Pregenerated sensors for CENPU (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031629Ensembl transcript IDs: ENSMUST00000034045.15, ENSMUST00000122838.2, ENSMUST00000135432.8, ENSMUST00000153908.2, ENSMUST00000210368.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGCCTCTCACTGGGCTGGTGTTCAGTTGGGAGGCTTGGCTGGATaGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCCTAGCACT | + |
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Preference number: 1 (lower is better) Translates to: AASHWAGVQLGGLAG*LPSSREPCLHLPST Trigger: AGTGCTAGGGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAGCCAAGCCTCCCAACTGAACACCAGCCCAGTGAGAGGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR CCA 90 bp | TTTGAGATGCAGCCTCTCACTGGGCTGGTGTTCAGTTGGGAGGCTTaGCTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCC | + |
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Preference number: 1 (lower is better) Translates to: FEMQPLTGLVFSWEA*LDGYQAPGSHVSTS Trigger: GGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAGCCAAGCCTCCCAACTGAACACCAGCCCAGTGAGAGGCTGCATCTCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR CCA 90 bp | GCTTCATCTTCAGAAGGGTCCAAGTTTCTGCTCGCCTTCCCTCTGTaGGTGGCCAGGGAACTGGAGGACACACAGTGTTTGGACAGCTCG | + |
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Preference number: 1 (lower is better) Translates to: ASSSEGSKFLLAFPL*VARELEDTQCLDSS Trigger: CGAGCTGTCCAAACACTGTGTGTCCTCCAGTTCCCTGGCCACCCACAGAGGGAAGGCGAGCAGAAACTTGGACCCTTCTGAAGATGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| 3UTR CCA 90 bp | CATCTTCAGAAGGGTCCAAGTTTCTGCTCGCCTTCCCTCTGTGGGTaGCCAGGGAACTGGAGGACACACAGTGTTTGGACAGCTCGTCTT | + |
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Preference number: 1 (lower is better) Translates to: HLQKGPSFCSPSLCG*PGNWRTHSVWTARL Trigger: AAGACGAGCTGTCCAAACACTGTGTGTCCTCCAGTTCCCTGGCCACCCACAGAGGGAAGGCGAGCAGAAACTTGGACCCTTCTGAAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| 3UTR GCA 90 bp | AGGAGACGGCCGCACTTTCTTCTGAGTTTTCAGCTGACTTTGGGTTaGTGGTGTCTCGTCTACAGGAGAGAGCTGAGCGCTGTGGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: RRRPHFLLSFQLTLG*WCLVYRRELSAVES Trigger: AGACTCCACAGCGCTCAGCTCTCTCCTGTAGACGAGACACCAGCAACCCAAAGTCAGCTGAAAACTCAGAAGAAAGTGCGGCCGTCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122838.2 ENSMUST00000135432.8 |
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| 3UTR GCA 90 bp | ACTCTTTGCCTGTGTCTGTGTGTCCGCGCCTTGGTCTCTTCCTCCTaGCAGGAGACGGCCGCACTTTCTTCTGAGTTTTCAGCTGACTTT | + |
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Preference number: 1 (lower is better) Translates to: TLCLCLCVRALVSSS*QETAALSSEFSADF Trigger: AAAGTCAGCTGAAAACTCAGAAGAAAGTGCGGCCGTCTCCTGGCAGGAGGAAGAGACCAAGGCGCGGACACACAGACACAGGCAAAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122838.2 |
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| 3UTR GCA 90 bp | CAGAACCATCTGTGTCTGTGTGTCCGCGCCTTGGTCTCTTCCTCCTaGCAGGAGACGGCCGCACTTTCTTCTGAGTTTTCAGCTGACTTT | + |
|
Preference number: 1 (lower is better) Translates to: QNHLCLCVRALVSSS*QETAALSSEFSADF Trigger: AAAGTCAGCTGAAAACTCAGAAGAAAGTGCGGCCGTCTCCTGGCAGGAGGAAGAGACCAAGGCGCGGACACACAGACACAGATGGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| 3UTR CCA 90 bp | AGACGGCCGCACTTTCTTCTGAGTTTTCAGCTGACTTTGGGTTGCTaGTGTCTCGTCTACAGGAGAGAGCTGAGCGCTGTGGAGTCTTGT | + |
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Preference number: 1 (lower is better) Translates to: RRPHFLLSFQLTLGC*CLVYRRELSAVESC Trigger: ACAAGACTCCACAGCGCTCAGCTCTCTCCTGTAGACGAGACACCAGCAACCCAAAGTCAGCTGAAAACTCAGAAGAAAGTGCGGCCGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122838.2 ENSMUST00000135432.8 |
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| 3UTR CCA 90 bp | GATATGCATACTTTCAGAACCATCTGTGTCTGTGTGTCCGCGCCTTaGTCTCTTCCTCCTGCCAGGAGACGGCCGCACTTTCTTCTGAGT | + |
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Preference number: 1 (lower is better) Translates to: DMHTFRTICVCVSAP*SLPPARRRPHFLLS Trigger: ACTCAGAAGAAAGTGCGGCCGTCTCCTGGCAGGAGGAAGAGACCAAGGCGCGGACACACAGACACAGATGGTTCTGAAAGTATGCATATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| 3UTR TCA 90 bp | TCTTCCCTCCAAAATAAAGGAAGACTTCACTTCTGGAGAAACAGATaGCACCAGCACCTCACTGACCAAGGATTCTCAAACCCCGCCATC | + |
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Preference number: 1 (lower is better) Translates to: SSLQNKGRLHFWRNR*HQHLTDQGFSNPAI Trigger: GATGGCGGGGTTTGAGAATCCTTGGTCAGTGAGGTGCTGGTGTCATCTGTTTCTCCAGAAGTGAAGTCTTCCTTTATTTTGGAGGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR GCA 90 bp | GAAACTTCCCTTTGCTGTACCCCTTCTGAGGAGTTGAAATGTATCTaGCATGAGCTACAGTCAGTTTCAGCCTCAGAGAAGCATGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: ETSLCCTPSEELKCI*HELQSVSASEKHVC Trigger: GCAGACATGCTTCTCTGAGGCTGAAACTGACTGTAGCTCATGGCAGATACATTTCAACTCCTCAGAAGGGGTACAGCAAAGGGAAGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGGATTCTCAAACCCCGCCATCCTGCAACTTGTCAGCCGGCGGGCTTTCTTGGCCTCTCAGGGGGTaGCGGTGCTGCAGGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: TKDSQTPPSCNLSAGGLSWPLRG*RCCRSS Trigger: GCTGCTCCTGCAGCACCGTCACCCCCTGAGAGGCCA...AGAAAGCCCGCCGGCTGACAAGTTGCAGGATGGCGGGGTTTGAGAATCCTTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| 3UTR-3UTR GCA 90 bp | CTGACCAAGGATTCTCAAACCCCGCCATCCTGCAACTTGTCAGCCGGCGGGCTTGTCACCACAGGCCGCTaGTGTCAGGAGCATGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LTKDSQTPPSCNLSAGGLVTTGR*CQEHGF