Pregenerated sensors for CENPO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020652Ensembl transcript IDs: ENSMUST00000020981.12, ENSMUST00000111169.10, ENSMUST00000128466.2, ENSMUST00000140975.8, ENSMUST00000146261.2
Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCCTCTCAGTCTGGGGGAGGAATCCACCTGTGAGGGCAAAGGCTaGTGGGCACCGCACGATGGCATGCCTCACCCAGCACCGCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: GPLSLGEESTCEGKG*WAPHDGMPHPAPLL Trigger: GAGAAGCGGTGCTGGGTGAGGCATGCCATCGTGCGGTGCCCAGCAGCCTTTGCCCTCACAGGTGGATTCCTCCCCCAGACTGAGAGGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR TCA 90 bp | TTGTTCCAGCTCAGCCCTTCACCCCTAGAGAGGCCATGGCCACTGTaGGCAGGATGCCAGCCGAGGCGGAACGAAGCTGCCTGTGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: LFQLSPSPLERPWPL*AGCQPRRNEAACAG Trigger: CCCAGCACAGGCAGCTTCGTTCCGCCTCGGCTGGCATCCTGCTCACAGTGGCCATGGCCTCTCTAGGGGTGAAGGGCTGAGCTGGAACAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR GCA 90 bp | AATCCACCTGTGAGGGCAAAGGCTGCTGGGCACCGCACGATGGCATaGCTCACCCAGCACCGCTTCTCTGTGACTGGCAGGTACGTGCGG | + |
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Preference number: 1 (lower is better) Translates to: NPPVRAKAAGHRTMA*LTQHRFSVTGRYVR Trigger: CCGCACGTACCTGCCAGTCACAGAGAAGCGGTGCTGGGTGAGGCATGCCATCGTGCGGTGCCCAGCAGCCTTTGCCCTCACAGGTGGATT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR CCA 90 bp | CCTCTCAGTCTGGGGGAGGAATCCACCTGTGAGGGCAAAGGCTGCTaGGCACCGCACGATGGCATGCCTCACCCAGCACCGCTTCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: PLSLGEESTCEGKGC*APHDGMPHPAPLLC Trigger: ACAGAGAAGCGGTGCTGGGTGAGGCATGCCATCGTGCGGTGCCCAGCAGCCTTTGCCCTCACAGGTGGATTCCTCCCCCAGACTGAGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR TCA 90 bp | CTGGGCACCGCACGATGGCATGCCTCACCCAGCACCGCTTCTCTGTaGCTGGCAGGTACGTGCGGGAGAAGACCAAGACTGGAGTGGACA | + |
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Preference number: 1 (lower is better) Translates to: LGTARWHASPSTASL*LAGTCGRRPRLEWT Trigger: TGTCCACTCCAGTCTTGGTCTTCTCCCGCACGTACCTGCCAGTCACAGAGAAGCGGTGCTGGGTGAGGCATGCCATCGTGCGGTGCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR GCA 90 bp | GGGGCAGGCAAGGCCTATCTCTGGAGCATGCTCAGGGTTTCTCATTaGGCCGCAGGCGCGTGCACATTTCCCAGAGCACCATGGACTGCC | + |
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Preference number: 1 (lower is better) Translates to: GAGKAYLWSMLRVSH*AAGACTFPRAPWTA Trigger: GGCAGTCCATGGTGCTCTGGGAAATGTGCACGCGCCTGCGGCGCAATGAGAAACCCTGAGCATGCTCCAGAGATAGGCCTTGCCTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
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| 3UTR CCA 90 bp | GCACCGCACGATGGCATGCCTCACCCAGCACCGCTTCTCTGTGACTaGCAGGTACGTGCGGGAGAAGACCAAGACTGGAGTGGACATGCG | + |
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Preference number: 1 (lower is better) Translates to: APHDGMPHPAPLLCD*QVRAGEDQDWSGHA Trigger: CGCATGTCCACTCCAGTCTTGGTCTTCTCCCGCACGTACCTGCCAGTCACAGAGAAGCGGTGCTGGGTGAGGCATGCCATCGTGCGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR CCA 90 bp | AACAGCCAGAGGCACCGAAGCGTCTGGGGCAGGGAGGGAAAGCAGTaGACAGTACATGGCCATCAGACTGCAGTTAGCCATGGGGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: NSQRHRSVWGREGKQ*TVHGHQTAVSHGGG Trigger: CCCACCCCCATGGCTAACTGCAGTCTGATGGCCATGTACTGTCCACTGCTTTCCCTCCCTGCCCCAGACGCTTCGGTGCCTCTGGCTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR GCA 90 bp | GTCTGCTGTCTGTCTCTGGGGCAGGCAAGGCCTATCTCTGGAGCATaGTCAGGGTTTCTCATTGCGCCGCAGGCGCGTGCACATTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: VCCLSLGQARPISGA*SGFLIAPQARAHFP Trigger: TGGGAAATGTGCACGCGCCTGCGGCGCAATGAGAAACCCTGAGCATGCTCCAGAGATAGGCCTTGCCTGCCCCAGAGACAGACAGCAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
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| 3UTR CCA 90 bp | GGCTCAGGGCTGAGGAGGCTCTGCACCCGGCTGCTCCTTCCTGTCTaGTTAGGTCAATGGCCCTTACCCCACCCACTGTTCCTGATAATC | + |
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Preference number: 1 (lower is better) Translates to: GSGLRRLCTRLLLPV*LGQWPLPHPLFLII Trigger: GATTATCAGGAACAGTGGGTGGGGTAAGGGCCATTGACCTAACCAGACAGGAAGGAGCAGCCGGGTGCAGAGCCTCCTCAGCCCTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR GCA 90 bp | TACCCTGGAGTCACTCGCCCCAGTACCAGTCAGTGCTATGTGGTCTaGTGTCTGTCTCTGGGGCAGGCAAGGCCTATCTCTGGAGCATGC | + |
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Preference number: 1 (lower is better) Translates to: YPGVTRPSTSQCYVV*CLSLGQARPISGAC Trigger: GCATGCTCCAGAGATAGGCCTTGCCTGCCCCAGAGACAGACAGCAGACCACATAGCACTGACTGGTACTGGGGCGAGTGACTCCAGGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
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| 3UTR GCA 90 bp | CCCTACCAAATATACCCTGGAGTCACTCGCCCCAGTACCAGTCAGTaGTATGTGGTCTGCTGTCTGTCTCTGGGGCAGGCAAGGCCTATC | + |
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Preference number: 1 (lower is better) Translates to: PYQIYPGVTRPSTSQ*YVVCCLSLGQARPI Trigger: GATAGGCCTTGCCTGCCCCAGAGACAGACAGCAGACCACATAGCACTGACTGGTACTGGGGCGAGTGACTCCAGGGTATATTTGGTAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
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| 3UTR CCA 90 bp | ACAAGATGGAGGCTGGTGGCATCCCAGGGTGAGTACTCCTTCCAATaGGGTTGGTATAAGGACCAAGGGAGGGGAACCGTCCCATCCACT | + |
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Preference number: 1 (lower is better) Translates to: TRWRLVASQGEYSFQ*GWYKDQGRGTVPST Trigger: AGTGGATGGGACGGTTCCCCTCCCTTGGTCCTTATACCAACCCCATTGGAAGGAGTACTCACCCTGGGATGCCACCAGCCTCCATCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR CCA 90 bp | TACTATAGGTGTGAGGGACAGAACAGCCAGAGGCACCGAAGCGTCTaGGGCAGGGAGGGAAAGCAGTGGACAGTACATGGCCATCAGACT | + |
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Preference number: 1 (lower is better) Translates to: YYRCEGQNSQRHRSV*GREGKQWTVHGHQT Trigger: AGTCTGATGGCCATGTACTGTCCACTGCTTTCCCTCCCTGCCCCAGACGCTTCGGTGCCTCTGGCTGTTCTGTCCCTCACACCTATAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR CCA 90 bp | AAATATACCCTGGAGTCACTCGCCCCAGTACCAGTCAGTGCTATGTaGTCTGCTGTCTGTCTCTGGGGCAGGCAAGGCCTATCTCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: KYTLESLAPVPVSAM*SAVCLWGRQGLSLE Trigger: CTCCAGAGATAGGCCTTGCCTGCCCCAGAGACAGACAGCAGACCACATAGCACTGACTGGTACTGGGGCGAGTGACTCCAGGGTATATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
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| 3UTR TCA 90 bp | GGCATCCAGGCAAGCACTCTCCCAACAGCTTTTGCTGACTGGTCCTaGACTGGAGGCAGCACAAGTGTGTTCATTTCTGCTGTCCCCCAA | + |
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Preference number: 1 (lower is better) Translates to: GIQASTLPTAFADWS*TGGSTSVFISAVPQ Trigger: TTGGGGGACAGCAGAAATGAACACACTTGTGCTGCCTCCAGTTCAGGACCAGTCAGCAAAAGCTGTTGGGAGAGTGCTTGCCTGGATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
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| 3UTR GCA 90 bp | CTGAAGGGGGAGTTTGATGTGGAGCCTGGTGATGGGGGCAGTCGCTaGGACTACCTAGATGAGAAGGGCATCGAAACCTACCTCATCATT | + |
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Preference number: 1 (lower is better) Translates to: LKGEFDVEPGDGGSR*DYLDEKGIETYLII Trigger: AATGATGAGGTAGGTTTCGATGCCCTTCTCATCTAGGTAGTCGCAGCGACTGCCCCCATCACCAGGCTCCACATCAAACTCCCCCTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
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| 3UTR CCA 90 bp | AGGAGGCTCTGCACCCGGCTGCTCCTTCCTGTCTGGTTAGGTCAATaGCCCTTACCCCACCCACTGTTCCTGATAATCTTGAAAGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: RRLCTRLLLPVWLGQ*PLPHPLFLIILKGS Trigger: AGAACCTTTCAAGATTATCAGGAACAGTGGGTGGGGTAAGGGCCATTGACCTAACCAGACAGGAAGGAGCAGCCGGGTGCAGAGCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR GCA 90 bp | TATATTACTGGCTCCTGCCTGTGGGCATTAGGTCAGTGTTGGCAGTaGCACAGGGCCAAGGAAACATGGACTGAGGCCTCTAAGGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: YITGSCLWALGQCWQ*HRAKETWTEASKAL Trigger: CAAAGCCTTAGAGGCCTCAGTCCATGTTTCCTTGGCCCTGTGGCACTGCCAACACTGACCTAATGCCCACAGGCAGGAGCCAGTAATATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR CCA 90 bp | GGGAGTCCAACACAAGTAGAAGCCTGGTGCTTTGCCATATATTACTaGCTCCTGCCTGTGGGCATTAGGTCAGTGTTGGCAGTGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: GSPTQVEAWCFAIYY*LLPVGIRSVLAVPQ Trigger: CTGTGGCACTGCCAACACTGACCTAATGCCCACAGGCAGGAGCCAGTAATATATGGCAAAGCACCAGGCTTCTACTTGTGTTGGACTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR CCA 90 bp | GGCAGTATGATGTATGGTCTACTGATGTCACCGTGGCAAACAAGATaGAGGCTGGTGGCATCCCAGGGTGAGTACTCCTTCCAATGGGGT | + |
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Preference number: 1 (lower is better) Translates to: GSMMYGLLMSPWQTR*RLVASQGEYSFQWG Trigger: ACCCCATTGGAAGGAGTACTCACCCTGGGATGCCACCAGCCTCCATCTTGTTTGCCACGGTGACATCAGTAGACCATACATCATACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR TCA 90 bp | CTGGTGCTTACAGGAGGAAGAGATATTCTGGAGCACTGGGCTGAGTaGACAGTGAACAAGCGGCCACTTTGGAGAACTGTTCCAACTGCC | + |
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Preference number: 1 (lower is better) Translates to: LVLTGGRDILEHWAE*TVNKRPLWRTVPTA Trigger: GGCAGTTGGAACAGTTCTCCAAAGTGGCCGCTTGTTCACTGTTCACTCAGCCCAGTGCTCCAGAATATCTCTTCCTCCTGTAAGCACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
