISFHSPFLSCIAITEKLRRAI*LSCSLC
Trigger: GCAGAGGGAGCAAGAAAGTCAAATGGCCCGCCTTAA...TTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp GAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCATGCTCCCCATCAAACTTTaGTTCCACCACGAGCAGATG +
Preference number: 4 (lower is better)
Translates to: EPTLGQDLLKQNTSVPFMLPIKL*FHHEQM
Trigger: CATCTGCTCGTGGTGGAAGCAAAGTTTGATGGGGAG...CATGAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp GAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCATGGGATCAGTAGCCAGCTaGTCCCCATCAAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: EPTLGQDLLKQNTSVPFMGSVAS*SPSNFA
Trigger: AGCAAAGTTTGATGGGGAGCAGCTGGCTACTGATCC...CATGAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp GAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGTCTACTGTGACCGGATaGTGGTTAATCTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: EMRTRLKRKTSPPWKATRSTVTG*WLISVL
Trigger: CAGTACAGAGATTAACCAGCATCCGGTCACAGTAGA...CCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp TCAAAGGGAGCAGGACACAGCGTGTTTAAAGTGCAACATATTCTCTCTTGGCTCGGATCCTTGTCATACTaGAGGCTCTCCACTTCACTT +
Preference number: 4 (lower is better)
Translates to: SKGAGHSVFKVQHILSWLGSLSY*RLSTSL
Trigger: AAGTGAAGTGGAGAGCCTGCAGTATGACAAGGATCC...GAGCCAAGAGAGAATATGTTGCACTTTAAACACGCTGTGTCCTGCTCCCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp GAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCATGGTCTGTCGCCAGCACTaGTCACCATTAGCACCTAAA +
Preference number: 4 (lower is better)
Translates to: EPTLGQDLLKQNTSVPFMVCRQH*SPLAPK
Trigger: TTTAGGTGCTAATGGTGAGCAGTGCTGGCGACAGAC...CATGAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAACAACACGAGCAGATGCTTTaGACGTTTGGGGAAATGGCG +
Preference number: 4 (lower is better)
Translates to: GISFHSPFLSCIAITEKQHEQML*TFGEMA
Trigger: CGCCATTTCCCCAAACGTCCAAAGCATCTGCTCGTG...TTGTTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp CTAGGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAATCTGGCTGGTCAGTATaGTCGACAGGATCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: LGISFHSPFLSCIAITEKSGWSV*STGSVA
Trigger: GGCTACTGATCCTGTCGACCATACTGACCAGCCAGA...TTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp TCAAAGGGAGCAGGACACAGCGTGTTTAAAGTGCAACATATTCTCTCTTGGCTCCTCAGTAGCAAATTCTaGCTGGTCAGTATGGTCGAC +
Preference number: 4 (lower is better)
Translates to: SKGAGHSVFKVQHILSWLLSSKF*LVSMVD
Trigger: GTCGACCATACTGACCAGCCAGAATTTGCTACTGAG...GAGCCAAGAGAGAATATGTTGCACTTTAAACACGCTGTGTCCTGCTCCCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GAGACTAGAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCTCAGGCTGCCTTTCTaGAAGCTTCATGGTACATGG +
Preference number: 4 (lower is better)
Translates to: ETRDEDKIKEKDFATLESLRLPF*KLHGTW
Trigger: CCATGTACCATGAAGCTTCCAGAAAGGCAGCCTGAG...GCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTCTAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp GGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAACAAGTACTGCCAAGTGACTaGTCTCCACAGCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: GISFHSPFLSCIAITEKQVLPSD*SPQQRW
Trigger: CCATCTCTGCTGTGGAGACCAGTCACTTGGCAGTAC...TTGTTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GAGACTAGAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCACTGTGACCGGATGCTaGTTAATCTCTGTACTGCCC +
Preference number: 4 (lower is better)
Translates to: ETRDEDKIKEKDFATLESTVTGC*LISVLP
Trigger: GGGCAGTACAGAGATTAACCAGCATCCGGTCACAGT...GCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTCTAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp TGCAGAGGGAGGGAAGCAGCTCCGTGGTGTTCTCAGCTAATGTCGCTAGGTATCGCCTCATGTCCATTCTaGGTCTTTAATTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: CRGREAAPWCSQLMSLGIASCPF*VFNSIK
Trigger: TTTAATTGAATTAAAGACCCAGAATGGACATGAGGC...GATACCTAGCGACATTAGCTGAGAACACCACGGAGCTGCTTCCCTCCCTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp CTAGGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAATGCATCATCCTTGGTTaGAGGCGTCTGGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LGISFHSPFLSCIAITEKCIILG*RRLVWR
Trigger: CCTCCAAACCAGACGCCTCCAACCAAGGATGATGCA...TTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp AGAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGACTCTAAGGTCTCTCTaGGTTCCATCTGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: RDEDKIKEKDFATLESHTTLRSL*VPSGSQ
Trigger: CTGAGATCCAGATGGAACCCAGAGAGACCTTAGAGT...CGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR TCA 90 bp GCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGGGGACTCCCTTGGTaGTTTTGGCCCAGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: ATHSVRLEMRLEMRTRLKRGLPW*FWPSEC
Trigger: ACACTCACTGGGCCAAAATCACCAAGGGAGTCCCCT...CTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR TCA 90 bp GGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAACAATCATTAAGCTGCTGCTaGAGCCGCTGTTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GISFHSPFLSCIAITEKQSLSCC*SRCLSS
Trigger: AGAGGACAAACAGCGGCTTCAGCAGCAGCTTAATGA...TTGTTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp CTAGGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAATCCACCACGAGCAGATaGTTTGGACGTTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LGISFHSPFLSCIAITEKSTTSR*FGRLGK
Trigger: TTTCCCCAAACGTCCAAAGCATCTGCTCGTGGTGGA...TTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp GGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAACAAGAATCTCCACACTGCTaGGTATACGAACAGATGCCC +
Preference number: 4 (lower is better)
Translates to: GISFHSPFLSCIAITEKQESPHC*VYEQMP
Trigger: GGGCATCTGTTCGTATACGCAGCAGTGTGGAGATTC...TTGTTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp GAGACTAGAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCGGATCCTTGTCATACTaGAGGCTCTCCACTTCACTT +
Preference number: 4 (lower is better)
Translates to: ETRDEDKIKEKDFATLESGSLSY*RLSTSL
Trigger: AAGTGAAGTGGAGAGCCTGCAGTATGACAAGGATCC...GCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTCTAGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp AATTTCAAAGCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACACTGAAGCTCTGCTTCTaGACTGGCCAGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: NFKATHSVRLEMRLEMRTLKLCF*TGQLLL
Trigger: GAGCAGCAGCTGGCCAGTGCAGAAGCAGAGCTTCAG...TGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGCTTTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp GAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCATGTCCAGCAGTTCCTGCTaGTCAGTTCTCACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: EPTLGQDLLKQNTSVPFMSSSSC*SVLTVS
Trigger: AGAAACAGTGAGAACTGAGCAGCAGGAACTGCTGGA...CATGAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp AGCCCAAAGATGGCTTTCTGGAAGGCAAAGCACACACACATTTTAGAAGTCCTTGTAGCAAATTCTGGCTaGTCAGTATGGTCGACAGGA +
Preference number: 4 (lower is better)
Translates to: SPKMAFWKAKHTHILEVLVANSG*SVWSTG
Trigger: TCCTGTCGACCATACTGACCAGCCAGAATTTGCTAC...AAGGACTTCTAAAATGTGTGTGTGCTTTGCCTTCCAGAAAGCCATCTTTGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GAAGAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCGCAGCTGGTACCATTTaGGAGCCTGCTTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: EEPTLGQDLLKQNTSVPFAAGTI*EPALFL
Trigger: AAGAAACAAAGCAGGCTCCCAAATGGTACCAGCTGC...GAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp AGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATAGCAGCTGGTACCATTTaGGAGCCTGCTTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RTRLKRKTSPPWKATRLIAAGTI*EPALFL
Trigger: AAGAAACAAAGCAGGCTCCCAAATGGTACCAGCTGC...TATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp GAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGATTAACTGTTCCAACTaGGTGGCAAATGCAATCGTC +
Preference number: 4 (lower is better)
Translates to: EMRTRLKRKTSPPWKATRINCSN*VANAIV
Trigger: GACGATTGCATTTGCCACCCAGTTGGAACAGTTAAT...CCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR TCA 90 bp CTAGGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAATCCGTGAGGGCCTTCTaGAGTTTGCCTTCTAGAATA +
Preference number: 4 (lower is better)
Translates to: LGISFHSPFLSCIAITEKSVRAF*SLPSRI
Trigger: TATTCTAGAAGGCAAACTTCAGAAGGCCCTCACGGA...TTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR TCA 90 bp GCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGTTAAGGCGGGCCATTTaGCTTTCTTGCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ATHSVRLEMRLEMRTRLKLRRAI*LSCSLC