Trigger: GAAGCCATGCTCCTGACAGCAGCGGCCTGTGGTGAC...AAGCCCGCCGGCTGACAAGTTGCAGGATGGCGGGGTTTGAGAATCCTTGGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGTGGAGTCTTGTCCTCCTGGGAGTGACCGGCTCGGCTGGCCTCTCAGGGGGAGACTCATTTCCACTTaGTTCATCTTCAGAAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: AVESCPPGSDRLGWPLRGRLIST*FIFRRV Trigger: GACCCTTCTGAAGATGAAGCAAGTGGAAATGAGTCT...CCCCCTGAGAGGCCAGCCGAGCCGGTCACTCCCAGGAGGACAAGACTCCACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCCTAGCACTGGGAAGCAGGCAGCCAGCATaGTCACTGACTGCTGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: LDGYQAPGSHVSTSLALGSRQPA*SLTAEN Trigger: GTTTTCAGCAGTCAGTGACCATGCTGGCTGCCTGCT...TCCCAGTGCTAGGGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR CAA 90 bp | CCTGCCAGGAGACGGCCGCACTTTCTTCTGAGTTTTCAGCTGACTTaGGGTTGCTGGTGTCTCGTCTACAGGAGAGAGCTGAGCGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: PARRRPHFLLSFQLT*GCWCLVYRRELSAV Trigger: CACAGCGCTCAGCTCTCTCCTGTAGACGAGACACCAGCAACCCAAAGTCAGCTGAAAACTCAGAAGAAAGTGCGGCCGTCTCCTGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122838.2 ENSMUST00000135432.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCCTAGCACTGGGATTCTGGAGAAACAGATaGCACCAGCACCTCACTGAC | + |
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Preference number: 2 (lower is better) Translates to: LDGYQAPGSHVSTSLALGFWRNR*HQHLTD Trigger: GTCAGTGAGGTGCTGGTGTCATCTGTTTCTCCAGAA...TCCCAGTGCTAGGGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR CAA 90 bp | CAGGAGACGGCCGCACTTTCTTCTGAGTTTTCAGCTGACTTTGGGTaGCTGGTGTCTCGTCTACAGGAGAGAGCTGAGCGCTGTGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: QETAALSSEFSADFG*LVSRLQERAERCGV Trigger: GACTCCACAGCGCTCAGCTCTCTCCTGTAGACGAGACACCAGCAACCCAAAGTCAGCTGAAAACTCAGAAGAAAGTGCGGCCGTCTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122838.2 ENSMUST00000135432.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTCCTCCTGCCAGGAGACGGCCGCACTTTCTTCTGAGTTTTCAGCTGACTAGCCTGGCGTTGCTGTaGCCTTGGTCCTTCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: SLPPARRRPHFLLSFQLTSLALL*PWSFCR Trigger: TCTGCAGAAGGACCAAGGTCACAGCAACGCCAGGCT...AGTCAGCTGAAAACTCAGAAGAAAGTGCGGCCGTCTCCTGGCAGGAGGAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122838.2 ENSMUST00000135432.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTGGCTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCCTAGCATGCTCCCGGTATGCTTaGGGCATCAGAATTATTAGA | + |
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Preference number: 2 (lower is better) Translates to: AWLDGYQAPGSHVSTSLACSRYA*GIRIIR Trigger: TCTAATAATTCTGATGCCTCAAGCATACCGGGAGCA...TGCTAGGGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAGCCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTGCTCATGTACACACGCACACAGGCCAGAGGGACAACTTTGGGTGTCATTCCCTCCTTACATCATCTaGAGAGCTGTCCGACTCGCC | + |
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Preference number: 2 (lower is better) Translates to: VCSCTHAHRPEGQLWVSFPPYII*RAVRLA Trigger: GGCGAGTCGGACAGCTCTGCAGATGATGTAAGGAGG...GAATGACACCCAAAGTTGTCCCTCTGGCCTGTGTGCGTGTGTACATGAGCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGAGTTTTCAGCTGACTTTGGGTTGCTGGTGTCTCGTCTACAGGAGAGAGGCTGCAGGAGCAGCCTaGCGTTGCTGTGACCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: LLSFQLTLGCWCLVYRREAAGAA*RCCDLG Trigger: ACCAAGGTCACAGCAACGCCAGGCTGCTCCTGCAGC...CTCTCTCCTGTAGACGAGACACCAGCAACCCAAAGTCAGCTGAAAACTCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122838.2 ENSMUST00000135432.8 |
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| 3UTR CAA 90 bp | AGATATGCATACTTTCAGAACCATCTGTGTCTGTGTGTCCGCGCCTaGGTCTCTTCCTCCTGCCAGGAGACGGCCGCACTTTCTTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RYAYFQNHLCLCVRA*VSSSCQETAALSSE Trigger: CTCAGAAGAAAGTGCGGCCGTCTCCTGGCAGGAGGAAGAGACCAAGGCGCGGACACACAGACACAGATGGTTCTGAAAGTATGCATATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGGCTTGGCTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCATTGAAGACTACCTTTaGCATATTTCAGCAGACGCT | + |
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Preference number: 2 (lower is better) Translates to: WEAWLDGYQAPGSHVSTSIEDYL*HISADA Trigger: AGCGTCTGCTGAAATATGTCAAAGGTAGTCTTCAAT...GGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAGCCAAGCCTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTGGCTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCCTAGCAATGGTCACTGACTGCTaGAAACCTGGTTATTATTTC | + |
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Preference number: 2 (lower is better) Translates to: AWLDGYQAPGSHVSTSLAMVTDC*KPGYYF Trigger: GAAATAATAACCAGGTTTTCAGCAGTCAGTGACCAT...TGCTAGGGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAGCCAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGAAGACTTCACTTCTGGAGAAACAGATGACACCAGCACCTCACTGACCAAGTTGGTCTCTTCCTCCTaGCAGGAGACGGCCGCACTT | + |
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Preference number: 2 (lower is better) Translates to: KEDFTSGETDDTSTSLTKLVSSS*QETAAL Trigger: AAGTGCGGCCGTCTCCTGGCAGGAGGAAGAGACCAA...CTTGGTCAGTGAGGTGCTGGTGTCATCTGTTTCTCCAGAAGTGAAGTCTTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCCGCTGCTGTCAGGAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGAGAGCCTTGGTTCAATaGATGATATTCCTGATGAAC | + |
