Pregenerated sensors for CENPL (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026708

Ensembl transcript IDs: ENSMUST00000028035.14, ENSMUST00000111618.8, ENSMUST00000111620.10, ENSMUST00000143486.7, ENSMUST00000192150.6, ENSMUST00000192850.6, ENSMUST00000194855.6, ENSMUST00000195571.2

Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	TCTTCCACCATGTGGGATCCAGGGATCCAATCAGGCCATCCTGCTTaGCAGCCCTTGCCCACTGAGCCGCCGTGCCAGTGCCTTACAGCC	+
Preference number: 1 (lower is better) Translates to: SSTMWDPGIQSGHPA*QPLPTEPPCQCLTA Trigger: GGCTGTAAGGCACTGGCACGGCGGCTCAGTGGGCAAGGGCTGCCAAGCAGGATGGCCTGATTGGATCCCTGGATCCCACATGGTGGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR GCA 90 bp	TGTGGGATCCAGGGATCCAATCAGGCCATCCTGCTTGGCAGCCCTTaGCCACTGAGCCGCCGTGCCAGTGCCTTACAGCCTTTCCTTTAT	+
Preference number: 1 (lower is better) Translates to: CGIQGSNQAILLGSP*PLSRRASALQPFLY Trigger: ATAAAGGAAAGGCTGTAAGGCACTGGCACGGCGGCTCAGTGGGCAAGGGCTGCCAAGCAGGATGGCCTGATTGGATCCCTGGATCCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR TCA 90 bp	TCCAGGGATCCAATCAGGCCATCCTGCTTGGCAGCCCTTGCCCACTaGGCCGCCGTGCCAGTGCCTTACAGCCTTTCCTTTATGAGCTAT	+
Preference number: 1 (lower is better) Translates to: SRDPIRPSCLAALAH*AAVPVPYSLSFMSY Trigger: ATAGCTCATAAAGGAAAGGCTGTAAGGCACTGGCACGGCGGCTCAGTGGGCAAGGGCTGCCAAGCAGGATGGCCTGATTGGATCCCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR TCA 90 bp	CTACCACTATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTaGGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGGCATCGCA	+
Preference number: 1 (lower is better) Translates to: LPLCSISIWATPEAP*DKCSISSTVPLGIA Trigger: TGCGATGCCAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACATAGTGGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
3UTR CCA 90 bp	GGTTCCCTCTTCTGGCCTCCAAGGACACCAGACATAGGACAAGCATaGTGCATGGACATACATGCAGGCAAAACACCCACATACATAAAT	+
Preference number: 1 (lower is better) Translates to: GSLFWPPRTPDIGQA*CMDIHAGKTPTYIN Trigger: ATTTATGTATGTGGGTGTTTTGCCTGCATGTATGTCCATGCACCATGCTTGTCCTATGTCTGGTGTCCTTGGAGGCCAGAAGAGGGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR TCA 90 bp	CTAAGCCATCCCTCTCTCCAGTTCTTGGTTTTTGAGACAAGATTTTaGGTAGCCCATGCTGGCTTTGAACTCTCTACGTTGGCCAGGGAT	+
Preference number: 1 (lower is better) Translates to: LSHPSLQFLVFETRF*VAHAGFELSTLARD Trigger: ATCCCTGGCCAACGTAGAGAGTTCAAAGCCAGCATGGGCTACTCAAAATCTTGTCTCAAAAACCAAGAACTGGAGAGAGGGATGGCTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR TCA 90 bp	GCAAGGAATAAGGGTAGACAGGTGAAGTCTTCTGAGACAGTCTCCTaGAGACTCTCTCCAAACACACAACAGAACCAACCAGTCCACAAC	+
Preference number: 1 (lower is better) Translates to: ARNKGRQVKSSETVS*RLSPNTQQNQPVHN Trigger: GTTGTGGACTGGTTGGTTCTGTTGTGTGTTTGGAGAGAGTCTTCAGGAGACTGTCTCAGAAGACTTCACCTGTCTACCCTTATTCCTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
3UTR TCA 90 bp	ATGTATTGGACTCCGCTCCATTTGCAAGGAATAAGGGTAGACAGGTaGAGTCTTCTGAGACAGTCTCCTGAAGACTCTCTCCAAACACAC	+
Preference number: 1 (lower is better) Translates to: MYWTPLHLQGIRVDR*SLLRQSPEDSLQTH Trigger: GTGTGTTTGGAGAGAGTCTTCAGGAGACTGTCTCAGAAGACTTCACCTGTCTACCCTTATTCCTTGCAAATGGAGCGGAGTCCAATACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
3UTR GCA 90 bp	TCCCTCTTCTGGCCTCCAAGGACACCAGACATAGGACAAGCATGGTaGATGGACATACATGCAGGCAAAACACCCACATACATAAATAAA	+
Preference number: 1 (lower is better) Translates to: SLFWPPRTPDIGQAW*MDIHAGKTPTYINK Trigger: TTTATTTATGTATGTGGGTGTTTTGCCTGCATGTATGTCCATGCACCATGCTTGTCCTATGTCTGGTGTCCTTGGAGGCCAGAAGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR GCA 90 bp	AGACCAAAGAAATTCAGTAGTAGCCATATAACGGTCCATTTTGCATaGTGTCCACATAGCAGCCATCCAGGAAAGATTAAACGCACTGAT	+
Preference number: 1 (lower is better) Translates to: RPKKFSSSHITVHFA*CPHSSHPGKIKRTD Trigger: ATCAGTGCGTTTAATCTTTCCTGGATGGCTGCTATGTGGACAGCATGCAAAATGGACCGTTATATGGCTACTACTGAATTTCTTTGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
3UTR TCA 90 bp	AACGCACTGATTGCTAAAGGACTGAAGCAACAGTCAAAGGTTTTCTaGAACCAGTCTCTGATTAAAGATGTATTGGACTCCGCTCCATTT	+
Preference number: 1 (lower is better) Translates to: NALIAKGLKQQSKVF*NQSLIKDVLDSAPF Trigger: AAATGGAGCGGAGTCCAATACATCTTTAATCAGAGACTGGTTTCAGAAAACCTTTGACTGTTGCTTCAGTCCTTTAGCAATCAGTGCGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
3UTR TCA 90 bp	CTACTAGGCATAGAAAGACAAATATGGCATATGCTCACTCATTTGTaGAACCTAAGAACATCACTCTCGATGAGTAATGGTGCACACCTA	+
Preference number: 1 (lower is better) Translates to: LLGIERQIWHMLTHL*NLRTSLSMSNGAHL Trigger: TAGGTGTGCACCATTACTCATCGAGAGTGATGTTCTTAGGTTTCACAAATGAGTGAGCATATGCCATATTTGTCTTTCTATGCCTAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR TCA 90 bp	GCTCCATTTCTTCCACTGTCCCACTTGGCATCGCAGTTCAGCAAATaGTCAAAACAGTTTATAATGCATCACTTAGTCCATACAAAAATT	+
Preference number: 1 (lower is better) Translates to: APFLPLSHLASQFSK*SKQFIMHHLVHTKI Trigger: AATTTTTGTATGGACTAAGTGATGCATTATAAACTGTTTTGATCATTTGCTGAACTGCGATGCCAAGTGGGACAGTGGAAGAAATGGAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
3UTR-3UTR GCA 90 bp	CTTCCACCATGTGGGATCCAGGGATCCAATCAGGCCATCCTGCTTGGCAGCCCTCCAATCAGGCCATCCTaGTTGGCAGCCCTTGCCCAC	+
Preference number: 2 (lower is better) Translates to: LPPCGIQGSNQAILLGSPPIRPS*LAALAH Trigger: GTGGGCAAGGGCTGCCAAGCAGGATGGCCTGATTGG...AGGGCTGCCAAGCAGGATGGCCTGATTGGATCCCTGGATCCCACATGGTGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR CAA 90 bp	ATGTGGGATCCAGGGATCCAATCAGGCCATCCTGCTTGGCAGCCCTaGCCCACTGAGCCGCCGTGCCAGTGCCTTACAGCCTTTCCTTTA	+
Preference number: 2 (lower is better) Translates to: MWDPGIQSGHPAWQP*PTEPPCQCLTAFPL Trigger: TAAAGGAAAGGCTGTAAGGCACTGGCACGGCGGCTCAGTGGGCAAGGGCTGCCAAGCAGGATGGCCTGATTGGATCCCTGGATCCCACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR CCA 90 bp	GGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACAAAGGTTCCCTCTTCTaGCCTCCAAGGACACCAGAC	+
Preference number: 2 (lower is better) Translates to: GQLQRHPETSAPFLPLSHKGSLF*PPRTPD Trigger: GTCTGGTGTCCTTGGAGGCCAGAAGAGGGAACCTTT...GTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR CCA 90 bp	GAACTTGAACTTGTGGGTGCTGGAACCCCAAATCAGATCCCCTGCAAGAGCATTTCAGGCCATCCTGCTTaGCAGCCCTTGCCCACTGAG	+
Preference number: 2 (lower is better) Translates to: ELELVGAGTPNQIPCKSISGHPA*QPLPTE Trigger: CTCAGTGGGCAAGGGCTGCCAAGCAGGATGGCCTGA...AATGCTCTTGCAGGGGATCTGATTTGGGGTTCCAGCACCCACAAGTTCAAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR GCA 90 bp	CTTCCACCATGTGGGATCCAGGGATCCAATCAGGCCATCCTGCTTGGCAGCCCTCCAAATCAGATCCCCTaGAAGAGCATTACAGTTCTC	+
Preference number: 2 (lower is better) Translates to: LPPCGIQGSNQAILLGSPPNQIP*KSITVL Trigger: GAGAACTGTAATGCTCTTGCAGGGGATCTGATTTGG...AGGGCTGCCAAGCAGGATGGCCTGATTGGATCCCTGGATCCCACATGGTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR TCA 90 bp	ACAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCAACAGGTGAAGTCTTCTaGGACAGTCTCCTGAAGACT	+
Preference number: 2 (lower is better) Translates to: TGHSHSDMLDTQAHERGSTGEVF*DSLLKT Trigger: AGTCTTCAGGAGACTGTCTCAGAAGACTTCACCTGT...TGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
3UTR-3UTR TCA 90 bp	CAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCACTTTCTTTATAGAACATaGACCCATGACGCTGTGTCT	+
Preference number: 2 (lower is better) Translates to: QDTATVICWIHKPMNAAHFLYRT*THDAVS Trigger: AGACACAGCGTCATGGGTTCATGTTCTATAAAGAAA...GTGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR TCA 90 bp	CTTCCAGAGGAACCAGGTTCAATTCCTAGTGGCCAAATGACATCTCATAGCCAAAGGCAGGCGGATTTCTaGGTTCAAGGCCAAGTTCAA	+
Preference number: 2 (lower is better) Translates to: LPEEPGSIPSGQMTSHSQRQADF*VQGQVQ Trigger: TTGAACTTGGCCTTGAACTCAGAAATCCGCCTGCCT...TTGGCTATGAGATGTCATTTGGCCACTAGGAATTGAACCTGGTTCCTCTGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR TCA 90 bp	ACTTGCCTAGTGTGTGTGGGGCACTGTGTTGAATTCCCACCACACACACAGAAATTCCTAGTGGCCAAATaGCATCTCATAGCCAAACTC	+
Preference number: 2 (lower is better) Translates to: TCLVCVGHCVEFPPHTQKFLVAK*HLIAKL Trigger: GAGTTTGGCTATGAGATGTCATTTGGCCACTAGGAA...TTTCTGTGTGTGTGGTGGGAATTCAACACAGTGCCCCACACACACTAGGCAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR GCA 90 bp	ACCACTATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGATTTCTATACCCAACTaGCCTCACAGACAGGTCTGT	+
Preference number: 2 (lower is better) Translates to: TTMFYIHLGNSRGTLRQVISIPN*PHRQVC Trigger: ACAGACCTGTCTGTGAGGGCAGTTGGGTATAGAAAT...CACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACATAGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
3UTR-3UTR GCA 90 bp	TATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCAATTTCTATACCCAACTaGCCTCACAGACAGGTCTGT	+
Preference number: 2 (lower is better) Translates to: YVLYPSGQLQRHPETSAPISIPN*PHRQVC Trigger: ACAGACCTGTCTGTGAGGGCAGTTGGGTATAGAAAT...TGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
3UTR-3UTR CCA 90 bp	AATCAGATCCCCTGCAAGAGCATTACAGTTCTCAACCAGCTGAGCCTGTTTAAAAAAGGTTCCCTCTTCTaGCCTCCAAGGACACCAGAC	+