Trigger: GCAGAGGGAGCAAGAAAGTCAAATGGCCCGCCTTAA...CTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp AATTTCAAAGCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACATCCTTGGCAGAAGTCTaGGGGTCCAAGGCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: NFKATHSVRLEMRLEMRTSLAEV*GSKAKH
Trigger: GTGCTTTGCCTTGGACCCGCAGACTTCTGCCAAGGA...TGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGCTTTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp AGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATATCAGGGCTCATTTTATCCTTGTaGCATAACTCCACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RLKRKTSPPWKATRLISGLILSL*HNSTSR
Trigger: TCTGCTGGTGGAGTTATGGCACAAGGATAAAATGAG...CCCTGATATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp ACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGACTCTCTCTGAAGCTCTaGTTCTGCACTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: THSVRLEMRLEMRTRLKRLSLKL*FCTGQL
Trigger: CAGCTGGCCAGTGCAGAAGCAGAGCTTCAGAGAGAG...TCTCTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp AGCCCAAAGATGGCTTTCTGGAAGGCAAAGCACACACACATTTTAGAAGTCCTTCTTTCTTGCTCCCTCTaGTTTAGTCTGGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SPKMAFWKAKHTHILEVLLSCSL*FSLASS
Trigger: AGAACTTGCCAGACTAAAGCAGAGGGAGCAAGAAAG...AAGGACTTCTAAAATGTGTGTGTGCTTTGCCTTCCAGAAAGCCATCTTTGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp AGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATACTTTCTTGCTCCCTCTaGTTTAGTCTGGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RTRLKRKTSPPWKATRLILSCSL*FSLASS
Trigger: AGAACTTGCCAGACTAAAGCAGAGGGAGCAAGAAAG...TATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp ATTGTGGTCAGACCAAGCTATTTTCTCATGGTCTTCAAGTGGAGTCCAATGAAAACTGTGACCGGATGCTaGTTAATCTCTGTACTGCCC +
Preference number: 4 (lower is better)
Translates to: IVVRPSYFLMVFKWSPMKTVTGC*LISVLP
Trigger: GGGCAGTACAGAGATTAACCAGCATCCGGTCACAGT...TTTCATTGGACTCCACTTGAAGACCATGAGAAAATAGCTTGGTCTGACCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp CTAGGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAAACTCTAAGGTCTCTCTaGGTTCCATCTGGATCTCAG +
Preference number: 4 (lower is better)
Translates to: LGISFHSPFLSCIAITEKTLRSL*VPSGSQ
Trigger: CTGAGATCCAGATGGAACCCAGAGAGACCTTAGAGT...TTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp AGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATACCCTCTGCTTTAGTCTaGCAAGTTCTTTCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: RTRLKRKTSPPWKATRLIPSALV*QVLSKL
Trigger: GAGCTTTGAAAGAACTTGCCAGACTAAAGCAGAGGG...TATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR TCA 90 bp ACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGATTCTGTACTGCCAAGTaGCTGGTCTCCACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: THSVRLEMRLEMRTRLKRFCTAK*LVSTAE
Trigger: CTCTGCTGTGGAGACCAGTCACTTGGCAGTACAGAA...TCTCTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR TCA 90 bp GCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGGAGGAGGTTTATTTCTaGCTGCAGCCGGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: ATHSVRLEMRLEMRTRLKEEVYF*LQPDFW
Trigger: CCAGAAATCCGGCTGCAGTCAGAAATAAACCTCCTC...CTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR TCA 90 bp CTAGGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAACAACCTTCTCCAAGGTaGGGAGGTTTATTTCTGACT +
Preference number: 4 (lower is better)
Translates to: LGISFHSPFLSCIAITEKQPSPR*GGLFLT
Trigger: AGTCAGAAATAAACCTCCTCACCTTGGAGAAGGTTG...TTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp GCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGTCCACCACGAGCAGATaGTTTGGACGTTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: ATHSVRLEMRLEMRTRLKSTTSR*FGRLGK
Trigger: TTTCCCCAAACGTCCAAAGCATCTGCTCGTGGTGGA...CTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp AGTTCTCCTGGGACAAGTTGTGAAAGGCTGTTTTTAAAGTCAAACAACAGATTTCAGGTACAGAACCGATaGCCTTCACAGTGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SSPGTSCERLFLKSNNRFQVQNR*PSQWAL
Trigger: CAAAGCCCACTGTGAAGGGCATCGGTTCTGTACCTG...AAATCTGTTGTTTGACTTTAAAAACAGCCTTTCACAACTTGTCCCAGGAGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp AGCCCAAAGATGGCTTTCTGGAAGGCAAAGCACACACACATTTTAGAAGTCCTTCTCATTTTATCCTTGTaGCATAACTCCACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SPKMAFWKAKHTHILEVLLILSL*HNSTSR
Trigger: TCTGCTGGTGGAGTTATGGCACAAGGATAAAATGAG...AAGGACTTCTAAAATGTGTGTGTGCTTTGCCTTCCAGAAAGCCATCTTTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp AGCCCAAAGATGGCTTTCTGGAAGGCAAAGCACACACACATTTTAGAAGTCCTTAGGTTTATTTCTGACTaGAGCCGGATTTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SPKMAFWKAKHTHILEVLRFISD*SRISGL
Trigger: CAAACCAGAAATCCGGCTGCAGTCAGAAATAAACCT...AAGGACTTCTAAAATGTGTGTGTGCTTTGCCTTCCAGAAAGCCATCTTTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp GAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCAGTTTAGACTTGGTTaGAGATTCCAACTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: EMRTRLKRKTSPPWKATRQFRLG*RFQLSF
Trigger: GAAAGAAAGTTGGAATCTGCAACCAAGTCTAAACTG...CCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp ATTGTGGTCAGACCAAGCTATTTTCTCATGGTCTTCAAGTGGAGTCCAATGAAATGGTTCTGTTCTTGCTaGCTTAACCTGTTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: IVVRPSYFLMVFKWSPMKWFCSC*LNLFSS
Trigger: CGAGCTGAACAGGTTAAGGCAGCAAGAACAGAACCA...TTTCATTGGACTCCACTTGAAGACCATGAGAAAATAGCTTGGTCTGACCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp ACACAGCGTCTCTGCCCGAGACTGCTTTATTTTCAAAGTTGTCATCTGCAAATATACTGGTTCTGTTCTTaGTGCCTTAACCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: TQRLCPRLLYFQSCHLQIYWFCS*CLNLFS
Trigger: GCTGAACAGGTTAAGGCAGCAAGAACAGAACCAGTA...TATTTGCAGATGACAACTTTGAAAATAAAGCAGTCTCGGGCAGAGACGCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp AGTTCTCCTGGGACAAGTTGTGAAAGGCTGTTTTTAAAGTCAAACAACAGATTTAGTACAGTGCTCCGCTaGTCCAATCTGATGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SSPGTSCERLFLKSNNRFSTVLR*SNLMVA
Trigger: GGCTACCATCAGATTGGACCAGCGGAGCACTGTACT...AAATCTGTTGTTTGACTTTAAAAACAGCCTTTCACAACTTGTCCCAGGAGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp ACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGAGTACTGCCAAGTGACTaGTCTCCACAGCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: THSVRLEMRLEMRTRLKRVLPSD*SPQQRW
Trigger: CCATCTCTGCTGTGGAGACCAGTCACTTGGCAGTAC...TCTCTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp ACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGAGAGCTAGCTTCTGCTTaGCTCGGTTTGGAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: THSVRLEMRLEMRTRLKRELASA*LGLEGQ
Trigger: TTGACCCTCCAAACCGAGCCAAGCAGAAGCTAGCTC...TCTCTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp AGAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGTGTCTTCTCCTTTATaGGGGTTAAAACTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RDEDKIKEKDFATLESHTVSSPL*GLKLSS
Trigger: AGAAGAGAGTTTTAACCCCCATAAAGGAGAAGACAC...CGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp AATTTCAAAGCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACATGCATCATCCTTGGTTaGAGGCGTCTGGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: NFKATHSVRLEMRLEMRTCIILG*RRLVWR
Trigger: CCTCCAAACCAGACGCCTCCAACCAAGGATGATGCA...TGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGCTTTGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp AGCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAACTGTTATTTGACCCCTaGGCTGCTATCACAGGCACG +
Preference number: 4 (lower is better)
Translates to: SNSFSKTGNETRDEDKIKLLFDP*AAITGT
Trigger: CGTGCCTGTGATAGCAGCCCAGGGGTCAAATAACAG...TTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp AGCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAATCTCTGGGTTCCATCTaGATCTCAGAAGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SNSFSKTGNETRDEDKIKSLGSI*ISEGQG
Trigger: TCCCTGCCCTTCTGAGATCCAGATGGAACCCAGAGA...TTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp AGTTCTCCTGGGACAAGTTGTGAAAGGCTGTTTTTAAAGTCAAACAACAGATTTCTCTCCAGCTCCACTTaGTACACACAGTCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SSPGTSCERLFLKSNNRFLSSST*YTQSSL
Trigger: CAGAGACGACTGTGTGTACCAAGTGGAGCTGGAGAG...AAATCTGTTGTTTGACTTTAAAAACAGCCTTTCACAACTTGTCCCAGGAGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAACAACCCTCTGCTTTAGTCTaGCAAGTTCTTTCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: GISFHSPFLSCIAITEKQPSALV*QVLSKL
Trigger: GAGCTTTGAAAGAACTTGCCAGACTAAAGCAGAGGG...TTGTTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAACAAATCTCTTTGCAGTCCTaGTACTGGTTCTGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GISFHSPFLSCIAITEKQISLQS*YWFCSC
