Pregenerated sensors for CENPB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068267Ensembl transcript IDs: ENSMUST00000089510.5
Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACAGCAGTGAGGGGGACCTCAGCCCCTGGGCCTGTCTCAGAGCCTaGAGCCTGGAACCTGGCGAAGCGTTGCTGAAAGCCCTGGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: NSSEGDLSPWACLRA*SLEPGEALLKALGF Trigger: GAAGCCCAGGGCTTTCAGCAACGCTTCGCCAGGTTCCAGGCTCCAGGCTCTGAGACAGGCCCAGGGGCTGAGGTCCCCCTCACTGCTGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR CCA 90 bp | GGGCTTCTCCAGCCATCTCCAGCAGCTGCCCAGAGTTCTCTGCCTTaGGCAGGAGCAGCCCATCTGGGCTGGGGTACAGCTATGTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: GLLQPSPAAAQSSLP*AGAAHLGWGTAMSS Trigger: GCTGGACATAGCTGTACCCCAGCCCAGATGGGCTGCTCCTGCCCAAGGCAGAGAACTCTGGGCAGCTGCTGGAGATGGCTGGAGAAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR CCA 90 bp | TGGGGGTCTGCAGAGGATGAGGCAGAGGCCTGTAGCTACCCAGATTaGAGGTGCCTGCTGTCACGCCCCTGGAGGGCCTCCTGGAAACCT | + |
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Preference number: 1 (lower is better) Translates to: WGSAEDEAEACSYPD*RCLLSRPWRASWKP Trigger: AGGTTTCCAGGAGGCCCTCCAGGGGCGTGACAGCAGGCACCTCCAATCTGGGTAGCTACAGGCCTCTGCCTCATCCTCTGCAGACCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR TCA 90 bp | GAGCTTCCAGGACCCAACCCTGGCTGCTGCTGTGATCTAGCCCACTaGTGGCATGGTGTGGTAGCACCGGACAGCTCCCCACCCATCCAG | + |
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Preference number: 1 (lower is better) Translates to: ELPGPNPGCCCDLAH*WHGVVAPDSSPPIQ Trigger: CTGGATGGGTGGGGAGCTGTCCGGTGCTACCACACCATGCCATCAGTGGGCTAGATCACAGCAGCAGCCAGGGTTGGGTCCTGGAAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR GCA 90 bp | CAGAGGATGAGGCAGAGGCCTGTAGCTACCCAGATTGGAGGTGCCTaGTGTCACGCCCCTGGAGGGCCTCCTGGAAACCTCCAATCTGGA | + |
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Preference number: 1 (lower is better) Translates to: QRMRQRPVATQIGGA*CHAPGGPPGNLQSG Trigger: TCCAGATTGGAGGTTTCCAGGAGGCCCTCCAGGGGCGTGACAGCAGGCACCTCCAATCTGGGTAGCTACAGGCCTCTGCCTCATCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR CCA 90 bp | TGGAAAGAAAACCAAGGGCCAAAGACTGGGCCAGAGAAAGGGATCTaGGGAGGTGGAAAGCAGGCAGAGGCAGGCTCGGGAGCCCGCCCT | + |
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Preference number: 1 (lower is better) Translates to: WKENQGPKTGPEKGI*GGGKQAEAGSGARP Trigger: AGGGCGGGCTCCCGAGCCTGCCTCTGCCTGCTTTCCACCTCCCCAGATCCCTTTCTCTGGCCCAGTCTTTGGCCCTTGGTTTTCTTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR TCA 90 bp | ACTCTCTGGCCAAGAGCTTCCAGGACCCAACCCTGGCTGCTGCTGTaGTCTAGCCCACTGATGGCATGGTGTGGTAGCACCGGACAGCTC | + |
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Preference number: 1 (lower is better) Translates to: TLWPRASRTQPWLLL*SSPLMAWCGSTGQL Trigger: GAGCTGTCCGGTGCTACCACACCATGCCATCAGTGGGCTAGATCACAGCAGCAGCCAGGGTTGGGTCCTGGAAGCTCTTGGCCAGAGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR CCA 90 bp | TGGGCACTGAAAGAAGGGCATGCCGCCTTCACCTTTGGACTGGAGTaGGGGGAGTGGCCTTGCACAGCGAGCTACCAATTCATGGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: WALKEGHAAFTFGLE*GEWPCTASYQFMGL Trigger: CAGCCCCATGAATTGGTAGCTCGCTGTGCAAGGCCACTCCCCCCACTCCAGTCCAAAGGTGAAGGCGGCATGCCCTTCTTTCAGTGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR CCA 90 bp | TGGAACCTGAAGGCCTCAGAAAGGAAGAGCCATGAGGGGAGGGGCTaGGCACTGAAAGAAGGGCATGCCGCCTTCACCTTTGGACTGGAG | + |
