Pregenerated sensors for CENPM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068101Ensembl transcript IDs: ENSMUST00000089155.6, ENSMUST00000089157.11, ENSMUST00000229747.2, ENSMUST00000230408.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTGCCTCTGGGCCTGTCAGGCCCTGACTGGTCTTCACCAACAGTaGCTGCTTTTGGAACTGGCAGCAAACGTGTGGAGGGCAGTAATG | + |
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Preference number: 1 (lower is better) Translates to: GCLWACQALTGLHQQ*LLLELAANVWRAVM Trigger: CATTACTGCCCTCCACACGTTTGCTGCCAGTTCCAAAAGCAGCCACTGTTGGTGAAGACCAGTCAGGGCCTGACAGGCCCAGAGGCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR CCA 90 bp | AGTCCTGCAGTGAGCAGGCTGCCTCTGGGCCTGTCAGGCCCTGACTaGTCTTCACCAACAGTGGCTGCTTTTGGAACTGGCAGCAAACGT | + |
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Preference number: 1 (lower is better) Translates to: SPAVSRLPLGLSGPD*SSPTVAAFGTGSKR Trigger: ACGTTTGCTGCCAGTTCCAAAAGCAGCCACTGTTGGTGAAGACCAGTCAGGGCCTGACAGGCCCAGAGGCAGCCTGCTCACTGCAGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR TCA 90 bp | ACCAGAATACAACAGCCGGGCTGTAAGAAACGCAGGGCCTGGACCTaGCATTTTCCCTGGGCTCCTGGAAGCCACACTTTGCCCCCGCAA | + |
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Preference number: 1 (lower is better) Translates to: TRIQQPGCKKRRAWT*HFPWAPGSHTLPPQ Trigger: TTGCGGGGGCAAAGTGTGGCTTCCAGGAGCCCAGGGAAAATGTCAGGTCCAGGCCCTGCGTTTCTTACAGCCCGGCTGTTGTATTCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR GCA 90 bp | GGGCCTGGACCTGACATTTTCCCTGGGCTCCTGGAAGCCACACTTTaGCCCCGCAATTGTACTGAGTCAGTTTCTGCATCTACAACACAT | + |
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Preference number: 1 (lower is better) Translates to: GPGPDIFPGLLEATL*PRNCTESVSASTTH Trigger: ATGTGTTGTAGATGCAGAAACTGACTCAGTACAATTGCGGGGGCAAAGTGTGGCTTCCAGGAGCCCAGGGAAAATGTCAGGTCCAGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR TCA 90 bp | TCTTGGGCAGCAAGCCACCTGCCATTTCCTTCAGCCCTCTCAATGTaGGTAGAACCAGCTCCACTTACACGAGGAAAAACAGGCACCAGA | + |
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Preference number: 1 (lower is better) Translates to: SWAASHLPFPSALSM*VEPAPLTRGKTGTR Trigger: TCTGGTGCCTGTTTTTCCTCGTGTAAGTGGAGCTGGTTCTACTCACATTGAGAGGGCTGAAGGAAATGGCAGGTGGCTTGCTGCCCAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGCTGCTGGGGTCTCGCTGGGCTCTCTCCCGACTCCTGCCCAGCAGACCTCCCAGCAGACCTCCCTaGTGGAGCTCAGTCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GRLLGSRWALSRLLPSRPPSRPP*WSSVLQ Trigger: CTGCAGGACTGAGCTCCACCAGGGAGGTCTGCTGGG...AGGTCTGCTGGGCAGGAGTCGGGAGAGAGCCCAGCGAGACCCCAGCAGCCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| 3UTR-3UTR CCA 90 bp | TCTCGCTGGGCTCTCTCCCGACTCCTGCCCAGCAGACCTCCCTGGTGGAGCTCAGGCTGCTTTTGGAACTaGCAGCAAACGTGTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: SRWALSRLLPSRPPWWSSGCFWN*QQTCGG Trigger: CCCTCCACACGTTTGCTGCCAGTTCCAAAAGCAGCC...TGAGCTCCACCAGGGAGGTCTGCTGGGCAGGAGTCGGGAGAGAGCCCAGCGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGCTGCTGGGGTCTCGCTGGGCTCTCTCCCGACTCCTGCCCAGCAGACCTTTCACCAACAGTGGCTaGTTTTGGAACTGGCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GRLLGSRWALSRLLPSRPFTNSG*FWNWQQ Trigger: TTGCTGCCAGTTCCAAAAGCAGCCACTGTTGGTGAA...AGGTCTGCTGGGCAGGAGTCGGGAGAGAGCCCAGCGAGACCCCAGCAGCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR-3UTR CCA 90 bp | GCAATGTGGTCTTGGGCAGCAAGCCACCTGCCATTTCCTTCAGCCCTCTCAATGCCCAGCAGACCTCCCTaGTGGAGCTCAGTCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: AMWSWAASHLPFPSALSMPSRPP*WSSVLQ Trigger: CTGCAGGACTGAGCTCCACCAGGGAGGTCTGCTGGG...CATTGAGAGGGCTGAAGGAAATGGCAGGTGGCTTGCTGCCCAAGACCACATTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR-3UTR TCA 90 bp | CAATGTGGTCTTGGGCAGCAAGCCACCTGCCATTTCCTTCAGCCCTCTCAATGTCGCAGGGCCTGGACCTaGCATTTTCCCTGGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: QCGLGQQATCHFLQPSQCRRAWT*HFPWAP Trigger: AGGAGCCCAGGGAAAATGTCAGGTCCAGGCCCTGCG...ACATTGAGAGGGCTGAAGGAAATGGCAGGTGGCTTGCTGCCCAAGACCACATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR-3UTR TCA 90 bp | ATTTTCCCTGGGCTCCTGGAAGCCACACTTTGCCCCCGCAATTGTACTGAGTCAGGGCCTGTCAGGCCCTaGCTGGTCTTCACCAACAGT | + |
