RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CENPC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029253

Ensembl transcript IDs: ENSMUST00000031170.10

Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CCCTTCCTGAGCTCTTCAGCTGCTTTAGGCTTAGACACTCTCCTCTaGCTCTGTTTCGTAGTCCTTTCCCATGCGGGTGGGGTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: PFLSSSAALGLDTLL*LCFVVLSHAGGVLA
Trigger: TGCCAAAACCCCACCCGCATGGGAAAGGACTACGAAACAGAGCCAGAGGAGAGTGTCTAAGCCTAAAGCAGCTGAAGAGCTCAGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CCA 90 bp GCCTGCCTATCTACTGGACTCCTTGAGACAGAAGCCACTCTCTTTTaGCCGGCAGGTGAAGCGGCTTTCTGTAACGTGTTGACGTTTGCA +
Preference number: 5 (lower is better)
Translates to: ACLSTGLLETEATLF*PAGEAAFCNVLTFA
Trigger: TGCAAACGTCAACACGTTACAGAAAGCCGCTTCACCTGCCGGCCAAAAGAGAGTGGCTTCTGTCTCAAGGAGTCCAGTAGATAGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS GCA 90 bp TTCATGTCACTTGGAGGAGGCGGAGAAAATGGAACTGCTGCTGTGTaGCTGACCACAGAACTGGATTTACTTTTCCTCTTGACAGTCTCT +
Preference number: 5 (lower is better)
Translates to: FMSLGGGGENGTAAV*LTTELDLLFLLTVS
Trigger: AGAGACTGTCAAGAGGAAAAGTAAATCCAGTTCTGTGGTCAGGCACACAGCAGCAGTTCCATTTTCTCCGCCTCCTCCAAGTGACATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CCA 90 bp AGTAGTTGCCGGGTTTTCTTCAACAGAGAGCTGAGCTTCCTCTATTaGGTGAGCCTTATCAGACTGTGTGTTTCTTGCAAACGTCATTGC +
Preference number: 5 (lower is better)
Translates to: SSCRVFFNRELSFLY*VSLIRLCVSCKRHC
Trigger: GCAATGACGTTTGCAAGAAACACACAGTCTGATAAGGCTCACCCAATAGAGGAAGCTCAGCTCTCTGTTGAAGAAAACCCGGCAACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CCA 90 bp CTTGCAGAGAAGCTTCTCCTGTCCTTGAAGACACTGGAACTGGTTTaGAATGTGACTCTGGGCACTTTTTGCTTGATGATTGACTATAAT +
Preference number: 5 (lower is better)
Translates to: LAEKLLLSLKTLELV*NVTLGTFCLMIDYN
Trigger: ATTATAGTCAATCATCAAGCAAAAAGTGCCCAGAGTCACATTCCAAACCAGTTCCAGTGTCTTCAAGGACAGGAGAAGCTTCTCTGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CCA 90 bp TCACAGTCCTTCATATTTCTTTTCGAGTTGATCTGTAGCTTGTCTTaGCCAGTGTTTGACACATTGCTATTTTCCCAGCTACTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: SQSFIFLFELICSLS*PVFDTLLFSQLLCP
Trigger: GGGACAGAGTAGCTGGGAAAATAGCAATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAACTCGAAAAGAAATATGAAGGACTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CCA 90 bp TCTGGTACCATATTAAAACTTCTTGTTGTAAAATGCAAACTCTTCTaGTCCTGTTCATCACCCATCTCAGAATTACTGCTCCCTGGCATT +
Preference number: 5 (lower is better)
Translates to: SGTILKLLVVKCKLF*SCSSPISELLLPGI
Trigger: AATGCCAGGGAGCAGTAATTCTGAGATGGGTGATGAACAGGACCAGAAGAGTTTGCATTTTACAACAAGAAGTTTTAATATGGTACCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS GCA 72 bp GATCCACCAGCGGCTTCACTGGGCTCTGCAGACGCTTaGAGAGAAGCTTCTCCTGTCCTTGAAGACACTGGA +
Preference number: 6 (lower is better)
Translates to: DPPAASLGSADA*REASPVLEDTG