Preference number: 2 (lower is better) Translates to: NQIPCKSITVLNQLSLFKKGSLF*PPRTPD Trigger: GTCTGGTGTCCTTGGAGGCCAGAAGAGGGAACCTTT...TTTAAACAGGCTCAGCTGGTTGAGAACTGTAATGCTCTTGCAGGGGATCTGATT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR GCA 90 bp	TTGGACTCCGCTCCATTTGCAAGGAATAAGGGTAGACAGGTGAAGTCTTCTGAGATTTCTATACCCAACTaGCCTCACAGACAGGTCTGT	+
Preference number: 2 (lower is better) Translates to: LDSAPFARNKGRQVKSSEISIPN*PHRQVC Trigger: ACAGACCTGTCTGTGAGGGCAGTTGGGTATAGAAAT...CTCAGAAGACTTCACCTGTCTACCCTTATTCCTTGCAAATGGAGCGGAGTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
3UTR-3UTR CCA 90 bp	TTGGACTCCGCTCCATTTGCAAGGAATAAGGGTAGACAGGTGAAGTCTTCTGAGACAAGAAACGCTTCATaGTCCCTTTGTGTCCCTTTC	+
Preference number: 2 (lower is better) Translates to: LDSAPFARNKGRQVKSSETRNAS*SLCVPF Trigger: GAAAGGGACACAAAGGGACCATGAAGCGTTTCTTGT...CTCAGAAGACTTCACCTGTCTACCCTTATTCCTTGCAAATGGAGCGGAGTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6
3UTR CAA 90 bp	GAGACATATGATTACTTGGAGCTAGAGTTACAGAGAGTAGTGAACTaGAACTTGTGGGTGCTGGAACCCCAAATCAGATCCCCTGCAAGA	+
Preference number: 2 (lower is better) Translates to: ETYDYLELELQRVVN*NLWVLEPQIRSPAR Trigger: TCTTGCAGGGGATCTGATTTGGGGTTCCAGCACCCACAAGTTCAAGTTCACTACTCTCTGTAACTCTAGCTCCAAGTAATCATATGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR TCA 90 bp	TATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCAGACTTGTGGGCAAAATaGCACTTTATTCTGTTACTG	+
Preference number: 2 (lower is better) Translates to: YVLYPSGQLQRHPETSAPDLWAK*HFILLL Trigger: CAGTAACAGAATAAAGTGTCATTTTGCCCACAAGTC...TGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR TCA 90 bp	AGTTGTGTGTGTAGGTATATGAATGTGGGTGCCCAAAGAGGCCAGAGACATATGTTCCTAGTGGCCAAATaGCATCTCATAGCCAAACTC	+
Preference number: 2 (lower is better) Translates to: SCVCRYMNVGAQRGQRHMFLVAK*HLIAKL Trigger: GAGTTTGGCTATGAGATGTCATTTGGCCACTAGGAA...CATATGTCTCTGGCCTCTTTGGGCACCCACATTCATATACCTACACACACAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR GCA 90 bp	CAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGACAGCTACTCCTTTTTaGTTTTCGGCAACAATAAAT	+
Preference number: 2 (lower is better) Translates to: QLQRHPETSAPFLPLSHLTATPF*FSATIN Trigger: ATTTATTGTTGCCGAAAAGCAAAAAGGAGTAGCTGT...CAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6
3UTR-3UTR CCA 90 bp	TACACTCTTCCCAAACCCAGATGCCATCATAAAAATATACTCAGTAACAGCCAGAGTTCAAGGCCAGCCTaGTCTACAAGAGTGAGTTCC	+
Preference number: 2 (lower is better) Translates to: YTLPKPRCHHKNILSNSQSSRPA*STRVSS Trigger: GGAACTCACTCTTGTAGACCAGGCTGGCCTTGAACT...CTGGCTGTTACTGAGTATATTTTTATGATGGCATCTGGGTTTGGGAAGAGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028035.14
3UTR-3UTR CCA 90 bp	AAAGATGTATTGGACTCCGCTCCATTTGCAAGGAATAAGGGTAGACAGGTGAAGACAAGAAACGCTTCATaGTCCCTTTGTGTCCCTTTC	+
Preference number: 2 (lower is better) Translates to: KDVLDSAPFARNKGRQVKTRNAS*SLCVPF Trigger: GAAAGGGACACAAAGGGACCATGAAGCGTTTCTTGT...CTTCACCTGTCTACCCTTATTCCTTGCAAATGGAGCGGAGTCCAATACATCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6
3UTR CAA 90 bp	GACTTTGGACTATTGATCCTCCTGCTTCTGCCTCCCAAGTGCCTTTaGTTTTTAATGCTTAGTGCTTTCCATCAAAATTATGCTCCAGCC	+
Preference number: 2 (lower is better) Translates to: DFGLLILLLLPPKCL*FLMLSAFHQNYAPA Trigger: GGCTGGAGCATAATTTTGATGGAAAGCACTAAGCATTAAAAACAAAAGGCACTTGGGAGGCAGAAGCAGGAGGATCAATAGTCCAAAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR TCA 90 bp	AGTTGTGTGTGTAGGTATATGAATGTGGGTGCCCAAAGAGGCCAGAGACATATGGACTTGTGGGCAAAATaGCACTTTATTCTGTTACTG	+
Preference number: 2 (lower is better) Translates to: SCVCRYMNVGAQRGQRHMDLWAK*HFILLL Trigger: CAGTAACAGAATAAAGTGTCATTTTGCCCACAAGTC...CATATGTCTCTGGCCTCTTTGGGCACCCACATTCATATACCTACACACACAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR TCA 90 bp	CTTCCAGAGGAACCAGGTTCAATTCCTAGTGGCCAAATGACATCTCATAGCCAATTTCTTTATAGAACATaGACCCATGACGCTGTGTCT	+
Preference number: 2 (lower is better) Translates to: LPEEPGSIPSGQMTSHSQFLYRT*THDAVS Trigger: AGACACAGCGTCATGGGTTCATGTTCTATAAAGAAA...TTGGCTATGAGATGTCATTTGGCCACTAGGAATTGAACCTGGTTCCTCTGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR TCA 90 bp	TTGGACTCCGCTCCATTTGCAAGGAATAAGGGTAGACAGGTGAAGTCTTCTGAGTGTTCACGTGATGACTaGGATTTTGAGAGAATCTTA	+
Preference number: 2 (lower is better) Translates to: LDSAPFARNKGRQVKSSECSRDD*DFERIL Trigger: TAAGATTCTCTCAAAATCTCAGTCATCACGTGAACA...CTCAGAAGACTTCACCTGTCTACCCTTATTCCTTGCAAATGGAGCGGAGTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
3UTR-3UTR GCA 90 bp	ATAGCAGCCATCCAGGAAAGATTAAACGCACTGATTGCTAAAGGACTGAAGCAAATTTCTATACCCAACTaGCCTCACAGACAGGTCTGT	+
Preference number: 2 (lower is better) Translates to: IAAIQERLNALIAKGLKQISIPN*PHRQVC Trigger: ACAGACCTGTCTGTGAGGGCAGTTGGGTATAGAAAT...TTGCTTCAGTCCTTTAGCAATCAGTGCGTTTAATCTTTCCTGGATGGCTGCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
3UTR-3UTR TCA 90 bp	ATGCTTAGTGCTTTCCATCAAAATTATGCTCCAGCCTATTATTTCATTTTGACCTGTGGGGCACTGTGTTaGATTCCCACCACACACACA	+
Preference number: 2 (lower is better) Translates to: MLSAFHQNYAPAYYFILTCGALC*IPTTHT Trigger: TGTGTGTGTGGTGGGAATTCAACACAGTGCCCCACA...GGTCAAAATGAAATAATAGGCTGGAGCATAATTTTGATGGAAAGCACTAAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR GCA 90 bp	AAGTATGTACAAATAGGACAGAAAAAGCATGACTCAGTGGCCGAGTACTTGCCTTACTCAGCTCTACAGTaGACAAAACATAGTGGCCTT	+
Preference number: 2 (lower is better) Translates to: KYVQIGQKKHDSVAEYLPYSALQ*TKHSGL Trigger: AAGGCCACTATGTTTTGTGCACTGTAGAGCTGAGTA...AGGCAAGTACTCGGCCACTGAGTCATGCTTTTTCTGTCCTATTTGTACATACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR GCA 90 bp	AGTTGTGTGTGTAGGTATATGAATGTGGGTGCCCAAAGAGGCCAGAGACATATGATGCATGTTTGTATGTaGATGTCACAGCACATGTAT	+
Preference number: 2 (lower is better) Translates to: SCVCRYMNVGAQRGQRHMMHVCM*MSQHMY Trigger: ATACATGTGCTGTGACATGCACATACAAACATGCAT...CATATGTCTCTGGCCTCTTTGGGCACCCACATTCATATACCTACACACACAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR GCA 90 bp	TATGACACAGAATCTTTATTTTCCCATCAGTGTGTGCTGAAGCTACAGATGTTGACGGTCCATTTTGCATaGTGTCCACATAGCAGCCAT	+
Preference number: 2 (lower is better) Translates to: YDTESLFSHQCVLKLQMLTVHFA*CPHSSH Trigger: ATGGCTGCTATGTGGACAGCATGCAAAATGGACCGT...CAACATCTGTAGCTTCAGCACACACTGATGGGAAAATAAAGATTCTGTGTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6
3UTR-3UTR GCA 90 bp	GTCCACATAGCAGCCATCCAGGAAAGATTAAACGCACTGATTGCTAAAGGACTGACAGCTACTCCTTTTTaGTTTTCGGCAACAATAAAT	+
Preference number: 2 (lower is better) Translates to: VHIAAIQERLNALIAKGLTATPF*FSATIN Trigger: ATTTATTGTTGCCGAAAAGCAAAAAGGAGTAGCTGT...CAGTCCTTTAGCAATCAGTGCGTTTAATCTTTCCTGGATGGCTGCTATGTGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6
3UTR-3UTR TCA 90 bp	AACAATTCAGCATCTTTTATAACAGGACACAGCCACAGTGATATGCTGGATACATGTTCACGTGATGACTaGGATTTTGAGAGAATCTGG	+
Preference number: 2 (lower is better) Translates to: NNSASFITGHSHSDMLDTCSRDD*DFERIW Trigger: CCAGATTCTCTCAAAATCTCAGTCATCACGTGAACA...TGTATCCAGCATATCACTGTGGCTGTGTCCTGTTATAAAAGATGCTGAATTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143486.7
3UTR-3UTR CCA 90 bp	ATGCTTAGTGCTTTCCATCAAAATTATGCTCCAGCCTATTATTTCATTTTGACCGACATAGGACAAGCATaGTGCATGGACATACATGCA	+
Preference number: 2 (lower is better) Translates to: MLSAFHQNYAPAYYFILTDIGQA*CMDIHA Trigger: TGCATGTATGTCCATGCACCATGCTTGTCCTATGTC...GGTCAAAATGAAATAATAGGCTGGAGCATAATTTTGATGGAAAGCACTAAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR CCA 90 bp	AACAATTCAGCATCTTTTATAACAGGACACAGCCACAGTGATATGCTGGATACAGATTTTGAGAGAATCTaGACAAGAAACGCTTCATGG	+
Preference number: 2 (lower is better) Translates to: NNSASFITGHSHSDMLDTDFERI*TRNASW Trigger: CCATGAAGCGTTTCTTGTCCAGATTCTCTCAAAATC...TGTATCCAGCATATCACTGTGGCTGTGTCCTGTTATAAAAGATGCTGAATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143486.7
3UTR-3UTR GCA 90 bp	ATGCTTAGTGCTTTCCATCAAAATTATGCTCCAGCCTATTATTTCATTTTGACCGACTCTCAGGTTCTCTaGAAAAGGAGTAAGTGCTAT	+
Preference number: 2 (lower is better) Translates to: MLSAFHQNYAPAYYFILTDSQVL*KRSKCY Trigger: ATAGCACTTACTCCTTTTGCAGAGAACCTGAGAGTC...GGTCAAAATGAAATAATAGGCTGGAGCATAATTTTGATGGAAAGCACTAAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR TCA 90 bp	AAGACAGTATTAGGAGACAAGCAATTTGATTATTTGTGGGGTTTTACCATGGTTTGTTCACGTGATGACTaGGATTTTGAGAGAATCTTA	+
Preference number: 2 (lower is better) Translates to: KTVLGDKQFDYLWGFTMVCSRDD*DFERIL Trigger: TAAGATTCTCTCAAAATCTCAGTCATCACGTGAACA...AACCATGGTAAAACCCCACAAATAATCAAATTGCTTGTCTCCTAATACTGTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000195571.2
3UTR GCA 72 bp	CAGGGATCCAATCAGGCCATCCTGCTTGGCAGCCCTTaGCCACTGAGCCGCCGTGCCAGTGCCTTACAGCCT	+
Preference number: 3 (lower is better) Translates to: QGSNQAILLGSP*PLSRRASALQP Trigger: AGGCTGTAAGGCACTGGCACGGCGGCTCAGTGGGCAAGGGCTGCCAAGCAGGATGGCCTGATTGGATCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR CAA 90 bp	CAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGGCATCGACCTCCCCAGGGGTTTaGTGGACACTTTCCCATAAA	+