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Preference number: 2 (lower is better) Translates to: IFPGLLEATLCPRNCTESGPVRP*LVFTNS Trigger: ACTGTTGGTGAAGACCAGTCAGGGCCTGACAGGCCC...TGACTCAGTACAATTGCGGGGGCAAAGTGTGGCTTCCAGGAGCCCAGGGAAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR-3UTR TCA 90 bp | AGAAACGCAGGGCCTGGACCTGACATTTTCCCTGGGCTCCTGGAAGCCACACTTCCCCCGCAATTGTACTaGGTCAGTTTCTGCATCTAC | + |
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Preference number: 2 (lower is better) Translates to: RNAGPGPDIFPGLLEATLPPQLY*VSFCIY Trigger: GTAGATGCAGAAACTGACTCAGTACAATTGCGGGGG...AAGTGTGGCTTCCAGGAGCCCAGGGAAAATGTCAGGTCCAGGCCCTGCGTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAATGTGGTCTTGGGCAGCAAGCCACCTGCCATTTCCTTCAGCCCTCTCAGGTCTTCACCAACAGTaGCTGCTTTTGGAACTGGCA | + |
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Preference number: 2 (lower is better) Translates to: GAMWSWAASHLPFPSALSGLHQQ*LLLELA Trigger: TGCCAGTTCCAAAAGCAGCCACTGTTGGTGAAGACC...TGAGAGGGCTGAAGGAAATGGCAGGTGGCTTGCTGCCCAAGACCACATTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR CAA 90 bp | GTGATCTACAAGAGAGACCAACAAGTTGTAGGGAGCAATGTGGTCTaGGGCAGCAAGCCACCTGCCATTTCCTTCAGCCCTCTCAATGTG | + |
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Preference number: 2 (lower is better) Translates to: VIYKRDQQVVGSNVV*GSKPPAISFSPLNV Trigger: CACATTGAGAGGGCTGAAGGAAATGGCAGGTGGCTTGCTGCCCAAGACCACATTGCTCCCTACAACTTGTTGGTCTCTCTTGTAGATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR-3UTR CCA 90 bp | AGAAACGCAGGGCCTGGACCTGACATTTTCCCTGGGCTCCTGGAAGCCACACTTTTCCAAAATCTTAGGTaGATTATGATGTTAGACAGG | + |
|
Preference number: 2 (lower is better) Translates to: RNAGPGPDIFPGLLEATLFQNLR*IMMLDR Trigger: CCTGTCTAACATCATAATCCACCTAAGATTTTGGAA...AAGTGTGGCTTCCAGGAGCCCAGGGAAAATGTCAGGTCCAGGCCCTGCGTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR GCA 72 bp | GGCTGCTGGGGTCTCGCTGGGCTCTCTCCCGACTCCTaGCCAGCAGACCTCCCTGGTGGAGCTCAGTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: GCWGLAGLSPDS*PADLPGGAQSC Trigger: GCAGGACTGAGCTCCACCAGGGAGGTCTGCTGGGCAGGAGTCGGGAGAGAGCCCAGCGAGACCCCAGCAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| 3UTR GCA 72 bp | TCCTGCCCAGCAGACCTCCCTGGTGGAGCTCAGTCCTaGAGTGAGCAGGCTGCCTCTGGGCCTGTCAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: SCPADLPGGAQS*SEQAASGPVRP Trigger: GGGCCTGACAGGCCCAGAGGCAGCCTGCTCACTGCAGGACTGAGCTCCACCAGGGAGGTCTGCTGGGCAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| 3UTR CCA 72 bp | GGTGAGACGAGAAACGGGAGGCTGCTGGGGTCTCGCTaGGCTCTCTCCCGACTCCTGCCCAGCAGACCTCCC | + |
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Preference number: 3 (lower is better) Translates to: GETRNGRLLGSR*ALSRLLPSRPP Trigger: GGGAGGTCTGCTGGGCAGGAGTCGGGAGAGAGCCCAGCGAGACCCCAGCAGCCTCCCGTTTCTCGTCTCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| 3UTR CCA 72 bp | GACCTCTGTGGGGTGAGACGAGAAACGGGAGGCTGCTaGGGTCTCGCTGGGCTCTCTCCCGACTCCTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: DLCGVRRETGGC*GLAGLSPDSCP Trigger: TGGGCAGGAGTCGGGAGAGAGCCCAGCGAGACCCCAGCAGCCTCCCGTTTCTCGTCTCACCCCACAGAGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| 3UTR TCA 72 bp | CAACAGCCGGGCTGTAAGAAACGCAGGGCCTGGACCTaGCATTTTCCCTGGGCTCCTGGAAGCCACACTTTG | + |