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Preference number: 2 (lower is better) Translates to: TGRCCQEHGFRSRKGSRRRALVQ*MIFLMN Trigger: GTTCATCAGGAATATCATCCATTGAACCAAGGCTCT...CCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCCTGACAGCAGCGGCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGATGCTGAATTTGCTGACGCTGCAGATAAGAGCCTTGGTTCAATGGATGGGGCTGGTGTTCAGTTaGGAGGCTTGGCTGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: QKMLNLLTLQIRALVQWMGLVFS*EAWLDG Trigger: GCCATCCAGCCAAGCCTCCCAACTGAACACCAGCCC...CATCCATTGAACCAAGGCTCTTATCTGCAGCGTCAGCAAATTCAGCATCTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGATGCTGAATTTGCTGACGCTGCAGATAAGAGCCTTGGTTCAATGGATCTCGCCTTCCCTCTGTaGGTGGCCAGGGAACTGGAG | + |
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Preference number: 2 (lower is better) Translates to: TEDAEFADAADKSLGSMDLAFPL*VARELE Trigger: CTCCAGTTCCCTGGCCACCCACAGAGGGAAGGCGAG...ATCCATTGAACCAAGGCTCTTATCTGCAGCGTCAGCAAATTCAGCATCTTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| 3UTR-3UTR TCA 90 bp | CACCTCCCTAGCACTGGGATTGCATGCTGGCTTTTTAACATAGATTCTAGGCATAGCCTGGCGTTGCTGTaGCCTTGGTCCTTCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: HLPSTGIACWLFNIDSRHSLALL*PWSFCR Trigger: TCTGCAGAAGGACCAAGGTCACAGCAACGCCAGGCT...ATGCCTAGAATCTATGTTAAAAAGCCAGCATGCAATCCCAGTGCTAGGGAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTGGCTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCCTAGCAGGATCATTCTATGCTTaGATTTGCACTGACATCATT | + |
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Preference number: 2 (lower is better) Translates to: AWLDGYQAPGSHVSTSLAGSFYA*ICTDII Trigger: AATGATGTCAGTGCAAATGCAAGCATAGAATGATCC...TGCTAGGGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAGCCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTTCCTCGAGTGCTCCCGGTATGCTTGAGGCATCAGAATTATTAGAAAAGGCTGCAGGAGCAGCCTaGCGTTGCTGTGACCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: SSSSSAPGMLEASELLEKAAGAA*RCCDLG Trigger: ACCAAGGTCACAGCAACGCCAGGCTGCTCCTGCAGC...CTTTTCTAATAATTCTGATGCCTCAAGCATACCGGGAGCACTCGAGGAAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTGCTCATGTACACACGCACACAGGCCAGAGGGACAACTTTGGGTGTCATTCAGGCTACAATTTGCCTaGAGCCTGAGATTTGATAAC | + |
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Preference number: 2 (lower is better) Translates to: VCSCTHAHRPEGQLWVSFRLQFA*SLRFDN Trigger: GTTATCAAATCTCAGGCTTCAGGCAAATTGTAGCCT...GAATGACACCCAAAGTTGTCCCTCTGGCCTGTGTGCGTGTGTACATGAGCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGATGCTGAATTTGCTGACGCTGCAGATAAGAGCCTTGGTTCAATGGATGCCCCTTCTGAGGAGTTaGAATGTATCTGCCATGAGC | + |
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Preference number: 2 (lower is better) Translates to: QKMLNLLTLQIRALVQWMPLLRS*NVSAMS Trigger: GCTCATGGCAGATACATTTCAACTCCTCAGAAGGGG...CATCCATTGAACCAAGGCTCTTATCTGCAGCGTCAGCAAATTCAGCATCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTCCCTTTGCTGTACCCCTTCTGAGGAGTTGAAATGTATCTGCCATGAGCTATTGCTGTACCCCTTCTaGGGAGTTGAAATGTATCTG | + |
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Preference number: 2 (lower is better) Translates to: TSLCCTPSEELKCICHELLLYPF*GVEMYL Trigger: CAGATACATTTCAACTCCTCAGAAGGGGTACAGCAA...TAGCTCATGGCAGATACATTTCAACTCCTCAGAAGGGGTACAGCAAAGGGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCGTTTCCAGTCATGGATAGGGAGACGTAAAACACTGACCGAAGGTTTCGTATGCTCCCGGTATGCTTaGGGCATCAGAATTATTAGA | + |
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Preference number: 2 (lower is better) Translates to: CRFQSWIGRRKTLTEGFVCSRYA*GIRIIR Trigger: TCTAATAATTCTGATGCCTCAAGCATACCGGGAGCA...TACGAAACCTTCGGTCAGTGTTTTACGTCTCCCTATCCATGACTGGAAACGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153908.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGATGCTGAATTTGCTGACGCTGCAGATAAGAGCCTTGGTTCAATGGATGAGGGCTTTTAACATCTaGGCTTCTTTAAGCATTCTG | + |
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Preference number: 2 (lower is better) Translates to: QKMLNLLTLQIRALVQWMRAFNI*ASLSIL Trigger: CAGAATGCTTAAAGAAGCCCAGATGTTAAAAGCCCT...CATCCATTGAACCAAGGCTCTTATCTGCAGCGTCAGCAAATTCAGCATCTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| 3UTR-3UTR TCA 90 bp | CACCTCCCTAGCACTGGGATTGCATGCTGGCTTTTTAACATAGATTCTAGGCATTATGGCTATGCCTTCTaGGTTATTAGACAACTGAAT | + |
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Preference number: 2 (lower is better) Translates to: HLPSTGIACWLFNIDSRHYGYAF*VIRQLN Trigger: ATTCAGTTGTCTAATAACTCAGAAGGCATAGCCATA...ATGCCTAGAATCTATGTTAAAAAGCCAGCATGCAATCCCAGTGCTAGGGAGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR-3UTR GCA 90 bp | CACCTCCCTAGCACTGGGATTGCATGCTGGCTTTTTAACATAGATTCTAGGCATACTTCAATTAAACGCTaGCTTTTCTTTTCCATGTTG | + |
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Preference number: 2 (lower is better) Translates to: HLPSTGIACWLFNIDSRHTSIKR*LFFSML Trigger: CAACATGGAAAAGAAAAGGCAGCGTTTAATTGAAGT...ATGCCTAGAATCTATGTTAAAAAGCCAGCATGCAATCCCAGTGCTAGGGAGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTGGTTCAATGGATGATATTCCTGATGAACTAATTATAGAAGCTTTACAGTATGGCTATGCCTTCTaGGTTATTAGACAACTGAAT | + |
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Preference number: 2 (lower is better) Translates to: SLGSMDDIPDELIIEALQYGYAF*VIRQLN Trigger: ATTCAGTTGTCTAATAACTCAGAAGGCATAGCCATA...CTGTAAAGCTTCTATAATTAGTTCATCAGGAATATCATCCATTGAACCAAGGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR TCA 72 bp | AGAGCTGAGCGCTGTGGAGTCTTGTCCTCCTGGGAGTaGCCGGCTCGGCTGGCCTCTCAGGGGGTGACGGTG | + |