Preference number: 3 (lower is better) Translates to: QRHPETSAPFLPLSHLASTSPGV*WTLSHK Trigger: TTTATGGGAAAGTGTCCACAAAACCCCTGGGGAGGT...CGATGCCAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
3UTR GCA 72 bp	GAACTTGTGGGTGCTGGAACCCCAAATCAGATCCCCTaGAAGAGCATTACAGTTCTCAACCAGCTGAGCCTG	+
Preference number: 3 (lower is better) Translates to: ELVGAGTPNQIP*KSITVLNQLSL Trigger: CAGGCTCAGCTGGTTGAGAACTGTAATGCTCTTGCAGGGGATCTGATTTGGGGTTCCAGCACCCACAAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR GCA 72 bp	TGGCCTCCAAGGACACCAGACATAGGACAAGCATGGTaGATGGACATACATGCAGGCAAAACACCCACATAC	+
Preference number: 3 (lower is better) Translates to: WPPRTPDIGQAW*MDIHAGKTPTY Trigger: GTATGTGGGTGTTTTGCCTGCATGTATGTCCATGCACCATGCTTGTCCTATGTCTGGTGTCCTTGGAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR CCA 72 bp	TTCTGGCCTCCAAGGACACCAGACATAGGACAAGCATaGTGCATGGACATACATGCAGGCAAAACACCCACA	+
Preference number: 3 (lower is better) Translates to: FWPPRTPDIGQA*CMDIHAGKTPT Trigger: TGTGGGTGTTTTGCCTGCATGTATGTCCATGCACCATGCTTGTCCTATGTCTGGTGTCCTTGGAGGCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR CAA 90 bp	AAGACAGTATTAGGAGACAAGCAATTTGATTATTTGTGGGGTTTTACCATGGTTCCTGCTTGGCAGCCCTaGCCCACTGAGCCGCCGTGC	+
Preference number: 3 (lower is better) Translates to: KTVLGDKQFDYLWGFTMVPAWQP*PTEPPC Trigger: GCACGGCGGCTCAGTGGGCAAGGGCTGCCAAGCAGG...AACCATGGTAAAACCCCACAAATAATCAAATTGCTTGTCTCCTAATACTGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR TCA 72 bp	GCCGAGTACTTGCCTAGTGTGTGTGGGGCACTGTGTTaGATTCCCACCACACACACAGAAAAGGACAAATAC	+
Preference number: 3 (lower is better) Translates to: AEYLPSVCGALC*IPTTHTEKDKY Trigger: GTATTTGTCCTTTTCTGTGTGTGTGGTGGGAATTCAACACAGTGCCCCACACACACTAGGCAAGTACTCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR TCA 72 bp	TGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTaGGACAAGTGCTCCATTTCTTCCACTGTCCCACTT	+
Preference number: 3 (lower is better) Translates to: CSISIWATPEAP*DKCSISSTVPL Trigger: AAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
3UTR CCA 72 bp	GGAACGGATGTTACAGTAGTTCTGACCTGCCCAGTATaGGTACTAGGAACTAGACTCTCAGGTTCTCTGCAA	+
Preference number: 3 (lower is better) Translates to: GTDVTVVLTCPV*VLGTRLSGSLQ Trigger: TTGCAGAGAACCTGAGAGTCTAGTTCCTAGTACCCATACTGGGCAGGTCAGAACTACTGTAACATCCGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR CAA 90 bp	GAACTTGAACTTGTGGGTGCTGGAACCCCAAATCAGATCCCCTGCAAGAGCATTCTGAAGCTACAGATGTaGAGACACGAACCAATCTTG	+
Preference number: 3 (lower is better) Translates to: ELELVGAGTPNQIPCKSILKLQM*RHEPIL Trigger: CAAGATTGGTTCGTGTCTCAACATCTGTAGCTTCAG...AATGCTCTTGCAGGGGATCTGATTTGGGGTTCCAGCACCCACAAGTTCAAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195571.2
3UTR-3UTR CAA 90 bp	CATAAGAAATATCTAAGCTCTGTGGGCTACAGGGCACAGACCAAAGAAATTCAGTGGACTCCGCTCCATTaGCAAGGAATAAGGGTAGAC	+
Preference number: 3 (lower is better) Translates to: HKKYLSSVGYRAQTKEIQWTPLH*QGIRVD Trigger: GTCTACCCTTATTCCTTGCAAATGGAGCGGAGTCCA...CTGAATTTCTTTGGTCTGTGCCCTGTAGCCCACAGAGCTTAGATATTTCTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
3UTR-3UTR CAA 90 bp	AGTTGTGTGTGTAGGTATATGAATGTGGGTGCCCAAAGAGGCCAGAGACATATGTGTCTTTATGCATGTTaGTATGTGCATGTCACAGCA	+
Preference number: 3 (lower is better) Translates to: SCVCRYMNVGAQRGQRHMCLYAC*YVHVTA Trigger: TGCTGTGACATGCACATACAAACATGCATAAAGACA...CATATGTCTCTGGCCTCTTTGGGCACCCACATTCATATACCTACACACACAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR CAA 90 bp	GCATCTTTTATAACAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGTGATGACTGAGATTTaGAGAGAATCTGGACAAGAA	+
Preference number: 3 (lower is better) Translates to: ASFITGHSHSDMLDTQAHVMTEI*RESGQE Trigger: TTCTTGTCCAGATTCTCTCAAAATCTCAGTCATCAC...ATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTGTTATAAAAGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143486.7
3UTR-3UTR CAA 90 bp	AAATCTAGAGGTGAAAAATCAAGGAAGTCAGGAAGGAACCTCAGAGGCAAGCCCTTTCCCATAAAGCTTTaGCATCTTCTGGATGTATTG	+
Preference number: 3 (lower is better) Translates to: KSRGEKSRKSGRNLRGKPFPIKL*HLLDVL Trigger: CAATACATCCAGAAGATGCAAAAGCTTTATGGGAAA...GGGCTTGCCTCTGAGGTTCCTTCCTGACTTCCTTGATTTTTCACCTCTAGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143486.7
3UTR TCA 72 bp	CTTCCACTGTCCCACTTGGCATCGCAGTTCAGCAAATaGTCAAAACAGTTTATAATGCATCACTTAGTCCAT	+
Preference number: 3 (lower is better) Translates to: LPLSHLASQFSK*SKQFIMHHLVH Trigger: ATGGACTAAGTGATGCATTATAAACTGTTTTGATCATTTGCTGAACTGCGATGCCAAGTGGGACAGTGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
3UTR-3UTR CAA 90 bp	TGCCATCATAAAAATATACTCAGTAACAGCCAGGACACAATGTCTCCACTAGAGTATAATCTCACTACTTaGGAAGGGAGGCAATTCAGC	+
Preference number: 3 (lower is better) Translates to: CHHKNILSNSQDTMSPLEYNLTT*EGRQFS Trigger: GCTGAATTGCCTCCCTTCCAAAGTAGTGAGATTATA...CTCTAGTGGAGACATTGTGTCCTGGCTGTTACTGAGTATATTTTTATGATGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028035.14
3UTR-3UTR CAA 90 bp	TACACTCTTCCCAAACCCAGATGCCATCATAAAAATATACTCAGTAACAGCCAGGTAATTTGGCCTTTCTaGAGTCATACTATGCCCATA	+
Preference number: 3 (lower is better) Translates to: YTLPKPRCHHKNILSNSQVIWPF*SHTMPI Trigger: TATGGGCATAGTATGACTCAAGAAAGGCCAAATTAC...CTGGCTGTTACTGAGTATATTTTTATGATGGCATCTGGGTTTGGGAAGAGTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028035.14
3UTR-3UTR CAA 90 bp	TATGACACAGAATCTTTATTTTCCCATCAGTGTGTGCTGAAGCTACAGATGTTGGTGGAGAAAATCACTTaGATGTTGAAGTCTTCTCCC	+
Preference number: 3 (lower is better) Translates to: YDTESLFSHQCVLKLQMLVEKIT*MLKSSP Trigger: GGGAGAAGACTTCAACATCAAAGTGATTTTCTCCAC...CAACATCTGTAGCTTCAGCACACACTGATGGGAAAATAAAGATTCTGTGTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6
3UTR-3UTR CAA 90 bp	CTGAAGCTACAGATGTTGAGACACGAACCAATCTTGTGGCTGCTAAGTGAATTTTTTCCCATAAAGCTTTaGCATCTTCTGGATGTATTG	+
Preference number: 3 (lower is better) Translates to: LKLQMLRHEPILWLLSEFFPIKL*HLLDVL Trigger: CAATACATCCAGAAGATGCAAAAGCTTTATGGGAAA...AAATTCACTTAGCAGCCACAAGATTGGTTCGTGTCTCAACATCTGTAGCTTCAG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
3UTR-3UTR CAA 90 bp	ATTAACAATTCAGCATCTTTTATAACAGGACACAGCCACAGTGATATGCTGGATCTGAAGCTACAGATGTaGAGACACGAACCAATCTTG	+
Preference number: 3 (lower is better) Translates to: INNSASFITGHSHSDMLDLKLQM*RHEPIL Trigger: CAAGATTGGTTCGTGTCTCAACATCTGTAGCTTCAG...ATCCAGCATATCACTGTGGCTGTGTCCTGTTATAAAAGATGCTGAATTGTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
3UTR GCA 72 bp	AAATTCAGTAGTAGCCATATAACGGTCCATTTTGCATaGTGTCCACATAGCAGCCATCCAGGAAAGATTAAA	+
Preference number: 3 (lower is better) Translates to: KFSSSHITVHFA*CPHSSHPGKIK Trigger: TTTAATCTTTCCTGGATGGCTGCTATGTGGACAGCATGCAAAATGGACCGTTATATGGCTACTACTGAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
3UTR CCA 72 bp	TATGCATGTTTGTATGTGCATGTCACAGCACATGTATaGAAGTCAGAGGATAACTTTCAGGAGTTAGTTCTC	+
Preference number: 3 (lower is better) Translates to: YACLYVHVTAHV*KSEDNFQELVL Trigger: GAGAACTAACTCCTGAAAGTTATCCTCTGACTTCCATACATGTGCTGTGACATGCACATACAAACATGCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR-3UTR CAA 90 bp	GAAAGATTAAACGCACTGATTGCTAAAGGACTGAAGCAACAGTCAAAGGTTTTCAAAATCACTTTGATGTaGAAGTCTTCTCCCACTTCC	+
Preference number: 3 (lower is better) Translates to: ERLNALIAKGLKQQSKVFKITLM*KSSPTS Trigger: GGAAGTGGGAGAAGACTTCAACATCAAAGTGATTTT...GAAAACCTTTGACTGTTGCTTCAGTCCTTTAGCAATCAGTGCGTTTAATCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6
3UTR TCA 72 bp	TTTCTAGTGGCAGCAGAAAGGGACTTGTGGGCAAAATaGCACTTTATTCTGTTACTGGGTATAATTTTATCC	+
Preference number: 3 (lower is better) Translates to: FLVAAERDLWAK*HFILLLGIILS Trigger: GGATAAAATTATACCCAGTAACAGAATAAAGTGTCATTTTGCCCACAAGTCCCTTTCTGCTGCCACTAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
3UTR TCA 72 bp	ATTGCTAAAGGACTGAAGCAACAGTCAAAGGTTTTCTaGAACCAGTCTCTGATTAAAGATGTATTGGACTCC	+
Preference number: 3 (lower is better) Translates to: IAKGLKQQSKVF*NQSLIKDVLDS Trigger: GGAGTCCAATACATCTTTAATCAGAGACTGGTTTCAGAAAACCTTTGACTGTTGCTTCAGTCCTTTAGCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
3UTR TCA 72 bp	AGACACGAACCAATCTTGTGGCTGCTAAGTGAATTTTaGAATGCCTATGGAAATGTGAATAAAGGCAGTTCA	+
Preference number: 3 (lower is better) Translates to: RHEPILWLLSEF*NAYGNVNKGSS Trigger: TGAACTGCCTTTATTCACATTTCCATAGGCATTTCAAAATTCACTTAGCAGCCACAAGATTGGTTCGTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
3UTR GCA 72 bp	ATCAACATCATGTATTACACTCTTCCCAAACCCAGATaGCATCATAAAAATATACTCAGTAACAGCCAGGAC	+
Preference number: 3 (lower is better) Translates to: INIMYYTLPKPR*HHKNILSNSQD Trigger: GTCCTGGCTGTTACTGAGTATATTTTTATGATGGCATCTGGGTTTGGGAAGAGTGTAATACATGATGTTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000143486.7
3UTR CAA 72 bp	CCAGGGATCCAATCAGGCCATCCTGCTTGGCAGCCCTaGCCCACTGAGCCGCCGTGCCAGTGCCTTACAGCC	+