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| 3UTR TCA 90 bp | TTAGGTTTCAGATTTCCTCCAGCCTTCCTGTGTGGATGTGAGCTCTaGGGGTGGCTATTCCTACTCCTCAGTGAGCCTGTAGCTTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: LGFRFPPAFLCGCEL*GWLFLLLSEPVASP Trigger: TGGGGAAGCTACAGGCTCACTGAGGAGTAGGAATAGCCACCCTCAGAGCTCACATCCACACAGGAAGGCTGGAGGAAATCTGAAACCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR CCA 90 bp | GACTTGTCTATGTGTACACGCAAGCTCCCTGTCATTCCCATGACGTaGGTATCTGTTCTCATGGTGGCATCCAGGCAAGCACTCTCCCAA | + |
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Preference number: 1 (lower is better) Translates to: DLSMCTRKLPVIPMT*VSVLMVASRQALSQ Trigger: TTGGGAGAGTGCTTGCCTGGATGCCACCATGAGAACAGATACCCACGTCATGGGAATGACAGGGAGCTTGCGTGTACACATAGACAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
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| 3UTR CCA 90 bp | GAGCATGTTGGTTTGAATGCAGGGAGTCCAACACAAGTAGAAGCCTaGTGCTTTGCCATATATTACTGGCTCCTGCCTGTGGGCATTAGG | + |
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Preference number: 1 (lower is better) Translates to: EHVGLNAGSPTQVEA*CFAIYYWLLPVGIR Trigger: CCTAATGCCCACAGGCAGGAGCCAGTAATATATGGCAAAGCACCAGGCTTCTACTTGTGTTGGACTCCCTGCATTCAAACCAACATGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR TCA 90 bp | GGGACACAGGTGTTCCTATTAGCAGCCTTGTGGGCGGGGGTTAGATaGTCGTCTGTGAGAGAGAAATTGGTAGTTTGTGGAAAGCTAATG | + |
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Preference number: 1 (lower is better) Translates to: GTQVFLLAALWAGVR*SSVREKLVVCGKLM Trigger: CATTAGCTTTCCACAAACTACCAATTTCTCTCTCACAGACGATCATCTAACCCCCGCCCACAAGGCTGCTAATAGGAACACCTGTGTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR CCA 90 bp | GCCCTTACCCCACCCACTGTTCCTGATAATCTTGAAAGGTTCTTCTaGAACCCGTGTCACCTTAGTCACGAGAGCAGAAAGTGCAATATT | + |
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Preference number: 1 (lower is better) Translates to: ALTPPTVPDNLERFF*NPCHLSHESRKCNI Trigger: AATATTGCACTTTCTGCTCTCGTGACTAAGGTGACACGGGTTCCAGAAGAACCTTTCAAGATTATCAGGAACAGTGGGTGGGGTAAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR CCA 90 bp | TGGGCATTAGGTCAGTGTTGGCAGTGCCACAGGGCCAAGGAAACATaGACTGAGGCCTCTAAGGCTTTGATTCACTCAAAACATTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: WALGQCWQCHRAKET*TEASKALIHSKHLR Trigger: TCTTAAATGTTTTGAGTGAATCAAAGCCTTAGAGGCCTCAGTCCATGTTTCCTTGGCCCTGTGGCACTGCCAACACTGACCTAATGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR CCA 90 bp | TCTGTGAGAGAGAAATTGGTAGTTTGTGGAAAGCTAATGCAAGCTTaGCTTGTGGCCATGCTCCATTCCTCTACTCTAGGCATGAACAAA | + |
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Preference number: 1 (lower is better) Translates to: SVREKLVVCGKLMQA*LVAMLHSSTLGMNK Trigger: TTTGTTCATGCCTAGAGTAGAGGAATGGAGCATGGCCACAAGCCAAGCTTGCATTAGCTTTCCACAAACTACCAATTTCTCTCTCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR TCA 90 bp | TTAGCCATTTGTCCTGAGTTTCTTTTGGACCTGACAGCAAATCTCTaGATTTCGTGTTTGTCACTCCTGGAGTTCTCAGGCAAGGATCTA | + |
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Preference number: 1 (lower is better) Translates to: LAICPEFLLDLTANL*ISCLSLLEFSGKDL Trigger: TAGATCCTTGCCTGAGAACTCCAGGAGTGACAAACACGAAATTCAGAGATTTGCTGTCAGGTCCAAAAGAAACTCAGGACAAATGGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR TCA 90 bp | ATGCCCTTTGGTATGCTAATAGGAACCACAGTTAGCCATTTGTCCTaGGTTTCTTTTGGACCTGACAGCAAATCTCTGAATTTCGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: MPFGMLIGTTVSHLS*VSFGPDSKSLNFVF Trigger: AAACACGAAATTCAGAGATTTGCTGTCAGGTCCAAAAGAAACTCAGGACAAATGGCTAACTGTGGTTCCTATTAGCATACCAAAGGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGGCACCGAAGCGTCTGGGGCAGGGAGGGAAAGCAGTGGACAGTACATGGTGTGAGGGCAAAGGCTaGTGGGCACCGCACGATGGC | + |
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Preference number: 2 (lower is better) Translates to: PEAPKRLGQGGKAVDSTWCEGKG*WAPHDG Trigger: GCCATCGTGCGGTGCCCAGCAGCCTTTGCCCTCACA...CCATGTACTGTCCACTGCTTTCCCTCCCTGCCCCAGACGCTTCGGTGCCTCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR CAA 90 bp | TGGGGCAGGCAAGGCCTATCTCTGGAGCATGCTCAGGGTTTCTCATaGCGCCGCAGGCGCGTGCACATTTCCCAGAGCACCATGGACTGC | + |
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Preference number: 2 (lower is better) Translates to: WGRQGLSLEHAQGFS*RRRRVHISQSTMDC Trigger: GCAGTCCATGGTGCTCTGGGAAATGTGCACGCGCCTGCGGCGCAATGAGAAACCCTGAGCATGCTCCAGAGATAGGCCTTGCCTGCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
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| 3UTR-3UTR TCA 90 bp | AGGGCTGAGGAGGCTCTGCACCCGGCTGCTCCTTCCTGTCTGGTTAGGTCAATGTGTAATGAGAGGGCATaGCCAGCAGGCAGGCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: RAEEALHPAAPSCLVRSMCNERA*PAGRPK Trigger: CTTAGGCCTGCCTGCTGGTCATGCCCTCTCATTACA...CATTGACCTAACCAGACAGGAAGGAGCAGCCGGGTGCAGAGCCTCCTCAGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGGCACCGAAGCGTCTGGGGCAGGGAGGGAAAGCAGTGGACAGTACATGGCTGGGCCAGAAGCGCTaGCAGTATGATGTATGGTCT | + |
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Preference number: 2 (lower is better) Translates to: PEAPKRLGQGGKAVDSTWLGQKR*QYDVWS Trigger: AGACCATACATCATACTGCCAGCGCTTCTGGCCCAG...CCATGTACTGTCCACTGCTTTCCCTCCCTGCCCCAGACGCTTCGGTGCCTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTTTACTATAGGTGTGAGGGACAGAACAGCCAGAGGCACCGAAGCGTCTGGGGGGACGCCCATGAGCTaGAGGTTTGGGATGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: VFTIGVRDRTARGTEASGGTPMS*RFGMGW Trigger: CCACCCCATCCCAAACCTCCAGCTCATGGGCGTCCC...CCCAGACGCTTCGGTGCCTCTGGCTGTTCTGTCCCTCACACCTATAGTAAAAAC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR CAA 90 bp | AGCAGGAGTCTTAGGCATAGTACTGGAGCAGCCTTTCCAGAGCCTTaGTTCCAGCTCAGCCCTTCACCCCTAGAGAGGCCATGGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: SRSLRHSTGAAFPEP*FQLSPSPLERPWPL Trigger: CAGTGGCCATGGCCTCTCTAGGGGTGAAGGGCTGAGCTGGAACAAAGGCTCTGGAAAGGCTGCTCCAGTACTATGCCTAAGACTCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCACAGGAGTCATGGGCAACATCCAGGTATGTTCAGTACTAGAACTGAGCATGGTTGGGCTCAGGGCTaGGGAGGCTCTGCACCCGGC | + |
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Preference number: 2 (lower is better) Translates to: IHRSHGQHPGMFSTRTEHGWAQG*GGSAPG Trigger: GCCGGGTGCAGAGCCTCCTCAGCCCTGAGCCCAACC...ATGCTCAGTTCTAGTACTGAACATACCTGGATGTTGCCCATGACTCCTGTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR-3UTR GCA 90 bp | AACAGCCAGAGGCACCGAAGCGTCTGGGGCAGGGAGGGAAAGCAGTGGACAGTAGTTACCTGTCCCCCATaGCTGTCATCACTGAATCTG | + |
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Preference number: 2 (lower is better) Translates to: NSQRHRSVWGREGKQWTVVTCPP*LSSLNL Trigger: CAGATTCAGTGATGACAGGCATGGGGGACAGGTAAC...TACTGTCCACTGCTTTCCCTCCCTGCCCCAGACGCTTCGGTGCCTCTGGCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGCAAGGCCTATCTCTGGAGCATGCTCAGGGTTTCTCATTGCGCCGCAGGCGAACCTACCTCATCATTaGCTCCAAGCCAGAGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: QARPISGACSGFLIAPQANLPHH*LQARGE Trigger: TTCACCTCTGGCTTGGAGGCAATGATGAGGTAGGTT...CGCCTGCGGCGCAATGAGAAACCCTGAGCATGCTCCAGAGATAGGCCTTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGTGGACAGTACATGGCCATCAGACTGCAGTTAGCCATGGGGGTGGGGGAAAACAAGATGGAGGCTaGTGGCATCCCAGGGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: KQWTVHGHQTAVSHGGGGKQDGG*WHPRVS Trigger: ACTCACCCTGGGATGCCACCAGCCTCCATCTTGTTT...TCCCCCACCCCCATGGCTAACTGCAGTCTGATGGCCATGTACTGTCCACTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR-3UTR CCA 90 bp | TGGACCCTAGCCTCCATTAACCCTAGTGCAAGCCACTTAGCTCAGGCAGAAAGCCCGCTTCTCTGTGACTaGCAGGTACGTGCGGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: WTLASINPSASHLAQAESPLLCD*QVRAGE Trigger: TTCTCCCGCACGTACCTGCCAGTCACAGAGAAGCGG...GCTTTCTGCCTGAGCTAAGTGGCTTGCACTAGGGTTAATGGAGGCTAGGGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGTGAAGCCCAAACGCTGGGCCTGTGGAGTAAAGATCCTATCTGGGACTAACGAGCACTGGGCTGAGTaGACAGTGAACAAGCGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RVKPKRWACGVKILSGTNEHWAE*TVNKRP Trigger: TGGCCGCTTGTTCACTGTTCACTCAGCCCAGTGCTC...GTTAGTCCCAGATAGGATCTTTACTCCACAGGCCCAGCGTTTGGGCTTCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGACAGAACAGCCAGAGGCACCGAAGCGTCTGGGGCAGGGAGGGAAAGCAGTCTGACAGCAAATCTCTaGATTTCGTGTTTGTCACTC | + |