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Preference number: 3 (lower is better) Translates to: RAERCGVLSSWE*PARLASQGVTV Trigger: CACCGTCACCCCCTGAGAGGCCAGCCGAGCCGGTCACTCCCAGGAGGACAAGACTCCACAGCGCTCAGCTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122838.2 ENSMUST00000135432.8 |
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| 3UTR CCA 72 bp | GGCCTCTCAGGGGGTGACGGTGCTGCAGGAGCAGCCTaGCGTTGCTGTGACCTTGGTCCTTCTGCAGATGCC | + |
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Preference number: 3 (lower is better) Translates to: GLSGGDGAAGAA*RCCDLGPSADA Trigger: GGCATCTGCAGAAGGACCAAGGTCACAGCAACGCCAGGCTGCTCCTGCAGCACCGTCACCCCCTGAGAGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122838.2 ENSMUST00000135432.8 |
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| 3UTR GCA 72 bp | TCAGGGGGTGACGGTGCTGCAGGAGCAGCCTGGCGTTaGTGTGACCTTGGTCCTTCTGCAGATGCCACCCTC | + |
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Preference number: 3 (lower is better) Translates to: SGGDGAAGAAWR*CDLGPSADATL Trigger: GAGGGTGGCATCTGCAGAAGGACCAAGGTCACAGCAACGCCAGGCTGCTCCTGCAGCACCGTCACCCCCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122838.2 ENSMUST00000135432.8 |
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| 3UTR CCA 72 bp | CACTGGGCTGGTGTTCAGTTGGGAGGCTTGGCTGGATaGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTC | + |
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Preference number: 3 (lower is better) Translates to: HWAGVQLGGLAG*LPSSREPCLHL Trigger: GAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAGCCAAGCCTCCCAACTGAACACCAGCCCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| 3UTR GCA 72 bp | TCCTTCTGCAGATGCCACCCTCCTCCTTACATCATCTaGAGAGCTGTCCGACTCGCCGCTGATGGGCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SFCRCHPPPYII*RAVRLAADGLQ Trigger: CTGGAGCCCATCAGCGGCGAGTCGGACAGCTCTGCAGATGATGTAAGGAGGAGGGTGGCATCTGCAGAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCCTAGCACTGGGAAGCAAGGGCTCTCTCTaGAGCTACATTCCCAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LDGYQAPGSHVSTSLALGSKGSL*SYIPSH Trigger: ATGGCTGGGAATGTAGCTCAAGAGAGAGCCCTTGCT...TCCCAGTGCTAGGGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAAACAGATGACACCAGCACCTCACTGACCAAGGATTCTCAAACCCCGCCACTGTGTGTCCGCGCCTaGGTCTCTTCCTCCTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GETDDTSTSLTKDSQTPPLCVRA*VSSSCQ Trigger: CTGGCAGGAGGAAGAGACCAAGGCGCGGACACACAG...TGGCGGGGTTTGAGAATCCTTGGTCAGTGAGGTGCTGGTGTCATCTGTTTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
||
| 3UTR TCA 72 bp | CTTTGGGTTGCTGGTGTCTCGTCTACAGGAGAGAGCTaGGCGCTGTGGAGTCTTGTCCTCCTGGGAGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: LWVAGVSSTGES*ALWSLVLLGVT Trigger: GGTCACTCCCAGGAGGACAAGACTCCACAGCGCTCAGCTCTCTCCTGTAGACGAGACACCAGCAACCCAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122838.2 ENSMUST00000135432.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAGGATTCTCAAACCCCGCCATCCTGCAACTTGTCAGCCGGCGGGCTTTCTAAGTCAAACACATCCTaGGGCCGGGGCTTTGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: TKDSQTPPSCNLSAGGLSKSNTS*GRGFGP Trigger: TGGTCCAAAGCCCCGGCCCAAGGATGTGTTTGACTT...AGAAAGCCCGCCGGCTGACAAGTTGCAGGATGGCGGGGTTTGAGAATCCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
||
| 3UTR GCA 72 bp | CTGTGTCTGTGTGTCCGCGCCTTGGTCTCTTCCTCCTaGCAGGAGACGGCCGCACTTTCTTCTGAGTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LCLCVRALVSSS*QETAALSSEFS Trigger: TGAAAACTCAGAAGAAAGTGCGGCCGTCTCCTGGCAGGAGGAAGAGACCAAGGCGCGGACACACAGACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122838.2 ENSMUST00000135432.8 |
||
| 3UTR CCA 72 bp | AAGGGTCCAAGTTTCTGCTCGCCTTCCCTCTGTGGGTaGCCAGGGAACTGGAGGACACACAGTGTTTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: KGPSFCSPSLCG*PGNWRTHSVWT Trigger: TGTCCAAACACTGTGTGTCCTCCAGTTCCCTGGCCACCCACAGAGGGAAGGCGAGCAGAAACTTGGACCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
||
| 3UTR CCA 72 bp | TCAGAAGGGTCCAAGTTTCTGCTCGCCTTCCCTCTGTaGGTGGCCAGGGAACTGGAGGACACACAGTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SEGSKFLLAFPL*VARELEDTQCL Trigger: CAAACACTGTGTGTCCTCCAGTTCCCTGGCCACCCACAGAGGGAAGGCGAGCAGAAACTTGGACCCTTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
||
| 3UTR CCA 72 bp | ACTTTCAGAACCATCTGTGTCTGTGTGTCCGCGCCTTaGTCTCTTCCTCCTGCCAGGAGACGGCCGCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: TFRTICVCVSAP*SLPPARRRPHF Trigger: AAAGTGCGGCCGTCTCCTGGCAGGAGGAAGAGACCAAGGCGCGGACACACAGACACAGATGGTTCTGAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
||
| 3UTR GCA 72 bp | CCGCACTTTCTTCTGAGTTTTCAGCTGACTTTGGGTTaGTGGTGTCTCGTCTACAGGAGAGAGCTGAGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: PHFLLSFQLTLG*WCLVYRRELSA Trigger: AGCGCTCAGCTCTCTCCTGTAGACGAGACACCAGCAACCCAAAGTCAGCTGAAAACTCAGAAGAAAGTGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122838.2 ENSMUST00000135432.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTCAAACCCCGCCATCCTGCAACTTGTCAGCCGGCGGGCTTTCTGCCGCTGGAGCAGTGTTTGGTTTaGGATAGAATTGAACTTATC | + |
|
Preference number: 3 (lower is better) Translates to: ILKPRHPATCQPAGFLPLEQCLV*DRIELI Trigger: GATAAGTTCAATTCTATCCAAAACCAAACACTGCTC...CAGCGGCAGAAAGCCCGCCGGCTGACAAGTTGCAGGATGGCGGGGTTTGAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
||
| 3UTR TCA 72 bp | TCACTTCTGGAGAAACAGATGACACCAGCACCTCACTaGCCAAGGATTCTCAAACCCCGCCATCCTGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: SLLEKQMTPAPH*PRILKPRHPAT Trigger: AGTTGCAGGATGGCGGGGTTTGAGAATCCTTGGTCAGTGAGGTGCTGGTGTCATCTGTTTCTCCAGAAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