Preference number: 4 (lower is better) Translates to: PGIQSGHPAWQP*PTEPPCQCLTA Trigger: GGCTGTAAGGCACTGGCACGGCGGCTCAGTGGGCAAGGGCTGCCAAGCAGGATGGCCTGATTGGATCCCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	GGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACGGATCGATATCTTCCTaGAACTGTGAACACTGGGGA	+
Preference number: 4 (lower is better) Translates to: GQLQRHPETSAPFLPLSHGSISS*NCEHWG Trigger: TCCCCAGTGTTCACAGTTGCAGGAAGATATCGATCC...GTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	CCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTGGACTGGGAAAATCTaGATTCTGCCTCCTGACCAA	+
Preference number: 4 (lower is better) Translates to: PSGQLQRHPETSAPFLPLWTGKI*ILPPDQ Trigger: TTGGTCAGGAGGCAGAATTCAGATTTTCCCAGTCCA...CAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	CTTCCACCATGTGGGATCCAGGGATCCAATCAGGCCATCCTGCTTGGCAGCCCTTGTTCACGTGATGACTaGGATTTTGAGAGAATCTGG	+
Preference number: 4 (lower is better) Translates to: LPPCGIQGSNQAILLGSPCSRDD*DFERIW Trigger: CCAGATTCTCTCAAAATCTCAGTCATCACGTGAACA...AGGGCTGCCAAGCAGGATGGCCTGATTGGATCCCTGGATCCCACATGGTGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028035.14
CDS-3UTR TCA 90 bp	CAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGGCATCGACAGGTGAAGTCTTCTaGGACAGTCTCCTGAAGACT	+
Preference number: 4 (lower is better) Translates to: QRHPETSAPFLPLSHLASTGEVF*DSLLKT Trigger: AGTCTTCAGGAGACTGTCTCAGAAGACTTCACCTGT...CGATGCCAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR TCA 90 bp	CCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGACAGGTGAAGTCTTCTaGGACAGTCTCCTGAAGACT	+
Preference number: 4 (lower is better) Translates to: PSGQLQRHPETSAPFLPLTGEVF*DSLLKT Trigger: AGTCTTCAGGAGACTGTCTCAGAAGACTTCACCTGT...CAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR GCA 90 bp	CTTCCACCATGTGGGATCCAGGGATCCAATCAGGCCATCCTGCTTGGCAGCCCTTTTGTGGAGGAGAAATaGAACCTTCTGAGGATCGAT	+
Preference number: 4 (lower is better) Translates to: LPPCGIQGSNQAILLGSPFVEEK*NLLRID Trigger: ATCGATCCTCAGAAGGTTGCATTTCTCCTCCACAAA...AGGGCTGCCAAGCAGGATGGCCTGATTGGATCCCTGGATCCCACATGGTGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	CCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGGTTTCTGCAGAGGGGTaGCACCTACAAAGTAGTTCT	+
Preference number: 4 (lower is better) Translates to: PSGQLQRHPETSAPFLPLVSAEG*HLQSSS Trigger: AGAACTACTTTGTAGGTGCCACCCCTCTGCAGAAAC...CAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	GCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCACCCACTACCAGTTTCTGCAGAGGGGTaGCACCTACAAAGTAGTTCT	+
Preference number: 4 (lower is better) Translates to: ATVICWIHKPMNAAHPLPVSAEG*HLQSSS Trigger: AGAACTACTTTGTAGGTGCCACCCCTCTGCAGAAAC...TGGTAGTGGGTGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	GGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTGTTTCTGCAGAGGGGTaGCACCTACAAAGTAGTTCT	+
Preference number: 4 (lower is better) Translates to: GNSRGTLRQVLHFFHCPTVSAEG*HLQSSS Trigger: AGAACTACTTTGTAGGTGCCACCCCTCTGCAGAAAC...AGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	CTTCCACCATGTGGGATCCAGGGATCCAATCAGGCCATCCTGCTTGGCAGCCCTATAGTCCACTGTTTGTaGAGGAGAAATGCAACCTTC	+
Preference number: 4 (lower is better) Translates to: LPPCGIQGSNQAILLGSPIVHCL*RRNATF Trigger: GAAGGTTGCATTTCTCCTCCACAAACAGTGGACTAT...AGGGCTGCCAAGCAGGATGGCCTGATTGGATCCCTGGATCCCACATGGTGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	ATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATAGAGCCCTCTTACCCTaGGCAGGTAAGCCTGGACAA	+
Preference number: 4 (lower is better) Translates to: MFYIHLGNSRGTLRQVLHRALLP*AGKPGQ Trigger: TTGTCCAGGCTTACCTGCCCAGGGTAAGAGGGCTCT...ATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	CAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGCTGAATTCTGCCTCCTaGCCAATTCCAGTCGTTTCT	+
Preference number: 4 (lower is better) Translates to: QLQRHPETSAPFLPLSHLLNSAS*PIPVVS Trigger: AGAAACGACTGGAATTGGTCAGGAGGCAGAATTCAG...CAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	ACAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCAGGATCGATATCTTCCTaGAACTGTGAACACTGGGGA	+
Preference number: 4 (lower is better) Translates to: TGHSHSDMLDTQAHERGSGSISS*NCEHWG Trigger: TCCCCAGTGTTCACAGTTGCAGGAAGATATCGATCC...TGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	AACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGGACGGTCCATTTTGCATaGTGTCCACATAGCAGCCAT	+
Preference number: 4 (lower is better) Translates to: NSRGTLRQVLHFFHCPTWTVHFA*CPHSSH Trigger: ATGGCTGCTATGTGGACAGCATGCAAAATGGACCGT...CCAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR GCA 90 bp	GGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACAAGTCTAGAATAGTCTaGAACTGTGAACACTGGGGA	+
Preference number: 4 (lower is better) Translates to: GQLQRHPETSAPFLPLSHKSRIV*NCEHWG Trigger: TCCCCAGTGTTCACAGTTGCAGACTATTCTAGACTT...GTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6
CDS-3UTR CCA 90 bp	CAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCACACAAGAAACGCTTCATaGTCCCTTTGTGTCCCTTTC	+
Preference number: 4 (lower is better) Translates to: QDTATVICWIHKPMNAAHTRNAS*SLCVPF Trigger: GAAAGGGACACAAAGGGACCATGAAGCGTTTCTTGT...GTGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	GGGTGCTGGAACCCCAAATCAGATCCCCTGCAAGAGCATTACAGTTCTCAACCATGGACTGGGAAAATCTaGATTCTGCCTCCTGACCAA	+
Preference number: 4 (lower is better) Translates to: GCWNPKSDPLQEHYSSQPWTGKI*ILPPDQ Trigger: TTGGTCAGGAGGCAGAATTCAGATTTTCCCAGTCCA...TGGTTGAGAACTGTAATGCTCTTGCAGGGGATCTGATTTGGGGTTCCAGCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	ACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCACCCACTACCACTATGGACTGGGAAAATCTaGATTCTGCCTCCTGACCAA	+
Preference number: 4 (lower is better) Translates to: TVICWIHKPMNAAHPLPLWTGKI*ILPPDQ Trigger: TTGGTCAGGAGGCAGAATTCAGATTTTCCCAGTCCA...TAGTGGTAGTGGGTGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	CAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCACCTTGTGGCTGCTAAGTaGATTTTGAAATGCCTATGG	+
Preference number: 4 (lower is better) Translates to: QDTATVICWIHKPMNAAHLVAAK*ILKCLW Trigger: CCATAGGCATTTCAAAATTCACTTAGCAGCCACAAG...GTGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR TCA 90 bp	GCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCACCCACTACCACTTGTGGCTGCTAAGTaGATTTTGAAATGCCTATGG	+
Preference number: 4 (lower is better) Translates to: ATVICWIHKPMNAAHPLPLVAAK*ILKCLW Trigger: CCATAGGCATTTCAAAATTCACTTAGCAGCCACAAG...TGGTAGTGGGTGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR GCA 90 bp	GGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTGGAAAATCTGAATTCTaGCTCCTGACCAATTCCAGT	+
Preference number: 4 (lower is better) Translates to: GNSRGTLRQVLHFFHCPTGKSEF*LLTNSS Trigger: ACTGGAATTGGTCAGGAGGCAGAATTCAGATTTTCC...AGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	CCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTTTGTGGAGGAGAAATaGAACCTTCTGAGGATCGAT	+
Preference number: 4 (lower is better) Translates to: PSGQLQRHPETSAPFLPLFVEEK*NLLRID Trigger: ATCGATCCTCAGAAGGTTGCATTTCTCCTCCACAAA...CAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	ACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCACCCACTACCACTAACGGTCCATTTTGCATaGTGTCCACATAGCAGCCAT	+
Preference number: 4 (lower is better) Translates to: TVICWIHKPMNAAHPLPLTVHFA*CPHSSH Trigger: ATGGCTGCTATGTGGACAGCATGCAAAATGGACCGT...TAGTGGTAGTGGGTGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR CCA 90 bp	TCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGGCATTCCTTCGAGATGGACTaGGAAAATCTGAATTCTGCC	+
Preference number: 4 (lower is better) Translates to: SRGTLRQVLHFFHCPTWHSFEMD*ENLNSA Trigger: GGCAGAATTCAGATTTTCCCAGTCCATCTCGAAGGA...ATGCCAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	AACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGGTCCTTCGAGATGGACTaGGAAAATCTGAATTCTGCC	+
Preference number: 4 (lower is better) Translates to: NSRGTLRQVLHFFHCPTWSFEMD*ENLNSA Trigger: GGCAGAATTCAGATTTTCCCAGTCCATCTCGAAGGA...CCAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	ACAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCATCCTTCGAGATGGACTaGGAAAATCTGAATTCTGCC	+
Preference number: 4 (lower is better) Translates to: TGHSHSDMLDTQAHERGSSFEMD*ENLNSA Trigger: GGCAGAATTCAGATTTTCCCAGTCCATCTCGAAGGA...TGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	CCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGATAGTCCACTGTTTGTaGAGGAGAAATGCAACCTTC	+
Preference number: 4 (lower is better) Translates to: PSGQLQRHPETSAPFLPLIVHCL*RRNATF Trigger: GAAGGTTGCATTTCTCCTCCACAAACAGTGGACTAT...CAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	ACAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCAACAAGAAACGCTTCATaGTCCCTTTGTGTCCCTTTC	+