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Preference number: 3 (lower is better) Translates to: QQPGCKKRRAWT*HFPWAPGSHTL Trigger: CAAAGTGTGGCTTCCAGGAGCCCAGGGAAAATGTCAGGTCCAGGCCCTGCGTTTCTTACAGCCCGGCTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR CCA 72 bp | TGGGCCTGTCAGGCCCTGACTGGTCTTCACCAACAGTaGCTGCTTTTGGAACTGGCAGCAAACGTGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: WACQALTGLHQQ*LLLELAANVWR Trigger: CCTCCACACGTTTGCTGCCAGTTCCAAAAGCAGCCACTGTTGGTGAAGACCAGTCAGGGCCTGACAGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR CCA 72 bp | ACGCAGGGCCTGGACCTGACATTTTCCCTGGGCTCCTaGAAGCCACACTTTGCCCCCGCAATTGTACTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: TQGLDLTFSLGS*KPHFAPAIVLS Trigger: ACTCAGTACAATTGCGGGGGCAAAGTGTGGCTTCCAGGAGCCCAGGGAAAATGTCAGGTCCAGGCCCTGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR CCA 72 bp | GATTATGATGTTAGACAGGTGCAGATGGGACCTCTGTaGGGTGAGACGAGAAACGGGAGGCTGCTGGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: DYDVRQVQMGPL*GETRNGRLLGS Trigger: AGACCCCAGCAGCCTCCCGTTTCTCGTCTCACCCCACAGAGGTCCCATCTGCACCTGTCTAACATCATAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| 3UTR GCA 72 bp | CCTGACATTTTCCCTGGGCTCCTGGAAGCCACACTTTaGCCCCGCAATTGTACTGAGTCAGTTTCTGCATCT | + |
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Preference number: 3 (lower is better) Translates to: PDIFPGLLEATL*PRNCTESVSAS Trigger: AGATGCAGAAACTGACTCAGTACAATTGCGGGGGCAAAGTGTGGCTTCCAGGAGCCCAGGGAAAATGTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR CCA 72 bp | AATCTTAGGTGGATTATGATGTTAGACAGGTGCAGATaGGACCTCTGTGGGGTGAGACGAGAAACGGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: NLRWIMMLDRCR*DLCGVRRETGG Trigger: GCCTCCCGTTTCTCGTCTCACCCCACAGAGGTCCCATCTGCACCTGTCTAACATCATAATCCACCTAAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| 3UTR TCA 72 bp | GCTCCTGGAAGCCACACTTTGCCCCCGCAATTGTACTaGGTCAGTTTCTGCATCTACAACACATTTCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: APGSHTLPPQLY*VSFCIYNTFPS Trigger: GGAAGGAAATGTGTTGTAGATGCAGAAACTGACTCAGTACAATTGCGGGGGCAAAGTGTGGCTTCCAGGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| 3UTR TCA 72 bp | GCAAGCCACCTGCCATTTCCTTCAGCCCTCTCAATGTaGGTAGAACCAGCTCCACTTACACGAGGAAAAACA | + |
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Preference number: 3 (lower is better) Translates to: ASHLPFPSALSM*VEPAPLTRGKT Trigger: TGTTTTTCCTCGTGTAAGTGGAGCTGGTTCTACTCACATTGAGAGGGCTGAAGGAAATGGCAGGTGGCTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| CDS-3UTR GCA 90 bp | GGGTCTCGCTGGGCTCTCTCCCGACTCCTGCCCAGCAGACCTCCCTGGTGGAGCGACTCCGCCAGCTGCTaGAGAAGCGCATCCTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: GSRWALSRLLPSRPPWWSDSASC*RSASSV Trigger: CACCGAGGATGCGCTTCTGCAGCAGCTGGCGGAGTC...GCTCCACCAGGGAGGTCTGCTGGGCAGGAGTCGGGAGAGAGCCCAGCGAGACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR GCA 90 bp | GGGCTCTCTCCCGACTCCTGCCCAGCAGACCTCCCTGGTGGAGCTCAGTCCTGCCGCAGATCTGCAGAATaGGCACCAGACGCCGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: GLSPDSCPADLPGGAQSCRRSAE*APDAAP Trigger: TGGCGCGGCGTCTGGTGCGCATTCTGCAGATCTGCG...GCAGGACTGAGCTCCACCAGGGAGGTCTGCTGGGCAGGAGTCGGGAGAGAGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR GCA 90 bp | AGAAACGGGAGGCTGCTGGGGTCTCGCTGGGCTCTCTCCCGACTCCTGCCCAGCCGCAGATCTGCAGAATaGGCACCAGACGCCGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: RNGRLLGSRWALSRLLPSRRSAE*APDAAP Trigger: TGGCGCGGCGTCTGGTGCGCATTCTGCAGATCTGCG...GCTGGGCAGGAGTCGGGAGAGAGCCCAGCGAGACCCCAGCAGCCTCCCGTTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR CCA 90 bp | GGTCTCGCTGGGCTCTCTCCCGACTCCTGCCCAGCAGACCTCCCTGGTGGAGCTGGGGCCGGTTCACATTaGAGGGCAGAGGGAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: GLAGLSPDSCPADLPGGAGAGSH*RAEGGS Trigger: ACTCCCTCCCTCTGCCCTCCAATGTGAACCGGCCCC...AGCTCCACCAGGGAGGTCTGCTGGGCAGGAGTCGGGAGAGAGCCCAGCGAGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR CCA 90 bp | AGAAACGGGAGGCTGCTGGGGTCTCGCTGGGCTCTCTCCCGACTCCTGCCCAGCGAGACGCCTGGCACATaGCCAGCGCAGATCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RNGRLLGSRWALSRLLPSETPGT*PAQICR Trigger: TCTGCAGATCTGCGCTGGCCATGTGCCAGGCGTCTC...GCTGGGCAGGAGTCGGGAGAGAGCCCAGCGAGACCCCAGCAGCCTCCCGTTTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR CCA 90 bp | TGGGGTGAGACGAGAAACGGGAGGCTGCTGGGGTCTCGCTGGGCTCTCTCCCGAGCAGAGGGAGGGAGTTaGCCAAGTGGACCCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: WGETRNGRLLGSRWALSRAEGGS*PSGPSA Trigger: AGCTGAGGGTCCACTTGGCCAACTCCCTCCCTCTGC...TCGGGAGAGAGCCCAGCGAGACCCCAGCAGCCTCCCGTTTCTCGTCTCACCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR CCA 90 bp | TCTCCCGACTCCTGCCCAGCAGACCTCCCTGGTGGAGCTCAGTCCTGCAGTGAGGGGGCCGGTTCACATTaGAGGGCAGAGGGAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SPDSCPADLPGGAQSCSEGAGSH*RAEGGS Trigger: ACTCCCTCCCTCTGCCCTCCAATGTGAACCGGCCCC...CTCACTGCAGGACTGAGCTCCACCAGGGAGGTCTGCTGGGCAGGAGTCGGGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR CCA 90 bp | GCCCAGCAGACCTCCCTGGTGGAGCTCAGTCCTGCAGTGAGCAGGCTGCCTCTGGAGACGCCTGGCACATaGCCAGCGCAGATCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: AQQTSLVELSPAVSRLPLETPGT*PAQICR Trigger: TCTGCAGATCTGCGCTGGCCATGTGCCAGGCGTCTC...CAGAGGCAGCCTGCTCACTGCAGGACTGAGCTCCACCAGGGAGGTCTGCTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR TCA 90 bp | GCTGGGCTCTCTCCCGACTCCTGCCCAGCAGACCTCCCTGGTGGAGCTCAGTCCGCTTTCCACCCCCTGTaGCAAGGAAGCACACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: AGLSPDSCPADLPGGAQSAFHPL*QGSTLS Trigger: GGAAAGTGTGCTTCCTTGTCACAGGGGGTGGAAAGC...GGACTGAGCTCCACCAGGGAGGTCTGCTGGGCAGGAGTCGGGAGAGAGCCCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089155.6 |
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| CDS-3UTR GCA 90 bp | GGTCTCGCTGGGCTCTCTCCCGACTCCTGCCCAGCAGACCTCCCTGGTGGAGCTAAGCTGCTGTCCACGTaGTGCAGAAACTCCTCCACT | + |
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Preference number: 4 (lower is better) Translates to: GLAGLSPDSCPADLPGGAKLLST*CRNSST Trigger: AGTGGAGGAGTTTCTGCAGCACGTGGACAGCAGCTT...AGCTCCACCAGGGAGGTCTGCTGGGCAGGAGTCGGGAGAGAGCCCAGCGAGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR GCA 90 bp | TGGGGTGAGACGAGAAACGGGAGGCTGCTGGGGTCTCGCTGGGCTCTCTCCCGATCCCCAGGAAGAAGCTaGTGTCCACGTGCTGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: WGETRNGRLLGSRWALSRSPGRS*CPRAAE Trigger: TTCTGCAGCACGTGGACAGCAGCTTCTTCCTGGGGA...TCGGGAGAGAGCCCAGCGAGACCCCAGCAGCCTCCCGTTTCTCGTCTCACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR CCA 90 bp | GGGGTGAGACGAGAAACGGGAGGCTGCTGGGGTCTCGCTGGGCTCTCTCCCGACCTGGCAGCAAACGTGTaGAGGGCAGTAATGCTCACA | + |
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Preference number: 4 (lower is better) Translates to: GVRRETGGCWGLAGLSPDLAANV*RAVMLT Trigger: TGTGAGCATTACTGCCCTCCACACGTTTGCTGCCAG...GTCGGGAGAGAGCCCAGCGAGACCCCAGCAGCCTCCCGTTTCTCGTCTCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089155.6 |
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| CDS-3UTR CCA 90 bp | GGTGAGACGAGAAACGGGAGGCTGCTGGGGTCTCGCTGGGCTCTCTCCCGACTCGGCTGCTTTTGGAACTaGCAGCAAACGTGTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: GETRNGRLLGSRWALSRLGCFWN*QQTCGG Trigger: CCCTCCACACGTTTGCTGCCAGTTCCAAAAGCAGCC...GAGTCGGGAGAGAGCCCAGCGAGACCCCAGCAGCCTCCCGTTTCTCGTCTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089155.6 |