||
| 3UTR CCA 72 bp | CACTTTCTTCTGAGTTTTCAGCTGACTTTGGGTTGCTaGTGTCTCGTCTACAGGAGAGAGCTGAGCGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HFLLSFQLTLGC*CLVYRRELSAV Trigger: CACAGCGCTCAGCTCTCTCCTGTAGACGAGACACCAGCAACCCAAAGTCAGCTGAAAACTCAGAAGAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122838.2 ENSMUST00000135432.8 |
||
| 3UTR CCA 72 bp | CCCATGCTGACTGTTCCTGACAGCAGGCAGCCAGCATaGTCACTGACTGCTGAAAACCTGGTTATTATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PMLTVPDSRQPA*SLTAENLVIIS Trigger: TGAAATAATAACCAGGTTTTCAGCAGTCAGTGACCATGCTGGCTGCCTGCTGTCAGGAACAGTCAGCATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAGGATTCTCAAACCCCGCCATCCTGCAACTTGTCAGCCGGCGGGCTTTCTCCTAAGCCAGATTTATaGAAGACTACCTTTGACATA | + |
|
Preference number: 3 (lower is better) Translates to: TKDSQTPPSCNLSAGGLSPKPDL*KTTFDI Trigger: TATGTCAAAGGTAGTCTTCAATAAATCTGGCTTAGG...AGAAAGCCCGCCGGCTGACAAGTTGCAGGATGGCGGGGTTTGAGAATCCTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
||
| 3UTR CCA 72 bp | ATTAGAAAAGTCAAACACATCCTTGGGCCGGGGCTTTaGACCAGCTTTCTAAATCCTCGATATAGAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: IRKVKHILGPGL*TSFLNPRYRGS Trigger: GCTTCCTCTATATCGAGGATTTAGAAAGCTGGTCCAAAGCCCCGGCCCAAGGATGTGTTTGACTTTTCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135432.8 ENSMUST00000153908.2 |
||
| 3UTR TCA 72 bp | TCTAGAAACACGAGTATAGAAATAGTACCTTCCAAGTaGACTGTTAACACTGCCATTTCTCCTTCATCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SRNTSIEIVPSK*TVNTAISPSSS Trigger: GGAAGATGAAGGAGAAATGGCAGTGTTAACAGTTCACTTGGAAGGTACTATTTCTATACTCGTGTTTCTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
||
| 3UTR CCA 72 bp | ATCTTGGTGTTCTTCATTTTCAGGGCTTTTAACATCTaGGCTTCTTTAAGCATTCTGATGAGTTCTCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ILVFFIFRAFNI*ASLSILMSSPF Trigger: GAAAGGAGAACTCATCAGAATGCTTAAAGAAGCCCAGATGTTAAAAGCCCTGAAAATGAAGAACACCAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
||
| 3UTR TCA 72 bp | AGCTTATGCCTGGTGATGACTAACCTGTCAAGAGACTaGAATTTATTAACACAATACTCAAAAATATGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SLCLVMTNLSRD*NLLTQYSKIWL Trigger: TAGCCATATTTTTGAGTATTGTGTTAATAAATTTCAGTCTCTTGACAGGTTAGTCATCACCAGGCATAAGCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
||
| 3UTR TCA 72 bp | GTGGACAGAACATACATAACCAGGCTACAATTTGCCTaGAGCCTGAGATTTGATAACATAAATGTTAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: VDRTYITRLQFA*SLRFDNINVKL Trigger: TAATTTAACATTTATGTTATCAAATCTCAGGCTTCAGGCAAATTGTAGCCTGGTTATGTATGTTCTGTCCAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
||
| CDS-3UTR TCA 90 bp | TCACCACAGGCCGCTGCTGTCAGGAGCATGGCTTCAGGAGCAGAAAAGGCAGCATGTCCGACTCGCCGCTaGTGGGCTCCAGCTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPQAAAVRSMASGAEKAACPTRR*WAPAFS Trigger: GGAGAAAGCTGGAGCCCATCAGCGGCGAGTCGGACA...TGCTGCCTTTTCTGCTCCTGAAGCCATGCTCCTGACAGCAGCGGCCTGTGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| CDS-3UTR CCA 90 bp | TTGGGAGGCTTGGCTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCCTTCCCTCTGTGGGTaGCCAGGGAACTGGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGGLAGWLPSSREPCLHLPSLCG*PGNWRT Trigger: TGTCCTCCAGTTCCCTGGCCACCCACAGAGGGAAGG...GAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAGCCAAGCCTCCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| 3UTR CAA 72 bp | CTGACCAAGGATTCTCAAACCCCGCCATCCTGCAACTaGTCAGCCGGCGGGCTTTCTGCCGCTGCCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LTKDSQTPPSCN*SAGGLSAAAWD Trigger: ATCCCAGGCAGCGGCAGAAAGCCCGCCGGCTGACAAGTTGCAGGATGGCGGGGTTTGAGAATCCTTGGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
||
| 3UTR CAA 72 bp | GCAGCCTCTCACTGGGCTGGTGTTCAGTTGGGAGGCTaGGCTGGATGGCTACCAAGCTCCAGGGAGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: AASHWAGVQLGG*AGWLPSSREPC Trigger: ACATGGCTCCCTGGAGCTTGGTAGCCATCCAGCCAAGCCTCCCAACTGAACACCAGCCCAGTGAGAGGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGAGGCTTGGCTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCAGCCTGGCGTTGCTGTaGCCTTGGTCCTTCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGGLAGWLPSSREPCLHLSLALL*PWSFCR Trigger: TCTGCAGAAGGACCAAGGTCACAGCAACGCCAGGCT...GAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAGCCAAGCCTCCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| CDS-3UTR GCA 90 bp | GCTTGGCTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCCTAGCATTGGTCTCTTCCTCCTaGCAGGAGACGGCCGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: AWLDGYQAPGSHVSTSLALVSSS*QETAAL Trigger: AAGTGCGGCCGTCTCCTGGCAGGAGGAAGAGACCAA...TGCTAGGGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAGCCAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| 3UTR CAA 72 bp | ACGGTGCTGCAGGAGCAGCCTGGCGTTGCTGTGACCTaGGTCCTTCTGCAGATGCCACCCTCCTCCTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: TVLQEQPGVAVT*VLLQMPPSSLH Trigger: ATGTAAGGAGGAGGGTGGCATCTGCAGAAGGACCAAGGTCACAGCAACGCCAGGCTGCTCCTGCAGCACCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
||