Preference number: 4 (lower is better) Translates to: TGHSHSDMLDTQAHERGSTRNAS*SLCVPF Trigger: GAAAGGGACACAAAGGGACCATGAAGCGTTTCTTGT...TGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	ACTTGCCTAGTGTGTGTGGGGCACTGTGTTGAATTCCCACCACACACACAGAAACTGAATTCTGCCTCCTaGCCAATTCCAGTCGTTTCT	+
Preference number: 4 (lower is better) Translates to: TCLVCVGHCVEFPPHTQKLNSAS*PIPVVS Trigger: AGAAACGACTGGAATTGGTCAGGAGGCAGAATTCAG...TTTCTGTGTGTGTGGTGGGAATTCAACACAGTGCCCCACACACACTAGGCAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	CACTACCACTATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACACTGAATTCTGCCTCCTaGCCAATTCCAGTCGTTTCT	+
Preference number: 4 (lower is better) Translates to: HYHYVLYPSGQLQRHPETLNSAS*PIPVVS Trigger: AGAAACGACTGGAATTGGTCAGGAGGCAGAATTCAG...TGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACATAGTGGTAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	GTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTTGGACTGGGAAAATCTaGATTCTGCCTCCTGACCAA	+
Preference number: 4 (lower is better) Translates to: VLYPSGQLQRHPETSAPFWTGKI*ILPPDQ Trigger: TTGGTCAGGAGGCAGAATTCAGATTTTCCCAGTCCA...AAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	TCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGGCATAATAGTCTGCAACTGTaGACACTGGGGAATTTTCCT	+
Preference number: 4 (lower is better) Translates to: SRGTLRQVLHFFHCPTWHNSLQL*TLGNFP Trigger: AGGAAAATTCCCCAGTGTTCACAGTTGCAGACTATT...ATGCCAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6
CDS-3UTR GCA 90 bp	CAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGGGAAAATCTGAATTCTaGCTCCTGACCAATTCCAGT	+
Preference number: 4 (lower is better) Translates to: QLQRHPETSAPFLPLSHLGKSEF*LLTNSS Trigger: ACTGGAATTGGTCAGGAGGCAGAATTCAGATTTTCC...CAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	ATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATGGATCGATATCTTCCTaGAACTGTGAACACTGGGGA	+
Preference number: 4 (lower is better) Translates to: MFYIHLGNSRGTLRQVLHGSISS*NCEHWG Trigger: TCCCCAGTGTTCACAGTTGCAGGAAGATATCGATCC...ATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	AACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGGTGCAACTGTGAACACTaGGGAATTTTCCTTCGAGAT	+
Preference number: 4 (lower is better) Translates to: NSRGTLRQVLHFFHCPTWCNCEH*GIFLRD Trigger: ATCTCGAAGGAAAATTCCCCAGTGTTCACAGTTGCA...CCAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	ACAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCATGCAACTGTGAACACTaGGGAATTTTCCTTCGAGAT	+
Preference number: 4 (lower is better) Translates to: TGHSHSDMLDTQAHERGSCNCEH*GIFLRD Trigger: ATCTCGAAGGAAAATTCCCCAGTGTTCACAGTTGCA...TGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	CAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGATAGTCCACTGTTTGTaGAGGAGAAATGCAACCTTC	+
Preference number: 4 (lower is better) Translates to: QLQRHPETSAPFLPLSHLIVHCL*RRNATF Trigger: GAAGGTTGCATTTCTCCTCCACAAACAGTGGACTAT...CAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	CATGCTGTCCACATAGCAGCCATCCAGGAAAGATTAAACGCACTGATTGCTAAAAGAGCCCTCTTACCCTaGGCAGGTAAGCCTGGACAA	+
Preference number: 4 (lower is better) Translates to: HAVHIAAIQERLNALIAKRALLP*AGKPGQ Trigger: TTGTCCAGGCTTACCTGCCCAGGGTAAGAGGGCTCT...TTTAGCAATCAGTGCGTTTAATCTTTCCTGGATGGCTGCTATGTGGACAGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	TTGGACTCCGCTCCATTTGCAAGGAATAAGGGTAGACAGGTGAAGTCTTCTGAGCTGAATTCTGCCTCCTaGCCAATTCCAGTCGTTTCT	+
Preference number: 4 (lower is better) Translates to: LDSAPFARNKGRQVKSSELNSAS*PIPVVS Trigger: AGAAACGACTGGAATTGGTCAGGAGGCAGAATTCAG...CTCAGAAGACTTCACCTGTCTACCCTTATTCCTTGCAAATGGAGCGGAGTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	ACTACCACTATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAATGGACTGGGAAAATCTaGATTCTGCCTCCTGACCAA	+
Preference number: 4 (lower is better) Translates to: TTTMFYIHLGNSRGTLRQWTGKI*ILPPDQ Trigger: TTGGTCAGGAGGCAGAATTCAGATTTTCCCAGTCCA...TTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACATAGTGGTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	CTTCTGAGACAGTCTCCTGAAGACTCTCTCCAAACACACAACAGAACCAACCAGTGGACTGGGAAAATCTaGATTCTGCCTCCTGACCAA	+
Preference number: 4 (lower is better) Translates to: LLRQSPEDSLQTHNRTNQWTGKI*ILPPDQ Trigger: TTGGTCAGGAGGCAGAATTCAGATTTTCCCAGTCCA...CTGGTTGGTTCTGTTGTGTGTTTGGAGAGAGTCTTCAGGAGACTGTCTCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	ACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCACCCACTACCACTATGTTCACGTGATGACTaGGATTTTGAGAGAATCTGG	+
Preference number: 4 (lower is better) Translates to: TVICWIHKPMNAAHPLPLCSRDD*DFERIW Trigger: CCAGATTCTCTCAAAATCTCAGTCATCACGTGAACA...TAGTGGTAGTGGGTGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR GCA 90 bp	ACTACCACTATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGGATCGATATCTTCCTaGAACTGTGAACACTGGGGA	+
Preference number: 4 (lower is better) Translates to: TTTMFYIHLGNSRGTLRQGSISS*NCEHWG Trigger: TCCCCAGTGTTCACAGTTGCAGGAAGATATCGATCC...TTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACATAGTGGTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	CTTCTGAGACAGTCTCCTGAAGACTCTCTCCAAACACACAACAGAACCAACCAGGGATCGATATCTTCCTaGAACTGTGAACACTGGGGA	+
Preference number: 4 (lower is better) Translates to: LLRQSPEDSLQTHNRTNQGSISS*NCEHWG Trigger: TCCCCAGTGTTCACAGTTGCAGGAAGATATCGATCC...CTGGTTGGTTCTGTTGTGTGTTTGGAGAGAGTCTTCAGGAGACTGTCTCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	GCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCACCCACTACCACAGTTCTGTCATATATaGCAACACACCAATAAGGTA	+
Preference number: 4 (lower is better) Translates to: ATVICWIHKPMNAAHPLPQFCHI*QHTNKV Trigger: TACCTTATTGGTGTGTTGGCATATATGACAGAACTG...TGGTAGTGGGTGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR CCA 90 bp	ACTACCACTATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTTTCTGCAGAGGGGTaGCACCTACAAAGTAGTTCT	+
Preference number: 4 (lower is better) Translates to: TTTMFYIHLGNSRGTLRQVSAEG*HLQSSS Trigger: AGAACTACTTTGTAGGTGCCACCCCTCTGCAGAAAC...TTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACATAGTGGTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	TATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATCCTTCGAGATGGACTaGGAAAATCTGAATTCTGCC	+
Preference number: 4 (lower is better) Translates to: YVLYPSGQLQRHPETSAPSFEMD*ENLNSA Trigger: GGCAGAATTCAGATTTTCCCAGTCCATCTCGAAGGA...TGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	ATAACAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTGCAACTGTGAACACTaGGGAATTTTCCTTCGAGAT	+
Preference number: 4 (lower is better) Translates to: ITGHSHSDMLDTQAHERGCNCEH*GIFLRD Trigger: ATCTCGAAGGAAAATTCCCCAGTGTTCACAGTTGCA...GCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	AACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGGGATTTTGAGAGAATCTaGACAAGAAACGCTTCATGG	+
Preference number: 4 (lower is better) Translates to: NSRGTLRQVLHFFHCPTWDFERI*TRNASW Trigger: CCATGAAGCGTTTCTTGTCCAGATTCTCTCAAAATC...CCAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR TCA 90 bp	GTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTTGTTCACGTGATGACTaGGATTTTGAGAGAATCTGG	+
Preference number: 4 (lower is better) Translates to: VLYPSGQLQRHPETSAPFCSRDD*DFERIW Trigger: CCAGATTCTCTCAAAATCTCAGTCATCACGTGAACA...AAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR GCA 90 bp	ATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATGGAAAATCTGAATTCTaGCTCCTGACCAATTCCAGT	+
Preference number: 4 (lower is better) Translates to: MFYIHLGNSRGTLRQVLHGKSEF*LLTNSS Trigger: ACTGGAATTGGTCAGGAGGCAGAATTCAGATTTTCC...ATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	GAACTTGAACTTGTGGGTGCTGGAACCCCAAATCAGATCCCCTGCAAGAGCATTTTTGTGGAGGAGAAATaGAACCTTCTGAGGATCGAT	+
Preference number: 4 (lower is better) Translates to: ELELVGAGTPNQIPCKSIFVEEK*NLLRID Trigger: ATCGATCCTCAGAAGGTTGCATTTCTCCTCCACAAA...AATGCTCTTGCAGGGGATCTGATTTGGGGTTCCAGCACCCACAAGTTCAAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	ACCACTATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGTGCAACTGTGAACACTaGGGAATTTTCCTTCGAGAT	+
Preference number: 4 (lower is better) Translates to: TTMFYIHLGNSRGTLRQVCNCEH*GIFLRD Trigger: ATCTCGAAGGAAAATTCCCCAGTGTTCACAGTTGCA...CACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACATAGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	ATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTGCAACTGTGAACACTaGGGAATTTTCCTTCGAGAT	+
Preference number: 4 (lower is better) Translates to: MFYIHLGNSRGTLRQVLHCNCEH*GIFLRD Trigger: ATCTCGAAGGAAAATTCCCCAGTGTTCACAGTTGCA...ATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	AGCCATATAACGGTCCATTTTGCATGCTGTCCACATAGCAGCCATCCAGGAAAGACAAGAAACGCTTCATaGTCCCTTTGTGTCCCTTTC	+