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Preference number: 2 (lower is better) Translates to: RDRTARGTEASGAGRESSLTANL*ISCLSL Trigger: GAGTGACAAACACGAAATTCAGAGATTTGCTGTCAG...ACTGCTTTCCCTCCCTGCCCCAGACGCTTCGGTGCCTCTGGCTGTTCTGTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGAAAGCAGTGGACAGTACATGGCCATCAGACTGCAGTTAGCCATGGGGCTACTGATGTCACCGTaGCAAACAAGATGGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GRESSGQYMAIRLQLAMGLLMSP*QTRWRL Trigger: CAGCCTCCATCTTGTTTGCCACGGTGACATCAGTAG...CCCCATGGCTAACTGCAGTCTGATGGCCATGTACTGTCCACTGCTTTCCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCATAGGAAGCCAGGGGAAGGGACGCCCATGAGCTGGAGGTTTGGGATGGGGAATGCTGAAAGAACATaGAAGCCAGCATGCCCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: CHRKPGEGTPMSWRFGMGNAERT*KPACPL Trigger: CAAAGGGCATGCTGGCTTCCATGTTCTTTCAGCATT...CCCCATCCCAAACCTCCAGCTCATGGGCGTCCCTTCCCCTGGCTTCCTATGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGCATGAACAAAGGAGGGGTTCTGGCTGGCGTCATTGGAGCCCGGAAACCACACCTGTATCAGTGCCATaGAATGGTAGTCTGCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: RHEQRRGSGWRHWSPETTPVSVP*NGSLLL Trigger: AAGCAGCAGACTACCATTTCATGGCACTGATACAGG...TGTGGTTTCCGGGCTCCAATGACGCCAGCCAGAACCCCTCCTTTGTTCATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTGGAACAGATACTCACAATGCTGAAAGAACATGGAAGCCAGCATGCCCTTGGAGGAATCCACCTGTaGGGGCAAAGGCTGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: TLEQILTMLKEHGSQHALGGIHL*GQRLLG Trigger: GCCCAGCAGCCTTTGCCCTCACAGGTGGATTCCTCC...AAGGGCATGCTGGCTTCCATGTTCTTTCAGCATTGTGAGTATCTGTTCCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGTTTTTACTATAGGTGTGAGGGACAGAACAGCCAGAGGCACCGAAGCGTCAGACCAAGACTGGAGTaGACATGCGTGTGGGAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: QGFYYRCEGQNSQRHRSVRPRLE*TCVWEC Trigger: GCACTCCCACACGCATGTCCACTCCAGTCTTGGTCT...GACGCTTCGGTGCCTCTGGCTGTTCTGTCCCTCACACCTATAGTAAAAACCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTCATAGGAAGCCAGGGGAAGGGACGCCCATGAGCTGGAGGTTTGGGATGGGGCAGACACACACTCAGTaGGGCATTACTTTTATGAAT | + |
|
Preference number: 2 (lower is better) Translates to: CHRKPGEGTPMSWRFGMGQTHTQ*GITFMN Trigger: ATTCATAAAAGTAATGCCTCACTGAGTGTGTGTCTG...CCCCATCCCAAACCTCCAGCTCATGGGCGTCCCTTCCCCTGGCTTCCTATGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGTACGGCTTCCGCTTTGTGAGGCGAGGTCCCATCTTTGTGAAAGGCAAAGGTGGCCCAGCACATGCTaGTCCAAACCCAAGACTAAA | + |
|
Preference number: 2 (lower is better) Translates to: RVRLPLCEARSHLCERQRWPSTC*SKPKTK Trigger: TTTAGTCTTGGGTTTGGAGCAGCATGTGCTGGGCCA...CCTTTGCCTTTCACAAAGATGGGACCTCGCCTCACAAAGCGGAAGCCGTACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGAGAGGGCATGACCAGCAGGCAGGCCTAAGATGTCAAGAAGCCCTAAGCCGATATCTGTTCTCATGGTaGCATCCAGGCAAGCACTCT | + |
|
Preference number: 2 (lower is better) Translates to: MRGHDQQAGLRCQEALSRYLFSW*HPGKHS Trigger: AGAGTGCTTGCCTGGATGCCACCATGAGAACAGATA...TCGGCTTAGGGCTTCTTGACATCTTAGGCCTGCCTGCTGGTCATGCCCTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGGGAAAGCAGTGGACAGTACATGGCCATCAGACTGCAGTTAGCCATGGGGTGGCAGTATGATGTATaGTCTACTGATGTCACCGTG | + |
|
Preference number: 2 (lower is better) Translates to: GRESSGQYMAIRLQLAMGWQYDV*STDVTV Trigger: CACGGTGACATCAGTAGACCATACATCATACTGCCA...CCCCATGGCTAACTGCAGTCTGATGGCCATGTACTGTCCACTGCTTTCCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR CAA 90 bp | ACTTTGGAGAACTGTTCCAACTGCCCAGTGCCTACAGATACGGACTaGTCTATGTGTACACGCAAGCTCCCTGTCATTCCCATGACGTGG | + |
|
Preference number: 2 (lower is better) Translates to: TLENCSNCPVPTDTD*SMCTRKLPVIPMTW Trigger: CCACGTCATGGGAATGACAGGGAGCTTGCGTGTACACATAGACAAGTCCGTATCTGTAGGCACTGGGCAGTTGGAACAGTTCTCCAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTTCTTCTGGAACCCGTGTCACCTTAGTCACGAGAGCAGAAAGTGCAATATTTGAGCACTGGGCTGAGTaGACAGTGAACAAGCGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: GSSGTRVTLVTRAESAIFEHWAE*TVNKRP Trigger: TGGCCGCTTGTTCACTGTTCACTCAGCCCAGTGCTC...AAATATTGCACTTTCTGCTCTCGTGACTAAGGTGACACGGGTTCCAGAAGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGAGAGGGCATGACCAGCAGGCAGGCCTAAGATGTCAAGAAGCCCTAAGCCGAAAAGGACTTTACGCATaGTGTTCTCTGCCCAACTGT | + |
|
Preference number: 2 (lower is better) Translates to: MRGHDQQAGLRCQEALSRKGLYA*CSLPNC Trigger: ACAGTTGGGCAGAGAACAGCATGCGTAAAGTCCTTT...TCGGCTTAGGGCTTCTTGACATCTTAGGCCTGCCTGCTGGTCATGCCCTCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAGGCACCGAAGCGTCTGGGGCAGGGAGGGAAAGCAGTGGACAGTACATGGCTATATTCAAAACTCTaGCCAAAAACAACCTCATCA | + |
|
Preference number: 2 (lower is better) Translates to: PEAPKRLGQGGKAVDSTWLYSKL*PKTTSS Trigger: TGATGAGGTTGTTTTTGGGCAGAGTTTTGAATATAG...CCATGTACTGTCCACTGCTTTCCCTCCCTGCCCCAGACGCTTCGGTGCCTCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGTGTCTGCCACATGTAGAACACACCAGACACACACTCAGTGAGGCATTACTTAGACTGGAGTGGACATaGGTGTGGGAGTGCACACAG | + |
|
Preference number: 2 (lower is better) Translates to: LCLPHVEHTRHTLSEALLRLEWT*VWECTQ Trigger: CTGTGTGCACTCCCACACGCATGTCCACTCCAGTCT...AAGTAATGCCTCACTGAGTGTGTGTCTGGTGTGTTCTACATGTGGCAGACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAACATTTAAGATTCAGGTTTGGGTGGAAACGGCCTCCGTTCGGTAGAGTTCACTGCCCCACCAAGTaGTGGACAACCCCTGAGCGA | + |
|
Preference number: 2 (lower is better) Translates to: SKHLRFRFGWKRPPFGRVHCPTK*WTTPER Trigger: TCGCTCAGGGGTTGTCCACCACTTGGTGGGGCAGTG...AACTCTACCGAACGGAGGCCGTTTCCACCCAAACCTGAATCTTAAATGTTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR CAA 90 bp | TGGTTAGGTCAATGGCCCTTACCCCACCCACTGTTCCTGATAATCTaGAAAGGTTCTTCTGGAACCCGTGTCACCTTAGTCACGAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: WLGQWPLPHPLFLII*KGSSGTRVTLVTRA Trigger: TGCTCTCGTGACTAAGGTGACACGGGTTCCAGAAGAACCTTTCAAGATTATCAGGAACAGTGGGTGGGGTAAGGGCCATTGACCTAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCATGAACAAAGGAGGGGTTCTGGCTGGCGTCATTGGAGCCCGGAAACCACAAGTCGCCTTTGCTACTaGTTTAACAAAGAATCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: RHEQRRGSGWRHWSPETTSRLCY*FNKESA Trigger: TGCAGATTCTTTGTTAAAGCAGTAGCAAAGGCGACT...TGTGGTTTCCGGGCTCCAATGACGCCAGCCAGAACCCCTCCTTTGTTCATGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTTTTACTATAGGTGTGAGGGACAGAACAGCCAGAGGCACCGAAGCGTCTGGGAAACAACCTCATCATTaGCTCCAAGCCAGAGGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: VFTIGVRDRTARGTEASGKQPHH*LQARGE Trigger: TTCACCTCTGGCTTGGAGGCAATGATGAGGTTGTTT...CCCAGACGCTTCGGTGCCTCTGGCTGTTCTGTCCCTCACACCTATAGTAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGAGGGAAAGCAGTGGACAGTACATGGCCATCAGACTGCAGTTAGCCATGGGGTTTCTGTTCCTGTGTTaGAGCTTTATTCTTCGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GRESSGQYMAIRLQLAMGFLFLC*SFILRP Trigger: AGGACGAAGAATAAAGCTGCAACACAGGAACAGAAA...CCCCATGGCTAACTGCAGTCTGATGGCCATGTACTGTCCACTGCTTTCCCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGGTCCTCTGGAAGAACTGAGCCATTTCTTTAGCCCCTCATCTCATACTCTTGGCAAGGCCTATCTCTaGAGCATGCTCAGGGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SGPLEELSHFFSPSSHTLGKAYL*SMLRVS Trigger: AGAAACCCTGAGCATGCTCCAGAGATAGGCCTTGCC...AAGAGTATGAGATGAGGGGCTAAAGAAATGGCTCAGTTCTTCCAGAGGACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
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| 3UTR-3UTR TCA 90 bp | ATCCACAGGAGTCATGGGCAACATCCAGGTATGTTCAGTACTAGAACTGAGCATTTGGGAAAGGACAAATaGCCAAGTCCTGGTGTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: IHRSHGQHPGMFSTRTEHLGKDK*PSPGVP Trigger: GGGAACACCAGGACTTGGTCATTTGTCCTTTCCCAA...ATGCTCAGTTCTAGTACTGAACATACCTGGATGTTGCCCATGACTCCTGTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAACATTTAAGATTCAGGTTTGGGTGGAAACGGCCTCCGTTCGGTAGAGTTGGGTATCTGTTCTCATaGTGGCATCCAGGCAAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: SKHLRFRFGWKRPPFGRVGYLFS*WHPGKH Trigger: GTGCTTGCCTGGATGCCACCATGAGAACAGATACCC...AACTCTACCGAACGGAGGCCGTTTCCACCCAAACCTGAATCTTAAATGTTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR-3UTR CCA 90 bp | ATACAACCAAGTCAGCACTGGTGCTTACAGGAGGAAGAGATATTCTGGAGCACTAACAAGCGGCCACTTTaGAGAACTGTTCCAACTGCC | + |
|
Preference number: 2 (lower is better) Translates to: IQPSQHWCLQEEEIFWSTNKRPL*RTVPTA Trigger: GGCAGTTGGAACAGTTCTCCAAAGTGGCCGCTTGTT...AGTGCTCCAGAATATCTCTTCCTCCTGTAAGCACCAGTGCTGACTTGGTTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTCTTCTGGAACCCGTGTCACCTTAGTCACGAGAGCAGAAAGTGCAATATTTCAAACGCTGGGCCTGTaGAGTAAAGATCCTATCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GSSGTRVTLVTRAESAIFQTLGL*SKDPIW Trigger: CCAGATAGGATCTTTACTCCACAGGCCCAGCGTTTG...AAATATTGCACTTTCTGCTCTCGTGACTAAGGTGACACGGGTTCCAGAAGAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR-3UTR CCA 90 bp | TACTCATATGAGGAGTGGCCTCACTACTGGGCAAATTTACAGGAGTTTGAAGTAAGCTGCCTTCCCCAATaGCTCCTCTGTTACACTGCC | + |
|
Preference number: 2 (lower is better) Translates to: YSYEEWPHYWANLQEFEVSCLPQ*LLCYTA Trigger: GGCAGTGTAACAGAGGAGCCATTGGGGAAGGCAGCT...TACTTCAAACTCCTGTAAATTTGCCCAGTAGTGAGGCCACTCCTCATATGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR-3UTR CCA 90 bp | ATACAACCAAGTCAGCACTGGTGCTTACAGGAGGAAGAGATATTCTGGAGCACTTATCTGTTCTCATGGTaGCATCCAGGCAAGCACTCT | + |
|
Preference number: 2 (lower is better) Translates to: IQPSQHWCLQEEEIFWSTYLFSW*HPGKHS Trigger: AGAGTGCTTGCCTGGATGCCACCATGAGAACAGATA...AGTGCTCCAGAATATCTCTTCCTCCTGTAAGCACCAGTGCTGACTTGGTTGTAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
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| 3UTR CAA 90 bp | GTCTGTGAGAGAGAAATTGGTAGTTTGTGGAAAGCTAATGCAAGCTaGGCTTGTGGCCATGCTCCATTCCTCTACTCTAGGCATGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: VCEREIGSLWKANAS*ACGHAPFLYSRHEQ Trigger: TTGTTCATGCCTAGAGTAGAGGAATGGAGCATGGCCACAAGCCAAGCTTGCATTAGCTTTCCACAAACTACCAATTTCTCTCTCACAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCACTCAAAACATTTAAGATTCAGGTTTGGGTGGAAACGGCCTCCGTTCGGTCCAAGTCAGCACTGGTaGTTACAGGAGGAAGAGATA | + |
|