Trigger: GCAAGAACAGAACCAGTACCAGGACTGCAAAGAGAT...TTGTTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR TCA 90 bp AGAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGTGTTCTGTTGATCCTTaGACTGCTGAAACTCTTTTT +
Preference number: 4 (lower is better)
Translates to: RDEDKIKEKDFATLESHTCSVDP*TAETLF
Trigger: AAAAAGAGTTTCAGCAGTTCAAGGATCAACAGAACA...CGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp ACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGACTCCCCATCAAACTTTaGTTCCACCACGAGCAGATG +
Preference number: 4 (lower is better)
Translates to: THSVRLEMRLEMRTRLKRLPIKL*FHHEQM
Trigger: CATCTGCTCGTGGTGGAAGCAAAGTTTGATGGGGAG...TCTCTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp GAAGAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCGGGCCTTCTGAAGTTTaGCTTCTAGAATACTGTATT +
Preference number: 4 (lower is better)
Translates to: EEPTLGQDLLKQNTSVPFGPSEV*LLEYCI
Trigger: AATACAGTATTCTAGAAGGCAAACTTCAGAAGGCCC...GAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp GAAGAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCCGAGTTCACTTATTATaGGGTCCTCATGGTTATAGA +
Preference number: 4 (lower is better)
Translates to: EEPTLGQDLLKQNTSVPFRVHLL*GPHGYR
Trigger: TCTATAACCATGAGGACCGCATAATAAGTGAACTCG...GAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp ACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGAGATGCTTTGGACGTTTaGGGAAATGGCGACCTTCGA +
Preference number: 4 (lower is better)
Translates to: THSVRLEMRLEMRTRLKRDALDV*GNGDLR
Trigger: TCGAAGGTCGCCATTTCCCCAAACGTCCAAAGCATC...TCTCTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp GAAGAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCGTGTCTTCTCCTTTATaGGGGTTAAAACTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: EEPTLGQDLLKQNTSVPFVSSPL*GLKLSS
Trigger: AGAAGAGAGTTTTAACCCCCATAAAGGAGAAGACAC...GAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp AGCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAACTGTTGCATCATCCTTaGTTGGAGGCGTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SNSFSKTGNETRDEDKIKLLHHP*LEASGL
Trigger: CAAACCAGACGCCTCCAACCAAGGATGATGCAACAG...TTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp ATTGTGGTCAGACCAAGCTATTTTCTCATGGTCTTCAAGTGGAGTCCAATGAAAAAGAAAAACTCAGGCTaGCTTTCTGGAAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: IVVRPSYFLMVFKWSPMKKKNSG*LSGSFM
Trigger: CATGAAGCTTCCAGAAAGGCAGCCTGAGTTTTTCTT...TTTCATTGGACTCCACTTGAAGACCATGAGAAAATAGCTTGGTCTGACCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp GCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGCTGCAGCCGGATTTCTaGTTTGTTGTTCTGTTGATC +
Preference number: 4 (lower is better)
Translates to: ATHSVRLEMRLEMRTRLKLQPDF*FVVLLI
Trigger: GATCAACAGAACAACAAACCAGAAATCCGGCTGCAG...CTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR TCA 90 bp GGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAACAATCTTTTTGCTTCAGCTaGCTTTCAAATATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GISFHSPFLSCIAITEKQSFCFS*LSNMSS
Trigger: GGAAGACATATTTGAAAGTCAGCTGAAGCAAAAAGA...TTGTTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR TCA 90 bp AATTTCAAAGCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACACAACCTTCTCCAAGGTaGGGAGGTTTATTTCTGACT +
Preference number: 4 (lower is better)
Translates to: NFKATHSVRLEMRLEMRTQPSPR*GGLFLT
Trigger: AGTCAGAAATAAACCTCCTCACCTTGGAGAAGGTTG...TGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGCTTTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp GCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAAGAAAAACTCAGGCTaGCTTTCTGGAAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: ATHSVRLEMRLEMRTRLKKKNSG*LSGSFM
Trigger: CATGAAGCTTCCAGAAAGGCAGCCTGAGTTTTTCTT...CTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp AATTTCAAAGCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAAGGTATTTCTGTACTaGCAAGTGACTGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: NFKATHSVRLEMRLEMRTKVFLY*QVTGLH
Trigger: GTGGAGACCAGTCACTTGGCAGTACAGAAATACCTT...TGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGCTTTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp ACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGAAGTCATAATAGGAGCTaGACTGCCGAAGAATGGGTA +
Preference number: 4 (lower is better)
Translates to: THSVRLEMRLEMRTRLKRSHNRS*TAEEWV
Trigger: TACCCATTCTTCGGCAGTGCAGCTCCTATTATGACT...TCTCTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp GCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGGTTTATTTCTGACTaGAGCCGGATTTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: ATHSVRLEMRLEMRTRLKRFISD*SRISGL
Trigger: CAAACCAGAAATCCGGCTGCAGTCAGAAATAAACCT...CTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp TCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGAAATCCAGCAGTTCCTGCTaGTCAGTTCTCACTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SFSKTGNETRDEDKIKEKSSSSC*SVLTVS
Trigger: AGAAACAGTGAGAACTGAGCAGCAGGAACTGCTGGA...TTTCTCTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp TCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGAAAGTAGCAAATTCTGGCTaGTCAGTATGGTCGACAGGA +
Preference number: 4 (lower is better)
Translates to: SFSKTGNETRDEDKIKEKVANSG*SVWSTG
Trigger: TCCTGTCGACCATACTGACCAGCCAGAATTTGCTAC...TTTCTCTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp TCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGAAACTCAGTAGCAAATTCTaGCTGGTCAGTATGGTCGAC +
Preference number: 4 (lower is better)
Translates to: SFSKTGNETRDEDKIKEKLSSKF*LVSMVD
Trigger: GTCGACCATACTGACCAGCCAGAATTTGCTACTGAG...TTTCTCTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp AGCCCAAAGATGGCTTTCTGGAAGGCAAAGCACACACACATTTTAGAAGTCCTTTTTCTGGAAGCTTCATaGTACATGGAATTAACTGTT +
Preference number: 4 (lower is better)
Translates to: SPKMAFWKAKHTHILEVLFLEAS*YMELTV
Trigger: AACAGTTAATTCCATGTACCATGAAGCTTCCAGAAA...AAGGACTTCTAAAATGTGTGTGTGCTTTGCCTTCCAGAAAGCCATCTTTGGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CCA 90 bp ATTGTGGTCAGACCAAGCTATTTTCTCATGGTCTTCAAGTGGAGTCCAATGAAACAATATGCAGTTGACTaGAAAACTGAGTTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: IVVRPSYFLMVFKWSPMKQYAVD*KTEFQV
Trigger: GACTTGGAACTCAGTTTTCCAGTCAACTGCATATTG...TTTCATTGGACTCCACTTGAAGACCATGAGAAAATAGCTTGGTCTGACCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR GCA 90 bp TCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGAAACAACTGGGTGGCAAATaGAATCGTCACCGACAAAAT +
Preference number: 4 (lower is better)
Translates to: SFSKTGNETRDEDKIKEKQLGGK*NRHRQN
Trigger: ATTTTGTCGGTGACGATTGCATTTGCCACCCAGTTG...TTTCTCTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp GCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGGGGCCTTCTGAAGTTTaGCTTCTAGAATACTGTATT +
Preference number: 4 (lower is better)
Translates to: ATHSVRLEMRLEMRTRLKGPSEV*LLEYCI
Trigger: AATACAGTATTCTAGAAGGCAAACTTCAGAAGGCCC...CTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR GCA 90 bp AGCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAATCAAATATGTCTTCCTaGATCTCTTTCCACATCTCC +
Preference number: 4 (lower is better)
Translates to: SNSFSKTGNETRDEDKIKSNMSS*ISFHIS
Trigger: GGAGATGTGGAAAGAGATGCAGGAAGACATATTTGA...TTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp AGCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAACAATATGCAGTTGACTaGAAAACTGAGTTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: SNSFSKTGNETRDEDKIKQYAVD*KTEFQV
Trigger: GACTTGGAACTCAGTTTTCCAGTCAACTGCATATTG...TTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp GCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGTTTCTGGAAGCTTCATaGTACATGGAATTAACTGTT +
Preference number: 4 (lower is better)
Translates to: ATHSVRLEMRLEMRTRLKFLEAS*YMELTV
Trigger: AACAGTTAATTCCATGTACCATGAAGCTTCCAGAAA...CTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR TCA 90 bp TCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGAAATCTTTTTGCTTCAGCTaGCTTTCAAATATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SFSKTGNETRDEDKIKEKSFCFS*LSNMSS
Trigger: GGAAGACATATTTGAAAGTCAGCTGAAGCAAAAAGA...TTTCTCTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CCA 90 bp AATTTCAAAGCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAGCCTCATGTCCATTCTaGGTCTTTAATTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: NFKATHSVRLEMRLEMRTASCPF*VFNSIK
Trigger: TTTAATTGAATTAAAGACCCAGAATGGACATGAGGC...TGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGCTTTGAAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