Preference number: 4 (lower is better) Translates to: SHITVHFACCPHSSHPGKTRNAS*SLCVPF Trigger: GAAAGGGACACAAAGGGACCATGAAGCGTTTCTTGT...CTTTCCTGGATGGCTGCTATGTGGACAGCATGCAAAATGGACCGTTATATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	CATGCTGTCCACATAGCAGCCATCCAGGAAAGATTAAACGCACTGATTGCTAAACTGAATTCTGCCTCCTaGCCAATTCCAGTCGTTTCT	+
Preference number: 4 (lower is better) Translates to: HAVHIAAIQERLNALIAKLNSAS*PIPVVS Trigger: AGAAACGACTGGAATTGGTCAGGAGGCAGAATTCAG...TTTAGCAATCAGTGCGTTTAATCTTTCCTGGATGGCTGCTATGTGGACAGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	CTTGGAGCTAGAGTTACAGAGAGTAGTGAACTTGAACTTGTGGGTGCTGGAACCCTTGTGGCTGCTAAGTaGATTTTGAAATGCCTATGG	+
Preference number: 4 (lower is better) Translates to: LGARVTESSELELVGAGTLVAAK*ILKCLW Trigger: CCATAGGCATTTCAAAATTCACTTAGCAGCCACAAG...GGTTCCAGCACCCACAAGTTCAAGTTCACTACTCTCTGTAACTCTAGCTCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028035.14
CDS-3UTR GCA 90 bp	ACAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCAACAGCTACTCCTTTTTaGTTTTCGGCAACAATAAAT	+
Preference number: 4 (lower is better) Translates to: TGHSHSDMLDTQAHERGSTATPF*FSATIN Trigger: ATTTATTGTTGCCGAAAAGCAAAAAGGAGTAGCTGT...TGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	ACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCACCCACTACCACTACAGTTCTGTCATATATaGCAACACACCAATAAGGTA	+
Preference number: 4 (lower is better) Translates to: TVICWIHKPMNAAHPLPLQFCHI*QHTNKV Trigger: TACCTTATTGGTGTGTTGGCATATATGACAGAACTG...TAGTGGTAGTGGGTGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR CCA 90 bp	GTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTGATTTTGAGAGAATCTaGACAAGAAACGCTTCATGG	+
Preference number: 4 (lower is better) Translates to: VLYPSGQLQRHPETSAPFDFERI*TRNASW Trigger: CCATGAAGCGTTTCTTGTCCAGATTCTCTCAAAATC...AAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR CCA 90 bp	TATGACACAGAATCTTTATTTTCCCATCAGTGTGTGCTGAAGCTACAGATGTTGAGAGCCCTCTTACCCTaGGCAGGTAAGCCTGGACAA	+
Preference number: 4 (lower is better) Translates to: YDTESLFSHQCVLKLQMLRALLP*AGKPGQ Trigger: TTGTCCAGGCTTACCTGCCCAGGGTAAGAGGGCTCT...CAACATCTGTAGCTTCAGCACACACTGATGGGAAAATAAAGATTCTGTGTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192850.6
3UTR CAA 72 bp	GATTACTTGGAGCTAGAGTTACAGAGAGTAGTGAACTaGAACTTGTGGGTGCTGGAACCCCAAATCAGATCC	+
Preference number: 4 (lower is better) Translates to: DYLELELQRVVN*NLWVLEPQIRS Trigger: GGATCTGATTTGGGGTTCCAGCACCCACAAGTTCAAGTTCACTACTCTCTGTAACTCTAGCTCCAAGTAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	ATTTTGCATGCTGTCCACATAGCAGCCATCCAGGAAAGATTAAACGCACTGATTTGGACTGGGAAAATCTaGATTCTGCCTCCTGACCAA	+
Preference number: 4 (lower is better) Translates to: ILHAVHIAAIQERLNALIWTGKI*ILPPDQ Trigger: TTGGTCAGGAGGCAGAATTCAGATTTTCCCAGTCCA...AATCAGTGCGTTTAATCTTTCCTGGATGGCTGCTATGTGGACAGCATGCAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	AAGTATGTACAAATAGGACAGAAAAAGCATGACTCAGTGGCCGAGTACTTGCCTACAGGTGAAGTCTTCTaGGACAGTCTCCTGAAGACT	+
Preference number: 4 (lower is better) Translates to: KYVQIGQKKHDSVAEYLPTGEVF*DSLLKT Trigger: AGTCTTCAGGAGACTGTCTCAGAAGACTTCACCTGT...AGGCAAGTACTCGGCCACTGAGTCATGCTTTTTCTGTCCTATTTGTACATACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028035.14
CDS-3UTR GCA 90 bp	ACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCACCCACTACCACTAACAGCTACTCCTTTTTaGTTTTCGGCAACAATAAAT	+
Preference number: 4 (lower is better) Translates to: TVICWIHKPMNAAHPLPLTATPF*FSATIN Trigger: ATTTATTGTTGCCGAAAAGCAAAAAGGAGTAGCTGT...TAGTGGTAGTGGGTGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	GCATCTTTTATAACAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATTCCTTCGAGATGGACTaGGAAAATCTGAATTCTGCC	+
Preference number: 4 (lower is better) Translates to: ASFITGHSHSDMLDTQAHSFEMD*ENLNSA Trigger: GGCAGAATTCAGATTTTCCCAGTCCATCTCGAAGGA...ATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTGTTATAAAAGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	AAAGATGTATTGGACTCCGCTCCATTTGCAAGGAATAAGGGTAGACAGGTGAAGTCCTTCGAGATGGACTaGGAAAATCTGAATTCTGCC	+
Preference number: 4 (lower is better) Translates to: KDVLDSAPFARNKGRQVKSFEMD*ENLNSA Trigger: GGCAGAATTCAGATTTTCCCAGTCCATCTCGAAGGA...CTTCACCTGTCTACCCTTATTCCTTGCAAATGGAGCGGAGTCCAATACATCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	AAATCTAGAGGTGAAAAATCAAGGAAGTCAGGAAGGAACCTCAGAGGCAAGCCCTGCAACTGTGAACACTaGGGAATTTTCCTTCGAGAT	+
Preference number: 4 (lower is better) Translates to: KSRGEKSRKSGRNLRGKPCNCEH*GIFLRD Trigger: ATCTCGAAGGAAAATTCCCCAGTGTTCACAGTTGCA...GGGCTTGCCTCTGAGGTTCCTTCCTGACTTCCTTGATTTTTCACCTCTAGATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000143486.7
CDS-3UTR CCA 90 bp	ATATCTAAGCTCTGTGGGCTACAGGGCACAGACCAAAGAAATTCAGTAGTAGCCTGCAACTGTGAACACTaGGGAATTTTCCTTCGAGAT	+
Preference number: 4 (lower is better) Translates to: ISKLCGLQGTDQRNSVVACNCEH*GIFLRD Trigger: ATCTCGAAGGAAAATTCCCCAGTGTTCACAGTTGCA...GGCTACTACTGAATTTCTTTGGTCTGTGCCCTGTAGCCCACAGAGCTTAGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	ATATCTAAGCTCTGTGGGCTACAGGGCACAGACCAAAGAAATTCAGTAGTAGCCATAGTCCACTGTTTGTaGAGGAGAAATGCAACCTTC	+
Preference number: 4 (lower is better) Translates to: ISKLCGLQGTDQRNSVVAIVHCL*RRNATF Trigger: GAAGGTTGCATTTCTCCTCCACAAACAGTGGACTAT...GGCTACTACTGAATTTCTTTGGTCTGTGCCCTGTAGCCCACAGAGCTTAGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	AAAGATGTATTGGACTCCGCTCCATTTGCAAGGAATAAGGGTAGACAGGTGAAGGGAAAATCTGAATTCTaGCTCCTGACCAATTCCAGT	+
Preference number: 4 (lower is better) Translates to: KDVLDSAPFARNKGRQVKGKSEF*LLTNSS Trigger: ACTGGAATTGGTCAGGAGGCAGAATTCAGATTTTCC...CTTCACCTGTCTACCCTTATTCCTTGCAAATGGAGCGGAGTCCAATACATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	CATGCTGTCCACATAGCAGCCATCCAGGAAAGATTAAACGCACTGATTGCTAAAGGAAAATCTGAATTCTaGCTCCTGACCAATTCCAGT	+
Preference number: 4 (lower is better) Translates to: HAVHIAAIQERLNALIAKGKSEF*LLTNSS Trigger: ACTGGAATTGGTCAGGAGGCAGAATTCAGATTTTCC...TTTAGCAATCAGTGCGTTTAATCTTTCCTGGATGGCTGCTATGTGGACAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	CAGTCCACAACACTTTATCTTCTCTGTGTTCACGTGATGACTGAGATTTTGAGAGGATCGATATCTTCCTaGAACTGTGAACACTGGGGA	+
Preference number: 4 (lower is better) Translates to: QSTTLYLLCVHVMTEILRGSISS*NCEHWG Trigger: TCCCCAGTGTTCACAGTTGCAGGAAGATATCGATCC...TCTCAAAATCTCAGTCATCACGTGAACACAGAGAAGATAAAGTGTTGTGGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	AAAGATGTATTGGACTCCGCTCCATTTGCAAGGAATAAGGGTAGACAGGTGAAGTTTGTGGAGGAGAAATaGAACCTTCTGAGGATCGAT	+
Preference number: 4 (lower is better) Translates to: KDVLDSAPFARNKGRQVKFVEEK*NLLRID Trigger: ATCGATCCTCAGAAGGTTGCATTTCTCCTCCACAAA...CTTCACCTGTCTACCCTTATTCCTTGCAAATGGAGCGGAGTCCAATACATCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	AGTAGAGTGGAGAAAATCACTTTGATGTTGAAGTCTTCTCCCACTTCCACAGCTTCCTTCGAGATGGACTaGGAAAATCTGAATTCTGCC	+
Preference number: 4 (lower is better) Translates to: SRVEKITLMLKSSPTSTASFEMD*ENLNSA Trigger: GGCAGAATTCAGATTTTCCCAGTCCATCTCGAAGGA...AGCTGTGGAAGTGGGAGAAGACTTCAACATCAAAGTGATTTTCTCCACTCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6
CDS-3UTR CCA 90 bp	CTGAAGCTACAGATGTTGAGACACGAACCAATCTTGTGGCTGCTAAGTGAATTTTCCTTCGAGATGGACTaGGAAAATCTGAATTCTGCC	+
Preference number: 4 (lower is better) Translates to: LKLQMLRHEPILWLLSEFSFEMD*ENLNSA Trigger: GGCAGAATTCAGATTTTCCCAGTCCATCTCGAAGGA...AAATTCACTTAGCAGCCACAAGATTGGTTCGTGTCTCAACATCTGTAGCTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	AAAGATGTATTGGACTCCGCTCCATTTGCAAGGAATAAGGGTAGACAGGTGAAGTGCAACTGTGAACACTaGGGAATTTTCCTTCGAGAT	+
Preference number: 4 (lower is better) Translates to: KDVLDSAPFARNKGRQVKCNCEH*GIFLRD Trigger: ATCTCGAAGGAAAATTCCCCAGTGTTCACAGTTGCA...CTTCACCTGTCTACCCTTATTCCTTGCAAATGGAGCGGAGTCCAATACATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
3UTR CAA 72 bp	CTTTATCTTCTCTGTGTTCACGTGATGACTGAGATTTaGAGAGAATCTGGACAAGAAACGCTTCATGGTCCC	+
Preference number: 4 (lower is better) Translates to: LYLLCVHVMTEI*RESGQETLHGP Trigger: GGGACCATGAAGCGTTTCTTGTCCAGATTCTCTCAAAATCTCAGTCATCACGTGAACACAGAGAAGATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143486.7
3UTR CAA 72 bp	TTATTTTCCCATCAGTGTGTGCTGAAGCTACAGATGTaGAGACACGAACCAATCTTGTGGCTGCTAAGTGAA	+
Preference number: 4 (lower is better) Translates to: LFSHQCVLKLQM*RHEPILWLLSE Trigger: TTCACTTAGCAGCCACAAGATTGGTTCGTGTCTCAACATCTGTAGCTTCAGCACACACTGATGGGAAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR TCA 90 bp	ATTTTGCATGCTGTCCACATAGCAGCCATCCAGGAAAGATTAAACGCACTGATTAATAGTCTGCAACTGTaGACACTGGGGAATTTTCCT	+
Preference number: 4 (lower is better) Translates to: ILHAVHIAAIQERLNALINSLQL*TLGNFP Trigger: AGGAAAATTCCCCAGTGTTCACAGTTGCAGACTATT...AATCAGTGCGTTTAATCTTTCCTGGATGGCTGCTATGTGGACAGCATGCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6
CDS-3UTR GCA 90 bp	CATAAGAAATATCTAAGCTCTGTGGGCTACAGGGCACAGACCAAAGAAATTCAGTTTGTGGAGGAGAAATaGAACCTTCTGAGGATCGAT	+
