Pregenerated sensors for CENPX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025144Ensembl transcript IDs: ENSMUST00000026137.8, ENSMUST00000055424.13, ENSMUST00000106154.8, ENSMUST00000106155.4
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAAGGCTGCTGGGGGCGGGAGGAGGGCTGTGTCTGGAGGCAGGCTaGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTTGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: ARLLGAGGGLCLEAG*FTFPCTCLARTLGG Trigger: ACCTCCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCCGCCCCCAGCAGCCTTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR GCA 90 bp | GCGGGAGGAGGGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTaGACCTGTCTTGCAAGGACTCTTGGAGGTAACAGCTGCTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: AGGGLCLEAGWFTFP*TCLARTLGGNSCWD Trigger: ATCCCAGCAGCTGTTACCTCCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR GCA 90 bp | AAGAAGGAGGCACTGCCAGCAGCTGGTTTATTTATAATGCAAGGCTaGTGGGGGCGGGAGGAGGGCTGTGTCTGGAGGCAGGCTGGTTCA | + |
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Preference number: 1 (lower is better) Translates to: KKEALPAAGLFIMQG*WGREEGCVWRQAGS Trigger: TGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGCCTCCTTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR TCA 90 bp | CTGCTGGGATCTTCCCATCCTCCTGAAGCTGGAGAGCTCAGGAGTTaGTGCTGGTGTGGATTCACTAGACCTTGCAGGCCACAGGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: LLGSSHPPEAGELRS*CWCGFTRPCRPQEG Trigger: TCCCTCCTGTGGCCTGCAAGGTCTAGTGAATCCACACCAGCATCAACTCCTGAGCTCTCCAGCTTCAGGAGGATGGGAAGATCCCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 |
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| 3UTR CCA 90 bp | TTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGAGGGCTGTGTCTaGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: LFIMQGCWGREEGCV*RQAGSPFPAPVLQG Trigger: TCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR CCA 90 bp | AGCAGCTTTGATGTAGGGTGGCAAGAAGGAGGCACTGCCAGCAGCTaGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGAGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: SSFDVGWQEGGTASS*FIYNARLLGAGGGL Trigger: CAGCCCTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGCCTCCTTCTTGCCACCCTACATCAAAGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR-3UTR TCA 90 bp | GGGCGGGAGGAGGGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTATCTTCCCATCCTCCTaGAGCTGGAGAGCTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GREEGCVWRQAGSPFPAPIFPSS*SWRAQE Trigger: CTCCTGAGCTCTCCAGCTTCAGGAGGATGGGAAGAT...AGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCCGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR CAA 90 bp | GGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTaGCAAGGACTCTTGGAGGTAACAGCTGCTGGGATCTTCCCATCC | + |
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Preference number: 2 (lower is better) Translates to: GCVWRQAGSPFPAPV*QGLLEVTAAGIFPS Trigger: GGATGGGAAGATCCCAGCAGCTGTTACCTCCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCACTGCCAGCAGCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAATCTTCCCATCCTCCTaGAGCTGGAGAGCTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GGTASSWFIYNARLLGAGIFPSS*SWRAQE Trigger: CTCCTGAGCTCTCCAGCTTCAGGAGGATGGGAAGAT...TCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGAGGGCTGTGTCTGGATCTTCCCATCCTCCTaGAGCTGGAGAGCTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: AGLFIMQGCWGREEGCVWIFPSS*SWRAQE Trigger: CTCCTGAGCTCTCCAGCTTCAGGAGGATGGGAAGAT...CCAGACACAGCCCTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGAGGGCTGTGTCTGGGGAGGTAACAGCTGCTaGGATCTTCCCATCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: AGLFIMQGCWGREEGCVWGGNSC*DLPILL Trigger: CAGGAGGATGGGAAGATCCCAGCAGCTGTTACCTCC...CCAGACACAGCCCTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGCACTGCCAGCAGCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGGAGGTAACAGCTGCTaGGATCTTCCCATCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: EALPAAGLFIMQGCWGREGGNSC*DLPILL Trigger: CAGGAGGATGGGAAGATCCCAGCAGCTGTTACCTCC...CTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTTGGAGGGAGAGCTCAGGAGTTaGTGCTGGTGTGGATTCACT | + |
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Preference number: 2 (lower is better) Translates to: WRQAGSPFPAPVLQGLLEGELRS*CWCGFT Trigger: AGTGAATCCACACCAGCATCAACTCCTGAGCTCTCC...CTCCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTTGGAGGGATTCACTAGACCTTaGAGGCCACAGGAGGGAACT | + |
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Preference number: 2 (lower is better) Translates to: WRQAGSPFPAPVLQGLLEGFTRP*RPQEGT Trigger: AGTTCCCTCCTGTGGCCTGCAAGGTCTAGTGAATCC...CTCCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGCACTGCCAGCAGCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGCTTGGAGGTAACAGCTaGTGGGATCTTCCCATCCTC | + |
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Preference number: 2 (lower is better) Translates to: EALPAAGLFIMQGCWGRELGGNS*WDLPIL Trigger: GAGGATGGGAAGATCCCAGCAGCTGTTACCTCCAAG...CTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR-3UTR TCA 90 bp | TGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGAGGGCTGTGTCTGGAGGGAGAGCTCAGGAGTTaGTGCTGGTGTGGATTCACT | + |
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Preference number: 2 (lower is better) Translates to: WFIYNARLLGAGGGLCLEGELRS*CWCGFT Trigger: AGTGAATCCACACCAGCATCAACTCCTGAGCTCTCC...CTCCAGACACAGCCCTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGAGGGCTGTGTCTGGAGGGATTCACTAGACCTTaGAGGCCACAGGAGGGAACT | + |
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Preference number: 2 (lower is better) Translates to: WFIYNARLLGAGGGLCLEGFTRP*RPQEGT Trigger: AGTTCCCTCCTGTGGCCTGCAAGGTCTAGTGAATCC...CTCCAGACACAGCCCTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGAGGGCTGTGTCTGGAGCTTGGAGGTAACAGCTaGTGGGATCTTCCCATCCTC | + |
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Preference number: 2 (lower is better) Translates to: WFIYNARLLGAGGGLCLELGGNS*WDLPIL Trigger: GAGGATGGGAAGATCCCAGCAGCTGTTACCTCCAAG...CTCCAGACACAGCCCTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR-3UTR GCA 90 bp | TGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGAGGGCTGTGTCTGGAGTGGTTCACCTTTCCCTaGACCTGTCTTGCAAGGACT | + |
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Preference number: 2 (lower is better) Translates to: WFIYNARLLGAGGGLCLEWFTFP*TCLART Trigger: AGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCA...CTCCAGACACAGCCCTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR CCA 72 bp | CTGGGGGCGGGAGGAGGGCTGTGTCTGGAGGCAGGCTaGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACT | + |
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Preference number: 3 (lower is better) Translates to: LGAGGGLCLEAG*FTFPCTCLART Trigger: AGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCCGCCCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR-3UTR CAA 90 bp | GGGCGGGAGGAGGGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTTGGAGAGCTCAGGAGTaGATGCTGGTGTGGATTCAC | + |