3UTR CAA 72 bp TTTTTAAAAATGGCTACACTTATAATTGGCTTCAACTaGAAGATATCTACACTCAAAGGGAGCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: FLKMATLIIGFN*KISTLKGSRTQ
Trigger: CTGTGTCCTGCTCCCTTTGAGTGTAGATATCTTCAAGTTGAAGCCAATTATAAGTGTAGCCATTTTTAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS CCA 90 bp TGTCCTGATGTCACCACTTCTGACGCACCACAGGTGGCCTCTGGCTaGGCCAGCGAAGCAGGTACAGAACCGATGCCCTTCACAGTGGGC +
Preference number: 5 (lower is better)
Translates to: CPDVTTSDAPQVASG*ASEAGTEPMPFTVG
Trigger: GCCCACTGTGAAGGGCATCGGTTCTGTACCTGCTTCGCTGGCCCAGCCAGAGGCCACCTGTGGTGCGTCAGAAGTGGTGACATCAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 90 bp TCCACATCTCCAGCTCGAGGGCAGCCTTGTACTCTAAGGTCTCTCTaGGTTCCATCTGGATCTCAGAAGGGCAGGGAGCGGGAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: STSPARGQPCTLRSL*VPSGSQKGREREEA
Trigger: CGCCTCCTCCCGCTCCCTGCCCTTCTGAGATCCAGATGGAACCCAGAGAGACCTTAGAGTACAAGGCTGCCCTCGAGCTGGAGATGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 90 bp CACAGGTGGCCTCTGGCTGGGCCAGCGAAGCAGGTACAGAACCGATaGCCTTCACAGTGGGCTTTGGATCCTTGTCATACTGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: HRWPLAGPAKQVQNR*PSQWALDPCHTAGS
Trigger: AGAGCCTGCAGTATGACAAGGATCCAAAGCCCACTGTGAAGGGCATCGGTTCTGTACCTGCTTCGCTGGCCCAGCCAGAGGCCACCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 90 bp GCCTTCTTCCAGCCCAGAGCCCCTCGGGCTGCCCAGCTTCCCACTTaGAATCTCTTTGCAGTCCTGGTACTGGTTCTGTTCTTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: AFFQPRAPRAAQLPT*NLFAVLVLVLFLLP
Trigger: AGGCAGCAAGAACAGAACCAGTACCAGGACTGCAAAGAGATTGCAAGTGGGAAGCTGGGCAGCCCGAGGGGCTCTGGGCTGGAAGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS CCA 90 bp CAGCAATCTTCTGTCCTGATGTCACCACTTCTGACGCACCACAGGTaGCCTCTGGCTGGGCCAGCGAAGCAGGTACAGAACCGATGCCCT +
Preference number: 5 (lower is better)
Translates to: QQSSVLMSPLLTHHR*PLAGPAKQVQNRCP
Trigger: AGGGCATCGGTTCTGTACCTGCTTCGCTGGCCCAGCCAGAGGCCACCTGTGGTGCGTCAGAAGTGGTGACATCAGGACAGAAGATTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 90 bp AGCTCGAGGGCAGCCTTGTACTCTAAGGTCTCTCTGGGTTCCATCTaGATCTCAGAAGGGCAGGGAGCGGGAGGAGGCGAAGATGGCTTC +
Preference number: 5 (lower is better)
Translates to: SSRAALYSKVSLGSI*ISEGQGAGGGEDGF
Trigger: GAAGCCATCTTCGCCTCCTCCCGCTCCCTGCCCTTCTGAGATCCAGATGGAACCCAGAGAGACCTTAGAGTACAAGGCTGCCCTCGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 90 bp TCAGCTTCAGCCTCTCCAGCTCCACTTGGTACACACAGTCGTCTCTaGCCCTTCGGACAGAGTCCTGCAGCTCTTGAAGGTTCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: SASASPAPLGTHSRL*PFGQSPAALEGSAP
Trigger: GGGAGCGGAACCTTCAAGAGCTGCAGGACTCTGTCCGAAGGGCCAGAGACGACTGTGTGTACCAAGTGGAGCTGGAGAGGCTGAAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 90 bp ACGCCCACAGTTGGGGCCAGGTCCAGAGGGACTGGAGCTAGCTTCTaGTTGGCTCGGTTTGGAGGGTCAAGGGTAAAAGCACCTTCTACT +
Preference number: 5 (lower is better)
Translates to: TPTVGARSRGTGASF*LARFGGSRVKAPST
Trigger: AGTAGAAGGTGCTTTTACCCTTGACCCTCCAAACCGAGCCAAGCAGAAGCTAGCTCCAGTCCCTCTGGACCTGGCCCCAACTGTGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 90 bp TCAGGTAGTCATCCAAGCCTTCTTCCAGCCCAGAGCCCCTCGGGCTaGCCAGCTTCCCACTTGCAATCTCTTTGCAGTCCTGGTACTGGT +
Preference number: 5 (lower is better)
Translates to: SGSHPSLLPAQSPSG*PASHLQSLCSPGTG
Trigger: ACCAGTACCAGGACTGCAAAGAGATTGCAAGTGGGAAGCTGGGCAGCCCGAGGGGCTCTGGGCTGGAAGAAGGCTTGGATGACTACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CAA 90 bp GATGGGGTGGTTTGGAGAGCGCAGTGTGAAGGAGCTCTGGAGGGTTACGGGCTTGTGGGCTTTGGATCCTaGTCATACTGCAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: DGVVWRAQCEGALEGYGLVGFGS*SYCRLS
Trigger: GGAGAGCCTGCAGTATGACAAGGATCCAAAGCCCAC...AAGCCCGTAACCCTCCAGAGCTCCTTCACACTGCGCTCTCCAAACCACCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS TCA 90 bp TACACACAGTCGTCTCTGGCCCTTCGGACAGAGTCCTGCAGCTCTTaGAGGTTCCGCTCCCGTTCTAACTGCAGCTCCTTTCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: YTQSSLALRTESCSS*RFRSRSNCSSFLSL
Trigger: GAGAGAGAGAAAGGAGCTGCAGTTAGAACGGGAGCGGAACCTTCAAGAGCTGCAGGACTCTGTCCGAAGGGCCAGAGACGACTGTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 90 bp CCCCTCGGGCTGCCCAGCTTCCCACTTGCAATCTCTTTGCAGTCCTaGTACTGGTTCTGTTCTTGCTGCCTTAACCTGTTCAGCTCGTTC +
Preference number: 5 (lower is better)
Translates to: PLGLPSFPLAISLQS*YWFCSCCLNLFSSF
Trigger: GAACGAGCTGAACAGGTTAAGGCAGCAAGAACAGAACCAGTACCAGGACTGCAAAGAGATTGCAAGTGGGAAGCTGGGCAGCCCGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CAA 90 bp GATGGGGTGGTTTGGAGAGCGCAGTGTGAAGGAGCTCTGGAGGGTTACGGGCTTTTTAAGGCGGGCCATTaGACTTTCTTGCTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: DGVVWRAQCEGALEGYGLFKAGH*TFLLPL
Trigger: CAGAGGGAGCAAGAAAGTCAAATGGCCCGCCTTAAA...AAGCCCGTAACCCTCCAGAGCTCCTTCACACTGCGCTCTCCAAACCACCCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS TCA 90 bp TTTCCTTGGCAGAAGTCTGCGGGTCCAAGGCAAAGCACTGGAGTTTaGTCGGCGTGCGCTGTAACCGGTGCTGATGAAGGACTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: FPWQKSAGPRQSTGV*SACAVTGADEGLSC
Trigger: ACAGGAAAGTCCTTCATCAGCACCGGTTACAGCGCACGCCGATCAAACTCCAGTGCTTTGCCTTGGACCCGCAGACTTCTGCCAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 90 bp GTAGCCAGCTGCTCCCCATCAAACTTTGCTTCCACCACGAGCAGATaGTTTGGACGTTTGGGGAAATGGCGACCTTCGAGGATGGATACG +
Preference number: 5 (lower is better)
Translates to: VASCSPSNFASTTSR*FGRLGKWRPSRMDT
Trigger: CGTATCCATCCTCGAAGGTCGCCATTTCCCCAAACGTCCAAAGCATCTGCTCGTGGTGGAAGCAAAGTTTGATGGGGAGCAGCTGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 90 bp CTTTGGATCCTTGTCATACTGCAGGCTCTCCACTTCACTTTCTGTTaGATCATCCTTGGTTGGAGGCGTCTGGTTTGGAGGTGGGGGCGG +
Preference number: 5 (lower is better)
Translates to: LWILVILQALHFTFC*IILGWRRLVWRWGR
Trigger: CCGCCCCCACCTCCAAACCAGACGCCTCCAACCAAGGATGATGCAACAGAAAGTGAAGTGGAGAGCCTGCAGTATGACAAGGATCCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 90 bp GGCCAGCGAAGCAGGTACAGAACCGATGCCCTTCACAGTGGGCTTTaGATCCTTGTCATACTGCAGGCTCTCCACTTCACTTTCTGTTGC +
Preference number: 5 (lower is better)
Translates to: GQRSRYRTDALHSGL*ILVILQALHFTFCC
Trigger: GCAACAGAAAGTGAAGTGGAGAGCCTGCAGTATGACAAGGATCCAAAGCCCACTGTGAAGGGCATCGGTTCTGTACCTGCTTCGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp TGCAGAGGGAGGGAAGCAGCTCCGTGGTGTTCTCAGCTAATGTCGCTAGGTATCAGATGCTTTGGACGTTaGGGGAAATGGCGACCTTCG +
Preference number: 5 (lower is better)
Translates to: CRGREAAPWCSQLMSLGIRCFGR*GKWRPS
Trigger: CGAAGGTCGCCATTTCCCCAAACGTCCAAAGCATCT...GATACCTAGCGACATTAGCTGAGAACACCACGGAGCTGCTTCCCTCCCTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS TCA 90 bp CTGCTTCTGCACTGGCCAGCTGCTGCTCACGGGTCTCTAGCTCCGTaGGGGCCTTCTGAAGTTTGCCTTCTAGAATACTGTATTCAGCTA +
Preference number: 5 (lower is better)
Translates to: LLLHWPAAAHGSLAP*GPSEVCLLEYCIQL
Trigger: TAGCTGAATACAGTATTCTAGAAGGCAAACTTCAGAAGGCCCTCACGGAGCTAGAGACCCGTGAGCAGCAGCTGGCCAGTGCAGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 90 bp AGTATGGTCGACAGGATCAGTAGCCAGCTGCTCCCCATCAAACTTTaGTTCCACCACGAGCAGATGCTTTGGACGTTTGGGGAAATGGCG +
Preference number: 5 (lower is better)
Translates to: SMVDRISSQLLPIKL*FHHEQMLWTFGEMA
Trigger: CGCCATTTCCCCAAACGTCCAAAGCATCTGCTCGTGGTGGAAGCAAAGTTTGATGGGGAGCAGCTGGCTACTGATCCTGTCGACCATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 90 bp CAGCTGCTCCCCATCAAACTTTGCTTCCACCACGAGCAGATGCTTTaGACGTTTGGGGAAATGGCGACCTTCGAGGATGGATACGACGAT +
Preference number: 5 (lower is better)
Translates to: QLLPIKLCFHHEQML*TFGEMATFEDGYDD
Trigger: ATCGTCGTATCCATCCTCGAAGGTCGCCATTTCCCCAAACGTCCAAAGCATCTGCTCGTGGTGGAAGCAAAGTTTGATGGGGAGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp TCTGGAGGGTTACGGGCTTGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGACTTGAACTTGGTGTATTaGTTACTCAGCAGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: SGGLRACTGLAGVPLKTDLNLVY*LLSSWY
Trigger: GTACCAGCTGCTGAGTAACAAATACACCAAGTTCAA...GTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCCCGTAACCCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CAA 90 bp GGCTTGCACTGGGCTCGCTGGGGTGCCTCTGAAAACAGACTGACTGCAGAGGGATACCTCAATATGCAGTaGACTGGAAAACTGAGTTCC +
Preference number: 5 (lower is better)
Translates to: GLHWARWGASENRLTAEGYLNMQ*TGKLSS
Trigger: GGAACTCAGTTTTCCAGTCAACTGCATATTGAGGTA...TCCCTCTGCAGTCAGTCTGTTTTCAGAGGCACCCCAGCGAGCCCAGTGCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS GCA 90 bp GCAAATTCTGGCTGGTCAGTATGGTCGACAGGATCAGTAGCCAGCTaGTCCCCATCAAACTTTGCTTCCACCACGAGCAGATGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: ANSGWSVWSTGSVAS*SPSNFASTTSRCFG