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| CDS-3UTR GCA 90 bp | GTTAGACAGGTGCAGATGGGACCTCTGTGGGGTGAGACGAGAAACGGGAGGCTGGACTCCGCCAGCTGCTaGAGAAGCGCATCCTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: VRQVQMGPLWGETRNGRLDSASC*RSASSV Trigger: CACCGAGGATGCGCTTCTGCAGCAGCTGGCGGAGTC...CAGCCTCCCGTTTCTCGTCTCACCCCACAGAGGTCCCATCTGCACCTGTCTAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR TCA 90 bp | GCTGTAAGAAACGCAGGGCCTGGACCTGACATTTTCCCTGGGCTCCTGGAAGCCCCTGTCCCGCCCCTGTaGCAAGGAAGCACACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: AVRNAGPGPDIFPGLLEAPVPPL*QGSTLS Trigger: GGAAAGTGTGCTTCCTTGTCACAGGGGCGGGACAGG...GGCTTCCAGGAGCCCAGGGAAAATGTCAGGTCCAGGCCCTGCGTTTCTTACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| CDS-3UTR CCA 90 bp | GGGAGGCTGCTGGGGTCTCGCTGGGCTCTCTCCCGACTCCTGCCCAGCAGACCTAACTCCTCCACTTTCTaGAGACTGTATTTGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: GRLLGSRWALSRLLPSRPNSSTF*RLYLLC Trigger: GCACAGCAAATACAGTCTCCAGAAAGTGGAGGAGTT...AGGTCTGCTGGGCAGGAGTCGGGAGAGAGCCCAGCGAGACCCCAGCAGCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR GCA 90 bp | AGACAGGTGCAGATGGGACCTCTGTGGGGTGAGACGAGAAACGGGAGGCTGCTGTCCCCAGGAAGAAGCTaGTGTCCACGTGCTGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: RQVQMGPLWGETRNGRLLSPGRS*CPRAAE Trigger: TTCTGCAGCACGTGGACAGCAGCTTCTTCCTGGGGA...CAGCAGCCTCCCGTTTCTCGTCTCACCCCACAGAGGTCCCATCTGCACCTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| 3UTR CAA 72 bp | CAGGCCCTGACTGGTCTTCACCAACAGTGGCTGCTTTaGGAACTGGCAGCAAACGTGTGGAGGGCAGTAATG | + |
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Preference number: 4 (lower is better) Translates to: QALTGLHQQWLL*ELAANVWRAVM Trigger: CATTACTGCCCTCCACACGTTTGCTGCCAGTTCCAAAAGCAGCCACTGTTGGTGAAGACCAGTCAGGGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| CDS-3UTR GCA 90 bp | TCGCTGGGCTCTCTCCCGACTCCTGCCCAGCAGACCTCCCTGGTGGAGCTCAGTAGACTGTATTTGCTGTaGAGGTTAATCACAAACACA | + |
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Preference number: 4 (lower is better) Translates to: SLGSLPTPAQQTSLVELSRLYLL*RLITNT Trigger: TGTGTTTGTGATTAACCTGCACAGCAAATACAGTCT...ACTGAGCTCCACCAGGGAGGTCTGCTGGGCAGGAGTCGGGAGAGAGCCCAGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR CCA 90 bp | AATCTTAGGTGGATTATGATGTTAGACAGGTGCAGATGGGACCTCTGTGGGGTGGCAGAGGGAGGGAGTTaGCCAAGTGGACCCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: NLRWIMMLDRCRWDLCGVAEGGS*PSGPSA Trigger: AGCTGAGGGTCCACTTGGCCAACTCCCTCCCTCTGC...CACCCCACAGAGGTCCCATCTGCACCTGTCTAACATCATAATCCACCTAAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| 3UTR CAA 72 bp | AAGAGAGACCAACAAGTTGTAGGGAGCAATGTGGTCTaGGGCAGCAAGCCACCTGCCATTTCCTTCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: KRDQQVVGSNVV*GSKPPAISFSP Trigger: AGGGCTGAAGGAAATGGCAGGTGGCTTGCTGCCCAAGACCACATTGCTCCCTACAACTTGTTGGTCTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| CDS-3UTR GCA 90 bp | AATCTTAGGTGGATTATGATGTTAGACAGGTGCAGATGGGACCTCTGTGGGGTGAGACTGTATTTGCTGTaGAGGTTAATCACAAACACA | + |
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Preference number: 4 (lower is better) Translates to: NLRWIMMLDRCRWDLCGVRLYLL*RLITNT Trigger: TGTGTTTGTGATTAACCTGCACAGCAAATACAGTCT...CACCCCACAGAGGTCCCATCTGCACCTGTCTAACATCATAATCCACCTAAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS CCA 90 bp | CTCGGGGCTCCGCAGCAAGGACATCAGGTTCAGCGCGGAGACGCCTaGCACATGGCCAGCGCAGATCTGCAGAATGCGCACCAGACGCCG | + |
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Preference number: 5 (lower is better) Translates to: LGAPQQGHQVQRGDA*HMASADLQNAHQTP Trigger: CGGCGTCTGGTGCGCATTCTGCAGATCTGCGCTGGCCATGTGCCAGGCGTCTCCGCGCTGAACCTGATGTCCTTGCTGCGGAGCCCCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS GCA 90 bp | TCAGCGCGGAGACGCCTGGCACATGGCCAGCGCAGATCTGCAGAATaGGCACCAGACGCCGCGCCATGGCTGCACGAAAGCTTTCCACCC | + |
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Preference number: 5 (lower is better) Translates to: SARRRLAHGQRRSAE*APDAAPWLHESFPP Trigger: GGGTGGAAAGCTTTCGTGCAGCCATGGCGCGGCGTCTGGTGCGCATTCTGCAGATCTGCGCTGGCCATGTGCCAGGCGTCTCCGCGCTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089155.6 |