Preference number: 2 (lower is better) Translates to: IHSKHLRFRFGWKRPPFGPSQHW*LQEEEI Trigger: TATCTCTTCCTCCTGTAAGCACCAGTGCTGACTTGG...ACCGAACGGAGGCCGTTTCCACCCAAACCTGAATCTTAAATGTTTTGAGTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTCTTCTGGAACCCGTGTCACCTTAGTCACGAGAGCAGAAAGTGCAATATTTATGGCTTACGTTCCATaGATTCTTCCTGGAGTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: GSSGTRVTLVTRAESAIFMAYVP*ILPGVC Trigger: GCAAACTCCAGGAAGAATGCATGGAACGTAAGCCAT...AAATATTGCACTTTCTGCTCTCGTGACTAAGGTGACACGGGTTCCAGAAGAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTATCATGGATTTATAGCTTCCAGGAAAGCTAGAGATGCTTACAAAAGGTCTGGGTATCTGTTCTCATaGTGGCATCCAGGCAAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: PYHGFIASRKARDAYKRSGYLFS*WHPGKH Trigger: GTGCTTGCCTGGATGCCACCATGAGAACAGATACCC...AGACCTTTTGTAAGCATCTCTAGCTTTCCTGGAAGCTATAAATCCATGATAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCACTCAAAACATTTAAGATTCAGGTTTGGGTGGAAACGGCCTCCGTTCGGTAGCACAGAGCCGTGGTaGAAGAGAAAAGGTACATTA | + |
|
Preference number: 2 (lower is better) Translates to: IHSKHLRFRFGWKRPPFGSTEPW*KRKGTL Trigger: TAATGTACCTTTTCTCTTTCACCACGGCTCTGTGCT...ACCGAACGGAGGCCGTTTCCACCCAAACCTGAATCTTAAATGTTTTGAGTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTATCATGGATTTATAGCTTCCAGGAAAGCTAGAGATGCTTACAAAAGGTCTGAGGAAGAGATATTCTaGAGCACTGGGCTGAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: PYHGFIASRKARDAYKRSEEEIF*STGLSE Trigger: TTCACTCAGCCCAGTGCTCCAGAATATCTCTTCCTC...AGACCTTTTGTAAGCATCTCTAGCTTTCCTGGAAGCTATAAATCCATGATAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAGAAATTGGTAGTTTGTGGAAAGCTAATGCAAGCTTGGCTTGTGGCCATCCACAAGCCCTATCATaGATTTATAGCTTCCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: EREIGSLWKANASLACGHPQALS*IYSFQE Trigger: TTCCTGGAAGCTATAAATCCATGATAGGGCTTGTGG...ATGGCCACAAGCCAAGCTTGCATTAGCTTTCCACAAACTACCAATTTCTCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCTGCCCTCTTGGAGATTGTTCATGTGTAGAATGTACAGTAATGGAGTAGTAACAGTCTCTAGGAAATaGGAAGAGGACAGCCATGAC | + |
|
Preference number: 2 (lower is better) Translates to: VLPSWRLFMCRMYSNGVVTVSRK*EEDSHD Trigger: GTCATGGCTGTCCTCTTCCCATTTCCTAGAGACTGT...TACTACTCCATTACTGTACATTCTACACATGAACAATCTCCAAGAGGGCAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR-3UTR CCA 90 bp | TACTCATATGAGGAGTGGCCTCACTACTGGGCAAATTTACAGGAGTTTGAAGTATTTGCCATATATTACTaGCTCCTGCCTGTGGGCATT | + |
|
Preference number: 2 (lower is better) Translates to: YSYEEWPHYWANLQEFEVFAIYY*LLPVGI Trigger: AATGCCCACAGGCAGGAGCCAGTAATATATGGCAAA...TACTTCAAACTCCTGTAAATTTGCCCAGTAGTGAGGCCACTCCTCATATGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCTATCATGGATTTATAGCTTCCAGGAAAGCTAGAGATGCTTACAAAAGGTCTTACCCCCATTCTAGCTaGTTCCAGCAAGAACATATG | + |
|
Preference number: 2 (lower is better) Translates to: PYHGFIASRKARDAYKRSYPHSS*FQQEHM Trigger: CATATGTTCTTGCTGGAATCAGCTAGAATGGGGGTA...AGACCTTTTGTAAGCATCTCTAGCTTTCCTGGAAGCTATAAATCCATGATAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAAACATTTAAGATTCAGGTTTGGGTGGAAACGGCCTCCGTTCGGTAGAGTTAAGTGTGTTCATTTCTaGTGTCCCCCAAATAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SKHLRFRFGWKRPPFGRVKCVHF*CPPNRE Trigger: TTCTCTATTTGGGGGACAGCAGAAATGAACACACTT...AACTCTACCGAACGGAGGCCGTTTCCACCCAAACCTGAATCTTAAATGTTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGACTTTACGCATGCTGTTCTCTGCCCAACTGTTTTAGGAAACATTAAATACGAGGAAGAGATATTCTaGAGCACTGGGCTGAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: KDFTHAVLCPTVLGNIKYEEEIF*STGLSE Trigger: TTCACTCAGCCCAGTGCTCCAGAATATCTCTTCCTC...GTATTTAATGTTTCCTAAAACAGTTGGGCAGAGAACAGCATGCGTAAAGTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR-3UTR GCA 90 bp | CACAAGCCCTATCATGGATTTATAGCTTCCAGGAAAGCTAGAGATGCTTACAAAAAGTGTGTTCATTTCTaGTGTCCCCCAAATAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: HKPYHGFIASRKARDAYKKCVHF*CPPNRE Trigger: TTCTCTATTTGGGGGACAGCAGAAATGAACACACTT...TTTGTAAGCATCTCTAGCTTTCCTGGAAGCTATAAATCCATGATAGGGCTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR TCA 72 bp | GTGCTGGGGGCGGGGAGCTCCGGTTGGGCTCAGGGCTaGGGAGGCTCTGCACCCGGCTGCTCCTTCCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VLGAGSSGWAQG*GGSAPGCSFLS Trigger: AGACAGGAAGGAGCAGCCGGGTGCAGAGCCTCCTCAGCCCTGAGCCCAACCGGAGCTCCCCGCCCCCAGCAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR GCA 72 bp | AGCAGGATGCCAGCCGAGGCGGAACGAAGCTGCCTGTaGTGGGGGCGGGGAGCTCCGGTTGGGCTCAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SRMPAEAERSCL*WGRGAPVGLRA Trigger: AGCCCTGAGCCCAACCGGAGCTCCCCGCCCCCAGCACAGGCAGCTTCGTTCCGCCTCGGCTGGCATCCTGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | AGGATGCCAGCCGAGGCGGAACGAAGCTGCCTGTGCTaGGGGCGGGGAGCTCCGGTTGGGCTCAGGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RMPAEAERSCLC*GRGAPVGLRAE Trigger: CTCAGCCCTGAGCCCAACCGGAGCTCCCCGCCCCCAGCACAGGCAGCTTCGTTCCGCCTCGGCTGGCATCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | CTGGGGGAGGAATCCACCTGTGAGGGCAAAGGCTGCTaGGCACCGCACGATGGCATGCCTCACCCAGCACCG | + |
|
Preference number: 3 (lower is better) Translates to: LGEESTCEGKGC*APHDGMPHPAP Trigger: CGGTGCTGGGTGAGGCATGCCATCGTGCGGTGCCCAGCAGCCTTTGCCCTCACAGGTGGATTCCTCCCCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR TCA 72 bp | CTCAGCCCTTCACCCCTAGAGAGGCCATGGCCACTGTaGGCAGGATGCCAGCCGAGGCGGAACGAAGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSPSPLERPWPL*AGCQPRRNEAA Trigger: GGCAGCTTCGTTCCGCCTCGGCTGGCATCCTGCTCACAGTGGCCATGGCCTCTCTAGGGGTGAAGGGCTGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR GCA 72 bp | GTGAGGGCAAAGGCTGCTGGGCACCGCACGATGGCATaGCTCACCCAGCACCGCTTCTCTGTGACTGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VRAKAAGHRTMA*LTQHRFSVTGR Trigger: CCTGCCAGTCACAGAGAAGCGGTGCTGGGTGAGGCATGCCATCGTGCGGTGCCCAGCAGCCTTTGCCCTCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR TCA 72 bp | TCTAGGCCCTCTCAGTCTGGGGGAGGAATCCACCTGTaGGGGCAAAGGCTGCTGGGCACCGCACGATGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SRPSQSGGGIHL*GQRLLGTARWH Trigger: ATGCCATCGTGCGGTGCCCAGCAGCCTTTGCCCTCACAGGTGGATTCCTCCCCCAGACTGAGAGGGCCTAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR GCA 72 bp | CTGTCTCTGGGGCAGGCAAGGCCTATCTCTGGAGCATaGTCAGGGTTTCTCATTGCGCCGCAGGCGCGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSLGQARPISGA*SGFLIAPQARA Trigger: TGCACGCGCCTGCGGCGCAATGAGAAACCCTGAGCATGCTCCAGAGATAGGCCTTGCCTGCCCCAGAGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| 3UTR GCA 72 bp | GGCCAGCTGCCTTCCCCAATGGCTCCTCTGTTACACTaGCCCACCAAGTGGTGGACAACCCCTGAGCGACCT | + |
|
Preference number: 3 (lower is better) Translates to: GQLPSPMAPLLH*PTKWWTTPERP Trigger: AGGTCGCTCAGGGGTTGTCCACCACTTGGTGGGGCAGTGTAACAGAGGAGCCATTGGGGAAGGCAGCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR TCA 72 bp | GCACGATGGCATGCCTCACCCAGCACCGCTTCTCTGTaGCTGGCAGGTACGTGCGGGAGAAGACCAAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: ARWHASPSTASL*LAGTCGRRPRL Trigger: CAGTCTTGGTCTTCTCCCGCACGTACCTGCCAGTCACAGAGAAGCGGTGCTGGGTGAGGCATGCCATCGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR CCA 72 bp | CTGCTGTCTGTCTCTGGGGCAGGCAAGGCCTATCTCTaGAGCATGCTCAGGGTTTCTCATTGCGCCGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLSVSGAGKAYL*SMLRVSHCAAG Trigger: GCCTGCGGCGCAATGAGAAACCCTGAGCATGCTCCAGAGATAGGCCTTGCCTGCCCCAGAGACAGACAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| 3UTR CCA 72 bp | CTGAGGAGGCTCTGCACCCGGCTGCTCCTTCCTGTCTaGTTAGGTCAATGGCCCTTACCCCACCCACTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LRRLCTRLLLPV*LGQWPLPHPLF Trigger: GAACAGTGGGTGGGGTAAGGGCCATTGACCTAACCAGACAGGAAGGAGCAGCCGGGTGCAGAGCCTCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | TGTGAGGGACAGAACAGCCAGAGGCACCGAAGCGTCTaGGGCAGGGAGGGAAAGCAGTGGACAGTACATGGC | + |
|
Preference number: 3 (lower is better) Translates to: CEGQNSQRHRSV*GREGKQWTVHG Trigger: GCCATGTACTGTCCACTGCTTTCCCTCCCTGCCCCAGACGCTTCGGTGCCTCTGGCTGTTCTGTCCCTCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR CCA 72 bp | CTGGAGTCACTCGCCCCAGTACCAGTCAGTGCTATGTaGTCTGCTGTCTGTCTCTGGGGCAGGCAAGGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LESLAPVPVSAM*SAVCLWGRQGL Trigger: TAGGCCTTGCCTGCCCCAGAGACAGACAGCAGACCACATAGCACTGACTGGTACTGGGGCGAGTGACTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| 3UTR CCA 72 bp | GATGGCATGCCTCACCCAGCACCGCTTCTCTGTGACTaGCAGGTACGTGCGGGAGAAGACCAAGACTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: DGMPHPAPLLCD*QVRAGEDQDWS Trigger: ACTCCAGTCTTGGTCTTCTCCCGCACGTACCTGCCAGTCACAGAGAAGCGGTGCTGGGTGAGGCATGCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR TCA 72 bp | TCTGTTACACTGCCCCACCAAGTGGTGGACAACCCCTaGGCGACCTCTGGCTCCACAGTGGTCCACATAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SVTLPHQVVDNP*ATSGSTVVHIG Trigger: TCCTATGTGGACCACTGTGGAGCCAGAGGTCGCTCAGGGGTTGTCCACCACTTGGTGGGGCAGTGTAACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR GCA 72 bp | AAGGCCTATCTCTGGAGCATGCTCAGGGTTTCTCATTaGGCCGCAGGCGCGTGCACATTTCCCAGAGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: KAYLWSMLRVSH*AAGACTFPRAP Trigger: TGGTGCTCTGGGAAATGTGCACGCGCCTGCGGCGCAATGAGAAACCCTGAGCATGCTCCAGAGATAGGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| 3UTR GCA 72 bp | GTCACTCGCCCCAGTACCAGTCAGTGCTATGTGGTCTaGTGTCTGTCTCTGGGGCAGGCAAGGCCTATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VTRPSTSQCYVV*CLSLGQARPIS Trigger: AGAGATAGGCCTTGCCTGCCCCAGAGACAGACAGCAGACCACATAGCACTGACTGGTACTGGGGCGAGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| 3UTR CCA 72 bp | AGGCACCGAAGCGTCTGGGGCAGGGAGGGAAAGCAGTaGACAGTACATGGCCATCAGACTGCAGTTAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RHRSVWGREGKQ*TVHGHQTAVSH Trigger: ATGGCTAACTGCAGTCTGATGGCCATGTACTGTCCACTGCTTTCCCTCCCTGCCCCAGACGCTTCGGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR GCA 72 bp | ATATACCCTGGAGTCACTCGCCCCAGTACCAGTCAGTaGTATGTGGTCTGCTGTCTGTCTCTGGGGCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: IYPGVTRPSTSQ*YVVCCLSLGQA Trigger: TGCCTGCCCCAGAGACAGACAGCAGACCACATAGCACTGACTGGTACTGGGGCGAGTGACTCCAGGGTATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| 3UTR CCA 72 bp | GTACCAGTCAGTGCTATGTGGTCTGCTGTCTGTCTCTaGGGCAGGCAAGGCCTATCTCTGGAGCATGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VPVSAMWSAVCL*GRQGLSLEHAQ Trigger: CTGAGCATGCTCCAGAGATAGGCCTTGCCTGCCCCAGAGACAGACAGCAGACCACATAGCACTGACTGGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| 3UTR GCA 72 bp | GAGTTTGATGTGGAGCCTGGTGATGGGGGCAGTCGCTaGGACTACCTAGATGAGAAGGGCATCGAAACCTAC | + |