Trigger: TCCAAAGCATCTGCTCGTGGTGGAAGCAAAGTTTGATGGGGAGCAGCTGGCTACTGATCCTGTCGACCATACTGACCAGCCAGAATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 90 bp TCCTTCCTCATTCAATACTGCAACAATGTCCTTCGGGTCAACTCCTaGCAGGCTAGCAAGAACTTTTCCATCCCGAGGCGGGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: SFLIQYCNNVLRVNS*QASKNFSIPRRGCF
Trigger: AAAGCAGCCCCGCCTCGGGATGGAAAAGTTCTTGCTAGCCTGGCAGGAGTTGACCCGAAGGACATTGTTGCAGTATTGAATGAGGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 90 bp CTCCGCTGGTCCAATCTGATGGTAGCCTCCTTCCTCATTCAATACTaGAACAATGTCCTTCGGGTCAACTCCTGCCAGGCTAGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: LRWSNLMVASFLIQY*NNVLRVNSCQASKN
Trigger: GTTCTTGCTAGCCTGGCAGGAGTTGACCCGAAGGACATTGTTGCAGTATTGAATGAGGAAGGAGGCTACCATCAGATTGGACCAGCGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 90 bp GCTGCTATCACAGGCACGCTCTCACTGTACGTCTGTCGCCAGCACTaGTCACCATTAGCACCTAAAAACCGGGTCTTTTCTGAAGACAAG +
Preference number: 5 (lower is better)
Translates to: AAITGTLSLYVCRQH*SPLAPKNRVFSEDK
Trigger: CTTGTCTTCAGAAAAGACCCGGTTTTTAGGTGCTAATGGTGAGCAGTGCTGGCGACAGACGTACAGTGAGAGCGTGCCTGTGATAGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 90 bp ACTTTCCTGTCAATCTCCCAGGCTAGCTCAGTAGCAAATTCTGGCTaGTCAGTATGGTCGACAGGATCAGTAGCCAGCTGCTCCCCATCA +
Preference number: 5 (lower is better)
Translates to: TFLSISQASSVANSG*SVWSTGSVASCSPS
Trigger: TGATGGGGAGCAGCTGGCTACTGATCCTGTCGACCATACTGACCAGCCAGAATTTGCTACTGAGCTAGCCTGGGAGATTGACAGGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp GATGGGGTGGTTTGGAGAGCGCAGTGTGAAGGAGCTCTGGAGGGTTACGGGCTTGTGAGCCAGTTCTTTTaGCTTCAGCTGACTTTCAAA +
Preference number: 5 (lower is better)
Translates to: DGVVWRAQCEGALEGYGLVSQFF*LQLTFK
Trigger: TTTGAAAGTCAGCTGAAGCAAAAAGAACTGGCTCAC...AAGCCCGTAACCCTCCAGAGCTCCTTCACACTGCGCTCTCCAAACCACCCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS TCA 90 bp CTGGCCAGCTGCTGCTCACGGGTCTCTAGCTCCGTGAGGGCCTTCTaGAGTTTGCCTTCTAGAATACTGTATTCAGCTACCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LASCCSRVSSSVRAF*SLPSRILYSATFFF
Trigger: GAAGAAAAAGGTAGCTGAATACAGTATTCTAGAAGGCAAACTTCAGAAGGCCCTCACGGAGCTAGAGACCCGTGAGCAGCAGCTGGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 90 bp CTATCCACCTGGGCCTTTGTATCTGTCTCCAAAGTGAGGCTGATCTaGACCTCGGCCTTGAACTTGGTGTATTTGTTACTCAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LSTWAFVSVSKVRLI*TSALNLVYLLLSSW
Trigger: CCAGCTGCTGAGTAACAAATACACCAAGTTCAAGGCCGAGGTGCAGATCAGCCTCACTTTGGAGACAGATACAAAGGCCCAGGTGGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 90 bp TCAATCTCCCAGGCTAGCTCAGTAGCAAATTCTGGCTGGTCAGTATaGTCGACAGGATCAGTAGCCAGCTGCTCCCCATCAAACTTTGCT +
Preference number: 5 (lower is better)
Translates to: SISQASSVANSGWSV*STGSVASCSPSNFA
Trigger: AGCAAAGTTTGATGGGGAGCAGCTGGCTACTGATCCTGTCGACCATACTGACCAGCCAGAATTTGCTACTGAGCTAGCCTGGGAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 90 bp GGGCTGCCCAGCTTCCCACTTGCAATCTCTTTGCAGTCCTGGTACTaGTTCTGTTCTTGCTGCCTTAACCTGTTCAGCTCGTTCCTTATA +
Preference number: 5 (lower is better)
Translates to: GLPSFPLAISLQSWY*FCSCCLNLFSSFLI
Trigger: TATAAGGAACGAGCTGAACAGGTTAAGGCAGCAAGAACAGAACCAGTACCAGGACTGCAAAGAGATTGCAAGTGGGAAGCTGGGCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CAA 90 bp AGAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGGAGCTAGCTTCTGCTaGGCTCGGTTTGGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: RDEDKIKEKDFATLESHTGASFC*ARFGGS
Trigger: TGACCCTCCAAACCGAGCCAAGCAGAAGCTAGCTCC...CGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS GCA 90 bp CAGGTACACACGCAGAATCTCCACACTGCTGCGTATACGAACAGATaGCCTCTCGGGCTCAAAGTTTGGGTTGATCAAATCACTGAAAGG +
Preference number: 5 (lower is better)
Translates to: QVHTQNLHTAAYTNR*PLGLKVWVDQITER
Trigger: CCTTTCAGTGATTTGATCAACCCAAACTTTGAGCCCGAGAGGGCATCTGTTCGTATACGCAGCAGTGTGGAGATTCTGCGTGTGTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp AGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATATCAGGGGTGGGCTTTGGATCCTaGTCATACTGCAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: RLKRKTSPPWKATRLISGVGFGS*SYCRLS
Trigger: GGAGAGCCTGCAGTATGACAAGGATCCAAAGCCCAC...CCCTGATATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp GAGACTAGAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCAGAGTCCTGCAGCTCTaGAAGGTTCCGCTCCCGTTC +
Preference number: 5 (lower is better)
Translates to: ETRDEDKIKEKDFATLESRVLQL*KVPLPF
Trigger: GAACGGGAGCGGAACCTTCAAGAGCTGCAGGACTCT...GCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTCTAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS GCA 90 bp CCACTTGCAATCTCTTTGCAGTCCTGGTACTGGTTCTGTTCTTGCTaGCTTAACCTGTTCAGCTCGTTCCTTATATCCAGCAGTTCCTGC +
Preference number: 5 (lower is better)
Translates to: PLAISLQSWYWFCSC*LNLFSSFLISSSSC
Trigger: GCAGGAACTGCTGGATATAAGGAACGAGCTGAACAGGTTAAGGCAGCAAGAACAGAACCAGTACCAGGACTGCAAAGAGATTGCAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CAA 90 bp AGCCCAAAGATGGCTTTCTGGAAGGCAAAGCACACACACATTTTAGAAGTCCTTCCACGAGCAGATGCTTaGGACGTTTGGGGAAATGGC +
Preference number: 5 (lower is better)
Translates to: SPKMAFWKAKHTHILEVLPRADA*DVWGNG
Trigger: GCCATTTCCCCAAACGTCCAAAGCATCTGCTCGTGG...AAGGACTTCTAAAATGTGTGTGTGCTTTGCCTTCCAGAAAGCCATCTTTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CAA 90 bp ACACAGCGTCTCTGCCCGAGACTGCTTTATTTTCAAAGTTGTCATCTGCAAATAAGAGTCCTGCAGCTCTaGAAGGTTCCGCTCCCGTTC +
Preference number: 5 (lower is better)
Translates to: TQRLCPRLLYFQSCHLQIRVLQL*KVPLPF
Trigger: GAACGGGAGCGGAACCTTCAAGAGCTGCAGGACTCT...TATTTGCAGATGACAACTTTGAAAATAAAGCAGTCTCGGGCAGAGACGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS CCA 90 bp CACACTGCTGCGTATACGAACAGATGCCCTCTCGGGCTCAAAGTTTaGGTTGATCAAATCACTGAAAGGCTCGTTTGTAACATCGTTTCC +
Preference number: 5 (lower is better)
Translates to: HTAAYTNRCPLGLKV*VDQITERLVCNIVS
Trigger: GGAAACGATGTTACAAACGAGCCTTTCAGTGATTTGATCAACCCAAACTTTGAGCCCGAGAGGGCATCTGTTCGTATACGCAGCAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp AGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATAGCTCCCCATCAAACTTaGCTTCCACCACGAGCAGAT +
Preference number: 5 (lower is better)
Translates to: RTRLKRKTSPPWKATRLIAPHQT*LPPRAD
Trigger: ATCTGCTCGTGGTGGAAGCAAAGTTTGATGGGGAGC...TATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp ATTGTGGTCAGACCAAGCTATTTTCTCATGGTCTTCAAGTGGAGTCCAATGAAAGGAGCTAGCTTCTGCTaGGCTCGGTTTGGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: IVVRPSYFLMVFKWSPMKGASFC*ARFGGS
Trigger: TGACCCTCCAAACCGAGCCAAGCAGAAGCTAGCTCC...TTTCATTGGACTCCACTTGAAGACCATGAGAAAATAGCTTGGTCTGACCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CAA 90 bp GAAGAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCTGCCCAGCTTCCCACTaGCAATCTCTTTGCAGTCCT +
Preference number: 5 (lower is better)
Translates to: EEPTLGQDLLKQNTSVPFCPASH*QSLCSP
Trigger: AGGACTGCAAAGAGATTGCAAGTGGGAAGCTGGGCA...GAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS GCA 90 bp CATGTTTTTCCGAACTTCTACGGGAGGGTTAGTCATAATAGGAGCTaGACTGCCGAAGAATGGGTAGGAGTACCTCAATATGCAGTTGAC +
Preference number: 5 (lower is better)
Translates to: HVFPNFYGRVSHNRS*TAEEWVGVPQYAVD
Trigger: GTCAACTGCATATTGAGGTACTCCTACCCATTCTTCGGCAGTGCAGCTCCTATTATGACTAACCCTCCCGTAGAAGTTCGGAAAAACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 90 bp TTCTACGGGAGGGTTAGTCATAATAGGAGCTGCACTGCCGAAGAATaGGTAGGAGTACCTCAATATGCAGTTGACTGGAAAACTGAGTTC +
Preference number: 5 (lower is better)
Translates to: FYGRVSHNRSCTAEE*VGVPQYAVDWKTEF
Trigger: GAACTCAGTTTTCCAGTCAACTGCATATTGAGGTACTCCTACCCATTCTTCGGCAGTGCAGCTCCTATTATGACTAACCCTCCCGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp ATTGTGGTCAGACCAAGCTATTTTCTCATGGTCTTCAAGTGGAGTCCAATGAAATACGACGATGAGCAGTaGGTCGGACTTGGGGACCAT +
Preference number: 5 (lower is better)
Translates to: IVVRPSYFLMVFKWSPMKYDDEQ*VGLGDH
Trigger: ATGGTCCCCAAGTCCGACCAACTGCTCATCGTCGTA...TTTCATTGGACTCCACTTGAAGACCATGAGAAAATAGCTTGGTCTGACCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CAA 90 bp AGAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGACCTCGGCCTTGAACTaGGTGTATTTGTTACTCAGC +
Preference number: 5 (lower is better)
Translates to: RDEDKIKEKDFATLESHTTSALN*VYLLLS
Trigger: GCTGAGTAACAAATACACCAAGTTCAAGGCCGAGGT...CGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp GAAGAACCAACGCTGGGCCAGGACCTTCTAAAACAAAATACTTCTGTTCCATTCTCTGTTGCATCATCCTaGGTTGGAGGCGTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: EEPTLGQDLLKQNTSVPFSVASS*VGGVWF
Trigger: AAACCAGACGCCTCCAACCAAGGATGATGCAACAGA...GAATGGAACAGAAGTATTTTGTTTTAGAAGGTCCTGGCCCAGCGTTGGTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS GCA 90 bp CGGTTTGGAGGGTCAAGGGTAAAAGCACCTTCTACTGTGACCGGATaGTGGTTAATCTCTGTACTGCCCTTCTTCAGTAATCCATTTAAA +