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| CDS CCA 90 bp | CTCCGCAGCAAGGACATCAGGTTCAGCGCGGAGACGCCTGGCACATaGCCAGCGCAGATCTGCAGAATGCGCACCAGACGCCGCGCCATG | + |
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Preference number: 5 (lower is better) Translates to: LRSKDIRFSAETPGT*PAQICRMRTRRRAM Trigger: CATGGCGCGGCGTCTGGTGCGCATTCTGCAGATCTGCGCTGGCCATGTGCCAGGCGTCTCCGCGCTGAACCTGATGTCCTTGCTGCGGAG 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR CAA 90 bp | GACAGGTGCAGATGGGACCTCTGTGGGGTGAGACGAGAAACGGGAGGCTGCTGGCGGGGCCGGTTCACATaGGAGGGCAGAGGGAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: DRCRWDLCGVRRETGGCWRGRFT*EGRGRE Trigger: CTCCCTCCCTCTGCCCTCCAATGTGAACCGGCCCCG...CCAGCAGCCTCCCGTTTCTCGTCTCACCCCACAGAGGTCCCATCTGCACCTGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS GCA 90 bp | TCAGCGCGGAGACGCCTGGCACATGGCCAGCGCAGATCTGCAGAATaGGCACCAGACGCCGCGCCATGGCTGCACGAAAGCTTTCCACCT | + |
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Preference number: 5 (lower is better) Translates to: SARRRLAHGQRRSAE*APDAAPWLHESFPP Trigger: AGGTGGAAAGCTTTCGTGCAGCCATGGCGCGGCGTCTGGTGCGCATTCTGCAGATCTGCGCTGGCCATGTGCCAGGCGTCTCCGCGCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| CDS-3UTR CAA 90 bp | CAGGGCCTGGACCTGACATTTTCCCTGGGCTCCTGGAAGCCACACTTTGCCCCCGGCAGAGGGAGGGAGTaGGCCAAGTGGACCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: QGLDLTFSLGSWKPHFAPGRGRE*AKWTLS Trigger: GCTGAGGGTCCACTTGGCCAACTCCCTCCCTCTGCC...GGGGGCAAAGTGTGGCTTCCAGGAGCCCAGGGAAAATGTCAGGTCCAGGCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| CDS-3UTR CAA 90 bp | TGCCTCTGGGCCTGTCAGGCCCTGACTGGTCTTCACCAACAGTGGCTGCTTTTGCGGGGCCGGTTCACATaGGAGGGCAGAGGGAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: CLWACQALTGLHQQWLLLRGRFT*EGRGRE Trigger: CTCCCTCCCTCTGCCCTCCAATGTGAACCGGCCCCG...CAAAAGCAGCCACTGTTGGTGAAGACCAGTCAGGGCCTGACAGGCCCAGAGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| CDS TCA 90 bp | GGGAGTTGGCCAAGTGGACCCTCAGCTCGGACGCACAGTCATCTTTaGGCATCGACTCCGCCAGCTGCTGCAGAAGCGCATCCTCGGTGC | + |
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Preference number: 5 (lower is better) Translates to: GSWPSGPSARTHSHL*ASTPPAAAEAHPRC Trigger: GCACCGAGGATGCGCTTCTGCAGCAGCTGGCGGAGTCGATGCTCAAAGATGACTGTGCGTCCGAGCTGAGGGTCCACTTGGCCAACTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS CCA 90 bp | CGGGGCCGGTTCACATTGGAGGGCAGAGGGAGGGAGTTGGCCAAGTaGACCCTCAGCTCGGACGCACAGTCATCTTTGAGCATCGACTCC | + |
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Preference number: 5 (lower is better) Translates to: RGRFTLEGRGRELAK*TLSSDAQSSLSIDS Trigger: GGAGTCGATGCTCAAAGATGACTGTGCGTCCGAGCTGAGGGTCCACTTGGCCAACTCCCTCCCTCTGCCCTCCAATGTGAACCGGCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS GCA 90 bp | AGCTCGGACGCACAGTCATCTTTGAGCATCGACTCCGCCAGCTGCTaGAGAAGCGCATCCTCGGTGCTCACCAGCAAGACGGTAGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: SSDAQSSLSIDSASC*RSASSVLTSKTVAL Trigger: CAGGGCTACCGTCTTGCTGGTGAGCACCGAGGATGCGCTTCTGCAGCAGCTGGCGGAGTCGATGCTCAAAGATGACTGTGCGTCCGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS GCA 90 bp | CTCAGCTCGGACGCACAGTCATCTTTGAGCATCGACTCCGCCAGCTaGTGCAGAAGCGCATCCTCGGTGCTCACCAGCAAGACGGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: LSSDAQSSLSIDSAS*CRSASSVLTSKTVA Trigger: GGCTACCGTCTTGCTGGTGAGCACCGAGGATGCGCTTCTGCAGCAGCTGGCGGAGTCGATGCTCAAAGATGACTGTGCGTCCGAGCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS CCA 90 bp | CATGGCCAGCGCAGATCTGCAGAATGCGCACCAGACGCCGCGCCATaGCTGCACGAAAGCTTTCCACCCCCTGTGACAAGGAAGCACACT | + |
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Preference number: 5 (lower is better) Translates to: HGQRRSAECAPDAAP*LHESFPPPVTRKHT Trigger: AGTGTGCTTCCTTGTCACAGGGGGTGGAAAGCTTTCGTGCAGCCATGGCGCGGCGTCTGGTGCGCATTCTGCAGATCTGCGCTGGCCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089155.6 |