Preference number: 4 (lower is better) Translates to: HKKYLSSVGYRAQTKEIQFVEEK*NLLRID Trigger: ATCGATCCTCAGAAGGTTGCATTTCTCCTCCACAAA...CTGAATTTCTTTGGTCTGTGCCCTGTAGCCCACAGAGCTTAGATATTTCTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	CATAAGAAATATCTAAGCTCTGTGGGCTACAGGGCACAGACCAAAGAAATTCAGAAGTCTAGAATAGTCTaGAACTGTGAACACTGGGGA	+
Preference number: 4 (lower is better) Translates to: HKKYLSSVGYRAQTKEIQKSRIV*NCEHWG Trigger: TCCCCAGTGTTCACAGTTGCAGACTATTCTAGACTT...CTGAATTTCTTTGGTCTGTGCCCTGTAGCCCACAGAGCTTAGATATTTCTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000143486.7 ENSMUST00000192150.6
CDS-3UTR CCA 90 bp	CTGAAGCTACAGATGTTGAGACACGAACCAATCTTGTGGCTGCTAAGTGAATTTATAGTCCACTGTTTGTaGAGGAGAAATGCAACCTTC	+
Preference number: 4 (lower is better) Translates to: LKLQMLRHEPILWLLSEFIVHCL*RRNATF Trigger: GAAGGTTGCATTTCTCCTCCACAAACAGTGGACTAT...AAATTCACTTAGCAGCCACAAGATTGGTTCGTGTCTCAACATCTGTAGCTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	CAGTCCACAACACTTTATCTTCTCTGTGTTCACGTGATGACTGAGATTTTGAGAACAAGAAACGCTTCATaGTCCCTTTGTGTCCCTTTC	+
Preference number: 4 (lower is better) Translates to: QSTTLYLLCVHVMTEILRTRNAS*SLCVPF Trigger: GAAAGGGACACAAAGGGACCATGAAGCGTTTCTTGT...TCTCAAAATCTCAGTCATCACGTGAACACAGAGAAGATAAAGTGTTGTGGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	ACTGTCCCACTTGGCATCGCAGTTCAGCAAATGATCAAAACAGTTTATAATGCATTTGTGGAGGAGAAATaGAACCTTCTGAGGATCGAT	+
Preference number: 4 (lower is better) Translates to: TVPLGIAVQQMIKTVYNAFVEEK*NLLRID Trigger: ATCGATCCTCAGAAGGTTGCATTTCTCCTCCACAAA...TGCATTATAAACTGTTTTGATCATTTGCTGAACTGCGATGCCAAGTGGGACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	ATTAACAATTCAGCATCTTTTATAACAGGACACAGCCACAGTGATATGCTGGATACGGTCCATTTTGCATaGTGTCCACATAGCAGCCAT	+
Preference number: 4 (lower is better) Translates to: INNSASFITGHSHSDMLDTVHFA*CPHSSH Trigger: ATGGCTGCTATGTGGACAGCATGCAAAATGGACCGT...ATCCAGCATATCACTGTGGCTGTGTCCTGTTATAAAAGATGCTGAATTGTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR CCA 90 bp	ATTAACAATTCAGCATCTTTTATAACAGGACACAGCCACAGTGATATGCTGGATGTTTCTGCAGAGGGGTaGCACCTACAAAGTAGTTCT	+
Preference number: 4 (lower is better) Translates to: INNSASFITGHSHSDMLDVSAEG*HLQSSS Trigger: AGAACTACTTTGTAGGTGCCACCCCTCTGCAGAAAC...ATCCAGCATATCACTGTGGCTGTGTCCTGTTATAAAAGATGCTGAATTGTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CCA 90 bp	GAAAGATTAAACGCACTGATTGCTAAAGGACTGAAGCAACAGTCAAAGGTTTTCATAGTCCACTGTTTGTaGAGGAGAAATGCAACCTTC	+
Preference number: 4 (lower is better) Translates to: ERLNALIAKGLKQQSKVFIVHCL*RRNATF Trigger: GAAGGTTGCATTTCTCCTCCACAAACAGTGGACTAT...GAAAACCTTTGACTGTTGCTTCAGTCCTTTAGCAATCAGTGCGTTTAATCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	TGCCATCATAAAAATATACTCAGTAACAGCCAGGACACAATGTCTCCACTAGAGACAGCTACTCCTTTTTaGTTTTCGGCAACAATAAAT	+
Preference number: 4 (lower is better) Translates to: CHHKNILSNSQDTMSPLETATPF*FSATIN Trigger: ATTTATTGTTGCCGAAAAGCAAAAAGGAGTAGCTGT...CTCTAGTGGAGACATTGTGTCCTGGCTGTTACTGAGTATATTTTTATGATGGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028035.14
CDS-3UTR GCA 90 bp	ACTGTCCCACTTGGCATCGCAGTTCAGCAAATGATCAAAACAGTTTATAATGCAACAGCTACTCCTTTTTaGTTTTCGGCAACAATAAAT	+
Preference number: 4 (lower is better) Translates to: TVPLGIAVQQMIKTVYNATATPF*FSATIN Trigger: ATTTATTGTTGCCGAAAAGCAAAAAGGAGTAGCTGT...TGCATTATAAACTGTTTTGATCATTTGCTGAACTGCGATGCCAAGTGGGACAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR GCA 90 bp	CAGTCCACAACACTTTATCTTCTCTGTGTTCACGTGATGACTGAGATTTTGAGAACAGCTACTCCTTTTTaGTTTTCGGCAACAATAAAT	+
Preference number: 4 (lower is better) Translates to: QSTTLYLLCVHVMTEILRTATPF*FSATIN Trigger: ATTTATTGTTGCCGAAAAGCAAAAAGGAGTAGCTGT...TCTCAAAATCTCAGTCATCACGTGAACACAGAGAAGATAAAGTGTTGTGGACTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
3UTR CAA 72 bp	GGGAGAGATAGAGATGGAAATACTAATTACTGTAATTaGGCCTTTCTTGAGTCATACTATGCCCATAAGTAT	+
Preference number: 4 (lower is better) Translates to: GRDRDGNTNYCN*AFLESYYAHKY Trigger: ATACTTATGGGCATAGTATGACTCAAGAAAGGCCAAATTACAGTAATTAGTATTTCCATCTCTATCTCTCCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	AACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGGCGCTTCATGGTCCCTTaGTGTCCCTTTCACTCCAAG	+
Preference number: 5 (lower is better) Translates to: NSRGTLRQVLHFFHCPTWRFMVP*CPFHSK Trigger: CTTGGAGTGAAAGGGACACAAAGGGACCATGAAGCG...CCAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	CAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGCGCTTCATGGTCCCTTaGTGTCCCTTTCACTCCAAG	+
Preference number: 5 (lower is better) Translates to: QLQRHPETSAPFLPLSHLRFMVP*CPFHSK Trigger: CTTGGAGTGAAAGGGACACAAAGGGACCATGAAGCG...CAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	CAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGACCTCCCCAGGGGTTTaGTGGACACTTTCCCATAAA	+
Preference number: 5 (lower is better) Translates to: QLQRHPETSAPFLPLSHLTSPGV*WTLSHK Trigger: TTTATGGGAAAGTGTCCACAAAACCCCTGGGGAGGT...CAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR CAA 90 bp	CCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTATATAGTCCACTGTTaGTGGAGGAGAAATGCAACC	+
Preference number: 5 (lower is better) Translates to: PSGQLQRHPETSAPFLPLYIVHC*WRRNAT Trigger: GGTTGCATTTCTCCTCCACAAACAGTGGACTATATA...CAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	GGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACAAAATCACTTTGATGTaGAAGTCTTCTCCCACTTCC	+
Preference number: 5 (lower is better) Translates to: GQLQRHPETSAPFLPLSHKITLM*KSSPTS Trigger: GGAAGTGGGAGAAGACTTCAACATCAAAGTGATTTT...GTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	TATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATGGACTCCGCTCCATTaGCAAGGAATAAGGGTAGAC	+
Preference number: 5 (lower is better) Translates to: YVLYPSGQLQRHPETSAPWTPLH*QGIRVD Trigger: GTCTACCCTTATTCCTTGCAAATGGAGCGGAGTCCA...TGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR CAA 90 bp	GTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTACCTCCCCAGGGGTTTaGTGGACACTTTCCCATAAA	+
Preference number: 5 (lower is better) Translates to: VLYPSGQLQRHPETSAPFTSPGV*WTLSHK Trigger: TTTATGGGAAAGTGTCCACAAAACCCCTGGGGAGGT...AAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR CAA 90 bp	TCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGGCATTATATAGTCCACTGTTaGTGGAGGAGAAATGCAACC	+
Preference number: 5 (lower is better) Translates to: SRGTLRQVLHFFHCPTWHYIVHC*WRRNAT Trigger: GGTTGCATTTCTCCTCCACAAACAGTGGACTATATA...ATGCCAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	ACAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCATATATAGTCCACTGTTaGTGGAGGAGAAATGCAACC	+
Preference number: 5 (lower is better) Translates to: TGHSHSDMLDTQAHERGSYIVHC*WRRNAT Trigger: GGTTGCATTTCTCCTCCACAAACAGTGGACTATATA...TGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	CAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGGCATCGAAAATCACTTTGATGTaGAAGTCTTCTCCCACTTCC	+
Preference number: 5 (lower is better) Translates to: QRHPETSAPFLPLSHLASKITLM*KSSPTS Trigger: GGAAGTGGGAGAAGACTTCAACATCAAAGTGATTTT...CGATGCCAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	GTCCACATAGCAGCCATCCAGGAAAGATTAAACGCACTGATTGCTAAAGGACTGCGCTTCATGGTCCCTTaGTGTCCCTTTCACTCCAAG	+
Preference number: 5 (lower is better) Translates to: VHIAAIQERLNALIAKGLRFMVP*CPFHSK Trigger: CTTGGAGTGAAAGGGACACAAAGGGACCATGAAGCG...CAGTCCTTTAGCAATCAGTGCGTTTAATCTTTCCTGGATGGCTGCTATGTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	ACTACCACTATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAATGGACTCCGCTCCATTaGCAAGGAATAAGGGTAGAC	+
Preference number: 5 (lower is better) Translates to: TTTMFYIHLGNSRGTLRQWTPLH*QGIRVD Trigger: GTCTACCCTTATTCCTTGCAAATGGAGCGGAGTCCA...TTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACATAGTGGTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR CAA 90 bp	ATAACAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCCTGAAGCTACAGATGTaGAGACACGAACCAATCTTG	+
Preference number: 5 (lower is better) Translates to: ITGHSHSDMLDTQAHERGLKLQM*RHEPIL Trigger: CAAGATTGGTTCGTGTCTCAACATCTGTAGCTTCAG...GCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR CAA 90 bp	ACAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCAAAAATCACTTTGATGTaGAAGTCTTCTCCCACTTCC	+
Preference number: 5 (lower is better) Translates to: TGHSHSDMLDTQAHERGSKITLM*KSSPTS Trigger: GGAAGTGGGAGAAGACTTCAACATCAAAGTGATTTT...TGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	ACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCACCCACTACCACTAGTGGAGAAAATCACTTaGATGTTGAAGTCTTCTCCC	+
Preference number: 5 (lower is better) Translates to: TVICWIHKPMNAAHPLPLVEKIT*MLKSSP Trigger: GGGAGAAGACTTCAACATCAAAGTGATTTTCTCCAC...TAGTGGTAGTGGGTGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	GCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCACCCACTACCATTTCCCATAAAGCTTTaGCATCTTCTGGATGTATTG	+