Trigger: TCCAGTGTCTTCAAGGACAGGAGAAGCTTCTCTGCAAGCGTCTGCAGAGCCCAGTGAAGCCGCTGGTGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS TCA 72 bp ATCAGACGCACCATGGTGAACTTCATTAGCCTGAACTaGTCCACCAGCGGCTTCACTGGGCTCTGCAGACGC +
Preference number: 6 (lower is better)
Translates to: IRRTMVNFISLN*STSGFTGLCRR
Trigger: GCGTCTGCAGAGCCCAGTGAAGCCGCTGGTGGATCAGTTCAGGCTAATGAAGTTCACCATGGTGCGTCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS TCA 72 bp TTTGGCCGGCAGGTGAAGCGGCTTTCTGTAACGTGTTaGCGTTTGCATCCAGGAGAACCACAGGGGAGCCAA +
Preference number: 6 (lower is better)
Translates to: FGRQVKRLSVTC*RLHPGEPQGSQ
Trigger: TTGGCTCCCCTGTGGTTCTCCTGGATGCAAACGTCAACACGTTACAGAAAGCCGCTTCACCTGCCGGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CAA 72 bp TTTTGGCCGGCAGGTGAAGCGGCTTTCTGTAACGTGTaGACGTTTGCATCCAGGAGAACCACAGGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: FWPAGEAAFCNV*TFASRRTTGEP
Trigger: TGGCTCCCCTGTGGTTCTCCTGGATGCAAACGTCAACACGTTACAGAAAGCCGCTTCACCTGCCGGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CCA 72 bp TCTACTGGACTCCTTGAGACAGAAGCCACTCTCTTTTaGCCGGCAGGTGAAGCGGCTTTCTGTAACGTGTTG +
Preference number: 6 (lower is better)
Translates to: STGLLETEATLF*PAGEAAFCNVL
Trigger: CAACACGTTACAGAAAGCCGCTTCACCTGCCGGCCAAAAGAGAGTGGCTTCTGTCTCAAGGAGTCCAGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CAA 90 bp CTTCACTGGGCTCTGCAGACGCTTGCAGAGAAGCTTCTCCTGTCCTaGAAGACACTGGAACTGGTTTGGAATGTGACTCTGGGCACTTTT +
Preference number: 6 (lower is better)
Translates to: LHWALQTLAEKLLLS*KTLELVWNVTLGTF
Trigger: AAAAGTGCCCAGAGTCACATTCCAAACCAGTTCCAGTGTCTTCAAGGACAGGAGAAGCTTCTCTGCAAGCGTCTGCAGAGCCCAGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS GCA 72 bp GCAGTGTTTTCAGGAGATGGCTTGTGGGCGCTCAGATaGCTGTCTTTGCTTGGTATCATCACCCAAAGTCGA +
Preference number: 6 (lower is better)
Translates to: AVFSGDGLWALR*LSLLGIITQSR
Trigger: TCGACTTTGGGTGATGATACCAAGCAAAGACAGGCATCTGAGCGCCCACAAGCCATCTCCTGAAAACACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS GCA 72 bp TTCCCAGCTACTCTGTCCCTTCCTGAGCTCTTCAGCTaGTTTAGGCTTAGACACTCTCCTCTGGCTCTGTTT +
Preference number: 6 (lower is better)
Translates to: FPATLSLPELFS*FRLRHSPLALF
Trigger: AAACAGAGCCAGAGGAGAGTGTCTAAGCCTAAAGCAGCTGAAGAGCTCAGGAAGGGACAGAGTAGCTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CCA 72 bp TCTTATAAGATCCATGGGGACAAGCTCTGCGGTTTCTaGGTCCTTCGCCAATGTTGCCTGAAAGGGATCTCC +
Preference number: 6 (lower is better)
Translates to: SYKIHGDKLCGF*VLRQCCLKGIS
Trigger: GGAGATCCCTTTCAGGCAACATTGGCGAAGGACCCAGAAACCGCAGAGCTTGTCCCCATGGATCTTATAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS GCA 72 bp CTTGGAGGAGGCGGAGAAAATGGAACTGCTGCTGTGTaGCTGACCACAGAACTGGATTTACTTTTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: LGGGGENGTAAV*LTTELDLLFLL
Trigger: CAAGAGGAAAAGTAAATCCAGTTCTGTGGTCAGGCACACAGCAGCAGTTCCATTTTCTCCGCCTCCTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS GCA 72 bp ATCTCGTGGTCTTATAAGATCCATGGGGACAAGCTCTaGGGTTTCTGGGTCCTTCGCCAATGTTGCCTGAAA +
Preference number: 6 (lower is better)
Translates to: ISWSYKIHGDKL*GFWVLRQCCLK
Trigger: TTTCAGGCAACATTGGCGAAGGACCCAGAAACCGCAGAGCTTGTCCCCATGGATCTTATAAGACCACGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CAA 72 bp TGTTTTTATTTGAAGCCTGCCTATCTACTGGACTCCTaGAGACAGAAGCCACTCTCTTTTGGCCGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: CFYLKPAYLLDS*RQKPLSFGRQV
Trigger: CACCTGCCGGCCAAAAGAGAGTGGCTTCTGTCTCAAGGAGTCCAGTAGATAGGCAGGCTTCAAATAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CAA 72 bp TCAGGAGATGGCTTGTGGGCGCTCAGATGCCTGTCTTaGCTTGGTATCATCACCCAAAGTCGACTTGAAAAA +
Preference number: 6 (lower is better)
Translates to: SGDGLWALRCLS*LGIITQSRLEK
Trigger: TTTTTCAAGTCGACTTTGGGTGATGATACCAAGCAAAGACAGGCATCTGAGCGCCCACAAGCCATCTCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CAA 90 bp CTTTTCGAGTTGATCTGTAGCTTGTCTTGGCCAGTGTTTGACACATaGCTATTTTCCCAGCTACTCTGTCCCTTCCTGAGCTCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: LFELICSLSWPVFDT*LFSQLLCPFLSSSA
Trigger: AGCTGAAGAGCTCAGGAAGGGACAGAGTAGCTGGGAAAATAGCAATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAACTCGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CAA 72 bp TTGATCTGTAGCTTGTCTTGGCCAGTGTTTGACACATaGCTATTTTCCCAGCTACTCTGTCCCTTCCTGAGC +
Preference number: 6 (lower is better)
Translates to: LICSLSWPVFDT*LFSQLLCPFLS
Trigger: GCTCAGGAAGGGACAGAGTAGCTGGGAAAATAGCAATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CCA 72 bp GTCCTGTTCATCACCCATCTCAGAATTACTGCTCCCTaGCATTTCATAATTCTTGAACCTGGAAGGTCCACT +
Preference number: 6 (lower is better)
Translates to: VLFITHLRITAP*HFIILEPGRST
Trigger: AGTGGACCTTCCAGGTTCAAGAATTATGAAATGCCAGGGAGCAGTAATTCTGAGATGGGTGATGAACAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS TCA 72 bp TCTCAGAATTACTGCTCCCTGGCATTTCATAATTCTTaGACCTGGAAGGTCCACTTTCTTCCCACACTGAAC +
Preference number: 6 (lower is better)
Translates to: SQNYCSLAFHNS*TWKVHFLPTLN
Trigger: GTTCAGTGTGGGAAGAAAGTGGACCTTCCAGGTTCAAGAATTATGAAATGCCAGGGAGCAGTAATTCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CCA 72 bp TCTTTTAGGTCGAGAAATAGCAAGGCTCTTCTGAGTTaGGTCTGCCTCAATGATTTTCAATGGCTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: SFRSRNSKALLS*VCLNDFQWLPL
Trigger: CAGAGGAAGCCATTGAAAATCATTGAGGCAGACCCAACTCAGAAGAGCCTTGCTATTTCTCGACCTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS TCA 72 bp GCCGAGGTTTCTTTGTGCCTTTATTTTCGTGGGTACTaGAGATGGGGATATTATTTCAAGCACAAGTTGTCC +
Preference number: 6 (lower is better)
Translates to: AEVSLCLYFRGY*RWGYYFKHKLS
Trigger: GGACAACTTGTGCTTGAAATAATATCCCCATCTTCAGTACCCACGAAAATAAAGGCACAAAGAAACCTCGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CAA 90 bp GCTGAGCTTCCTCTATTGGGTGAGCCTTATCAGACTGTGTGTTTCTaGCAAACGTCATTGCAGATAAACTATGAGATTTCTCTCTTGACT +
Preference number: 6 (lower is better)
Translates to: AELPLLGEPYQTVCF*QTSLQINYEISLLT
Trigger: AGTCAAGAGAGAAATCTCATAGTTTATCTGCAATGACGTTTGCAAGAAACACACAGTCTGATAAGGCTCACCCAATAGAGGAAGCTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CAA 90 bp ACCTCTTCACAGTCCTTCATATTTCTTTTCGAGTTGATCTGTAGCTaGTCTTGGCCAGTGTTTGACACATTGCTATTTTCCCAGCTACTC +
Preference number: 6 (lower is better)
Translates to: TSSQSFIFLFELICS*SWPVFDTLLFSQLL
Trigger: GAGTAGCTGGGAAAATAGCAATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAACTCGAAAAGAAATATGAAGGACTGTGAAGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS TCA 72 bp TCACCTCTTCACAGTCCTTCATATTTCTTTTCGAGTTaGTCTGTAGCTTGTCTTGGCCAGTGTTTGACACAT +
Preference number: 6 (lower is better)
Translates to: SPLHSPSYFFSS*SVACLGQCLTH
Trigger: ATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAACTCGAAAAGAAATATGAAGGACTGTGAAGAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CAA 72 bp TGGCTATTGAGATGGGTCGGCTTCTTGGTAACTTTTTaGTTGACTTTGCCGAGGTTTCTTTGTGCCTTTATT +
Preference number: 6 (lower is better)
Translates to: WLLRWVGFLVTF*LTLPRFLCAFI
Trigger: AATAAAGGCACAAAGAAACCTCGGCAAAGTCAACAAAAAAGTTACCAAGAAGCCGACCCATCTCAATAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CAA 90 bp GAAGGTCCACTTTCTTCCCACACTGAACGTTTAGACATTTCTGAATaGGAAGCAGACTCCATTTGTGTCTTGCTTGTATATTCCTCAGTA +
Preference number: 6 (lower is better)
Translates to: EGPLSSHTERLDISE*EADSICVLLVYSSV
Trigger: TACTGAGGAATATACAAGCAAGACACAAATGGAGTCTGCTTCCAATTCAGAAATGTCTAAACGTTCAGTGTGGGAAGAAAGTGGACCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CAA 72 bp CCTCTATTGGGTGAGCCTTATCAGACTGTGTGTTTCTaGCAAACGTCATTGCAGATAAACTATGAGATTTCT +
Preference number: 6 (lower is better)
Translates to: PLLGEPYQTVCF*QTSLQINYEIS
Trigger: AGAAATCTCATAGTTTATCTGCAATGACGTTTGCAAGAAACACACAGTCTGATAAGGCTCACCCAATAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CAA 72 bp CAGTCCTTCATATTTCTTTTCGAGTTGATCTGTAGCTaGTCTTGGCCAGTGTTTGACACATTGCTATTTTCC +
Preference number: 6 (lower is better)
Translates to: QSFIFLFELICS*SWPVFDTLLFS
Trigger: GGAAAATAGCAATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAACTCGAAAAGAAATATGAAGGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CCA 72 bp TTCATATTTCTTTTCGAGTTGATCTGTAGCTTGTCTTaGCCAGTGTTTGACACATTGCTATTTTCCCAGCTA +
Preference number: 6 (lower is better)
Translates to: FIFLFELICSLS*PVFDTLLFSQL
Trigger: TAGCTGGGAAAATAGCAATGTGTCAAACACTGGCCAAGACAAGCTACAGATCAACTCGAAAAGAAATATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CAA 72 bp CAAACGTCATTGCAGATAAACTATGAGATTTCTCTCTaGACTTCTTACCTTGAAGCAGTGCAGTGTTTTCAG +
Preference number: 6 (lower is better)
Translates to: QTSLQINYEISL*TSYLEAVQCFQ
Trigger: CTGAAAACACTGCACTGCTTCAAGGTAAGAAGTCAAGAGAGAAATCTCATAGTTTATCTGCAATGACGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10
CDS CAA 72 bp TTTCTGAATTGGAAGCAGACTCCATTTGTGTCTTGCTaGTATATTCCTCAGTATGAGACTTTAAATGAACAT +
Preference number: 6 (lower is better)
Translates to: FLNWKQTPFVSC*YIPQYETLNEH
Trigger: ATGTTCATTTAAAGTCTCATACTGAGGAATATACAAGCAAGACACAAATGGAGTCTGCTTCCAATTCAGAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000031170.10