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| CDS CCA 90 bp | CATGGCCAGCGCAGATCTGCAGAATGCGCACCAGACGCCGCGCCATaGCTGCACGAAAGCTTTCCACCTGTAAATCACAGAGGAGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: HGQRRSAECAPDAAP*LHESFPPVNHRGAA Trigger: CGCTGCTCCTCTGTGATTTACAGGTGGAAAGCTTTCGTGCAGCCATGGCGCGGCGTCTGGTGCGCATTCTGCAGATCTGCGCTGGCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089157.11 |
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| CDS-3UTR CAA 90 bp | ACGAGAAACGGGAGGCTGCTGGGGTCTCGCTGGGCTCTCTCCCGACTCCTGCCCTTCTGGAGACTGTATTaGCTGTGCAGGTTAATCACA | + |
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Preference number: 5 (lower is better) Translates to: TRNGRLLGSRWALSRLLPFWRLY*LCRLIT Trigger: TGTGATTAACCTGCACAGCAAATACAGTCTCCAGAA...GGGCAGGAGTCGGGAGAGAGCCCAGCGAGACCCCAGCAGCCTCCCGTTTCTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR CAA 90 bp | GGCTCTTTGTTCCAAAATCTTAGGTGGATTATGATGTTAGACAGGTGCAGATGGGGCAGAGGGAGGGAGTaGGCCAAGTGGACCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: GSLFQNLRWIMMLDRCRWGRGRE*AKWTLS Trigger: GCTGAGGGTCCACTTGGCCAACTCCCTCCCTCTGCC...CCATCTGCACCTGTCTAACATCATAATCCACCTAAGATTTTGGAACAAAGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS-3UTR CAA 90 bp | CAAAATCTTAGGTGGATTATGATGTTAGACAGGTGCAGATGGGACCTCTGTGGGCAACAGTGGCTGCTTTaGGAACTGGCAGCAAACGTG | + |
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Preference number: 5 (lower is better) Translates to: QNLRWIMMLDRCRWDLCGQQWLL*ELAANV Trigger: CACGTTTGCTGCCAGTTCCAAAAGCAGCCACTGTTG...CCCACAGAGGTCCCATCTGCACCTGTCTAACATCATAATCCACCTAAGATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089155.6 |
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| CDS CCA 90 bp | AGGAAGAAGCTGCTGTCCACGTGCTGCAGAAACTCCTCCACTTTCTaGAGACTGTATTTGCTGTGCAGGTTAATCACAAACACAATCAGG | + |
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Preference number: 5 (lower is better) Translates to: RKKLLSTCCRNSSTF*RLYLLCRLITNTIR Trigger: CCTGATTGTGTTTGTGATTAACCTGCACAGCAAATACAGTCTCCAGAAAGTGGAGGAGTTTCTGCAGCACGTGGACAGCAGCTTCTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 ENSMUST00000229747.2 ENSMUST00000230408.2 |
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| CDS GCA 72 bp | AGACGCCTGGCACATGGCCAGCGCAGATCTGCAGAATaGGCACCAGACGCCGCGCCATGGCTGCACGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RRLAHGQRRSAE*APDAAPWLHES Trigger: GCTTTCGTGCAGCCATGGCGCGGCGTCTGGTGCGCATTCTGCAGATCTGCGCTGGCCATGTGCCAGGCGTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS CCA 72 bp | GGGGCCGGTTCACATTGGAGGGCAGAGGGAGGGAGTTaGCCAAGTGGACCCTCAGCTCGGACGCACAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: GAGSHWRAEGGS*PSGPSARTHSH Trigger: ATGACTGTGCGTCCGAGCTGAGGGTCCACTTGGCCAACTCCCTCCCTCTGCCCTCCAATGTGAACCGGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 ENSMUST00000229747.2 ENSMUST00000230408.2 |
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| CDS CCA 72 bp | CCGCAGCAAGGACATCAGGTTCAGCGCGGAGACGCCTaGCACATGGCCAGCGCAGATCTGCAGAATGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: PQQGHQVQRGDA*HMASADLQNAH Trigger: GTGCGCATTCTGCAGATCTGCGCTGGCCATGTGCCAGGCGTCTCCGCGCTGAACCTGATGTCCTTGCTGCGG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS CCA 72 bp | AAGGACATCAGGTTCAGCGCGGAGACGCCTGGCACATaGCCAGCGCAGATCTGCAGAATGCGCACCAGACGC | + |
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Preference number: 6 (lower is better) Translates to: KDIRFSAETPGT*PAQICRMRTRR Trigger: GCGTCTGGTGCGCATTCTGCAGATCTGCGCTGGCCATGTGCCAGGCGTCTCCGCGCTGAACCTGATGTCCTT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS CAA 90 bp | AGGGAGTTGGCCAAGTGGACCCTCAGCTCGGACGCACAGTCATCTTaGAGCATCGACTCCGCCAGCTGCTGCAGAAGCGCATCCTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: RELAKWTLSSDAQSS*SIDSASCCRSASSV Trigger: CACCGAGGATGCGCTTCTGCAGCAGCTGGCGGAGTCGATGCTCAAAGATGACTGTGCGTCCGAGCTGAGGGTCCACTTGGCCAACTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS CAA 72 bp | GCCAAGTGGACCCTCAGCTCGGACGCACAGTCATCTTaGAGCATCGACTCCGCCAGCTGCTGCAGAAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: AKWTLSSDAQSS*SIDSASCCRSA Trigger: TGCGCTTCTGCAGCAGCTGGCGGAGTCGATGCTCAAAGATGACTGTGCGTCCGAGCTGAGGGTCCACTTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS CAA 90 bp | AGGTCAATTCGGGGCCGGTTCACATTGGAGGGCAGAGGGAGGGAGTaGGCCAAGTGGACCCTCAGCTCGGACGCACAGTCATCTTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: RSIRGRFTLEGRGRE*AKWTLSSDAQSSLS Trigger: GCTCAAAGATGACTGTGCGTCCGAGCTGAGGGTCCACTTGGCCAACTCCCTCCCTCTGCCCTCCAATGTGAACCGGCCCCGAATTGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 ENSMUST00000229747.2 ENSMUST00000230408.2 |
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| CDS TCA 72 bp | CCAAGTGGACCCTCAGCTCGGACGCACAGTCATCTTTaGGCATCGACTCCGCCAGCTGCTGCAGAAGCGCAT | + |
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Preference number: 6 (lower is better) Translates to: PSGPSARTHSHL*ASTPPAAAEAH Trigger: ATGCGCTTCTGCAGCAGCTGGCGGAGTCGATGCTCAAAGATGACTGTGCGTCCGAGCTGAGGGTCCACTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS GCA 72 bp | GCACAGTCATCTTTGAGCATCGACTCCGCCAGCTGCTaGAGAAGCGCATCCTCGGTGCTCACCAGCAAGACG | + |
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Preference number: 6 (lower is better) Translates to: AQSSLSIDSASC*RSASSVLTSKT Trigger: CGTCTTGCTGGTGAGCACCGAGGATGCGCTTCTGCAGCAGCTGGCGGAGTCGATGCTCAAAGATGACTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS GCA 72 bp | GACGCACAGTCATCTTTGAGCATCGACTCCGCCAGCTaGTGCAGAAGCGCATCCTCGGTGCTCACCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: DAQSSLSIDSAS*CRSASSVLTSK Trigger: CTTGCTGGTGAGCACCGAGGATGCGCTTCTGCAGCAGCTGGCGGAGTCGATGCTCAAAGATGACTGTGCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 |
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| CDS CCA 72 bp | TTCACATTGGAGGGCAGAGGGAGGGAGTTGGCCAAGTaGACCCTCAGCTCGGACGCACAGTCATCTTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: FTLEGRGRELAK*TLSSDAQSSLS Trigger: GCTCAAAGATGACTGTGCGTCCGAGCTGAGGGTCCACTTGGCCAACTCCCTCCCTCTGCCCTCCAATGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 ENSMUST00000229747.2 ENSMUST00000230408.2 |
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| CDS CAA 90 bp | AGGTTAATCACAAACACAATCAGGTCAATTCGGGGCCGGTTCACATaGGAGGGCAGAGGGAGGGAGTTGGCCAAGTGGACCCTCAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: RLITNTIRSIRGRFT*EGRGRELAKWTLSS Trigger: CGAGCTGAGGGTCCACTTGGCCAACTCCCTCCCTCTGCCCTCCAATGTGAACCGGCCCCGAATTGACCTGATTGTGTTTGTGATTAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 ENSMUST00000229747.2 ENSMUST00000230408.2 |
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| CDS CCA 72 bp | CAACAGTGGCTGCTTTTGGAACTGGCAGCAAACGTGTaGAGGGCAGTAATGCTCACAGCTCCTTGGATGGGG | + |
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Preference number: 6 (lower is better) Translates to: QQWLLLELAANV*RAVMLTAPWMG Trigger: CCCCATCCAAGGAGCTGTGAGCATTACTGCCCTCCACACGTTTGCTGCCAGTTCCAAAAGCAGCCACTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089155.6 |
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| CDS CAA 90 bp | CTGTCCACGTGCTGCAGAAACTCCTCCACTTTCTGGAGACTGTATTaGCTGTGCAGGTTAATCACAAACACAATCAGGTCAATTCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LSTCCRNSSTFWRLY*LCRLITNTIRSIRG Trigger: GCCCCGAATTGACCTGATTGTGTTTGTGATTAACCTGCACAGCAAATACAGTCTCCAGAAAGTGGAGGAGTTTCTGCAGCACGTGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089155.6 ENSMUST00000089157.11 ENSMUST00000229747.2 ENSMUST00000230408.2 |
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