|
Preference number: 3 (lower is better) Translates to: EFDVEPGDGGSR*DYLDEKGIETY Trigger: GTAGGTTTCGATGCCCTTCTCATCTAGGTAGTCGCAGCGACTGCCCCCATCACCAGGCTCCACATCAAACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| 3UTR CCA 72 bp | ATTACTGGCTCCTGCCTGTGGGCATTAGGTCAGTGTTaGCAGTGCCACAGGGCCAAGGAAACATGGACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ITGSCLWALGQC*QCHRAKETWTE Trigger: CTCAGTCCATGTTTCCTTGGCCCTGTGGCACTGCCAACACTGACCTAATGCCCACAGGCAGGAGCCAGTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | TTGGGATGGGGTGGGGTGAGAGCCAGGATGCCGGCATaGACTCTGGAACAGATACTCACAATGCTGAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LGWGGVRARMPA*TLEQILTMLKE Trigger: TTCTTTCAGCATTGTGAGTATCTGTTCCAGAGTCCATGCCGGCATCCTGGCTCTCACCCCACCCCATCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR TCA 72 bp | TCTGGTGTGTTACCTGTCCCCCATGCCTGTCATCACTaGATCTGGACCCTAGCCTCCATTAACCCTAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SGVLPVPHACHH*IWTLASINPSA Trigger: TGCACTAGGGTTAATGGAGGCTAGGGTCCAGATTCAGTGATGACAGGCATGGGGGACAGGTAACACACCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR GCA 72 bp | TCCAAACCTGTTAGGGGACCCATGGCTTACGTTCCATaGATTCTTCCTGGAGTTTGCTGGAGCTCCGACACA | + |
|
Preference number: 3 (lower is better) Translates to: SKPVRGPMAYVP*ILPGVCWSSDT Trigger: TGTGTCGGAGCTCCAGCAAACTCCAGGAAGAATGCATGGAACGTAAGCCATGGGTCCCCTAACAGGTTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | ATGTGTACACGCAAGCTCCCTGTCATTCCCATGACGTaGGTATCTGTTCTCATGGTGGCATCCAGGCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: MCTRKLPVIPMT*VSVLMVASRQA Trigger: TGCTTGCCTGGATGCCACCATGAGAACAGATACCCACGTCATGGGAATGACAGGGAGCTTGCGTGTACACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | ATGTATGGTCTACTGATGTCACCGTGGCAAACAAGATaGAGGCTGGTGGCATCCCAGGGTGAGTACTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: MYGLLMSPWQTR*RLVASQGEYSF Trigger: GAAGGAGTACTCACCCTGGGATGCCACCAGCCTCCATCTTGTTTGCCACGGTGACATCAGTAGACCATACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR TCA 72 bp | GCAAGCACTCTCCCAACAGCTTTTGCTGACTGGTCCTaGACTGGAGGCAGCACAAGTGTGTTCATTTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ASTLPTAFADWS*TGGSTSVFISA Trigger: AGCAGAAATGAACACACTTGTGCTGCCTCCAGTTCAGGACCAGTCAGCAAAAGCTGTTGGGAGAGTGCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR GCA 72 bp | TTGAATGCAGGGAGTCCAACACAAGTAGAAGCCTGGTaGTTTGCCATATATTACTGGCTCCTGCCTGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LNAGSPTQVEAW*FAIYYWLLPVG Trigger: GCCCACAGGCAGGAGCCAGTAATATATGGCAAAGCACCAGGCTTCTACTTGTGTTGGACTCCCTGCATTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR TCA 72 bp | TGCCGGCATGGACTCTGGAACAGATACTCACAATGCTaGAAGAACATGGAAGCCAGCATGCCCTTTGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: CRHGLWNRYSQC*KNMEASMPFGM Trigger: CATACCAAAGGGCATGCTGGCTTCCATGTTCTTTCAGCATTGTGAGTATCTGTTCCAGAGTCCATGCCGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR GCA 72 bp | ATGTCAAGAAGCCCTAAGCCGAGGAACAACACACACTaGACAGCACAGAGCCGTGGTGAAAGAGAAAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: MSRSPKPRNNTH*TAQSRGEREKV Trigger: TACCTTTTCTCTTTCACCACGGCTCTGTGCTGTGCAGTGTGTGTTGTTCCTCGGCTTAGGGCTTCTTGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | TGCTGCTTAAGTGACTGCCTGTGGGTCTCCCTTATGTaGGGCTGTATCTACATACTGCTACTGAGCTTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: CCLSDCLWVSLM*GCIYILLLSFY Trigger: GTAGAAGCTCAGTAGCAGTATGTAGATACAGCCCCACATAAGGGAGACCCACAGGCAGTCACTTAAGCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | ACACAAGTAGAAGCCTGGTGCTTTGCCATATATTACTaGCTCCTGCCTGTGGGCATTAGGTCAGTGTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TQVEAWCFAIYY*LLPVGIRSVLA Trigger: TGCCAACACTGACCTAATGCCCACAGGCAGGAGCCAGTAATATATGGCAAAGCACCAGGCTTCTACTTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | GGTTTGAATGCAGGGAGTCCAACACAAGTAGAAGCCTaGTGCTTTGCCATATATTACTGGCTCCTGCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GLNAGSPTQVEA*CFAIYYWLLPV Trigger: CACAGGCAGGAGCCAGTAATATATGGCAAAGCACCAGGCTTCTACTTGTGTTGGACTCCCTGCATTCAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGTTTTTACTATAGGTGTGAGGGACAGAACAGCCAGAGGCACCGAAGCGTCCTTTCTGTTCCTGTGTaGCAGCTTTATTCTTCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QGFYYRCEGQNSQRHRSVLSVPV*QLYSSS Trigger: GGACGAAGAATAAAGCTGCAACACAGGAACAGAAAG...GACGCTTCGGTGCCTCTGGCTGTTCTGTCCCTCACACCTATAGTAAAAACCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR TCA 72 bp | GTGTTCCTATTAGCAGCCTTGTGGGCGGGGGTTAGATaGTCGTCTGTGAGAGAGAAATTGGTAGTTTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VFLLAALWAGVR*SSVREKLVVCG Trigger: TCCACAAACTACCAATTTCTCTCTCACAGACGATCATCTAACCCCCGCCCACAAGGCTGCTAATAGGAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR GCA 72 bp | TTGAACCTGTATCAGTGCCATGAAATGGTAGTCTGCTaGTTAAGTGACTGCCTGTGGGTCTCCCTTATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LNLYQCHEMVVC*LSDCLWVSLMW Trigger: CCACATAAGGGAGACCCACAGGCAGTCACTTAAGCAGCAGACTACCATTTCATGGCACTGATACAGGTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR GCA 72 bp | GTCTTGAACCTGTATCAGTGCCATGAAATGGTAGTCTaGTGCTTAAGTGACTGCCTGTGGGTCTCCCTTATG | + |
|
Preference number: 3 (lower is better) Translates to: VLNLYQCHEMVV*CLSDCLWVSLM Trigger: CATAAGGGAGACCCACAGGCAGTCACTTAAGCAGCAGACTACCATTTCATGGCACTGATACAGGTTCAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | CCACCCACTGTTCCTGATAATCTTGAAAGGTTCTTCTaGAACCCGTGTCACCTTAGTCACGAGAGCAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PPTVPDNLERFF*NPCHLSHESRK Trigger: CTTTCTGCTCTCGTGACTAAGGTGACACGGGTTCCAGAAGAACCTTTCAAGATTATCAGGAACAGTGGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | TCCCCCAAGGTTTGTGCCAGCTACTCATATGAGGAGTaGCCTCACTACTGGGCAAATTTACAGGAGTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SPKVCASYSYEE*PHYWANLQEFE Trigger: TTCAAACTCCTGTAAATTTGCCCAGTAGTGAGGCCACTCCTCATATGAGTAGCTGGCACAAACCTTGGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAAGCTAGAGATGCTTACAAAAGGTCTTCAGTTACCCCCATTCTAGCTGATCTCTCCCAACAGCTTTaGCTGACTGGTCCTGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: RKARDAYKRSSVTPILADLSQQL*LTGPEL Trigger: CAGTTCAGGACCAGTCAGCAAAAGCTGTTGGGAGAG...ATCAGCTAGAATGGGGGTAACTGAAGACCTTTTGTAAGCATCTCTAGCTTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR GCA 72 bp | AGCAAGAACATATGCATACAACCAAGTCAGCACTGGTaGTTACAGGAGGAAGAGATATTCTGGAGCACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SKNICIQPSQHW*LQEEEIFWSTG Trigger: CCCAGTGCTCCAGAATATCTCTTCCTCCTGTAAGCACCAGTGCTGACTTGGTTGTATGCATATGTTCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR GCA 72 bp | GTTACCCCCATTCTAGCTGATTCCAGCAAGAACATATaGATACAACCAAGTCAGCACTGGTGCTTACAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VTPILADSSKNI*IQPSQHWCLQE Trigger: CTCCTGTAAGCACCAGTGCTGACTTGGTTGTATGCATATGTTCTTGCTGGAATCAGCTAGAATGGGGGTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | GAGAAATTGGTAGTTTGTGGAAAGCTAATGCAAGCTTaGCTTGTGGCCATGCTCCATTCCTCTACTCTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: EKLVVCGKLMQA*LVAMLHSSTLG Trigger: GCCTAGAGTAGAGGAATGGAGCATGGCCACAAGCCAAGCTTGCATTAGCTTTCCACAAACTACCAATTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | GGTAGGGGAGCCAGAGGACCTTTAGTTCTGCCCTCTTaGAGATTGTTCATGTGTAGAATGTACAGTAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: GRGARGPLVLPS*RLFMCRMYSNG Trigger: TCCATTACTGTACATTCTACACATGAACAATCTCCAAGAGGGCAGAACTAAAGGTCCTCTGGCTCCCCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR TCA 72 bp | GAGGAACAACACACACTGCACAGCACAGAGCCGTGGTaGAAGAGAAAAGGTACATTAACAGTCTCTAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: EEQHTLHSTEPW*KRKGTLTVSRK Trigger: TTTCCTAGAGACTGTTAATGTACCTTTTCTCTTTCACCACGGCTCTGTGCTGTGCAGTGTGTGTTGTTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | CATGAACCTTTTATTCCAAACCTGTTAGGGGACCCATaGCTTACGTTCCATGCATTCTTCCTGGAGTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: HEPFIPNLLGDP*LTFHAFFLEFA Trigger: AGCAAACTCCAGGAAGAATGCATGGAACGTAAGCCATGGGTCCCCTAACAGGTTTGGAATAAAAGGTTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | TGTGCCAGCTACTCATATGAGGAGTGGCCTCACTACTaGGCAAATTTACAGGAGTTTGAAGTATTAGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: CASYSYEEWPHY*ANLQEFEVLGR Trigger: CCTTCCTAATACTTCAAACTCCTGTAAATTTGCCCAGTAGTGAGGCCACTCCTCATATGAGTAGCTGGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR TCA 72 bp | ATTGAAGCTGGCCACTATAGTCCTGAGAGACAGTTGTaGAGGAATTTTTACCAAGGGACACAGGTGTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: IEAGHYSPERQL*RNFYQGTQVFL Trigger: TAGGAACACCTGTGTCCCTTGGTAAAAATTCCTTCACAACTGTCTCTCAGGACTATAGTGGCCAGCTTCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR GCA 72 bp | CCCCAGGAGCAGTATTCCTACTTTCTGTTCCTGTGTTaGAGCTTTATTCTTCGTCCTATATTCAAAACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PQEQYSYFLFLC*SFILRPIFKTL Trigger: CAGAGTTTTGAATATAGGACGAAGAATAAAGCTGCAACACAGGAACAGAAAGTAGGAATACTGCTCCTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR CCA 72 bp | GTGAAAAGCTTTGGGAAAGGACAAATGACCAAGTCCTaGTGTTCCCAATTATTGAAGCGCACATTCCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: VKSFGKGQMTKS*CSQLLKRTFHR Trigger: TCTATGGAATGTGCGCTTCAATAATTGGGAACACCAGGACTTGGTCATTTGTCCTTTCCCAAAGCTTTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR TCA 72 bp | TGCTTACAAAAGGTCTTCAGTTACCCCCATTCTAGCTaGTTCCAGCAAGAACATATGCATACAACCAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CLQKVFSYPHSS*FQQEHMHTTKS Trigger: TGACTTGGTTGTATGCATATGTTCTTGCTGGAATCAGCTAGAATGGGGGTAACTGAAGACCTTTTGTAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTGCCCTCTTGGAGATTGTTCATGTGTAGAATGTACAGTAATGGAGTAGTAAGAGAAATTGGTAGTTaGTGGAAAGCTAATGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VLPSWRLFMCRMYSNGVVREIGS*WKANAS Trigger: GCTTGCATTAGCTTTCCACAAACTACCAATTTCTCT...TACTACTCCATTACTGTACATTCTACACATGAACAATCTCCAAGAGGGCAGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR CCA 72 bp | TTATTAAAAGCTTTACTCAACTTGATGAGACTGTTGTaGCAATTCTGTTACTGTGACACAGACCATGAACCT | + |
|
Preference number: 3 (lower is better) Translates to: LLKALLNLMRLL*QFCYCDTDHEP Trigger: AGGTTCATGGTCTGTGTCACAGTAACAGAATTGCCACAACAGTCTCATCAAGTTGAGTAAAGCTTTTAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR CAA 72 bp | CAAGGCCTATCTCTGGAGCATGCTCAGGGTTTCTCATaGCGCCGCAGGCGCGTGCACATTTCCCAGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: QGLSLEHAQGFS*RRRRVHISQST Trigger: GGTGCTCTGGGAAATGTGCACGCGCCTGCGGCGCAATGAGAAACCCTGAGCATGCTCCAGAGATAGGCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| CDS-3UTR CCA 90 bp | CCAGTACCAGTCAGTGCTATGTGGTCTGCTGTCTGTCTCTGGGGCAGGCAAGGCGATCACGGTTCTGCTTaGGTCTTCTTTGGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVPVSAMWSAVCLWGRQGDHGSA*VFFGRR Trigger: CCTCCTGCCAAAGAAGACCCAAGCAGAACCGTGATC...GCCTTGCCTGCCCCAGAGACAGACAGCAGACCACATAGCACTGACTGGTACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGGCCTATCTCTGGAGCATGCTCAGGGTTTCTCATTGCGCCGCAGGCGCGTCCAATTCTCAAGTTaGTCTGCCTGGTACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQGLSLEHAQGFSLRRRRVQFSS*SAWYFL Trigger: GAGGAAGTACCAGGCAGACCAACTTGAGAATTGGAC...GCGCCTGCGGCGCAATGAGAAACCCTGAGCATGCTCCAGAGATAGGCCTTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| 3UTR CAA 72 bp | ATGGTGGCATCCAGGCAAGCACTCTCCCAACAGCTTTaGCTGACTGGTCCTGAACTGGAGGCAGCACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MVASRQALSQQL*LTGPELEAAQV Trigger: CACTTGTGCTGCCTCCAGTTCAGGACCAGTCAGCAAAAGCTGTTGGGAGAGTGCTTGCCTGGATGCCACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| CDS-3UTR TCA 90 bp | GGGACCAAAGCTCAGAGCACTGGGCTCTGTGCTGCCCATACAGTTAGCCAACAGGGAGTGGTTTCTCTATaGCGAGGTCCACAAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTKAQSTGLCAAHTVSQQGVVSL*RGPQSR Trigger: CCTACTTTGTGGACCTCGTCATAGAGAAACCACTCC...CTGTTGGCTAACTGTATGGGCAGCACAGAGCCCAGTGCTCTGAGCTTTGGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| CDS-3UTR GCA 90 bp | CTATGTGGTCTGCTGTCTGTCTCTGGGGCAGGCAAGGCCTATCTCTGGAGCATGCTCCTTTGCACTTCCTaGCTGGACACAAAGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: LCGLLSVSGAGKAYLWSMLLCTS*LDTKYL Trigger: CAAATACTTTGTGTCCAGGCAGGAAGTGCAAAGGAG...CATGCTCCAGAGATAGGCCTTGCCTGCCCCAGAGACAGACAGCAGACCACATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| CDS-3UTR CCA 90 bp | TCACTCGCCCCAGTACCAGTCAGTGCTATGTGGTCTGCTGTCTGTCTCTGGGGCTTTGCACTTCCTGCCTaGACACAAAGTATTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLAPVPVSAMWSAVCLWGFALPA*TQSICR Trigger: TCTGCAAATACTTTGTGTCCAGGCAGGAAGTGCAAA...GCCCCAGAGACAGACAGCAGACCACATAGCACTGACTGGTACTGGGGCGAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGTCGCTGCGACTACCTAGATGAGAAGGGCATCGAAACCTACCTCATCATTTCTTTTCCAGAGGGATaGAGACTGGGACGGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSRCDYLDEKGIETYLIISFPEG*RLGRNG Trigger: ACCATTCCGTCCCAGTCTTCATCCCTCTGGAAAAGA...AATGATGAGGTAGGTTTCGATGCCCTTCTCATCTAGGTAGTCGCAGCGACTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| 3UTR CAA 72 bp | AACTGTTCCAACTGCCCAGTGCCTACAGATACGGACTaGTCTATGTGTACACGCAAGCTCCCTGTCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NCSNCPVPTDTD*SMCTRKLPVIP Trigger: GGGAATGACAGGGAGCTTGCGTGTACACATAGACAAGTCCGTATCTGTAGGCACTGGGCAGTTGGAACAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGGCATCGAAACCTACCTCATCATTGCCTCCAAGCCAGAGGTGAAGAAAACCCACTGCTTCACTTCTaGCCTCAGCTTATCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EGHRNLPHHCLQARGEENPLLHF*PQLISL Trigger: CAACGAGATAAGCTGAGGGCAGAAGTGAAGCAGTGG...GTTTTCTTCACCTCTGGCTTGGAGGCAATGATGAGGTAGGTTTCGATGCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| CDS-3UTR CCA 90 bp | CAAGGTTTTTACTATAGGTGTGAGGGACAGAACAGCCAGAGGCACCGAAGCGTCGTCCAATTCTCAAGTTaGTCTGCCTGGTACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGFYYRCEGQNSQRHRSVVQFSS*SAWYFL Trigger: GAGGAAGTACCAGGCAGACCAACTTGAGAATTGGAC...GACGCTTCGGTGCCTCTGGCTGTTCTGTCCCTCACACCTATAGTAAAAACCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| 3UTR CAA 72 bp | ACCCATGGCTTACGTTCCATGCATTCTTCCTGGAGTTaGCTGGAGCTCCGACACATGGAGATTTCTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: THGLRSMHSSWS*LELRHMEISRK Trigger: CTTCCTAGAAATCTCCATGTGTCGGAGCTCCAGCAAACTCCAGGAAGAATGCATGGAACGTAAGCCATGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR CAA 72 bp | CAATGGCCCTTACCCCACCCACTGTTCCTGATAATCTaGAAAGGTTCTTCTGGAACCCGTGTCACCTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QWPLPHPLFLII*KGSSGTRVTLV Trigger: GACTAAGGTGACACGGGTTCCAGAAGAACCTTTCAAGATTATCAGGAACAGTGGGTGGGGTAAGGGCCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| CDS-3UTR TCA 90 bp | GCATACAACCAAGTCAGCACTGGTGCTTACAGGAGGAAGAGATATTCTGGAGCATCTTTTCCAGAGGGATaGAGACTGGGACGGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: AYNQVSTGAYRRKRYSGASFPEG*RLGRNG Trigger: ACCATTCCGTCCCAGTCTTCATCCCTCTGGAAAAGA...TGCTCCAGAATATCTCTTCCTCCTGTAAGCACCAGTGCTGACTTGGTTGTATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGACTGGTCCTGAACTGGAGGCAGCACAAGTGTGTTCATTTCTGCTGTCCGTTCCACTTTATAGGTaGACGACAGCAAGTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLTGPELEAAQVCSFLLSVPLYR*TTASCT Trigger: TGTGCAACTTGCTGTCGTTCACCTATAAAGTGGAAC...GGACAGCAGAAATGAACACACTTGTGCTGCCTCCAGTTCAGGACCAGTCAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGAGAAATTGGTAGTTTGTGGAAAGCTAATGCAAGCTTGGCTTGTGGCCATCTGGCCTTGTCACAGTaGCATTCGTGGGAAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EREIGSLWKANASLACGHLALSQ*HSWEEL Trigger: CAGCTCTTCCCACGAATGTCACTGTGACAAGGCCAG...ATGGCCACAAGCCAAGCTTGCATTAGCTTTCCACAAACTACCAATTTCTCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| CDS-3UTR TCA 90 bp | TTGATCCCTACCAAATATACCCTGGAGTCACTCGCCCCAGTACCAGTCAGTGCTTCTAGTCTTTCCAGGTaGGCTAAAACACCTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LIPTKYTLESLAPVPVSASSLSR*AKTPPL Trigger: CAAAGGAGGTGTTTTAGCTCACCTGGAAAGACTAGA...AGCACTGACTGGTACTGGGGCGAGTGACTCCAGGGTATATTTGGTAGGGATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| CDS-3UTR TCA 90 bp | GGAGGCAGCACAAGTGTGTTCATTTCTGCTGTCCCCCAAATAGAGAAACAGTTTGGAGTGGTTTCTCTATaGCGAGGTCCACAAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGSTSVFISAVPQIEKQFGVVSL*RGPQSR Trigger: CCTACTTTGTGGACCTCGTCATAGAGAAACCACTCC...AAACTGTTTCTCTATTTGGGGGACAGCAGAAATGAACACACTTGTGCTGCCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| CDS-3UTR TCA 90 bp | AGAACATATGCATACAACCAAGTCAGCACTGGTGCTTACAGGAGGAAGAGATATCTGGCCTTGTCACAGTaGCATTCGTGGGAAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTYAYNQVSTGAYRRKRYLALSQ*HSWEEL Trigger: CAGCTCTTCCCACGAATGTCACTGTGACAAGGCCAG...ATATCTCTTCCTCCTGTAAGCACCAGTGCTGACTTGGTTGTATGCATATGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTGAAGCCCAAACGCTGGGCCTGTGGAGTAAAGATCCTATCTGGGACTAACGGTTTCTTTGGAAAATaGAGCAAACACCTTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVKPKRWACGVKILSGTNGFFGK*SKHLVQ Trigger: CTGCACAAGGTGTTTGCTTCATTTTCCAAAGAAACC...GTTAGTCCCAGATAGGATCTTTACTCCACAGGCCCAGCGTTTGGGCTTCACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTATGTGGGTGTGCATACATGTTGTGCAGATACCTACAGAGACCAGAGGCACTAAAACACCTCCTTTaGACTTCCTGCCTGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: SVCGCAYMLCRYLQRPEALKHLL*TSCLDT Trigger: TGTGTCCAGGCAGGAAGTGCAAAGGAGGTGTTTTAG...TGCCTCTGGTCTCTGTAGGTATCTGCACAACATGTATGCACACCCACATACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| CDS-3UTR GCA 90 bp | GGTTCTTCTGGAACCCGTGTCACCTTAGTCACGAGAGCAGAAAGTGCAATATTTCCACTGCTTCACTTCTaGCCTCAGCTTATCTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSSGTRVTLVTRAESAIFPLLHF*PQLISL Trigger: CAACGAGATAAGCTGAGGGCAGAAGTGAAGCAGTGG...AAATATTGCACTTTCTGCTCTCGTGACTAAGGTGACACGGGTTCCAGAAGAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| CDS-3UTR TCA 90 bp | ATTCACTCAAAACATTTAAGATTCAGGTTTGGGTGGAAACGGCCTCCGTTCGGTGGAGTGGTTTCTCTATaGCGAGGTCCACAAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: IHSKHLRFRFGWKRPPFGGVVSL*RGPQSR Trigger: CCTACTTTGTGGACCTCGTCATAGAGAAACCACTCC...ACCGAACGGAGGCCGTTTCCACCCAAACCTGAATCTTAAATGTTTTGAGTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGTTACTGTGACACAGACCATGAACCTTTTATTCCAAACCTGTTAGGGGACGATCACGGTTCTGCTTaGGTCTTCTTTGGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FCYCDTDHEPFIPNLLGDDHGSA*VFFGRR Trigger: CCTCCTGCCAAAGAAGACCCAAGCAGAACCGTGATC...GTCCCCTAACAGGTTTGGAATAAAAGGTTCATGGTCTGTGTCACAGTAACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR CAA 72 bp | CCAGGTATGTTCAGTACTAGAACTGAGCATGTTGGTTaGAATGCAGGGAGTCCAACACAAGTAGAAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGMFSTRTEHVG*NAGSPTQVEAW Trigger: CCAGGCTTCTACTTGTGTTGGACTCCCTGCATTCAAACCAACATGCTCAGTTCTAGTACTGAACATACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR CAA 72 bp | AGAGAAATTGGTAGTTTGTGGAAAGCTAATGCAAGCTaGGCTTGTGGCCATGCTCCATTCCTCTACTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: REIGSLWKANAS*ACGHAPFLYSR Trigger: CCTAGAGTAGAGGAATGGAGCATGGCCACAAGCCAAGCTTGCATTAGCTTTCCACAAACTACCAATTTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCTTCTGGAACCCGTGTCACCTTAGTCACGAGAGCAGAAAGTGCAATATTTGAGACCAGGTTCAAATaGAGCTTTTCGGTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSSGTRVTLVTRAESAIFETRFK*SFSVSL Trigger: CAAAGAAACCGAAAAGCTGCATTTGAACCTGGTCTC...AAATATTGCACTTTCTGCTCTCGTGACTAAGGTGACACGGGTTCCAGAAGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGCTAGAGATGCTTACAAAAGGTCTTCAGTTACCCCCATTCTAGCTGATAAGTCACTCTCAAGTTaGTCTGCCTGGTACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKARDAYKRSSVTPILADKSLSS*SAWYFL Trigger: GAGGAAGTACCAGGCAGACCAACTTGAGAGTGACTT...ATCAGCTAGAATGGGGGTAACTGAAGACCTTTTGTAAGCATCTCTAGCTTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR CAA 72 bp | AGGGCCAAGGAAACATGGACTGAGGCCTCTAAGGCTTaGATTCACTCAAAACATTTAAGATTCAGGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RAKETWTEASKA*IHSKHLRFRFG Trigger: CCCAAACCTGAATCTTAAATGTTTTGAGTGAATCAAAGCCTTAGAGGCCTCAGTCCATGTTTCCTTGGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR CAA 72 bp | GGAGCCAGAGGACCTTTAGTTCTGCCCTCTTGGAGATaGTTCATGTGTAGAATGTACAGTAATGGAGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GARGPLVLPSWR*FMCRMYSNGVV Trigger: TACTACTCCATTACTGTACATTCTACACATGAACAATCTCCAAGAGGGCAGAACTAAAGGTCCTCTGGCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGTTACTGTGACACAGACCATGAACCTTTTATTCCAAACCTGTTAGGGGACGTTCCACTTTATAGGTaGACGACAGCAAGTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: FCYCDTDHEPFIPNLLGDVPLYR*TTASCT Trigger: TGTGCAACTTGCTGTCGTTCACCTATAAAGTGGAAC...GTCCCCTAACAGGTTTGGAATAAAAGGTTCATGGTCTGTGTCACAGTAACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| CDS-3UTR GCA 90 bp | ACCTTTTATTCCAAACCTGTTAGGGGACCCATGGCTTACGTTCCATGCATTCTTGAGACCAGGTTCAAATaGAGCTTTTCGGTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TFYSKPVRGPMAYVPCILETRFK*SFSVSL Trigger: CAAAGAAACCGAAAAGCTGCATTTGAACCTGGTCTC...AAGAATGCATGGAACGTAAGCCATGGGTCCCCTAACAGGTTTGGAATAAAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| CDS-3UTR CCA 90 bp | CCCTATCATGGATTTATAGCTTCCAGGAAAGCTAGAGATGCTTACAAAAGGTCTAAGTCACTCTCAAGTTaGTCTGCCTGGTACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PYHGFIASRKARDAYKRSKSLSS*SAWYFL Trigger: GAGGAAGTACCAGGCAGACCAACTTGAGAGTGACTT...AGACCTTTTGTAAGCATCTCTAGCTTTCCTGGAAGCTATAAATCCATGATAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| 3UTR CAA 72 bp | CCCCCAGGAGCAGTATTCCTACTTTCTGTTCCTGTGTaGCAGCTTTATTCTTCGTCCTATATTCAAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPGAVFLLSVPV*QLYSSSYIQNS Trigger: AGAGTTTTGAATATAGGACGAAGAATAAAGCTGCAACACAGGAACAGAAAGTAGGAATACTGCTCCTGGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| CDS-3UTR GCA 90 bp | CACAAGCCCTATCATGGATTTATAGCTTCCAGGAAAGCTAGAGATGCTTACAAACTCCTTTGCACTTCCTaGCTGGACACAAAGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: HKPYHGFIASRKARDAYKLLCTS*LDTKYL Trigger: CAAATACTTTGTGTCCAGGCAGGAAGTGCAAAGGAG...TTTGTAAGCATCTCTAGCTTTCCTGGAAGCTATAAATCCATGATAGGGCTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| CDS-3UTR CCA 90 bp | ATACAACCAAGTCAGCACTGGTGCTTACAGGAGGAAGAGATATTCTGGAGCACTGCTTTTCGGTTTCTTTaGAAAATGAAGCAAACACCT | + |
|
Preference number: 4 (lower is better) Translates to: IQPSQHWCLQEEEIFWSTAFRFL*KMKQTP Trigger: AGGTGTTTGCTTCATTTTCCAAAGAAACCGAAAAGC...AGTGCTCCAGAATATCTCTTCCTCCTGTAAGCACCAGTGCTGACTTGGTTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGCTAGAGATGCTTACAAAAGGTCTTCAGTTACCCCCATTCTAGCTGATTTTGCACTTCCTGCCTaGACACAAAGTATTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKARDAYKRSSVTPILADFALPA*TQSICR Trigger: TCTGCAAATACTTTGTGTCCAGGCAGGAAGTGCAAA...ATCAGCTAGAATGGGGGTAACTGAAGACCTTTTGTAAGCATCTCTAGCTTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTGCCCTCTTGGAGATTGTTCATGTGTAGAATGTACAGTAATGGAGTAGTAGGTTTCTTTGGAAAATaGAGCAAACACCTTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLPSWRLFMCRMYSNGVVGFFGK*SKHLVQ Trigger: CTGCACAAGGTGTTTGCTTCATTTTCCAAAGAAACC...TACTACTCCATTACTGTACATTCTACACATGAACAATCTCCAAGAGGGCAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| CDS-3UTR TCA 90 bp | AAGGACTTTACGCATGCTGTTCTCTGCCCAACTGTTTTAGGAAACATTAAATACTCTAGTCTTTCCAGGTaGGCTAAAACACCTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KDFTHAVLCPTVLGNIKYSSLSR*AKTPPL Trigger: CAAAGGAGGTGTTTTAGCTCACCTGGAAAGACTAGA...GTATTTAATGTTTCCTAAAACAGTTGGGCAGAGAACAGCATGCGTAAAGTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| 3UTR CAA 72 bp | GTTTTATTAAAAGCTTTACTCAACTTGATGAGACTGTaGTGGCAATTCTGTTACTGTGACACAGACCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLLKALLNLMRL*WQFCYCDTDHE Trigger: TTCATGGTCTGTGTCACAGTAACAGAATTGCCACAACAGTCTCATCAAGTTGAGTAAAGCTTTTAATAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| CDS GCA 90 bp | TGCCTCCACACCTGGCCTTGTCACAGTGACATTCGTGGGAAGAGCTaGTGTGGGGTCCTCATACAGCAACCTGGCACTGAAGGAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CLHTWPCHSDIRGKS*CGVLIQQPGTEGEG Trigger: ACCTTCTCCTTCAGTGCCAGGTTGCTGTATGAGGACCCCACAGCAGCTCTTCCCACGAATGTCACTGTGACAAGGCCAGGTGTGGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| CDS TCA 90 bp | GAAGAGCATCTGATGGGATGCTCTGTGCTCTTCCCAAGGAGGGGATaGTGCCTCCACACCTGGCCTTGTCACAGTGACATTCGTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EEHLMGCSVLFPRRG*CLHTWPCHSDIRGK Trigger: CTTCCCACGAATGTCACTGTGACAAGGCCAGGTGTGGAGGCATCATCCCCTCCTTGGGAAGAGCACAGAGCATCCCATCAGATGCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| CDS-3UTR CAA 90 bp | GGGACCAAAGCTCAGAGCACTGGGCTCTGTGCTGCCCATACAGTTAGCCAACAGGCTAAAACACCTCCTTaGCACTTCCTGCCTGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: GTKAQSTGLCAAHTVSQQAKTPP*HFLPGH Trigger: GTGTCCAGGCAGGAAGTGCAAAGGAGGTGTTTTAGC...CTGTTGGCTAACTGTATGGGCAGCACAGAGCCCAGTGCTCTGAGCTTTGGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| CDS-3UTR CAA 90 bp | TCACTCGCCCCAGTACCAGTCAGTGCTATGTGGTCTGCTGTCTGTCTCTGGGGCTGTCCAATTCTCAAGTaGGTCTGCCTGGTACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLAPVPVSAMWSAVCLWGCPILK*VCLVLP Trigger: AGGAAGTACCAGGCAGACCAACTTGAGAATTGGACA...GCCCCAGAGACAGACAGCAGACCACATAGCACTGACTGGTACTGGGGCGAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111169.10 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGAAAGCAGTGGACAGTACATGGCCATCAGACTGCAGTTAGCCATGGGGTGTCCAATTCTCAAGTaGGTCTGCCTGGTACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GRESSGQYMAIRLQLAMGCPILK*VCLVLP Trigger: AGGAAGTACCAGGCAGACCAACTTGAGAATTGGACA...CCCCATGGCTAACTGCAGTCTGATGGCCATGTACTGTCCACTGCTTTCCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146261.2 |
||
| CDS CCA 90 bp | CCACTCCCTTTCCAGAACTTCCTGTTCACTGATCACGGTTCTGCTTaGGTCTTCTTTGGCAGGAGGTTCTTTAACTCTGGCTCCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PLPFQNFLFTDHGSA*VFFGRRFFNSGSPL Trigger: CAGTGGGGAGCCAGAGTTAAAGAACCTCCTGCCAAAGAAGACCCAAGCAGAACCGTGATCAGTGAACAGGAAGTTCTGGAAAGGGAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
||
| CDS GCA 90 bp | CTGGCTCCCCACTGCTTCACTTCTGCCCTCAGCTTATCTCGTTGTTaGCGCAGTTCTCGAATCTTGGTTCTAAGAGAACTTTCCTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LAPHCFTSALSLSRC*RSSRILVLRELSFL Trigger: TAAAAAGGAAAGTTCTCTTAGAACCAAGATTCGAGAACTGCGGCAACAACGAGATAAGCTGAGGGCAGAAGTGAAGCAGTGGGGAGCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
||
| CDS-3UTR CAA 90 bp | TACTCATATGAGGAGTGGCCTCACTACTGGGCAAATTTACAGGAGTTTGAAGTAGAAGTCACTCTCAAGTaGGTCTGCCTGGTACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YSYEEWPHYWANLQEFEVEVTLK*VCLVLP Trigger: AGGAAGTACCAGGCAGACCAACTTGAGAGTGACTTC...TACTTCAAACTCCTGTAAATTTGCCCAGTAGTGAGGCCACTCCTCATATGAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACTTTACGCATGCTGTTCTCTGCCCAACTGTTTTAGGAAACATTAAATACGAAGTCACTCTCAAGTaGGTCTGCCTGGTACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KDFTHAVLCPTVLGNIKYEVTLK*VCLVLP Trigger: AGGAAGTACCAGGCAGACCAACTTGAGAGTGACTTC...GTATTTAATGTTTCCTAAAACAGTTGGGCAGAGAACAGCATGCGTAAAGTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