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Preference number: 3 (lower is better) Translates to: GREEGCVWRQAGSPFPAPWRAQE*MLVWIH Trigger: GTGAATCCACACCAGCATCAACTCCTGAGCTCTCCA...AGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCCGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 |
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| 3UTR GCA 72 bp | GGGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTaGACCTGTCTTGCAAGGACTCTTGGAGGTAACAGC | + |
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Preference number: 3 (lower is better) Translates to: GLCLEAGWFTFP*TCLARTLGGNS Trigger: GCTGTTACCTCCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCACTGCCAGCAGCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGATGGAGAGCTCAGGAGTaGATGCTGGTGTGGATTCAC | + |
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Preference number: 3 (lower is better) Translates to: GGTASSWFIYNARLLGAGWRAQE*MLVWIH Trigger: GTGAATCCACACCAGCATCAACTCCTGAGCTCTCCA...TCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 |
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| 3UTR-3UTR CAA 90 bp | GAGGCACTGCCAGCAGCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGTGGAGAGCTCAGGAGTaGATGCTGGTGTGGATTCAC | + |
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Preference number: 3 (lower is better) Translates to: EALPAAGLFIMQGCWGREWRAQE*MLVWIH Trigger: GTGAATCCACACCAGCATCAACTCCTGAGCTCTCCA...CTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 |
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| CDS-3UTR GCA 90 bp | GGCGGGAGGAGGGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGAACATCCAGGTCTTCTaGCTGGGCCTGCCAGACCCC | + |
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Preference number: 4 (lower is better) Translates to: GGRRAVSGGRLVHLSLHLNIQVF*LGLPDP Trigger: GGGGTCTGGCAGGCCCAGGCAGAAGACCTGGATGTT...CAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| CDS-3UTR GCA 90 bp | GGGAGGAGGGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTCAGCCTCCCTCCCTGTaGCCCACATATTCCCCACCC | + |
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Preference number: 4 (lower is better) Translates to: GRRAVSGGRLVHLSLHLSQPPSL*PTYSPP Trigger: GGGTGGGGAATATGTGGGGCACAGGGAGGGAGGCTG...AGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026137.8 |
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| CDS-3UTR GCA 90 bp | GGCGGGAGGAGGGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGCGCCATGAGCTGCAGTaGATCCCCGCTGACTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: GGRRAVSGGRLVHLSLHLRHELQ*IPADFG Trigger: ACCAAAGTCAGCGGGGATGCACTGCAGCTCATGGCG...CAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| CDS-3UTR TCA 90 bp | GGAGGCACTGCCAGCAGCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGCAGTGCATCCCCGCTaGCTGGAGGGAAGGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GGTASSWFIYNARLLGAGAVHPR*LEGRGR Trigger: CCTCCCCCTTCCCTCCAGTCAGCGGGGATGCACTGC...TCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026137.8 |
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| CDS-3UTR CCA 90 bp | GGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGATCCAGGTCTTCTGCCTaGGCCTGCCAGACCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: GCVWRQAGSPFPAPVLQGSRSSA*ACQTPR Trigger: CCGTGGGGTCTGGCAGGCCCAGGCAGAAGACCTGGA...TCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| CDS-3UTR TCA 90 bp | CTGCTGGGGGCGGGAGGAGGGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCGCATCTGGAATGGCTTaGGAACTGAAAGGTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LLGAGGGLCLEAGWFTFPASGMA*ELKGWW Trigger: CCACCAACCTTTCAGTTCTCAAGCCATTCCAGATGC...GGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCCGCCCCCAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| CDS-3UTR CCA 90 bp | TCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTTGGTGCATCCCCGCTGACTaGAGGGAAGGGGGAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SGGRLVHLSLHLSCKDSWCIPAD*REGGGW Trigger: CCACCCTCCCCCTTCCCTCCAGTCAGCGGGGATGCA...CCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026137.8 |