Preference number: 5 (lower is better)
Translates to: RFGGSRVKAPSTVTG*WLISVLPFFSNPFK
Trigger: TTTAAATGGATTACTGAAGAAGGGCAGTACAGAGATTAACCAGCATCCGGTCACAGTAGAAGGTGCTTTTACCCTTGACCCTCCAAACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp TCAAAGGGAGCAGGACACAGCGTGTTTAAAGTGCAACATATTCTCTCTTGGCTCATCTGCACCTCGGCCTaGAACTTGGTGTATTTGTTA +
Preference number: 5 (lower is better)
Translates to: SKGAGHSVFKVQHILSWLICTSA*NLVYLL
Trigger: TAACAAATACACCAAGTTCAAGGCCGAGGTGCAGAT...GAGCCAAGAGAGAATATGTTGCACTTTAAACACGCTGTGTCCTGCTCCCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CAA 90 bp ATTGTGGTCAGACCAAGCTATTTTCTCATGGTCTTCAAGTGGAGTCCAATGAAATTGCATCATCCTTGGTaGGAGGCGTCTGGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: IVVRPSYFLMVFKWSPMKLHHPW*EASGLE
Trigger: CTCCAAACCAGACGCCTCCAACCAAGGATGATGCAA...TTTCATTGGACTCCACTTGAAGACCATGAGAAAATAGCTTGGTCTGACCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CAA 90 bp AGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATACTCTTCTGCAAGAGCTaGCATGTGAGCCAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: RTRLKRKTSPPWKATRLILFCKS*HVSQFF
Trigger: AAAGAACTGGCTCACATGCAAGCTCTTGCAGAAGAG...TATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS CCA 90 bp TTTGGAGGGTCAAGGGTAAAAGCACCTTCTACTGTGACCGGATGCTaGTTAATCTCTGTACTGCCCTTCTTCAGTAATCCATTTAAAGGT +
Preference number: 5 (lower is better)
Translates to: FGGSRVKAPSTVTGC*LISVLPFFSNPFKG
Trigger: ACCTTTAAATGGATTACTGAAGAAGGGCAGTACAGAGATTAACCAGCATCCGGTCACAGTAGAAGGTGCTTTTACCCTTGACCCTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp AGCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAATACGACGATGAGCAGTaGGTCGGACTTGGGGACCAT +
Preference number: 5 (lower is better)
Translates to: SNSFSKTGNETRDEDKIKYDDEQ*VGLGDH
Trigger: ATGGTCCCCAAGTCCGACCAACTGCTCATCGTCGTA...TTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp GCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGATGCTTTGGACGTTaGGGGAAATGGCGACCTTCG +
Preference number: 5 (lower is better)
Translates to: ATHSVRLEMRLEMRTRLKRCFGR*GKWRPS
Trigger: CGAAGGTCGCCATTTCCCCAAACGTCCAAAGCATCT...CTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp AGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATATCAGGGTTGAACTTGGTGTATTaGTTACTCAGCAGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: RLKRKTSPPWKATRLISGLNLVY*LLSSWY
Trigger: GTACCAGCTGCTGAGTAACAAATACACCAAGTTCAA...CCCTGATATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp GCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGTTGCATCATCCTTGGTaGGAGGCGTCTGGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: ATHSVRLEMRLEMRTRLKLHHPW*EASGLE
Trigger: CTCCAAACCAGACGCCTCCAACCAAGGATGATGCAA...CTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp AGAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGTACCTCAATATGCAGTaGACTGGAAAACTGAGTTCC +
Preference number: 5 (lower is better)
Translates to: RDEDKIKEKDFATLESHTYLNMQ*TGKLSS
Trigger: GGAACTCAGTTTTCCAGTCAACTGCATATTGAGGTA...CGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp AGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATATCAGGGGTGAGCCAGTTCTTTTaGCTTCAGCTGACTTTCAAA +
Preference number: 5 (lower is better)
Translates to: RLKRKTSPPWKATRLISGVSQFF*LQLTFK
Trigger: TTTGAAAGTCAGCTGAAGCAAAAAGAACTGGCTCAC...CCCTGATATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp CTAGGTATCAGTTTCCATAGTCCATTCCTGAGCTGTATCGCTATCACTGAGAAACTCTTCTGCAAGAGCTaGCATGTGAGCCAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: LGISFHSPFLSCIAITEKLFCKS*HVSQFF
Trigger: AAAGAACTGGCTCACATGCAAGCTCTTGCAGAAGAG...TTTCTCAGTGATAGCGATACAGCTCAGGAATGGACTATGGAAACTGATACCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CAA 90 bp AGTTCTCCTGGGACAAGTTGTGAAAGGCTGTTTTTAAAGTCAAACAACAGATTTGCTCCCCATCAAACTTaGCTTCCACCACGAGCAGAT +
Preference number: 5 (lower is better)
Translates to: SSPGTSCERLFLKSNNRFAPHQT*LPPRAD
Trigger: ATCTGCTCGTGGTGGAAGCAAAGTTTGATGGGGAGC...AAATCTGTTGTTTGACTTTAAAAACAGCCTTTCACAACTTGTCCCAGGAGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CAA 90 bp GAGACTAGAGATGAGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCATTTGGGAGCCTGCTTaGTTTCTTGAGCTGTTCTTA +
Preference number: 5 (lower is better)
Translates to: ETRDEDKIKEKDFATLESIWEPA*FLELFL
Trigger: TAAGAACAGCTCAAGAAACAAAGCAGGCTCCCAAAT...GCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCTCATCTCTAGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp ATTGTGGTCAGACCAAGCTATTTTCTCATGGTCTTCAAGTGGAGTCCAATGAAAACCTCGGCCTTGAACTaGGTGTATTTGTTACTCAGC +
Preference number: 5 (lower is better)
Translates to: IVVRPSYFLMVFKWSPMKTSALN*VYLLLS
Trigger: GCTGAGTAACAAATACACCAAGTTCAAGGCCGAGGT...TTTCATTGGACTCCACTTGAAGACCATGAGAAAATAGCTTGGTCTGACCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS TCA 90 bp CTTTCTTTCAAGTTCAACCTTCTCCAAGGTGAGGAGGTTTATTTCTaGCTGCAGCCGGATTTCTGGTTTGTTGTTCTGTTGATCCTTGAA +
Preference number: 5 (lower is better)
Translates to: LSFKFNLLQGEEVYF*LQPDFWFVVLLILE
Trigger: TTCAAGGATCAACAGAACAACAAACCAGAAATCCGGCTGCAGTCAGAAATAAACCTCCTCACCTTGGAGAAGGTTGAACTTGAAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 90 bp GGGGTTAAAACTCTCTTCTGTGAATGTTCTGCCTCATGTCCATTCTaGGTCTTTAATTCAATTAAAGACTGGGAATCGATGCCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: GVKTLFCECSASCPF*VFNSIKDWESMPSL
Trigger: GAGAGAAGGCATCGATTCCCAGTCTTTAATTGAATTAAAGACCCAGAATGGACATGAGGCAGAACATTCACAGAAGAGAGTTTTAACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp AGCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAATTTAAGGCGGGCCATTaGACTTTCTTGCTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: SNSFSKTGNETRDEDKIKFKAGH*TFLLPL
Trigger: CAGAGGGAGCAAGAAAGTCAAATGGCCCGCCTTAAA...TTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp AGTTCTCCTGGGACAAGTTGTGAAAGGCTGTTTTTAAAGTCAAACAACAGATTTCCACTTGCAATCTCTTaGCAGTCCTGGTACTGGTTC +
Preference number: 5 (lower is better)
Translates to: SSPGTSCERLFLKSNNRFPLAIS*QSWYWF
Trigger: GAACCAGTACCAGGACTGCAAAGAGATTGCAAGTGG...AAATCTGTTGTTTGACTTTAAAAACAGCCTTTCACAACTTGTCCCAGGAGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CAA 90 bp AGCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGCTATCCGACCTGTGTaGGTGAGAGAAGGAATGGTT +
Preference number: 5 (lower is better)
Translates to: SNSFSKTGNETRDEDKIKAIRPV*VREGMV
Trigger: AACCATTCCTTCTCTCACCAACACAGGTCGGATAGC...TTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp ATTGTGGTCAGACCAAGCTATTTTCTCATGGTCTTCAAGTGGAGTCCAATGAAAATTTGGGAGCCTGCTTaGTTTCTTGAGCTGTTCTTA +
Preference number: 5 (lower is better)
Translates to: IVVRPSYFLMVFKWSPMKIWEPA*FLELFL
Trigger: TAAGAACAGCTCAAGAAACAAAGCAGGCTCCCAAAT...TTTCATTGGACTCCACTTGAAGACCATGAGAAAATAGCTTGGTCTGACCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CAA 90 bp GCAACTCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGATCTGCACCTCGGCCTaGAACTTGGTGTATTTGTTA +
Preference number: 5 (lower is better)
Translates to: ATHSVRLEMRLEMRTRLKICTSA*NLVYLL
Trigger: TAACAAATACACCAAGTTCAAGGCCGAGGTGCAGAT...CTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGAGTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp TCATTCAGTAAGACTGGAAATGAGACTAGAGATGAGGACAAGATTAAAGAGAAATCTGTTGCATCATCCTaGGTTGGAGGCGTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: SFSKTGNETRDEDKIKEKSVASS*VGGVWF
Trigger: AAACCAGACGCCTCCAACCAAGGATGATGCAACAGA...TTTCTCTTTAATCTTGTCCTCATCTCTAGTCTCATTTCCAGTCTTACTGAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS-3UTR CAA 90 bp AGCCCAAAGATGGCTTTCTGGAAGGCAAAGCACACACACATTTTAGAAGTCCTTAAAGTCTTATACTTATaGCCAGCATCATTAAGCTGC +
Preference number: 5 (lower is better)
Translates to: SPKMAFWKAKHTHILEVLKVLYL*PASLSC
Trigger: GCAGCTTAATGATGCTGGCAATAAGTATAAGACTTT...AAGGACTTCTAAAATGTGTGTGTGCTTTGCCTTCCAGAAAGCCATCTTTGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS-3UTR CAA 90 bp AGGACAAGATTAAAGAGAAAGACTTCGCCACCTTGGAAAGCCACACGGCTAATAAAAGTCTTATACTTATaGCCAGCATCATTAAGCTGC +
Preference number: 5 (lower is better)
Translates to: RTRLKRKTSPPWKATRLIKVLYL*PASLSC
Trigger: GCAGCTTAATGATGCTGGCAATAAGTATAAGACTTT...TATTAGCCGTGTGGCTTTCCAAGGTGGCGAAGTCTTTCTCTTTAATCTTGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000237062.2
CDS TCA 90 bp TTTCTGACTGCAGCCGGATTTCTGGTTTGTTGTTCTGTTGATCCTTaGACTGCTGAAACTCTTTTTCCAAAGTCTTATACTTATTGCCAG +
Preference number: 5 (lower is better)