||
| CDS-3UTR CAA 90 bp | ATACAACCAAGTCAGCACTGGTGCTTACAGGAGGAAGAGATATTCTGGAGCACTAGCTTTTCGGTTTCTTaGGAAAATGAAGCAAACACC | + |
|
Preference number: 5 (lower is better) Translates to: IQPSQHWCLQEEEIFWSTSFSVS*ENEANT Trigger: GGTGTTTGCTTCATTTTCCAAAGAAACCGAAAAGCT...AGTGCTCCAGAATATCTCTTCCTCCTGTAAGCACCAGTGCTGACTTGGTTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
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| CDS-3UTR CAA 90 bp | ATTCACTCAAAACATTTAAGATTCAGGTTTGGGTGGAAACGGCCTCCGTTCGGTAGCTTTTCGGTTTCTTaGGAAAATGAAGCAAACACC | + |
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Preference number: 5 (lower is better) Translates to: IHSKHLRFRFGWKRPPFGSFSVS*ENEANT Trigger: GGTGTTTGCTTCATTTTCCAAAGAAACCGAAAAGCT...ACCGAACGGAGGCCGTTTCCACCCAAACCTGAATCTTAAATGTTTTGAGTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140975.8 |
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| CDS GCA 90 bp | CAGTTCTCGAATCTTGGTTCTAAGAGAACTTTCCTTTTTACGAACTaGTGGTTCTTCAGACTTTCTATTCGATATGTTCGTTTGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: QFSNLGSKRTFLFTN*WFFRLSIRYVRLSL Trigger: GAGGCTCAAACGAACATATCGAATAGAAAGTCTGAAGAACCAGCAGTTCGTAAAAAGGAAAGTTCTCTTAGAACCAAGATTCGAGAACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS CAA 72 bp | AGGTCCCGTGAGGACATCGCAGAAGTCACTCTCAAGTaGGTCTGCCTGGTACTTCCTCCCCGCGTAGGCATT | + |
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Preference number: 6 (lower is better) Translates to: RSREDIAEVTLK*VCLVLPPRVGI Trigger: AATGCCTACGCGGGGAGGAAGTACCAGGCAGACCAACTTGAGAGTGACTTCTGCGATGTCCTCACGGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020981.12 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS TCA 72 bp | CTGATGGGATGCTCTGTGCTCTTCCCAAGGAGGGGATaGTGCCTCCACACCTGGCCTTGTCACAGTGACATT | + |
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Preference number: 6 (lower is better) Translates to: LMGCSVLFPRRG*CLHTWPCHSDI Trigger: AATGTCACTGTGACAAGGCCAGGTGTGGAGGCATCATCCCCTCCTTGGGAAGAGCACAGAGCATCCCATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
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| CDS TCA 72 bp | AACACCTTGTGCAGGGGCTTGGTACGGAAGAGCATCTaGTGGGATGCTCTGTGCTCTTCCCAAGGAGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: NTLCRGLVRKSI*WDALCSSQGGD Trigger: ATCCCCTCCTTGGGAAGAGCACAGAGCATCCCATCAGATGCTCTTCCGTACCAAGCCCCTGCACAAGGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020981.12 ENSMUST00000140975.8 |
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| CDS TCA 72 bp | GCAAGTTGCACAGGGCGTTTCTCTGCAAAGGTCCCGTaGGGACATCGCAGAAGTCACTCTCAAGTTGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: ASCTGRFSAKVP*GHRRSHSQVGL Trigger: CAGACCAACTTGAGAGTGACTTCTGCGATGTCCTCACGGGACCTTTGCAGAGAAACGCCCTGTGCAACTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020981.12 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS TCA 72 bp | TCTGTAGGTGTGCTGCGGCTATCTTTTCCAGAGGGATaGAGACTGGGACGGAATGGTGATGAATCCGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: SVGVLRLSFPEG*RLGRNGDESGV Trigger: CACTCCGGATTCATCACCATTCCGTCCCAGTCTTCATCCCTCTGGAAAAGATAGCCGCAGCACACCTACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020981.12 ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS TCA 72 bp | AGTAGGAATCTAGTAGGTTCCCCTCAAAGGCTGTGCTaGTGCACATGCAGACGCCACGACTGGTCAACTTCC | + |
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Preference number: 6 (lower is better) Translates to: SRNLVGSPQRLC*CTCRRHDWSTS Trigger: GGAAGTTGACCAGTCGTGGCGTCTGCATGTGCATCAGCACAGCCTTTGAGGGGAACCTACTAGATTCCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS GCA 72 bp | AGGTTCTTTAACTCTGGCTCCCCACTGCTTCACTTCTaGCCTCAGCTTATCTCGTTGTTGCCGCAGTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: RFFNSGSPLLHF*PQLISLLPQFS Trigger: CGAGAACTGCGGCAACAACGAGATAAGCTGAGGGCAGAAGTGAAGCAGTGGGGAGCCAGAGTTAAAGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS CAA 72 bp | TCCTGTTCACTGATCACGGTTCTGCTTGGGTCTTCTTaGGCAGGAGGTTCTTTAACTCTGGCTCCCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: SCSLITVLLGSS*AGGSLTLAPHC Trigger: GCAGTGGGGAGCCAGAGTTAAAGAACCTCCTGCCAAAGAAGACCCAAGCAGAACCGTGATCAGTGAACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS GCA 72 bp | TCTTTGGCAGGAGGTTCTTTAACTCTGGCTCCCCACTaGTTCACTTCTGCCCTCAGCTTATCTCGTTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: SLAGGSLTLAPH*FTSALSLSRCC Trigger: GCAACAACGAGATAAGCTGAGGGCAGAAGTGAAGCAGTGGGGAGCCAGAGTTAAAGAACCTCCTGCCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS TCA 72 bp | CATTTCTCCACTCCCTTTCCAGAACTTCCTGTTCACTaGTCACGGTTCTGCTTGGGTCTTCTTTGGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: HFSTPFPELPVH*SRFCLGLLWQE Trigger: CTCCTGCCAAAGAAGACCCAAGCAGAACCGTGATCAGTGAACAGGAAGTTCTGGAAAGGGAGTGGAGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS CAA 72 bp | TCCCCACTGCTTCACTTCTGCCCTCAGCTTATCTCGTaGTTGCCGCAGTTCTCGAATCTTGGTTCTAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: SPLLHFCPQLIS*LPQFSNLGSKR Trigger: TCTCTTAGAACCAAGATTCGAGAACTGCGGCAACAACGAGATAAGCTGAGGGCAGAAGTGAAGCAGTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS TCA 72 bp | GGACGGAATGGTGATGAATCCGGAGTGGTTTCTCTATaGCGAGGTCCACAAAGTAGGAATCTAGTAGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GRNGDESGVVSL*RGPQSRNLVGS Trigger: GGAACCTACTAGATTCCTACTTTGTGGACCTCGTCATAGAGAAACCACTCCGGATTCATCACCATTCCGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020981.12 ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS CCA 72 bp | GATGAAGACTGGGACGGAATGGTGATGAATCCGGAGTaGTTTCTCTATGACGAGGTCCACAAAGTAGGAATC | + |
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Preference number: 6 (lower is better) Translates to: DEDWDGMVMNPE*FLYDEVHKVGI Trigger: GATTCCTACTTTGTGGACCTCGTCATAGAGAAACCACTCCGGATTCATCACCATTCCGTCCCAGTCTTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020981.12 ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS CCA 72 bp | TTCCAGAACTTCCTGTTCACTGATCACGGTTCTGCTTaGGTCTTCTTTGGCAGGAGGTTCTTTAACTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: FQNFLFTDHGSA*VFFGRRFFNSG Trigger: GCCAGAGTTAAAGAACCTCCTGCCAAAGAAGACCCAAGCAGAACCGTGATCAGTGAACAGGAAGTTCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS CAA 72 bp | CCACTGCTTCACTTCTGCCCTCAGCTTATCTCGTTGTaGCCGCAGTTCTCGAATCTTGGTTCTAAGAGAACT | + |
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Preference number: 6 (lower is better) Translates to: PLLHFCPQLISL*PQFSNLGSKRT Trigger: AGTTCTCTTAGAACCAAGATTCGAGAACTGCGGCAACAACGAGATAAGCTGAGGGCAGAAGTGAAGCAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS TCA 72 bp | GCATTTAGGTATTCCCAGAGTCTAAACAGGAAGCGCTaGACATCAGTCTGTAGGTGTGCTGCGGCTATCTTT | + |
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Preference number: 6 (lower is better) Translates to: AFRYSQSLNRKR*TSVCRCAAAIF Trigger: AAAGATAGCCGCAGCACACCTACAGACTGATGTTCAGCGCTTCCTGTTTAGACTCTGGGAATACCTAAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020981.12 ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS GCA 72 bp | CCTCTAGTCTTTCCAGGTGAGCTAAAACACCTCCTTTaGACTTCCTGCCTGGACACAAAGTATTTGCAGACT | + |
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Preference number: 6 (lower is better) Translates to: PLVFPGELKHLL*TSCLDTKYLQT Trigger: AGTCTGCAAATACTTTGTGTCCAGGCAGGAAGTGCAAAGGAGGTGTTTTAGCTCACCTGGAAAGACTAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111169.10 ENSMUST00000140975.8 |
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| CDS GCA 72 bp | CACTGCTTCACTTCTGCCCTCAGCTTATCTCGTTGTTaGCGCAGTTCTCGAATCTTGGTTCTAAGAGAACTT | + |
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Preference number: 6 (lower is better) Translates to: HCFTSALSLSRC*RSSRILVLREL Trigger: AAGTTCTCTTAGAACCAAGATTCGAGAACTGCGGCAACAACGAGATAAGCTGAGGGCAGAAGTGAAGCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS CAA 90 bp | ACTTCTGCCCTCAGCTTATCTCGTTGTTGCCGCAGTTCTCGAATCTaGGTTCTAAGAGAACTTTCCTTTTTACGAACTGCTGGTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: TSALSLSRCCRSSRI*VLRELSFLRTAGSS Trigger: TGAAGAACCAGCAGTTCGTAAAAAGGAAAGTTCTCTTAGAACCAAGATTCGAGAACTGCGGCAACAACGAGATAAGCTGAGGGCAGAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS CAA 72 bp | CTCAGCTTATCTCGTTGTTGCCGCAGTTCTCGAATCTaGGTTCTAAGAGAACTTTCCTTTTTACGAACTGCT | + |
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Preference number: 6 (lower is better) Translates to: LSLSRCCRSSRI*VLRELSFLRTA Trigger: AGCAGTTCGTAAAAAGGAAAGTTCTCTTAGAACCAAGATTCGAGAACTGCGGCAACAACGAGATAAGCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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| CDS GCA 72 bp | AATCTTGGTTCTAAGAGAACTTTCCTTTTTACGAACTaGTGGTTCTTCAGACTTTCTATTCGATATGTTCGT | + |
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Preference number: 6 (lower is better) Translates to: NLGSKRTFLFTN*WFFRLSIRYVR Trigger: ACGAACATATCGAATAGAAAGTCTGAAGAACCAGCAGTTCGTAAAAAGGAAAGTTCTCTTAGAACCAAGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111169.10 ENSMUST00000128466.2 ENSMUST00000140975.8 |
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