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| CDS-3UTR CCA 90 bp | TGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTTGGAGTCCAGGTCTTCTGCCTaGGCCTGCCAGACCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: WRQAGSPFPAPVLQGLLESRSSA*ACQTPR Trigger: CCGTGGGGTCTGGCAGGCCCAGGCAGAAGACCTGGA...CTCCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| CDS-3UTR CCA 90 bp | GTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTTCCAGGTCTTCTGCCTaGGCCTGCCAGACCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: VSGGRLVHLSLHLSCKDSSRSSA*ACQTPR Trigger: CCGTGGGGTCTGGCAGGCCCAGGCAGAAGACCTGGA...AGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| CDS-3UTR TCA 90 bp | GGCGGGAGGAGGGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGAGCACTTTCTCCAGCTaGTCCACTTCCACAACATCC | + |
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Preference number: 4 (lower is better) Translates to: GGRRAVSGGRLVHLSLHLSTFSS*STSTTS Trigger: GGATGTTGTGGAAGTGGATCAGCTGGAGAAAGTGCT...CAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| CDS-3UTR TCA 90 bp | GGGCGGGAGGAGGGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTAGCACTTTCTCCAGCTaGTCCACTTCCACAACATCC | + |
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Preference number: 4 (lower is better) Translates to: GREEGCVWRQAGSPFPAPSTFSS*STSTTS Trigger: GGATGTTGTGGAAGTGGATCAGCTGGAGAAAGTGCT...AGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCCGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTTGGAGGAACATCCAGGTCTTCTaGCTGGGCCTGCCAGACCCC | + |
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Preference number: 4 (lower is better) Translates to: GGRLVHLSLHLSCKDSWRNIQVF*LGLPDP Trigger: GGGGTCTGGCAGGCCCAGGCAGAAGACCTGGATGTT...CCTCCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| CDS-3UTR TCA 90 bp | GGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGAAAGTCCAGGAGCAGCTaGGGGAGCACTTTCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GCVWRQAGSPFPAPVLQGKSRSS*GSTFSS Trigger: GCTGGAGAAAGTGCTCCCTCAGCTGCTCCTGGACTT...TCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| CDS-3UTR GCA 90 bp | GGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGATCCCCACCCCACTGGTaGCCCAAACCTTTGGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: GCVWRQAGSPFPAPVLQGSPPHW*PKPLVL Trigger: CAAGACCAAAGGTTTGGGGCACCAGTGGGGTGGGGA...TCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026137.8 |
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| CDS-3UTR GCA 90 bp | TGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTTGGAGAACATCCAGGTCTTCTaGCTGGGCCTGCCAGACCCC | + |
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Preference number: 4 (lower is better) Translates to: WRQAGSPFPAPVLQGLLENIQVF*LGLPDP Trigger: GGGGTCTGGCAGGCCCAGGCAGAAGACCTGGATGTT...CTCCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTTGGAGGCGCCATGAGCTGCAGTaGATCCCCGCTGACTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: GGRLVHLSLHLSCKDSWRRHELQ*IPADFG Trigger: ACCAAAGTCAGCGGGGATGCACTGCAGCTCATGGCG...CCTCCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
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| CDS-3UTR CCA 90 bp | GGAGGCACTGCCAGCAGCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAAGGGAAGGGGGAGGGTaGTGGTGTCATAGGACAGCC | + |
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Preference number: 4 (lower is better) Translates to: GGTASSWFIYNARLLGAGREGGG*WCHRTA Trigger: GGCTGTCCTATGACACCACCACCCTCCCCCTTCCCT...TCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026137.8 |
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| CDS-3UTR TCA 90 bp | TCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTTGGAAGTCCAGGAGCAGCTaGGGGAGCACTTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGGRLVHLSLHLSCKDSWKSRSS*GSTFSS Trigger: GCTGGAGAAAGTGCTCCCTCAGCTGCTCCTGGACTT...CCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR GCA 90 bp | GCACTGCCAGCAGCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGAGCGCCATGAGCTGCAGTaGATCCCCGCTGACTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALPAAGLFIMQGCWGREERHELQ*IPADFG Trigger: ACCAAAGTCAGCGGGGATGCACTGCAGCTCATGGCG...CTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGCACTGCCAGCAGCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGAAGTCCAGGAGCAGCTaGGGGAGCACTTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KEALPAAGLFIMQGCWGRKSRSS*GSTFSS Trigger: GCTGGAGAAAGTGCTCCCTCAGCTGCTCCTGGACTT...CCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGCCTCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR TCA 90 bp | TGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGAGGGCTGTGTCTGGAGAAGTCCAGGAGCAGCTaGGGGAGCACTTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WFIYNARLLGAGGGLCLEKSRSS*GSTFSS Trigger: GCTGGAGAAAGTGCTCCCTCAGCTGCTCCTGGACTT...CTCCAGACACAGCCCTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| 3UTR CAA 72 bp | TGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTaGCAAGGACTCTTGGAGGTAACAGCTGCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: WRQAGSPFPAPV*QGLLEVTAAGI Trigger: GATCCCAGCAGCTGTTACCTCCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR TCA 90 bp | GCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGAGGGCTGTGTCTGGGTTGGTGGTAGTTTGTaGGGTGGAGATGAGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGLFIMQGCWGREEGCVWVGGSL*GGDERE Trigger: CTCCCTCTCATCTCCACCTCACAAACTACCACCAAC...CCAGACACAGCCCTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR TCA 90 bp | TCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTTGGGTTGGTGGTAGTTTGTaGGGTGGAGATGAGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGGRLVHLSLHLSCKDSWVGGSL*GGDERE Trigger: CTCCCTCTCATCTCCACCTCACAAACTACCACCAAC...CCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR GCA 90 bp | GGGAGGAGGGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTTGCAATCCCTGAAGTaGAAATGGAGTAGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRRAVSGGRLVHLSLHLSLQSLK*KWSSLL Trigger: GAGCAGACTACTCCATTTGCACTTCAGGGATTGCAA...AGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| 3UTR CAA 72 bp | GGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTaGGAGGTAACAGCTGCTGGGATCTTCCCATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSPFPAPVLQGL*EVTAAGIFPSS Trigger: GGAGGATGGGAAGATCCCAGCAGCTGTTACCTCCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGCACTGCCAGCAGCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGTTTGTGAGGTGGAGATaGGAGGGAGAATCCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KEALPAAGLFIMQGCWGRFVRWR*EGESRG Trigger: GCCTCTGGATTCTCCCTCTCATCTCCACCTCACAAA...CCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGCCTCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR TCA 90 bp | TGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGAGGGCTGTGTCTGGAGTTTGTGAGGTGGAGATaGGAGGGAGAATCCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WFIYNARLLGAGGGLCLEFVRWR*EGESRG Trigger: GCCTCTGGATTCTCCCTCTCATCTCCACCTCACAAA...CTCCAGACACAGCCCTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGCACTGCCAGCAGCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGAGCACTTTCTCCAGCTaGTCCACTTCCACAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: KEALPAAGLFIMQGCWGRSTFSS*STSTTS Trigger: GGATGTTGTGGAAGTGGATCAGCTGGAGAAAGTGCT...CCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGCCTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR TCA 90 bp | TGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGAGGGCTGTGTCTGGAGAGCACTTTCTCCAGCTaGTCCACTTCCACAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: WFIYNARLLGAGGGLCLESTFSS*STSTTS Trigger: GGATGTTGTGGAAGTGGATCAGCTGGAGAAAGTGCT...CTCCAGACACAGCCCTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR CCA 90 bp | GAGGCACTGCCAGCAGCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGATTGGCCAGGCATCTaGAATGGCTTGAGAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EALPAAGLFIMQGCWGREDWPGI*NGLRTE Trigger: TTCAGTTCTCAAGCCATTCCAGATGCCTGGCCAATC...CTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTTGGAGGATTGGCCAGGCATCTaGAATGGCTTGAGAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WRQAGSPFPAPVLQGLLEDWPGI*NGLRTE Trigger: TTCAGTTCTCAAGCCATTCCAGATGCCTGGCCAATC...CTCCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR GCA 90 bp | TGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTTGCAATCCCTGAAGTaGAAATGGAGTAGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CVWRQAGSPFPAPVLQGLLQSLK*KWSSLL Trigger: GAGCAGACTACTCCATTTGCACTTCAGGGATTGCAA...GAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTTTGCAATCCCTGAAGTaGAAATGGAGTAGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSGGRLVHLSLHLSCKDSLQSLK*KWSSLL Trigger: GAGCAGACTACTCCATTTGCACTTCAGGGATTGCAA...AGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR GCA 90 bp | TGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGAGGGCTGTGTCTGGAGTTGCAATCCCTGAAGTaGAAATGGAGTAGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WFIYNARLLGAGGGLCLELQSLK*KWSSLL Trigger: GAGCAGACTACTCCATTTGCACTTCAGGGATTGCAA...CTCCAGACACAGCCCTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS CCA 90 bp | GATCCTCAGGAACTCCGCCATGAGCTGCAGTGCATCCCCGCTGACTaGAGGGAAGGGGGAGGGTGGTGGTGTCATAGGACAGCCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: DPQELRHELQCIPAD*REGGGWWCHRTASL Trigger: GAGGGAGGCTGTCCTATGACACCACCACCCTCCCCCTTCCCTCCAGTCAGCGGGGATGCACTGCAGCTCATGGCGGAGTTCCTGAGGATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026137.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCTTGGGGTGGTGGCGGCAGATaGGCCAGGCATCTGGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: SGGRLVHLSLHLSCKDSWGGGGR*ARHLEW Trigger: CCATTCCAGATGCCTGGCCAATCTGCCGCCACCACC...CCAAGAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR CAA 90 bp | TGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTTGCAAGGACTCGGTGGTGGCGGCAGATaGGCCAGGCATCTGGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: CVWRQAGSPFPAPVLQGLGGGGR*ARHLEW Trigger: CCATTCCAGATGCCTGGCCAATCTGCCGCCACCACC...GAGTCCTTGCAAGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS-3UTR CAA 90 bp | GGCGGGAGGAGGGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGCCCAAACCTTTGGTCTaGCAATCCCTGAAGTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GGRRAVSGGRLVHLSLHLPKPLV*QSLKCK Trigger: TTTGCACTTCAGGGATTGCAAGACCAAAGGTTTGGG...CAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026137.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAGGGCTGTGTCTGGAGGCAGGCTGGTTCACCTTTCCCTGCACCTGTCTGGCATCTGGAATGGCTaGAGAACTGAAAGGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRRAVSGGRLVHLSLHLSGIWNG*RTERLV Trigger: CACCAACCTTTCAGTTCTCAAGCCATTCCAGATGCC...AGACAGGTGCAGGGAAAGGTGAACCAGCCTGCCTCCAGACACAGCCCTCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS GCA 90 bp | AGCTGCAGTGCATCCCCGCTGACTTTGGTCTTGCAATCCCTGAAGTaGAAATGGAGTAGTCTGCTCACCAGTTCCAGGTGGTGGCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SCSASPLTLVLQSLK*KWSSLLTSSRWWRQ Trigger: CTGCCGCCACCACCTGGAACTGGTGAGCAGACTACTCCATTTGCACTTCAGGGATTGCAAGACCAAAGTCAGCGGGGATGCACTGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS GCA 90 bp | CCACCCCACTGGTGCCCCAAACCTTTGGTCTTGCAATCCCTGAAGTaGAAATGGAGTAGTCTGCTCACCAGTTCCTTCCGGAAGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PPHWCPKPLVLQSLK*KWSSLLTSSFRKPL Trigger: CAGTGGCTTCCGGAAGGAACTGGTGAGCAGACTACTCCATTTGCACTTCAGGGATTGCAAGACCAAAGGTTTGGGGCACCAGTGGGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026137.8 |
||
| CDS CCA 90 bp | AGTGCATCCCCGCTGACTTTGGTCTTGCAATCCCTGAAGTGCAAATaGAGTAGTCTGCTCACCAGTTCCAGGTGGTGGCGGCAGATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SASPLTLVLQSLKCK*SSLLTSSRWWRQIG Trigger: GCCAATCTGCCGCCACCACCTGGAACTGGTGAGCAGACTACTCCATTTGCACTTCAGGGATTGCAAGACCAAAGTCAGCGGGGATGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS GCA 90 bp | AGCTGCAGTGCATCCCCGCTGACTTTGGTCTTGCAATCCCTGAAGTaGAAATGGAGTAGTCTGCTCACCAGTTCCTTCCGGAAGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SCSASPLTLVLQSLK*KWSSLLTSSFRKPL Trigger: CAGTGGCTTCCGGAAGGAACTGGTGAGCAGACTACTCCATTTGCACTTCAGGGATTGCAAGACCAAAGTCAGCGGGGATGCACTGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055424.13 |
||
| CDS CCA 90 bp | CACTGGTGCCCCAAACCTTTGGTCTTGCAATCCCTGAAGTGCAAATaGAGTAGTCTGCTCACCAGTTCCTTCCGGAAGCCACTGTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HWCPKPLVLQSLKCK*SSLLTSSFRKPLFP Trigger: GGGAAACAGTGGCTTCCGGAAGGAACTGGTGAGCAGACTACTCCATTTGCACTTCAGGGATTGCAAGACCAAAGGTTTGGGGCACCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026137.8 |
||
| CDS CCA 90 bp | AGTGCATCCCCGCTGACTTTGGTCTTGCAATCCCTGAAGTGCAAATaGAGTAGTCTGCTCACCAGTTCCTTCCGGAAGCCACTGTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SASPLTLVLQSLKCK*SSLLTSSFRKPLFP Trigger: GGGAAACAGTGGCTTCCGGAAGGAACTGGTGAGCAGACTACTCCATTTGCACTTCAGGGATTGCAAGACCAAAGTCAGCGGGGATGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055424.13 |
||
| CDS-3UTR CAA 90 bp | GCACTGCCAGCAGCTGGTTTATTTATAATGCAAGGCTGCTGGGGGCGGGAGGAGTTGAGAACTGAAAGGTaGGTGGTAGTTTGTGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALPAAGLFIMQGCWGREELRTER*VVVCEV Trigger: CACCTCACAAACTACCACCAACCTTTCAGTTCTCAA...CTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS CCA 72 bp | CAGTGCATCCCCGCTGACTGGAGGGAAGGGGGAGGGTaGTGGTGTCATAGGACAGCCTCCCTCCCTGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QCIPADWREGGG*WCHRTASLPVP Trigger: GGGCACAGGGAGGGAGGCTGTCCTATGACACCACCACCCTCCCCCTTCCCTCCAGTCAGCGGGGATGCACTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026137.8 |
||
| CDS GCA 72 bp | TACGAAGATCCTCAGGAACTCCGCCATGAGCTGCAGTaGATCCCCGCTGACTGGAGGGAAGGGGGAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: YEDPQELRHELQ*IPADWREGGGW Trigger: CCACCCTCCCCCTTCCCTCCAGTCAGCGGGGATGCACTGCAGCTCATGGCGGAGTTCCTGAGGATCTTCGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026137.8 |
||
| CDS CCA 72 bp | GAACTCCGCCATGAGCTGCAGTGCATCCCCGCTGACTaGAGGGAAGGGGGAGGGTGGTGGTGTCATAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: ELRHELQCIPAD*REGGGWWCHRT Trigger: TGTCCTATGACACCACCACCCTCCCCCTTCCCTCCAGTCAGCGGGGATGCACTGCAGCTCATGGCGGAGTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026137.8 |
||
| CDS GCA 72 bp | TCCACTTCCACAACATCCAGGTCTTCTGCCTGGGCCTaGCAGACCCCACGGACAGCAGCCTCTAGTACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: STSTTSRSSAWA*QTPRTAASSTK Trigger: CTTCGTACTAGAGGCTGCTGTCCGTGGGGTCTGGCAGGCCCAGGCAGAAGACCTGGATGTTGTGGAAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026137.8 ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS CCA 72 bp | AAGTGCAAATGGAGTAGTCTGCTCACCAGTTCCAGGTaGTGGCGGCAGATTGGCCAGGCATCTGGAATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KCKWSSLLTSSR*WRQIGQASGMA Trigger: AGCCATTCCAGATGCCTGGCCAATCTGCCGCCACCACCTGGAACTGGTGAGCAGACTACTCCATTTGCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS CCA 72 bp | CCGCTGACTTTGGTCTTGCAATCCCTGAAGTGCAAATaGAGTAGTCTGCTCACCAGTTCCAGGTGGTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PLTLVLQSLKCK*SSLLTSSRWWR Trigger: CCGCCACCACCTGGAACTGGTGAGCAGACTACTCCATTTGCACTTCAGGGATTGCAAGACCAAAGTCAGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS CAA 90 bp | ATCCTCAGGAACTCCGCCATGAGCTGCAGTGCATCCCCGCTGACTTaGGTCTTGCAATCCCTGAAGTGCAAATGGAGTAGTCTGCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: ILRNSAMSCSASPLT*VLQSLKCKWSSLLT Trigger: GGTGAGCAGACTACTCCATTTGCACTTCAGGGATTGCAAGACCAAAGTCAGCGGGGATGCACTGCAGCTCATGGCGGAGTTCCTGAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS GCA 72 bp | GCATCCCCGCTGACTTTGGTCTTGCAATCCCTGAAGTaGAAATGGAGTAGTCTGCTCACCAGTTCCTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ASPLTLVLQSLK*KWSSLLTSSFR Trigger: CCGGAAGGAACTGGTGAGCAGACTACTCCATTTGCACTTCAGGGATTGCAAGACCAAAGTCAGCGGGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055424.13 |
||
| CDS GCA 72 bp | TACGAAGATCCTCAGGAACTCCGCCATGAGCTGCAGTaGATCCCCGCTGACTTTGGTCTTGCAATCCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: YEDPQELRHELQ*IPADFGLAIPE Trigger: TTCAGGGATTGCAAGACCAAAGTCAGCGGGGATGCACTGCAGCTCATGGCGGAGTTCCTGAGGATCTTCGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055424.13 ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS GCA 72 bp | GCATCCCCGCTGACTTTGGTCTTGCAATCCCTGAAGTaGAAATGGAGTAGTCTGCTCACCAGTTCCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ASPLTLVLQSLK*KWSSLLTSSRW Trigger: CCACCTGGAACTGGTGAGCAGACTACTCCATTTGCACTTCAGGGATTGCAAGACCAAAGTCAGCGGGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS CCA 72 bp | CAGTTCCAGGTGGTGGCGGCAGATTGGCCAGGCATCTaGAATGGCTTGAGAACTGAAAGGTTGGTGGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: QFQVVAADWPGI*NGLRTERLVVV Trigger: AACTACCACCAACCTTTCAGTTCTCAAGCCATTCCAGATGCCTGGCCAATCTGCCGCCACCACCTGGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106154.8 ENSMUST00000106155.4 |
||
| CDS GCA 72 bp | TGGTGCCCCAAACCTTTGGTCTTGCAATCCCTGAAGTaGAAATGGAGTAGTCTGCTCACCAGTTCCTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: WCPKPLVLQSLK*KWSSLLTSSFR Trigger: CCGGAAGGAACTGGTGAGCAGACTACTCCATTTGCACTTCAGGGATTGCAAGACCAAAGGTTTGGGGCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026137.8 |
||
| CDS CCA 72 bp | CCGCTGACTTTGGTCTTGCAATCCCTGAAGTGCAAATaGAGTAGTCTGCTCACCAGTTCCTTCCGGAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PLTLVLQSLKCK*SSLLTSSFRKP Trigger: TGGCTTCCGGAAGGAACTGGTGAGCAGACTACTCCATTTGCACTTCAGGGATTGCAAGACCAAAGTCAGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055424.13 |
||