Translates to: FLTAAGFLVCCSVDP*TAETLFPKSYTYCQ
Trigger: CTGGCAATAAGTATAAGACTTTGGAAAAAGAGTTTCAGCAGTTCAAGGATCAACAGAACAACAAACCAGAAATCCGGCTGCAGTCAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp GTCACCACTTCTGACGCACCACAGGTGGCCTCTGGCTaGGCCAGCGAAGCAGGTACAGAACCGATGCCCTTC +
Preference number: 6 (lower is better)
Translates to: VTTSDAPQVASG*ASEAGTEPMPF
Trigger: GAAGGGCATCGGTTCTGTACCTGCTTCGCTGGCCCAGCCAGAGGCCACCTGTGGTGCGTCAGAAGTGGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 72 bp CAGCCCAGAGCCCCTCGGGCTGCCCAGCTTCCCACTTaGAATCTCTTTGCAGTCCTGGTACTGGTTCTGTTC +
Preference number: 6 (lower is better)
Translates to: QPRAPRAAQLPT*NLFAVLVLVLF
Trigger: GAACAGAACCAGTACCAGGACTGCAAAGAGATTGCAAGTGGGAAGCTGGGCAGCCCGAGGGGCTCTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS CCA 72 bp CCAGCTCGAGGGCAGCCTTGTACTCTAAGGTCTCTCTaGGTTCCATCTGGATCTCAGAAGGGCAGGGAGCGG +
Preference number: 6 (lower is better)
Translates to: PARGQPCTLRSL*VPSGSQKGRER
Trigger: CCGCTCCCTGCCCTTCTGAGATCCAGATGGAACCCAGAGAGACCTTAGAGTACAAGGCTGCCCTCGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 90 bp AGCCTTCTTCCAGCCCAGAGCCCCTCGGGCTGCCCAGCTTCCCACTaGCAATCTCTTTGCAGTCCTGGTACTGGTTCTGTTCTTGCTGCC +
Preference number: 6 (lower is better)
Translates to: SLLPAQSPSGCPASH*QSLCSPGTGSVLAA
Trigger: GGCAGCAAGAACAGAACCAGTACCAGGACTGCAAAGAGATTGCAAGTGGGAAGCTGGGCAGCCCGAGGGGCTCTGGGCTGGAAGAAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS CAA 90 bp CCCACAGTTGGGGCCAGGTCCAGAGGGACTGGAGCTAGCTTCTGCTaGGCTCGGTTTGGAGGGTCAAGGGTAAAAGCACCTTCTACTGTG +
Preference number: 6 (lower is better)
Translates to: PTVGARSRGTGASFC*ARFGGSRVKAPSTV
Trigger: CACAGTAGAAGGTGCTTTTACCCTTGACCCTCCAAACCGAGCCAAGCAGAAGCTAGCTCCAGTCCCTCTGGACCTGGCCCCAACTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp GCCTCTCCAGCTCCACTTGGTACACACAGTCGTCTCTaGCCCTTCGGACAGAGTCCTGCAGCTCTTGAAGGT +
Preference number: 6 (lower is better)
Translates to: ASPAPLGTHSRL*PFGQSPAALEG
Trigger: ACCTTCAAGAGCTGCAGGACTCTGTCCGAAGGGCCAGAGACGACTGTGTGTACCAAGTGGAGCTGGAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp TCCAGCTGCTTCAGCTTCAGCCTCTCCAGCTCCACTTaGTACACACAGTCGTCTCTGGCCCTTCGGACAGAG +
Preference number: 6 (lower is better)
Translates to: SSCFSFSLSSST*YTQSSLALRTE
Trigger: CTCTGTCCGAAGGGCCAGAGACGACTGTGTGTACCAAGTGGAGCTGGAGAGGCTGAAGCTGAAGCAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS TCA 72 bp CAGAAGTCTGCGGGTCCAAGGCAAAGCACTGGAGTTTaGTCGGCGTGCGCTGTAACCGGTGCTGATGAAGGA +
Preference number: 6 (lower is better)
Translates to: QKSAGPRQSTGV*SACAVTGADEG
Trigger: TCCTTCATCAGCACCGGTTACAGCGCACGCCGATCAAACTCCAGTGCTTTGCCTTGGACCCGCAGACTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS TCA 72 bp TCGTCTCTGGCCCTTCGGACAGAGTCCTGCAGCTCTTaGAGGTTCCGCTCCCGTTCTAACTGCAGCTCCTTT +
Preference number: 6 (lower is better)
Translates to: SSLALRTESCSS*RFRSRSNCSSF
Trigger: AAAGGAGCTGCAGTTAGAACGGGAGCGGAACCTTCAAGAGCTGCAGGACTCTGTCCGAAGGGCCAGAGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 72 bp CCTCTGGCTGGGCCAGCGAAGCAGGTACAGAACCGATaGCCTTCACAGTGGGCTTTGGATCCTTGTCATACT +
Preference number: 6 (lower is better)
Translates to: PLAGPAKQVQNR*PSQWALDPCHT
Trigger: AGTATGACAAGGATCCAAAGCCCACTGTGAAGGGCATCGGTTCTGTACCTGCTTCGCTGGCCCAGCCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS TCA 72 bp CACTGGCCAGCTGCTGCTCACGGGTCTCTAGCTCCGTaGGGGCCTTCTGAAGTTTGCCTTCTAGAATACTGT +
Preference number: 6 (lower is better)
Translates to: HWPAAAHGSLAP*GPSEVCLLEYC
Trigger: ACAGTATTCTAGAAGGCAAACTTCAGAAGGCCCTCACGGAGCTAGAGACCCGTGAGCAGCAGCTGGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 72 bp GGCTGGTCAGTATGGTCGACAGGATCAGTAGCCAGCTaGTCCCCATCAAACTTTGCTTCCACCACGAGCAGA +
Preference number: 6 (lower is better)
Translates to: GWSVWSTGSVAS*SPSNFASTTSR
Trigger: TCTGCTCGTGGTGGAAGCAAAGTTTGATGGGGAGCAGCTGGCTACTGATCCTGTCGACCATACTGACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 90 bp CCAGCTGCTCCCCATCAAACTTTGCTTCCACCACGAGCAGATGCTTaGGACGTTTGGGGAAATGGCGACCTTCGAGGATGGATACGACGA +
Preference number: 6 (lower is better)
Translates to: PAAPHQTLLPPRADA*DVWGNGDLRGWIRR
Trigger: TCGTCGTATCCATCCTCGAAGGTCGCCATTTCCCCAAACGTCCAAAGCATCTGCTCGTGGTGGAAGCAAAGTTTGATGGGGAGCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 90 bp GGGCCAGCGAAGCAGGTACAGAACCGATGCCCTTCACAGTGGGCTTaGGATCCTTGTCATACTGCAGGCTCTCCACTTCACTTTCTGTTG +
Preference number: 6 (lower is better)
Translates to: GPAKQVQNRCPSQWA*DPCHTAGSPLHFLL
Trigger: CAACAGAAAGTGAAGTGGAGAGCCTGCAGTATGACAAGGATCCAAAGCCCACTGTGAAGGGCATCGGTTCTGTACCTGCTTCGCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 72 bp TGCTCCCCATCAAACTTTGCTTCCACCACGAGCAGATaGTTTGGACGTTTGGGGAAATGGCGACCTTCGAGG +
Preference number: 6 (lower is better)
Translates to: CSPSNFASTTSR*FGRLGKWRPSR
Trigger: CCTCGAAGGTCGCCATTTCCCCAAACGTCCAAAGCATCTGCTCGTGGTGGAAGCAAAGTTTGATGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 72 bp GACAGGATCAGTAGCCAGCTGCTCCCCATCAAACTTTaGTTCCACCACGAGCAGATGCTTTGGACGTTTGGG +
Preference number: 6 (lower is better)
Translates to: DRISSQLLPIKL*FHHEQMLWTFG
Trigger: CCCAAACGTCCAAAGCATCTGCTCGTGGTGGAAGCAAAGTTTGATGGGGAGCAGCTGGCTACTGATCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 72 bp GAAGAGCCAGGTACACACGCAGAATCTCCACACTGCTaGGTATACGAACAGATGCCCTCTCGGGCTCAAAGT +
Preference number: 6 (lower is better)
Translates to: EEPGTHAESPHC*VYEQMPSRAQS
Trigger: ACTTTGAGCCCGAGAGGGCATCTGTTCGTATACGCAGCAGTGTGGAGATTCTGCGTGTGTACCTGGCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 72 bp AATTCAATTAAAGACTGGGAATCGATGCCTTCTCTCTaGAGAGCCACGGACACGCCCACAGTTGGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: NSIKDWESMPSL*RATDTPTVGAR
Trigger: CCTGGCCCCAACTGTGGGCGTGTCCGTGGCTCTGCAGAGAGAAGGCATCGATTCCCAGTCTTTAATTGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp CAGGCTAGCTCAGTAGCAAATTCTGGCTGGTCAGTATaGTCGACAGGATCAGTAGCCAGCTGCTCCCCATCA +
Preference number: 6 (lower is better)
Translates to: QASSVANSGWSV*STGSVASCSPS
Trigger: TGATGGGGAGCAGCTGGCTACTGATCCTGTCGACCATACTGACCAGCCAGAATTTGCTACTGAGCTAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 72 bp CCCCATCAAACTTTGCTTCCACCACGAGCAGATGCTTaGGACGTTTGGGGAAATGGCGACCTTCGAGGATGG +
Preference number: 6 (lower is better)
Translates to: PHQTLLPPRADA*DVWGNGDLRGW
Trigger: CCATCCTCGAAGGTCGCCATTTCCCCAAACGTCCAAAGCATCTGCTCGTGGTGGAAGCAAAGTTTGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp ACTTTGCTTCCACCACGAGCAGATGCTTTGGACGTTTaGGGAAATGGCGACCTTCGAGGATGGATACGACGA +
Preference number: 6 (lower is better)
Translates to: TLLPPRADALDV*GNGDLRGWIRR
Trigger: TCGTCGTATCCATCCTCGAAGGTCGCCATTTCCCCAAACGTCCAAAGCATCTGCTCGTGGTGGAAGCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp CCCATCAAACTTTGCTTCCACCACGAGCAGATGCTTTaGACGTTTGGGGAAATGGCGACCTTCGAGGATGGA +
Preference number: 6 (lower is better)
Translates to: PIKLCFHHEQML*TFGEMATFEDG
Trigger: TCCATCCTCGAAGGTCGCCATTTCCCCAAACGTCCAAAGCATCTGCTCGTGGTGGAAGCAAAGTTTGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp TCAATCTCCCAGGCTAGCTCAGTAGCAAATTCTGGCTaGTCAGTATGGTCGACAGGATCAGTAGCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SISQASSVANSG*SVWSTGSVASC
Trigger: GCAGCTGGCTACTGATCCTGTCGACCATACTGACCAGCCAGAATTTGCTACTGAGCTAGCCTGGGAGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 72 bp AACTTTGCTTCCACCACGAGCAGATGCTTTGGACGTTaGGGGAAATGGCGACCTTCGAGGATGGATACGACG +
Preference number: 6 (lower is better)
Translates to: NFASTTSRCFGR*GKWRPSRMDTT
Trigger: CGTCGTATCCATCCTCGAAGGTCGCCATTTCCCCAAACGTCCAAAGCATCTGCTCGTGGTGGAAGCAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 72 bp AGGCTGATCTGCACCTCGGCCTTGAACTTGGTGTATTaGTTACTCAGCAGCTGGTACCATTTGGGAGCCTGC +
Preference number: 6 (lower is better)
Translates to: RLICTSALNLVY*LLSSWYHLGAC
Trigger: GCAGGCTCCCAAATGGTACCAGCTGCTGAGTAACAAATACACCAAGTTCAAGGCCGAGGTGCAGATCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 72 bp TGCATCTCTTTCCACATCTCCAGCTCGAGGGCAGCCTaGTACTCTAAGGTCTCTCTGGGTTCCATCTGGATC +
Preference number: 6 (lower is better)
Translates to: CISFHISSSRAA*YSKVSLGSIWI
Trigger: GATCCAGATGGAACCCAGAGAGACCTTAGAGTACAAGGCTGCCCTCGAGCTGGAGATGTGGAAAGAGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 90 bp ATGTCTTCCTGCATCTCTTTCCACATCTCCAGCTCGAGGGCAGCCTaGTACTCTAAGGTCTCTCTGGGTTCCATCTGGATCTCAGAAGGG +
Preference number: 6 (lower is better)
Translates to: MSSCISFHISSSRAA*YSKVSLGSIWISEG
Trigger: CCCTTCTGAGATCCAGATGGAACCCAGAGAGACCTTAGAGTACAAGGCTGCCCTCGAGCTGGAGATGTGGAAAGAGATGCAGGAAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 90 bp GAAGCAGGTACAGAACCGATGCCCTTCACAGTGGGCTTTGGATCCTaGTCATACTGCAGGCTCTCCACTTCACTTTCTGTTGCATCATCC +
Preference number: 6 (lower is better)
Translates to: EAGTEPMPFTVGFGS*SYCRLSTSLSVASS
Trigger: GGATGATGCAACAGAAAGTGAAGTGGAGAGCCTGCAGTATGACAAGGATCCAAAGCCCACTGTGAAGGGCATCGGTTCTGTACCTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp CTGCCCAGCTTCCCACTTGCAATCTCTTTGCAGTCCTaGTACTGGTTCTGTTCTTGCTGCCTTAACCTGTTC +
Preference number: 6 (lower is better)
Translates to: LPSFPLAISLQS*YWFCSCCLNLF
Trigger: GAACAGGTTAAGGCAGCAAGAACAGAACCAGTACCAGGACTGCAAAGAGATTGCAAGTGGGAAGCTGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS GCA 72 bp TCCAATCTGATGGTAGCCTCCTTCCTCATTCAATACTaGAACAATGTCCTTCGGGTCAACTCCTGCCAGGCT +
Preference number: 6 (lower is better)
Translates to: SNLMVASFLIQY*NNVLRVNSCQA
Trigger: AGCCTGGCAGGAGTTGACCCGAAGGACATTGTTGCAGTATTGAATGAGGAAGGAGGCTACCATCAGATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 72 bp ACGCAGAATCTCCACACTGCTGCGTATACGAACAGATaGCCTCTCGGGCTCAAAGTTTGGGTTGATCAAATC +
Preference number: 6 (lower is better)
Translates to: TQNLHTAAYTNR*PLGLKVWVDQI
Trigger: GATTTGATCAACCCAAACTTTGAGCCCGAGAGGGCATCTGTTCGTATACGCAGCAGTGTGGAGATTCTGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 72 bp ATGCCCTTCACAGTGGGCTTTGGATCCTTGTCATACTaGAGGCTCTCCACTTCACTTTCTGTTGCATCATCC +
Preference number: 6 (lower is better)
Translates to: MPFTVGFGSLSY*RLSTSLSVASS
Trigger: GGATGATGCAACAGAAAGTGAAGTGGAGAGCCTGCAGTATGACAAGGATCCAAAGCCCACTGTGAAGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp CACCGACAAAATAAAGGGGTCAGTACAGTGCTCCGCTaGTCCAATCTGATGGTAGCCTCCTTCCTCATTCAA +
Preference number: 6 (lower is better)
Translates to: HRQNKGVSTVLR*SNLMVASFLIQ
Trigger: TTGAATGAGGAAGGAGGCTACCATCAGATTGGACCAGCGGAGCACTGTACTGACCCCTTTATTTTGTCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp AGCTTCCCACTTGCAATCTCTTTGCAGTCCTGGTACTaGTTCTGTTCTTGCTGCCTTAACCTGTTCAGCTCG +
Preference number: 6 (lower is better)
Translates to: SFPLAISLQSWY*FCSCCLNLFSS
Trigger: CGAGCTGAACAGGTTAAGGCAGCAAGAACAGAACCAGTACCAGGACTGCAAAGAGATTGCAAGTGGGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000049811.8
CDS CAA 72 bp TCTGTCTCCAAAGTGAGGCTGATCTGCACCTCGGCCTaGAACTTGGTGTATTTGTTACTCAGCAGCTGGTAC +
Preference number: 6 (lower is better)
Translates to: SVSKVRLICTSA*NLVYLLLSSWY
Trigger: GTACCAGCTGCTGAGTAACAAATACACCAAGTTCAAGGCCGAGGTGCAGATCAGCCTCACTTTGGAGACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 72 bp ACAGAACCGATGCCCTTCACAGTGGGCTTTGGATCCTaGTCATACTGCAGGCTCTCCACTTCACTTTCTGTT +
Preference number: 6 (lower is better)
Translates to: TEPMPFTVGFGS*SYCRLSTSLSV
Trigger: AACAGAAAGTGAAGTGGAGAGCCTGCAGTATGACAAGGATCCAAAGCCCACTGTGAAGGGCATCGGTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 90 bp TCCAAAGTGAGGCTGATCTGCACCTCGGCCTTGAACTTGGTGTATTaGTTACTCAGCAGCTGGTACCATTTGGGAGCCTGCTTTGTTTCT +
Preference number: 6 (lower is better)
Translates to: SKVRLICTSALNLVY*LLSSWYHLGACFVS
Trigger: AGAAACAAAGCAGGCTCCCAAATGGTACCAGCTGCTGAGTAACAAATACACCAAGTTCAAGGCCGAGGTGCAGATCAGCCTCACTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 72 bp CCGAACTTCTACGGGAGGGTTAGTCATAATAGGAGCTaGACTGCCGAAGAATGGGTAGGAGTACCTCAATAT +
Preference number: 6 (lower is better)
Translates to: PNFYGRVSHNRS*TAEEWVGVPQY
Trigger: ATATTGAGGTACTCCTACCCATTCTTCGGCAGTGCAGCTCCTATTATGACTAACCCTCCCGTAGAAGTTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp TTCTTAAGTCCAAAACAATGTAGCCTACGGTTTCCTTaGCAGAAGTCTGCGGGTCCAAGGCAAAGCACTGGA +
Preference number: 6 (lower is better)
Translates to: FLSPKQCSLRFP*QKSAGPRQSTG
Trigger: TCCAGTGCTTTGCCTTGGACCCGCAGACTTCTGCCAAGGAAACCGTAGGCTACATTGTTTTGGACTTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 90 bp CTGCTGCGTATACGAACAGATGCCCTCTCGGGCTCAAAGTTTGGGTaGATCAAATCACTGAAAGGCTCGTTTGTAACATCGTTTCCCAGT +
Preference number: 6 (lower is better)
Translates to: LLRIRTDALSGSKFG*IKSLKGSFVTSFPS
Trigger: ACTGGGAAACGATGTTACAAACGAGCCTTTCAGTGATTTGATCAACCCAAACTTTGAGCCCGAGAGGGCATCTGTTCGTATACGCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS GCA 72 bp GGGTCAAGGGTAAAAGCACCTTCTACTGTGACCGGATaGTGGTTAATCTCTGTACTGCCCTTCTTCAGTAAT +
Preference number: 6 (lower is better)
Translates to: GSRVKAPSTVTG*WLISVLPFFSN
Trigger: ATTACTGAAGAAGGGCAGTACAGAGATTAACCAGCATCCGGTCACAGTAGAAGGTGCTTTTACCCTTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 90 bp TGGATTCTTGCGACCCCAAGGAGTAAATCTTTACTCATTTTATCCTaGTGCCATAACTCCACCAGCAGAGGAATCCGTAGGAAGGTGTCT +
Preference number: 6 (lower is better)
Translates to: WILATPRSKSLLILS*CHNSTSRGIRRKVS
Trigger: AGACACCTTCCTACGGATTCCTCTGCTGGTGGAGTTATGGCACAAGGATAAAATGAGTAAAGATTTACTCCTTGGGGTCGCAAGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 90 bp AGTCTTCCAGTGTCATTGTATAAGAAAGGTCTAATATCCTGTTATTaGACCCCTGGGCTGCTATCACAGGCACGCTCTCACTGTACGTCT +
Preference number: 6 (lower is better)
Translates to: SLPVSLYKKGLISCY*TPGLLSQARSHCTS
Trigger: AGACGTACAGTGAGAGCGTGCCTGTGATAGCAGCCCAGGGGTCAAATAACAGGATATTAGACCTTTCTTATACAATGACACTGGAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp TCAAGGGTAAAAGCACCTTCTACTGTGACCGGATGCTaGTTAATCTCTGTACTGCCCTTCTTCAGTAATCCA +
Preference number: 6 (lower is better)
Translates to: SRVKAPSTVTGC*LISVLPFFSNP
Trigger: TGGATTACTGAAGAAGGGCAGTACAGAGATTAACCAGCATCCGGTCACAGTAGAAGGTGCTTTTACCCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp AGGGTTAGTCATAATAGGAGCTGCACTGCCGAAGAATaGGTAGGAGTACCTCAATATGCAGTTGACTGGAAA +
Preference number: 6 (lower is better)
Translates to: RVSHNRSCTAEE*VGVPQYAVDWK
Trigger: TTTCCAGTCAACTGCATATTGAGGTACTCCTACCCATTCTTCGGCAGTGCAGCTCCTATTATGACTAACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 72 bp ATACGAACAGATGCCCTCTCGGGCTCAAAGTTTGGGTaGATCAAATCACTGAAAGGCTCGTTTGTAACATCG +
Preference number: 6 (lower is better)
Translates to: IRTDALSGSKFG*IKSLKGSFVTS
Trigger: CGATGTTACAAACGAGCCTTTCAGTGATTTGATCAACCCAAACTTTGAGCCCGAGAGGGCATCTGTTCGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 72 bp GTGTCATTGTATAAGAAAGGTCTAATATCCTGTTATTaGACCCCTGGGCTGCTATCACAGGCACGCTCTCAC +
Preference number: 6 (lower is better)
Translates to: VSLYKKGLISCY*TPGLLSQARSH
Trigger: GTGAGAGCGTGCCTGTGATAGCAGCCCAGGGGTCAAATAACAGGATATTAGACCTTTCTTATACAATGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS TCA 72 bp AAGTTCAACCTTCTCCAAGGTGAGGAGGTTTATTTCTaGCTGCAGCCGGATTTCTGGTTTGTTGTTCTGTTG +
Preference number: 6 (lower is better)
Translates to: KFNLLQGEEVYF*LQPDFWFVVLL
Trigger: CAACAGAACAACAAACCAGAAATCCGGCTGCAGTCAGAAATAAACCTCCTCACCTTGGAGAAGGTTGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp AATCCATTTAAAGGTATTTCTGTACTGCCAAGTGACTaGTCTCCACAGCAGAGATGGATCTGCAGTTTAGAG +
Preference number: 6 (lower is better)
Translates to: NPFKGISVLPSD*SPQQRWICSLE
Trigger: CTCTAAACTGCAGATCCATCTCTGCTGTGGAGACCAGTCACTTGGCAGTACAGAAATACCTTTAAATGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp AATATGCAGTTGACTGGAAAACTGAGTTCCAAGTCATaGACGCTTCTTAAGTCTACTGAGAAGCAGAAGTGG +
Preference number: 6 (lower is better)
Translates to: NMQLTGKLSSKS*TLLKSTEKQKW
Trigger: CCACTTCTGCTTCTCAGTAGACTTAAGAAGCGTCCATGACTTGGAACTCAGTTTTCCAGTCAACTGCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 72 bp CTCTTCTGCAAGAGCTTGCATGTGAGCCAGTTCTTTTaGCTTCAGCTGACTTTCAAATATGTCTTCCTGCAT +
Preference number: 6 (lower is better)
Translates to: LFCKSLHVSQFF*LQLTFKYVFLH
Trigger: ATGCAGGAAGACATATTTGAAAGTCAGCTGAAGCAAAAAGAACTGGCTCACATGCAAGCTCTTGCAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 90 bp CAAAGATCTCACGCATTTTCACTAGGCCATAGTCTTCCAGTGTCATaGTATAAGAAAGGTCTAATATCCTGTTATTTGACCCCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: QRSHAFSLGHSLPVS*YKKGLISCYLTPGL
Trigger: CAGCCCAGGGGTCAAATAACAGGATATTAGACCTTTCTTATACAATGACACTGGAAGACTATGGCCTAGTGAAAATGCGTGAGATCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CCA 72 bp ACTCTCTTCTGTGAATGTTCTGCCTCATGTCCATTCTaGGTCTTTAATTCAATTAAAGACTGGGAATCGATG +
Preference number: 6 (lower is better)
Translates to: TLFCECSASCPF*VFNSIKDWESM
Trigger: CATCGATTCCCAGTCTTTAATTGAATTAAAGACCCAGAATGGACATGAGGCAGAACATTCACAGAAGAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2
CDS CAA 72 bp CACGCATTTTCACTAGGCCATAGTCTTCCAGTGTCATaGTATAAGAAAGGTCTAATATCCTGTTATTTGACC +
Preference number: 6 (lower is better)
Translates to: HAFSLGHSLPVS*YKKGLISCYLT
Trigger: GGTCAAATAACAGGATATTAGACCTTTCTTATACAATGACACTGGAAGACTATGGCCTAGTGAAAATGCGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000049811.8
ENSMUST00000237062.2