| CDS-3UTR CCA 90 bp | CTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCCTAGCACTGGGAAGGACACACAGTGTTTaGACAGCTCGTCTTCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LDGYQAPGSHVSTSLALGRTHSV*TARLLR Trigger: ACGCAGAAGACGAGCTGTCCAAACACTGTGTGTCCT...TCCCAGTGCTAGGGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| 3UTR CAA 72 bp | TACTTTCAGAACCATCTGTGTCTGTGTGTCCGCGCCTaGGTCTCTTCCTCCTGCCAGGAGACGGCCGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: YFQNHLCLCVRA*VSSSCQETAAL Trigger: AAGTGCGGCCGTCTCCTGGCAGGAGGAAGAGACCAAGGCGCGGACACACAGACACAGATGGTTCTGAAAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGATGCTGAATTTGCTGACGCTGCAGATAAGAGCCTTGGTTCAATGGATGTGGCCTCTCAGGGGGTaGCGGTGCTGCAGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKMLNLLTLQIRALVQWMWPLRG*RCCRSS Trigger: GCTGCTCCTGCAGCACCGTCACCCCCTGAGAGGCCA...CATCCATTGAACCAAGGCTCTTATCTGCAGCGTCAGCAAATTCAGCATCTTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| CDS-3UTR TCA 90 bp | GAGGCTTGGCTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCCTATGCTCCCGGTATGCTTaGGGCATCAGAATTATTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EAWLDGYQAPGSHVSTSLCSRYA*GIRIIR Trigger: TCTAATAATTCTGATGCCTCAAGCATACCGGGAGCA...TAGGGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAGCCAAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGACTTCACTTCTGGAGAAACAGATGACACCAGCACCTCACTGACCAAGCTCGCCTTCCCTCTGTaGGTGGCCAGGGAACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KEDFTSGETDDTSTSLTKLAFPL*VARELE Trigger: CTCCAGTTCCCTGGCCACCCACAGAGGGAAGGCGAG...CTTGGTCAGTGAGGTGCTGGTGTCATCTGTTTCTCCAGAAGTGAAGTCTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| CDS-3UTR CCA 90 bp | CTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCCTAGCACTGGGACTTTCCCGTTCCCTTTaGTCCTTTCTCTTGAACGTT | + |
|
Preference number: 4 (lower is better) Translates to: LDGYQAPGSHVSTSLALGLSRSL*SFLLNV Trigger: AACGTTCAAGAGAAAGGACCAAAGGGAACGGGAAAG...TCCCAGTGCTAGGGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| 3UTR CAA 72 bp | GCCGCACTTTCTTCTGAGTTTTCAGCTGACTTTGGGTaGCTGGTGTCTCGTCTACAGGAGAGAGCTGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: AALSSEFSADFG*LVSRLQERAER Trigger: GCGCTCAGCTCTCTCCTGTAGACGAGACACCAGCAACCCAAAGTCAGCTGAAAACTCAGAAGAAAGTGCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122838.2 ENSMUST00000135432.8 |
||
| CDS-3UTR TCA 90 bp | ATTCTCAAACCCCGCCATCCTGCAACTTGTCAGCCGGCGGGCTTTCTGCCGCTGTCTCAAAGTGTTCTTTaGATGTTTTGCACCCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILKPRHPATCQPAGFLPLSQSVL*MFCTRV Trigger: AACCCGGGTGCAAAACATTCAAAGAACACTTTGAGA...CAGCGGCAGAAAGCCCGCCGGCTGACAAGTTGCAGGATGGCGGGGTTTGAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCTTGGCTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCCTATCTCAAAGTGTTCTTTaGATGTTTTGCACCCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EAWLDGYQAPGSHVSTSLSQSVL*MFCTRV Trigger: AACCCGGGTGCAAAACATTCAAAGAACACTTTGAGA...TAGGGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAGCCAAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
||
| CDS-3UTR GCA 90 bp | CTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCCTAGCACTGGGAAGACTCATTTCCACTTaGTTCATCTTCAGAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LDGYQAPGSHVSTSLALGRLIST*FIFRRV Trigger: GACCCTTCTGAAGATGAAGCAAGTGGAAATGAGTCT...TCCCAGTGCTAGGGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| 3UTR CAA 72 bp | AGACGGCCGCACTTTCTTCTGAGTTTTCAGCTGACTTaGGGTTGCTGGTGTCTCGTCTACAGGAGAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRPHFLLSFQLT*GCWCLVYRREL Trigger: CAGCTCTCTCCTGTAGACGAGACACCAGCAACCCAAAGTCAGCTGAAAACTCAGAAGAAAGTGCGGCCGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122838.2 ENSMUST00000135432.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTCAAACCCCGCCATCCTGCAACTTGTCAGCCGGCGGGCTTTCTGCCGCTGAGGGCTTTTAACATCTaGGCTTCTTTAAGCATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILKPRHPATCQPAGFLPLRAFNI*ASLSIL Trigger: CAGAATGCTTAAAGAAGCCCAGATGTTAAAAGCCCT...CAGCGGCAGAAAGCCCGCCGGCTGACAAGTTGCAGGATGGCGGGGTTTGAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| CDS-3UTR GCA 90 bp | CTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCCTAGCACTGGGAGTTTCCTGGAATATGTaGTTCTCAAAGTGTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LDGYQAPGSHVSTSLALGVSWNM*FSKCSL Trigger: CAAAGAACACTTTGAGAAGCACATATTCCAGGAAAC...TCCCAGTGCTAGGGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGACTTCACTTCTGGAGAAACAGATGACACCAGCACCTCACTGACCAAGCCTCCTTACATCATCTaGAGAGCTGTCCGACTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KEDFTSGETDDTSTSLTKPPYII*RAVRLA Trigger: GGCGAGTCGGACAGCTCTGCAGATGATGTAAGGAGG...CTTGGTCAGTGAGGTGCTGGTGTCATCTGTTTCTCCAGAAGTGAAGTCTTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| CDS-3UTR GCA 90 bp | CTGACCAAGGATTCTCAAACCCCGCCATCCTGCAACTTGTCAGCCGGCGGGCTTTCCAGACACCAGATATaGATACTTTCAGAACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LTKDSQTPPSCNLSAGGLSRHQI*ILSEPS Trigger: AGATGGTTCTGAAAGTATGCATATCTGGTGTCTGGA...AAGCCCGCCGGCTGACAAGTTGCAGGATGGCGGGGTTTGAGAATCCTTGGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| CDS-3UTR CCA 90 bp | TCACCACAGGCCGCTGCTGTCAGGAGCATGGCTTCAGGAGCAGAAAAGGCAGCACAGCTTTCTGTTTCCTaGAATATGTGCTTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPQAAAVRSMASGAEKAAQLSVS*NMCFSK Trigger: CTTTGAGAAGCACATATTCCAGGAAACAGAAAGCTG...TGCTGCCTTTTCTGCTCCTGAAGCCATGCTCCTGACAGCAGCGGCCTGTGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| CDS-3UTR CCA 90 bp | GCCAGGAGACGGCCGCACTTTCTTCTGAGTTTTCAGCTGACTTTGGGTTGCTGGCTCCAGCTTTCTCCTTaGCTTGATAGACTCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARRRPHFLLSFQLTLGCWLQLSP*LDRLIS Trigger: GGAAATGAGTCTATCAAGCCAAGGAGAAAGCTGGAG...CCAGCAACCCAAAGTCAGCTGAAAACTCAGAAGAAAGTGCGGCCGTCTCCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122838.2 |
||