Preference number: 5 (lower is better) Translates to: ATVICWIHKPMNAAHPLPFPIKL*HLLDVL Trigger: CAATACATCCAGAAGATGCAAAAGCTTTATGGGAAA...TGGTAGTGGGTGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR CAA 90 bp	TATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCACTGAAGCTACAGATGTaGAGACACGAACCAATCTTG	+
Preference number: 5 (lower is better) Translates to: YVLYPSGQLQRHPETSAPLKLQM*RHEPIL Trigger: CAAGATTGGTTCGTGTCTCAACATCTGTAGCTTCAG...TGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR CAA 90 bp	ACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCTCACCCACTACCACTAAAAATCACTTTGATGTaGAAGTCTTCTCCCACTTCC	+
Preference number: 5 (lower is better) Translates to: TVICWIHKPMNAAHPLPLKITLM*KSSPTS Trigger: GGAAGTGGGAGAAGACTTCAACATCAAAGTGATTTT...TAGTGGTAGTGGGTGAGCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	GTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTGTGGAGAAAATCACTTaGATGTTGAAGTCTTCTCCC	+
Preference number: 5 (lower is better) Translates to: VLYPSGQLQRHPETSAPFVEKIT*MLKSSP Trigger: GGGAGAAGACTTCAACATCAAAGTGATTTTCTCCAC...AAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	AAGTATGTACAAATAGGACAGAAAAAGCATGACTCAGTGGCCGAGTACTTGCCTCGCTTCATGGTCCCTTaGTGTCCCTTTCACTCCAAG	+
Preference number: 5 (lower is better) Translates to: KYVQIGQKKHDSVAEYLPRFMVP*CPFHSK Trigger: CTTGGAGTGAAAGGGACACAAAGGGACCATGAAGCG...AGGCAAGTACTCGGCCACTGAGTCATGCTTTTTCTGTCCTATTTGTACATACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028035.14 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	AAATTCAGTAGTAGCCATATAACGGTCCATTTTGCATGCTGTCCACATAGCAGCCGCTTCATGGTCCCTTaGTGTCCCTTTCACTCCAAG	+
Preference number: 5 (lower is better) Translates to: KFSSSHITVHFACCPHSSRFMVP*CPFHSK Trigger: CTTGGAGTGAAAGGGACACAAAGGGACCATGAAGCG...GCTGCTATGTGGACAGCATGCAAAATGGACCGTTATATGGCTACTACTGAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	ATAACAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGAACGCGGCGTGATGACTGAGATTTaGAGAGAATCTGGACAAGAA	+
Preference number: 5 (lower is better) Translates to: ITGHSHSDMLDTQAHERGVMTEI*RESGQE Trigger: TTCTTGTCCAGATTCTCTCAAAATCTCAGTCATCAC...GCCGCGTTCATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR CAA 90 bp	TCCAGAGGCACCCTGAGACAAGTGCTCCATTTCTTCCACTGTCCCACTTGGCATTTTCCCATAAAGCTTTaGCATCTTCTGGATGTATTG	+
Preference number: 5 (lower is better) Translates to: SRGTLRQVLHFFHCPTWHFPIKL*HLLDVL Trigger: CAATACATCCAGAAGATGCAAAAGCTTTATGGGAAA...ATGCCAAGTGGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS TCA 90 bp	TCGTTTCTGCAGAGGGGTGGCACCTACAAAGTAGTTCTTAAGATTTaGGGTCCTTCGTCTAGAAGTCAGTCCTCGAAAATCACAGGAATC	+
Preference number: 5 (lower is better) Translates to: SFLQRGGTYKVVLKI*GPSSRSQSSKITGI Trigger: GATTCCTGTGATTTTCGAGGACTGACTTCTAGACGAAGGACCTCAAATCTTAAGAACTACTTTGTAGGTGCCACCCCTCTGCAGAAACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000143486.7 ENSMUST00000192150.6 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	GTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAAGTGCTCCATTTAAAATCACTTTGATGTaGAAGTCTTCTCCCACTTCC	+
Preference number: 5 (lower is better) Translates to: VLYPSGQLQRHPETSAPFKITLM*KSSPTS Trigger: GGAAGTGGGAGAAGACTTCAACATCAAAGTGATTTT...AAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	CACTACCACTATGTTCTATATCCATCTGGGCAACTCCAGAGGCACCCTGAGACAGTGATGACTGAGATTTaGAGAGAATCTGGACAAGAA	+
Preference number: 5 (lower is better) Translates to: HYHYVLYPSGQLQRHPETVMTEI*RESGQE Trigger: TTCTTGTCCAGATTCTCTCAAAATCTCAGTCATCAC...TGTCTCAGGGTGCCTCTGGAGTTGCCCAGATGGATATAGAACATAGTGGTAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR CAA 90 bp	GTCCACATAGCAGCCATCCAGGAAAGATTAAACGCACTGATTGCTAAAGGACTGGTGGAGAAAATCACTTaGATGTTGAAGTCTTCTCCC	+
Preference number: 5 (lower is better) Translates to: VHIAAIQERLNALIAKGLVEKIT*MLKSSP Trigger: GGGAGAAGACTTCAACATCAAAGTGATTTTCTCCAC...CAGTCCTTTAGCAATCAGTGCGTTTAATCTTTCCTGGATGGCTGCTATGTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	TACACTCTTCCCAAACCCAGATGCCATCATAAAAATATACTCAGTAACAGCCAGACCTCCCCAGGGGTTTaGTGGACACTTTCCCATAAA	+
Preference number: 5 (lower is better) Translates to: YTLPKPRCHHKNILSNSQTSPGV*WTLSHK Trigger: TTTATGGGAAAGTGTCCACAAAACCCCTGGGGAGGT...CTGGCTGTTACTGAGTATATTTTTATGATGGCATCTGGGTTTGGGAAGAGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028035.14
CDS-3UTR CAA 90 bp	CTCTCTCCAAACACACAACAGAACCAACCAGTCCACAACACTTTATCTTCTCTGTATATAGTCCACTGTTaGTGGAGGAGAAATGCAACC	+
Preference number: 5 (lower is better) Translates to: LSPNTQQNQPVHNTLSSLYIVHC*WRRNAT Trigger: GGTTGCATTTCTCCTCCACAAACAGTGGACTATATA...CAGAGAAGATAAAGTGTTGTGGACTGGTTGGTTCTGTTGTGTGTTTGGAGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	GCATCTTTTATAACAGGACACAGCCACAGTGATATGCTGGATACACAAGCCCATGTGGAGAAAATCACTTaGATGTTGAAGTCTTCTCCC	+
Preference number: 5 (lower is better) Translates to: ASFITGHSHSDMLDTQAHVEKIT*MLKSSP Trigger: GGGAGAAGACTTCAACATCAAAGTGATTTTCTCCAC...ATGGGCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTGTTATAAAAGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	ATTAACAATTCAGCATCTTTTATAACAGGACACAGCCACAGTGATATGCTGGATCGCTTCATGGTCCCTTaGTGTCCCTTTCACTCCAAG	+
Preference number: 5 (lower is better) Translates to: INNSASFITGHSHSDMLDRFMVP*CPFHSK Trigger: CTTGGAGTGAAAGGGACACAAAGGGACCATGAAGCG...ATCCAGCATATCACTGTGGCTGTGTCCTGTTATAAAAGATGCTGAATTGTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	GATAACTTTCAGGAGTTAGTTCTCTTCTTCCACCATGTGGGATCCAGGGATCCAGTGATGACTGAGATTTaGAGAGAATCTGGACAAGAA	+
Preference number: 5 (lower is better) Translates to: DNFQELVLFFHHVGSRDPVMTEI*RESGQE Trigger: TTCTTGTCCAGATTCTCTCAAAATCTCAGTCATCAC...TGGATCCCTGGATCCCACATGGTGGAAGAAGAGAACTAACTCCTGAAAGTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028035.14
CDS-3UTR CAA 90 bp	GACACAGAATCTTTATTTTCCCATCAGTGTGTGCTGAAGCTACAGATGTTGAGATATATAGTCCACTGTTaGTGGAGGAGAAATGCAACC	+
Preference number: 5 (lower is better) Translates to: DTESLFSHQCVLKLQMLRYIVHC*WRRNAT Trigger: GGTTGCATTTCTCCTCCACAAACAGTGGACTATATA...TCTCAACATCTGTAGCTTCAGCACACACTGATGGGAAAATAAAGATTCTGTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192850.6
CDS-3UTR CAA 90 bp	CATAAGAAATATCTAAGCTCTGTGGGCTACAGGGCACAGACCAAAGAAATTCAGAAAATCACTTTGATGTaGAAGTCTTCTCCCACTTCC	+
Preference number: 5 (lower is better) Translates to: HKKYLSSVGYRAQTKEIQKITLM*KSSPTS Trigger: GGAAGTGGGAGAAGACTTCAACATCAAAGTGATTTT...CTGAATTTCTTTGGTCTGTGCCCTGTAGCCCACAGAGCTTAGATATTTCTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	TACACTCTTCCCAAACCCAGATGCCATCATAAAAATATACTCAGTAACAGCCAGGTGGAGAAAATCACTTaGATGTTGAAGTCTTCTCCC	+
Preference number: 5 (lower is better) Translates to: YTLPKPRCHHKNILSNSQVEKIT*MLKSSP Trigger: GGGAGAAGACTTCAACATCAAAGTGATTTTCTCCAC...CTGGCTGTTACTGAGTATATTTTTATGATGGCATCTGGGTTTGGGAAGAGTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028035.14
CDS-3UTR CAA 90 bp	AACAATTCAGCATCTTTTATAACAGGACACAGCCACAGTGATATGCTGGATACACTGAAGCTACAGATGTaGAGACACGAACCAATCTTG	+
Preference number: 5 (lower is better) Translates to: NNSASFITGHSHSDMLDTLKLQM*RHEPIL Trigger: CAAGATTGGTTCGTGTCTCAACATCTGTAGCTTCAG...TGTATCCAGCATATCACTGTGGCTGTGTCCTGTTATAAAAGATGCTGAATTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS-3UTR CAA 90 bp	TCCACAACACTTTATCTTCTCTGTGTTCACGTGATGACTGAGATTTTGAGAGAAGTGGAGAAAATCACTTaGATGTTGAAGTCTTCTCCC	+
Preference number: 5 (lower is better) Translates to: STTLYLLCVHVMTEILREVEKIT*MLKSSP Trigger: GGGAGAAGACTTCAACATCAAAGTGATTTTCTCCAC...TTCTCTCAAAATCTCAGTCATCACGTGAACACAGAGAAGATAAAGTGTTGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS-3UTR CAA 90 bp	ATTAACAATTCAGCATCTTTTATAACAGGACACAGCCACAGTGATATGCTGGATTTTCCCATAAAGCTTTaGCATCTTCTGGATGTATTG	+
Preference number: 5 (lower is better) Translates to: INNSASFITGHSHSDMLDFPIKL*HLLDVL Trigger: CAATACATCCAGAAGATGCAAAAGCTTTATGGGAAA...ATCCAGCATATCACTGTGGCTGTGTCCTGTTATAAAAGATGCTGAATTGTTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10
CDS TCA 72 bp	TGCAACCTTCTGAGGATCGATATCTTCCTGCAACTGTaGACACTGGGGAATTTTCCTTCGAGATGGACTGGG	+
Preference number: 6 (lower is better) Translates to: CNLLRIDIFLQL*TLGNFPSRWTG Trigger: CCCAGTCCATCTCGAAGGAAAATTCCCCAGTGTTCACAGTTGCAGGAAGATATCGATCCTCAGAAGGTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2
CDS TCA 72 bp	ATAGTCCACTGTTTGTGGAGGAGAAATGCAACCTTCTaGGGATCGATATCTTCCTGCAACTGTGAACACTGG	+
Preference number: 6 (lower is better) Translates to: IVHCLWRRNATF*GSISSCNCEHW Trigger: CCAGTGTTCACAGTTGCAGGAAGATATCGATCCTCAGAAGGTTGCATTTCTCCTCCACAAACAGTGGACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028035.14 ENSMUST00000111618.8 ENSMUST00000111620.10 ENSMUST00000192850.6 ENSMUST00000194855.6 ENSMUST00000195571.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu