Pregenerated sensors for CENPC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029253Ensembl transcript IDs: ENSMUST00000031170.10
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | CCCTTCCTGAGCTCTTCAGCTGCTTTAGGCTTAGACACTCTCCTCTaGCTCTGTTTCGTAGTCCTTTCCCATGCGGGTGGGGTTTTGGCA | + |
Preference number: 5 (lower is better) Translates to: PFLSSSAALGLDTLL*LCFVVLSHAGGVLA Trigger: TGCCAAAACCCCACCCGCATGGGAAAGGACTACGAAACAGAGCCAGAGGAGAGTGTCTAAGCCTAAAGCAGCTGAAGAGCTCAGGAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CCA 90 bp | GCCTGCCTATCTACTGGACTCCTTGAGACAGAAGCCACTCTCTTTTaGCCGGCAGGTGAAGCGGCTTTCTGTAACGTGTTGACGTTTGCA | + |
Preference number: 5 (lower is better) Translates to: ACLSTGLLETEATLF*PAGEAAFCNVLTFA Trigger: TGCAAACGTCAACACGTTACAGAAAGCCGCTTCACCTGCCGGCCAAAAGAGAGTGGCTTCTGTCTCAAGGAGTCCAGTAGATAGGCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS GCA 90 bp | TTCATGTCACTTGGAGGAGGCGGAGAAAATGGAACTGCTGCTGTGTaGCTGACCACAGAACTGGATTTACTTTTCCTCTTGACAGTCTCT | + |
Preference number: 5 (lower is better) Translates to: FMSLGGGGENGTAAV*LTTELDLLFLLTVS Trigger: AGAGACTGTCAAGAGGAAAAGTAAATCCAGTTCTGTGGTCAGGCACACAGCAGCAGTTCCATTTTCTCCGCCTCCTCCAAGTGACATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CCA 90 bp | AGTAGTTGCCGGGTTTTCTTCAACAGAGAGCTGAGCTTCCTCTATTaGGTGAGCCTTATCAGACTGTGTGTTTCTTGCAAACGTCATTGC | + |
Preference number: 5 (lower is better) Translates to: SSCRVFFNRELSFLY*VSLIRLCVSCKRHC Trigger: GCAATGACGTTTGCAAGAAACACACAGTCTGATAAGGCTCACCCAATAGAGGAAGCTCAGCTCTCTGTTGAAGAAAACCCGGCAACTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CCA 90 bp | CTTGCAGAGAAGCTTCTCCTGTCCTTGAAGACACTGGAACTGGTTTaGAATGTGACTCTGGGCACTTTTTGCTTGATGATTGACTATAAT | + |
Preference number: 5 (lower is better) Translates to: LAEKLLLSLKTLELV*NVTLGTFCLMIDYN Trigger: ATTATAGTCAATCATCAAGCAAAAAGTGCCCAGAGTCACATTCCAAACCAGTTCCAGTGTCTTCAAGGACAGGAGAAGCTTCTCTGCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CCA 90 bp | TCACAGTCCTTCATATTTCTTTTCGAGTTGATCTGTAGCTTGTCTTaGCCAGTGTTTGACACATTGCTATTTTCCCAGCTACTCTGTCCC | + |
Preference number: 5 (lower is better) Translates to: SQSFIFLFELICSLS*PVFDTLLFSQLLCP Trigger: GGGACAGAGTAGCTGGGAAAATAGCAATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAACTCGAAAAGAAATATGAAGGACTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CCA 90 bp | TCTGGTACCATATTAAAACTTCTTGTTGTAAAATGCAAACTCTTCTaGTCCTGTTCATCACCCATCTCAGAATTACTGCTCCCTGGCATT | + |
Preference number: 5 (lower is better) Translates to: SGTILKLLVVKCKLF*SCSSPISELLLPGI Trigger: AATGCCAGGGAGCAGTAATTCTGAGATGGGTGATGAACAGGACCAGAAGAGTTTGCATTTTACAACAAGAAGTTTTAATATGGTACCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS GCA 72 bp | GATCCACCAGCGGCTTCACTGGGCTCTGCAGACGCTTaGAGAGAAGCTTCTCCTGTCCTTGAAGACACTGGA | + |
Preference number: 6 (lower is better) Translates to: DPPAASLGSADA*REASPVLEDTG Trigger: TCCAGTGTCTTCAAGGACAGGAGAAGCTTCTCTGCAAGCGTCTGCAGAGCCCAGTGAAGCCGCTGGTGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS TCA 72 bp | ATCAGACGCACCATGGTGAACTTCATTAGCCTGAACTaGTCCACCAGCGGCTTCACTGGGCTCTGCAGACGC | + |
Preference number: 6 (lower is better) Translates to: IRRTMVNFISLN*STSGFTGLCRR Trigger: GCGTCTGCAGAGCCCAGTGAAGCCGCTGGTGGATCAGTTCAGGCTAATGAAGTTCACCATGGTGCGTCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS TCA 72 bp | TTTGGCCGGCAGGTGAAGCGGCTTTCTGTAACGTGTTaGCGTTTGCATCCAGGAGAACCACAGGGGAGCCAA | + |
Preference number: 6 (lower is better) Translates to: FGRQVKRLSVTC*RLHPGEPQGSQ Trigger: TTGGCTCCCCTGTGGTTCTCCTGGATGCAAACGTCAACACGTTACAGAAAGCCGCTTCACCTGCCGGCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CAA 72 bp | TTTTGGCCGGCAGGTGAAGCGGCTTTCTGTAACGTGTaGACGTTTGCATCCAGGAGAACCACAGGGGAGCCA | + |
Preference number: 6 (lower is better) Translates to: FWPAGEAAFCNV*TFASRRTTGEP Trigger: TGGCTCCCCTGTGGTTCTCCTGGATGCAAACGTCAACACGTTACAGAAAGCCGCTTCACCTGCCGGCCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CCA 72 bp | TCTACTGGACTCCTTGAGACAGAAGCCACTCTCTTTTaGCCGGCAGGTGAAGCGGCTTTCTGTAACGTGTTG | + |
Preference number: 6 (lower is better) Translates to: STGLLETEATLF*PAGEAAFCNVL Trigger: CAACACGTTACAGAAAGCCGCTTCACCTGCCGGCCAAAAGAGAGTGGCTTCTGTCTCAAGGAGTCCAGTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CAA 90 bp | CTTCACTGGGCTCTGCAGACGCTTGCAGAGAAGCTTCTCCTGTCCTaGAAGACACTGGAACTGGTTTGGAATGTGACTCTGGGCACTTTT | + |
Preference number: 6 (lower is better) Translates to: LHWALQTLAEKLLLS*KTLELVWNVTLGTF Trigger: AAAAGTGCCCAGAGTCACATTCCAAACCAGTTCCAGTGTCTTCAAGGACAGGAGAAGCTTCTCTGCAAGCGTCTGCAGAGCCCAGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS GCA 72 bp | GCAGTGTTTTCAGGAGATGGCTTGTGGGCGCTCAGATaGCTGTCTTTGCTTGGTATCATCACCCAAAGTCGA | + |
Preference number: 6 (lower is better) Translates to: AVFSGDGLWALR*LSLLGIITQSR Trigger: TCGACTTTGGGTGATGATACCAAGCAAAGACAGGCATCTGAGCGCCCACAAGCCATCTCCTGAAAACACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS GCA 72 bp | TTCCCAGCTACTCTGTCCCTTCCTGAGCTCTTCAGCTaGTTTAGGCTTAGACACTCTCCTCTGGCTCTGTTT | + |
Preference number: 6 (lower is better) Translates to: FPATLSLPELFS*FRLRHSPLALF Trigger: AAACAGAGCCAGAGGAGAGTGTCTAAGCCTAAAGCAGCTGAAGAGCTCAGGAAGGGACAGAGTAGCTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CCA 72 bp | TCTTATAAGATCCATGGGGACAAGCTCTGCGGTTTCTaGGTCCTTCGCCAATGTTGCCTGAAAGGGATCTCC | + |
Preference number: 6 (lower is better) Translates to: SYKIHGDKLCGF*VLRQCCLKGIS Trigger: GGAGATCCCTTTCAGGCAACATTGGCGAAGGACCCAGAAACCGCAGAGCTTGTCCCCATGGATCTTATAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS GCA 72 bp | CTTGGAGGAGGCGGAGAAAATGGAACTGCTGCTGTGTaGCTGACCACAGAACTGGATTTACTTTTCCTCTTG | + |
Preference number: 6 (lower is better) Translates to: LGGGGENGTAAV*LTTELDLLFLL Trigger: CAAGAGGAAAAGTAAATCCAGTTCTGTGGTCAGGCACACAGCAGCAGTTCCATTTTCTCCGCCTCCTCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS GCA 72 bp | ATCTCGTGGTCTTATAAGATCCATGGGGACAAGCTCTaGGGTTTCTGGGTCCTTCGCCAATGTTGCCTGAAA | + |
Preference number: 6 (lower is better) Translates to: ISWSYKIHGDKL*GFWVLRQCCLK Trigger: TTTCAGGCAACATTGGCGAAGGACCCAGAAACCGCAGAGCTTGTCCCCATGGATCTTATAAGACCACGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CAA 72 bp | TGTTTTTATTTGAAGCCTGCCTATCTACTGGACTCCTaGAGACAGAAGCCACTCTCTTTTGGCCGGCAGGTG | + |
Preference number: 6 (lower is better) Translates to: CFYLKPAYLLDS*RQKPLSFGRQV Trigger: CACCTGCCGGCCAAAAGAGAGTGGCTTCTGTCTCAAGGAGTCCAGTAGATAGGCAGGCTTCAAATAAAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CAA 72 bp | TCAGGAGATGGCTTGTGGGCGCTCAGATGCCTGTCTTaGCTTGGTATCATCACCCAAAGTCGACTTGAAAAA | + |
Preference number: 6 (lower is better) Translates to: SGDGLWALRCLS*LGIITQSRLEK Trigger: TTTTTCAAGTCGACTTTGGGTGATGATACCAAGCAAAGACAGGCATCTGAGCGCCCACAAGCCATCTCCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CAA 90 bp | CTTTTCGAGTTGATCTGTAGCTTGTCTTGGCCAGTGTTTGACACATaGCTATTTTCCCAGCTACTCTGTCCCTTCCTGAGCTCTTCAGCT | + |
Preference number: 6 (lower is better) Translates to: LFELICSLSWPVFDT*LFSQLLCPFLSSSA Trigger: AGCTGAAGAGCTCAGGAAGGGACAGAGTAGCTGGGAAAATAGCAATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAACTCGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CAA 72 bp | TTGATCTGTAGCTTGTCTTGGCCAGTGTTTGACACATaGCTATTTTCCCAGCTACTCTGTCCCTTCCTGAGC | + |
Preference number: 6 (lower is better) Translates to: LICSLSWPVFDT*LFSQLLCPFLS Trigger: GCTCAGGAAGGGACAGAGTAGCTGGGAAAATAGCAATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CCA 72 bp | GTCCTGTTCATCACCCATCTCAGAATTACTGCTCCCTaGCATTTCATAATTCTTGAACCTGGAAGGTCCACT | + |
Preference number: 6 (lower is better) Translates to: VLFITHLRITAP*HFIILEPGRST Trigger: AGTGGACCTTCCAGGTTCAAGAATTATGAAATGCCAGGGAGCAGTAATTCTGAGATGGGTGATGAACAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS TCA 72 bp | TCTCAGAATTACTGCTCCCTGGCATTTCATAATTCTTaGACCTGGAAGGTCCACTTTCTTCCCACACTGAAC | + |
Preference number: 6 (lower is better) Translates to: SQNYCSLAFHNS*TWKVHFLPTLN Trigger: GTTCAGTGTGGGAAGAAAGTGGACCTTCCAGGTTCAAGAATTATGAAATGCCAGGGAGCAGTAATTCTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CCA 72 bp | TCTTTTAGGTCGAGAAATAGCAAGGCTCTTCTGAGTTaGGTCTGCCTCAATGATTTTCAATGGCTTCCTCTG | + |
Preference number: 6 (lower is better) Translates to: SFRSRNSKALLS*VCLNDFQWLPL Trigger: CAGAGGAAGCCATTGAAAATCATTGAGGCAGACCCAACTCAGAAGAGCCTTGCTATTTCTCGACCTAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS TCA 72 bp | GCCGAGGTTTCTTTGTGCCTTTATTTTCGTGGGTACTaGAGATGGGGATATTATTTCAAGCACAAGTTGTCC | + |
Preference number: 6 (lower is better) Translates to: AEVSLCLYFRGY*RWGYYFKHKLS Trigger: GGACAACTTGTGCTTGAAATAATATCCCCATCTTCAGTACCCACGAAAATAAAGGCACAAAGAAACCTCGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CAA 90 bp | GCTGAGCTTCCTCTATTGGGTGAGCCTTATCAGACTGTGTGTTTCTaGCAAACGTCATTGCAGATAAACTATGAGATTTCTCTCTTGACT | + |
Preference number: 6 (lower is better) Translates to: AELPLLGEPYQTVCF*QTSLQINYEISLLT Trigger: AGTCAAGAGAGAAATCTCATAGTTTATCTGCAATGACGTTTGCAAGAAACACACAGTCTGATAAGGCTCACCCAATAGAGGAAGCTCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CAA 90 bp | ACCTCTTCACAGTCCTTCATATTTCTTTTCGAGTTGATCTGTAGCTaGTCTTGGCCAGTGTTTGACACATTGCTATTTTCCCAGCTACTC | + |
Preference number: 6 (lower is better) Translates to: TSSQSFIFLFELICS*SWPVFDTLLFSQLL Trigger: GAGTAGCTGGGAAAATAGCAATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAACTCGAAAAGAAATATGAAGGACTGTGAAGAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS TCA 72 bp | TCACCTCTTCACAGTCCTTCATATTTCTTTTCGAGTTaGTCTGTAGCTTGTCTTGGCCAGTGTTTGACACAT | + |
Preference number: 6 (lower is better) Translates to: SPLHSPSYFFSS*SVACLGQCLTH Trigger: ATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAACTCGAAAAGAAATATGAAGGACTGTGAAGAGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CAA 72 bp | TGGCTATTGAGATGGGTCGGCTTCTTGGTAACTTTTTaGTTGACTTTGCCGAGGTTTCTTTGTGCCTTTATT | + |
Preference number: 6 (lower is better) Translates to: WLLRWVGFLVTF*LTLPRFLCAFI Trigger: AATAAAGGCACAAAGAAACCTCGGCAAAGTCAACAAAAAAGTTACCAAGAAGCCGACCCATCTCAATAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CAA 90 bp | GAAGGTCCACTTTCTTCCCACACTGAACGTTTAGACATTTCTGAATaGGAAGCAGACTCCATTTGTGTCTTGCTTGTATATTCCTCAGTA | + |
Preference number: 6 (lower is better) Translates to: EGPLSSHTERLDISE*EADSICVLLVYSSV Trigger: TACTGAGGAATATACAAGCAAGACACAAATGGAGTCTGCTTCCAATTCAGAAATGTCTAAACGTTCAGTGTGGGAAGAAAGTGGACCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CAA 72 bp | CCTCTATTGGGTGAGCCTTATCAGACTGTGTGTTTCTaGCAAACGTCATTGCAGATAAACTATGAGATTTCT | + |
Preference number: 6 (lower is better) Translates to: PLLGEPYQTVCF*QTSLQINYEIS Trigger: AGAAATCTCATAGTTTATCTGCAATGACGTTTGCAAGAAACACACAGTCTGATAAGGCTCACCCAATAGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CAA 72 bp | CAGTCCTTCATATTTCTTTTCGAGTTGATCTGTAGCTaGTCTTGGCCAGTGTTTGACACATTGCTATTTTCC | + |
Preference number: 6 (lower is better) Translates to: QSFIFLFELICS*SWPVFDTLLFS Trigger: GGAAAATAGCAATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAACTCGAAAAGAAATATGAAGGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CCA 72 bp | TTCATATTTCTTTTCGAGTTGATCTGTAGCTTGTCTTaGCCAGTGTTTGACACATTGCTATTTTCCCAGCTA | + |
Preference number: 6 (lower is better) Translates to: FIFLFELICSLS*PVFDTLLFSQL Trigger: TAGCTGGGAAAATAGCAATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAACTCGAAAAGAAATATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CAA 72 bp | CAAACGTCATTGCAGATAAACTATGAGATTTCTCTCTaGACTTCTTACCTTGAAGCAGTGCAGTGTTTTCAG | + |
Preference number: 6 (lower is better) Translates to: QTSLQINYEISL*TSYLEAVQCFQ Trigger: CTGAAAACACTGCACTGCTTCAAGGTAAGAAGTCAAGAGAGAAATCTCATAGTTTATCTGCAATGACGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |
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CDS CAA 72 bp | TTTCTGAATTGGAAGCAGACTCCATTTGTGTCTTGCTaGTATATTCCTCAGTATGAGACTTTAAATGAACAT | + |
Preference number: 6 (lower is better) Translates to: FLNWKQTPFVSC*YIPQYETLNEH Trigger: ATGTTCATTTAAAGTCTCATACTGAGGAATATACAAGCAAGACACAAATGGAGTCTGCTTCCAATTCAGAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031170.10 |