| CDS-3UTR GCA 90 bp | TCACCACAGGCCGCTGCTGTCAGGAGCATGGCTTCAGGAGCAGAAAAGGCAGCATCAGATTCTACTCTTTaGTTATACTCCAGGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPQAAAVRSMASGAEKAASDSTL*LYSRKV Trigger: AACCTTCCTGGAGTATAAGCAAAGAGTAGAATCTGA...TGCTGCCTTTTCTGCTCCTGAAGCCATGCTCCTGACAGCAGCGGCCTGTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| CDS-3UTR GCA 90 bp | ACTTCCCTTTGCTGTACCCCTTCTGAGGAGTTGAAATGTATCTGCCATGAGCTATGGTCCTTCTGCAGATaGCACCCTCCTCCTTACATC | + |
|
Preference number: 4 (lower is better) Translates to: TSLCCTPSEELKCICHELWSFCR*HPPPYI Trigger: GATGTAAGGAGGAGGGTGGCATCTGCAGAAGGACCA...TAGCTCATGGCAGATACATTTCAACTCCTCAGAAGGGGTACAGCAAAGGGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| CDS-3UTR GCA 90 bp | AATCTAGAAACTTCCCTTTGCTGTACCCCTTCTGAGGAGTTGAAATGTATCTGCAAGGGTCCAAGTTTCTaGTCGCCTTCCCTCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLETSLCCTPSEELKCICKGPSF*SPSLCG Trigger: CCCACAGAGGGAAGGCGAGCAGAAACTTGGACCCTT...GCAGATACATTTCAACTCCTCAGAAGGGGTACAGCAAAGGGAAGTTTCTAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
||
| CDS-3UTR TCA 90 bp | GGAGAAACAGATGACACCAGCACCTCACTGACCAAGGATTCTCAAACCCCGCCATTTCTCTTGAACGTTTaGATAATCTTGACACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GETDDTSTSLTKDSQTPPFLLNV*IILTQL Trigger: CAGCTGTGTCAAGATTATTCAAACGTTCAAGAGAAA...TGGCGGGGTTTGAGAATCCTTGGTCAGTGAGGTGCTGGTGTCATCTGTTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
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| CDS-3UTR CCA 90 bp | GCCGCACTTTCTTCTGAGTTTTCAGCTGACTTTGGGTTGCTGGTGTCTCGTCTACTCCTTCCTGTTTCCTaGAATATGTGCTTCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: AALSSEFSADFGLLVSRLLLPVS*NMCFSK Trigger: CTTTGAGAAGCACATATTCCAGGAAACAGGAAGGAG...TAGACGAGACACCAGCAACCCAAAGTCAGCTGAAAACTCAGAAGAAAGTGCGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| CDS-3UTR GCA 90 bp | GGAGAAACAGATGACACCAGCACCTCACTGACCAAGGATTCTCAAACCCCGCCAACTTCAATTAAACGCTaGCTTTTCTTTTCCATGTTG | + |
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Preference number: 4 (lower is better) Translates to: GETDDTSTSLTKDSQTPPTSIKR*LFFSML Trigger: CAACATGGAAAAGAAAAGGCAGCGTTTAATTGAAGT...TGGCGGGGTTTGAGAATCCTTGGTCAGTGAGGTGCTGGTGTCATCTGTTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
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| CDS-3UTR CCA 90 bp | AGCCTTGGTTCAATGGATGATATTCCTGATGAACTAATTATAGAAGCTTTACAGGCTGCAGGAGCAGCCTaGCGTTGCTGTGACCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SLGSMDDIPDELIIEALQAAGAA*RCCDLG Trigger: ACCAAGGTCACAGCAACGCCAGGCTGCTCCTGCAGC...CTGTAAAGCTTCTATAATTAGTTCATCAGGAATATCATCCATTGAACCAAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
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| CDS-3UTR CCA 90 bp | GAATTATTAGAAAAGTCAAACACATCCTTGGGCCGGGGCTTTGGACCAGCTTTCCTCCTTCCTGTTTCCTaGAATATGTGCTTCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: ELLEKSNTSLGRGFGPAFLLPVS*NMCFSK Trigger: CTTTGAGAAGCACATATTCCAGGAAACAGGAAGGAG...GAAAGCTGGTCCAAAGCCCCGGCCCAAGGATGTGTTTGACTTTTCTAATAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135432.8 ENSMUST00000153908.2 |
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| CDS-3UTR TCA 90 bp | AGAATTATTAGAAAAGTCAAACACATCCTTGGGCCGGGGCTTTGGACCAGCTTTTCTCAAAGTGTTCTTTaGATGTTTTGCACCCGGGTT | + |
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Preference number: 4 (lower is better) Translates to: RIIRKVKHILGPGLWTSFSQSVL*MFCTRV Trigger: AACCCGGGTGCAAAACATTCAAAGAACACTTTGAGA...AAAGCTGGTCCAAAGCCCCGGCCCAAGGATGTGTTTGACTTTTCTAATAATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000135432.8 ENSMUST00000153908.2 |
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| CDS-3UTR GCA 90 bp | TGTCGTTTCCAGTCATGGATAGGGAGACGTAAAACACTGACCGAAGGTTTCGTAGTTTCCTGGAATATGTaGTTCTCAAAGTGTTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: CRFQSWIGRRKTLTEGFVVSWNM*FSKCSL Trigger: CAAAGAACACTTTGAGAAGCACATATTCCAGGAAAC...TACGAAACCTTCGGTCAGTGTTTTACGTCTCCCTATCCATGACTGGAAACGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153908.2 |
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| CDS-3UTR CCA 90 bp | CAGAAGATGCTGAATTTGCTGACGCTGCAGATAAGAGCCTTGGTTCAATGGATGTGTTGGCAATTATCTTaGTGTTCTTCATTTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: QKMLNLLTLQIRALVQWMCWQLS*CSSFSG Trigger: CCCTGAAAATGAAGAACACCAAGATAATTGCCAACA...CATCCATTGAACCAAGGCTCTTATCTGCAGCGTCAGCAAATTCAGCATCTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
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| CDS-3UTR GCA 90 bp | ATTAGAAAAGTCAAACACATCCTTGGGCCGGGGCTTTGGACCAGCTTTCTAAATGTTTCCTGGAATATGTaGTTCTCAAAGTGTTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: IRKVKHILGPGLWTSFLNVSWNM*FSKCSL Trigger: CAAAGAACACTTTGAGAAGCACATATTCCAGGAAAC...ATTTAGAAAGCTGGTCCAAAGCCCCGGCCCAAGGATGTGTTTGACTTTTCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135432.8 ENSMUST00000153908.2 |
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| 3UTR CAA 72 bp | ACCGTTCTATCACTTGGTTTACCTAAGCCAGATTTATaGAAGACTACCTTTGACATATTTCAGCAGACGCTC | + |
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Preference number: 4 (lower is better) Translates to: TVLSLGLPKPDL*KTTFDIFQQTL Trigger: GAGCGTCTGCTGAAATATGTCAAAGGTAGTCTTCAATAAATCTGGCTTAGGTAAACCAAGTGATAGAACGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| CDS-3UTR CAA 90 bp | TCACCACAGGCCGCTGCTGTCAGGAGCATGGCTTCAGGAGCAGAAAAGGCAGCAAAGTCAAACACATCCTaGGGCCGGGGCTTTGGACCA | + |
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Preference number: 5 (lower is better) Translates to: SPQAAAVRSMASGAEKAAKSNTS*GRGFGP Trigger: TGGTCCAAAGCCCCGGCCCAAGGATGTGTTTGACTT...TGCTGCCTTTTCTGCTCCTGAAGCCATGCTCCTGACAGCAGCGGCCTGTGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
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| CDS CCA 90 bp | TGCAGAGCTGTCCGACTCGCCGCTGATGGGCTCCAGCTTTCTCCTTaGCTTGATAGACTCATTTCCACTTGCTTCATCTTCAGAAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: CRAVRLAADGLQLSP*LDRLISTCFIFRRV Trigger: GACCCTTCTGAAGATGAAGCAAGTGGAAATGAGTCTATCAAGCCAAGGAGAAAGCTGGAGCCCATCAGCGGCGAGTCGGACAGCTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122838.2 |
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| CDS-3UTR CAA 90 bp | ACTTCCCTTTGCTGTACCCCTTCTGAGGAGTTGAAATGTATCTGCCATGAGCTACTGTGTGTCCGCGCCTaGGTCTCTTCCTCCTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: TSLCCTPSEELKCICHELLCVRA*VSSSCQ Trigger: CTGGCAGGAGGAAGAGACCAAGGCGCGGACACACAG...TAGCTCATGGCAGATACATTTCAACTCCTCAGAAGGGGTACAGCAAAGGGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
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| CDS-3UTR CAA 90 bp | TGGGAGGCTTGGCTGGATGGCTACCAAGCTCCAGGGAGCCATGTCTCCACCTCCTTCAGATTCTACTCTTaGCTTATACTCCAGGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: WEAWLDGYQAPGSHVSTSFRFYS*LILQEG Trigger: ACCTTCCTGGAGTATAAGCAAAGAGTAGAATCTGAA...GGAGGTGGAGACATGGCTCCCTGGAGCTTGGTAGCCATCCAGCCAAGCCTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
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| CDS GCA 90 bp | GATGGGCTCCAGCTTTCTCCTTGGCTTGATAGACTCATTTCCACTTaGTTCATCTTCAGAAGGGTCCAAGCTGTGTCAAACAACAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: DGLQLSPWLDRLIST*FIFRRVQAVSNNKP Trigger: CGGCTTGTTGTTTGACACAGCTTGGACCCTTCTGAAGATGAAGCAAGTGGAAATGAGTCTATCAAGCCAAGGAGAAAGCTGGAGCCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122838.2 |
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| CDS TCA 90 bp | GACTCCTTCCTGTTTCCTGGAATATGTGCTTCTCAAAGTGTTCTTTaGATGTTTTGCACCCGGGTTCCCCGAGTATCTCAAACTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: DSFLFPGICASQSVL*MFCTRVPRVSQTSP Trigger: AGGAGAAGTTTGAGATACTCGGGGAACCCGGGTGCAAAACATTCAAAGAACACTTTGAGAAGCACATATTCCAGGAAACAGGAAGGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135432.8 ENSMUST00000153908.2 |
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| CDS-3UTR CAA 90 bp | GCACTTTCTTCTGAGTTTTCAGCTGACTTTGGGTTGCTGGTGTCTCGTCTACAGTTCTCAAAGTGTTCTTaGAATGTTTTGCACCCGGGT | + |
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Preference number: 5 (lower is better) Translates to: ALSSEFSADFGLLVSRLQFSKCS*NVLHPG Trigger: ACCCGGGTGCAAAACATTCAAAGAACACTTTGAGAA...CTGTAGACGAGACACCAGCAACCCAAAGTCAGCTGAAAACTCAGAAGAAAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135432.8 |
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| CDS TCA 90 bp | ACCAGCTTTCTGTTTCCTGGAATATGTGCTTCTCAAAGTGTTCTTTaGATGTTTTGCACCCGGGTTCCCCGAGTATCTCAAACTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: TSFLFPGICASQSVL*MFCTRVPRVSQTSP Trigger: AGGAGAAGTTTGAGATACTCGGGGAACCCGGGTGCAAAACATTCAAAGAACACTTTGAGAAGCACATATTCCAGGAAACAGAAAGCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000210368.2 |
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| CDS-3UTR CAA 90 bp | CAGAAGATGCTGAATTTGCTGACGCTGCAGATAAGAGCCTTGGTTCAATGGATGTTCTCAAAGTGTTCTTaGAATGTTTTGCACCCGGGT | + |
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Preference number: 5 (lower is better) Translates to: QKMLNLLTLQIRALVQWMFSKCS*NVLHPG Trigger: ACCCGGGTGCAAAACATTCAAAGAACACTTTGAGAA...CATCCATTGAACCAAGGCTCTTATCTGCAGCGTCAGCAAATTCAGCATCTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034045.15 ENSMUST00000135432.8 |
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| CDS-3UTR CAA 90 bp | TGTCGTTTCCAGTCATGGATAGGGAGACGTAAAACACTGACCGAAGGTTTCGTATTCTCAAAGTGTTCTTaGAATGTTTTGCACCCGGGT | + |
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Preference number: 5 (lower is better) Translates to: CRFQSWIGRRKTLTEGFVFSKCS*NVLHPG Trigger: ACCCGGGTGCAAAACATTCAAAGAACACTTTGAGAA...TACGAAACCTTCGGTCAGTGTTTTACGTCTCCCTATCCATGACTGGAAACGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153908.2 |
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| CDS-3UTR CAA 90 bp | AAGGAAGACTTCACTTCTGGAGAAACAGATGACACCAGCACCTCACTGACCAAGATGTTGGCAATTATCTaGGTGTTCTTCATTTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: KEDFTSGETDDTSTSLTKMLAII*VFFIFR Trigger: CCTGAAAATGAAGAACACCAAGATAATTGCCAACAT...CTTGGTCAGTGAGGTGCTGGTGTCATCTGTTTCTCCAGAAGTGAAGTCTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034045.15 |
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| CDS CAA 90 bp | GAGCTGTCCGACTCGCCGCTGATGGGCTCCAGCTTTCTCCTTGGCTaGATAGACTCATTTCCACTTGCTTCATCTTCAGAAGGGTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: ELSDSPLMGSSFLLG*IDSFPLASSSEGSK Trigger: CTTGGACCCTTCTGAAGATGAAGCAAGTGGAAATGAGTCTATCAAGCCAAGGAGAAAGCTGGAGCCCATCAGCGGCGAGTCGGACAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122838.2 |
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| CDS CAA 72 bp | GACTCGCCGCTGATGGGCTCCAGCTTTCTCCTTGGCTaGATAGACTCATTTCCACTTGCTTCATCTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: DSPLMGSSFLLG*IDSFPLASSSE Trigger: TTCTGAAGATGAAGCAAGTGGAAATGAGTCTATCAAGCCAAGGAGAAAGCTGGAGCCCATCAGCGGCGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122838.2 |
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