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Preference number: 1 (lower is better) Translates to: WNLKASERKSHEGRG*ALKEGHAAFTFGLE Trigger: CTCCAGTCCAAAGGTGAAGGCGGCATGCCCTTCTTTCAGTGCCCAGCCCCTCCCCTCATGGCTCTTCCTTTCTGAGGCCTTCAGGTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR CCA 90 bp | TACCCAGATTGGAGGTGCCTGCTGTCACGCCCCTGGAGGGCCTCCTaGAAACCTCCAATCTGGAAAGAAAACCAAGGGCCAAAGACTGGG | + |
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Preference number: 1 (lower is better) Translates to: YPDWRCLLSRPWRAS*KPPIWKENQGPKTG Trigger: CCCAGTCTTTGGCCCTTGGTTTTCTTTCCAGATTGGAGGTTTCCAGGAGGCCCTCCAGGGGCGTGACAGCAGGCACCTCCAATCTGGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR TCA 90 bp | GCTGACTTTAGCTTTGGTGGGCTGGGTCATCAGGTGCATATGGGCTaGCCTGCTCCCTATCTCCTACCCCACCCGGAGCTTCTCACTAAC | + |
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Preference number: 1 (lower is better) Translates to: ADFSFGGLGHQVHMG*PAPYLLPHPELLTN Trigger: GTTAGTGAGAAGCTCCGGGTGGGGTAGGAGATAGGGAGCAGGTCAGCCCATATGCACCTGATGACCCAGCCCACCAAAGCTAAAGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR CCA 90 bp | ATCCCAAAGTTGTTCTTGTTCCTGCTGACTTTAGCTTTGGTGGGCTaGGTCATCAGGTGCATATGGGCTGACCTGCTCCCTATCTCCTAC | + |
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Preference number: 1 (lower is better) Translates to: IPKLFLFLLTLALVG*VIRCIWADLLPISY Trigger: GTAGGAGATAGGGAGCAGGTCAGCCCATATGCACCTGATGACCCAGCCCACCAAAGCTAAAGTCAGCAGGAACAAGAACAACTTTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR GCA 90 bp | CTGTACACTGAAGACAAGAGCTTCTACAGACAGGGTCACAGCCCTTaGTTCCCTCTAAAGGCTAGTCTGAACTGGTCTGAACTGGAAATT | + |
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Preference number: 1 (lower is better) Translates to: LYTEDKSFYRQGHSP*FPLKASLNWSELEI Trigger: AATTTCCAGTTCAGACCAGTTCAGACTAGCCTTTAGAGGGAAGCAAGGGCTGTGACCCTGTCTGTAGAAGCTCTTGTCTTCAGTGTACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR CCA 90 bp | GCTGCAATTTGTTTCCCAGTAACTTTGCCTTCTGTTACTGTGCTGTaGCTAACAGGCTTGAAAATGTCCATCAAAGGCCGGAAGAACTCC | + |
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Preference number: 1 (lower is better) Translates to: AAICFPVTLPSVTVL*LTGLKMSIKGRKNS Trigger: GGAGTTCTTCCGGCCTTTGATGGACATTTTCAAGCCTGTTAGCCACAGCACAGTAACAGAAGGCAAAGTTACTGGGAAACAAATTGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR CAA 90 bp | TGGGCTTCTCCAGCCATCTCCAGCAGCTGCCCAGAGTTCTCTGCCTaGGGCAGGAGCAGCCCATCTGGGCTGGGGTACAGCTATGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: WASPAISSSCPEFSA*GRSSPSGLGYSYVQ Trigger: CTGGACATAGCTGTACCCCAGCCCAGATGGGCTGCTCCTGCCCAAGGCAGAGAACTCTGGGCAGCTGCTGGAGATGGCTGGAGAAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | ACGGTAGGGAGAACTTGGTGGCTGGGCTATGTTGGGTTTGGGGATTTACCAGGGTGGGTGGCTGGACTCTaGGCCCAGCCCCAGGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: TVGRTWWLGYVGFGDLPGWVAGL*AQPQAP Trigger: AGGGGCCTGGGGCTGGGCCCAGAGTCCAGCCACCCA...CCCTGGTAAATCCCCAAACCCAACATAGCCCAGCCACCAAGTTCTCCCTACCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | AGGATGAGGCAGAGGCCTGTAGCTACCCAGATTGGAGGTGCCTGCTGTCACGCCCACCAAAGACCTGGTTaGGTGGCAGGGGGAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: RMRQRPVATQIGGACCHAHQRPG*VAGGEA Trigger: TGCCTCTCCCCCTGCCACCCAACCAGGTCTTTGGTG...GGCGTGACAGCAGGCACCTCCAATCTGGGTAGCTACAGGCCTCTGCCTCATCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | GTGTCACCGCCTGCCACTCACCCCAGTCACGTCCATCTACTCAAACCTTGCTTCCCCCCACCAAAGACCTaGTTGGGTGGCAGGGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: VSPPATHPSHVHLLKPCFPPPKT*LGGRGR Trigger: TCTCCCCCTGCCACCCAACCAGGTCTTTGGTGGGGG...GAAGCAAGGTTTGAGTAGATGGACGTGACTGGGGTGAGTGGCAGGCGGTGACAC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR TCA 90 bp | TTCCACGGTAGGGAGAACTTGGTGGCTGGGCTATGTTGGGTTTGGGGATTTACCGGAGGGGCTGGGCACTaGAAGAAGGGCATGCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: FHGRENLVAGLCWVWGFTGGAGH*KKGMPP Trigger: AGGCGGCATGCCCTTCTTTCAGTGCCCAGCCCCTCC...GGTAAATCCCCAAACCCAACATAGCCCAGCCACCAAGTTCTCCCTACCGTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR TCA 90 bp | TTCCACGGTAGGGAGAACTTGGTGGCTGGGCTATGTTGGGTTTGGGGATTTACCACCCATCCAGTGCCCTaGGCCCAGGGACTAATGGGG | + |
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Preference number: 2 (lower is better) Translates to: FHGRENLVAGLCWVWGFTTHPVP*AQGLMG Trigger: CCCCATTAGTCCCTGGGCTCAGGGCACTGGATGGGT...GGTAAATCCCCAAACCCAACATAGCCCAGCCACCAAGTTCTCCCTACCGTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | TTCCACGGTAGGGAGAACTTGGTGGCTGGGCTATGTTGGGTTTGGGGATTTACCTCAGAGCCTGGAGCCTaGAACCTGGCGAAGCGTTGC | + |
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Preference number: 2 (lower is better) Translates to: FHGRENLVAGLCWVWGFTSEPGA*NLAKRC Trigger: GCAACGCTTCGCCAGGTTCCAGGCTCCAGGCTCTGA...GGTAAATCCCCAAACCCAACATAGCCCAGCCACCAAGTTCTCCCTACCGTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | CTTTTCCTTGGCTGGAACCTGAAGGCCTCAGAAAGGAAGAGCCATGAGGGGAGGAGCCCACTGATGGCATaGTGTGGTAGCACCGGACAG | + |
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Preference number: 2 (lower is better) Translates to: LFLGWNLKASERKSHEGRSPLMA*CGSTGQ Trigger: CTGTCCGGTGCTACCACACCATGCCATCAGTGGGCT...CCTCCCCTCATGGCTCTTCCTTTCTGAGGCCTTCAGGTTCCAGCCAAGGAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | ACGGTAGGGAGAACTTGGTGGCTGGGCTATGTTGGGTTTGGGGATTTACCAGGGAAAGACCTGGTTGGGTaGCAGGGGGAGAGGCACTCT | + |
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Preference number: 2 (lower is better) Translates to: TVGRTWWLGYVGFGDLPGKDLVG*QGERHS Trigger: AGAGTGCCTCTCCCCCTGCCACCCAACCAGGTCTTT...CCCTGGTAAATCCCCAAACCCAACATAGCCCAGCCACCAAGTTCTCCCTACCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR CAA 90 bp | GCACCTCCAGCTCCAACCTGGCTCACAGCCATCCCAAAGTTGTTCTaGTTCCTGCTGACTTTAGCTTTGGTGGGCTGGGTCATCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: APPAPTWLTAIPKLF*FLLTLALVGWVIRC Trigger: GCACCTGATGACCCAGCCCACCAAAGCTAAAGTCAGCAGGAACAAGAACAACTTTGGGATGGCTGTGAGCCAGGTTGGAGCTGGAGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR GCA 90 bp | TCCCCTAGTGTTAGAAATACAAGACTCAACCCTTCTGGCCCCCACCTAAGGCAACTGCCCAGAGTTCTCTaGCTTGGGCAGGAGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: SPSVRNTRLNPSGPHLRQLPRVL*LGQEQP Trigger: GGGCTGCTCCTGCCCAAGGCAGAGAACTCTGGGCAG...TTGCCTTAGGTGGGGGCCAGAAGGGTTGAGTCTTGTATTTCTAACACTAGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR GCA 90 bp | GTGGCTAACAGGCTTGAAAATGTCCATCAAAGGCCGGAAGAACTCCCTCGTAGGGGACCCAACCCTGGCTaGTGCTGTGATCTAGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: VANRLENVHQRPEELPRRGPNPG*CCDLAH Trigger: GTGGGCTAGATCACAGCAGCAGCCAGGGTTGGGTCC...CCTACGAGGGAGTTCTTCCGGCCTTTGATGGACATTTTCAAGCCTGTTAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR CAA 90 bp | CTCACAGCCATCCCAAAGTTGTTCTTGTTCCTGCTGACTTTAGCTTaGGTGGGCTGGGTCATCAGGTGCATATGGGCTGACCTGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LTAIPKLFLFLLTLA*VGWVIRCIWADLLP Trigger: AGGGAGCAGGTCAGCCCATATGCACCTGATGACCCAGCCCACCAAAGCTAAAGTCAGCAGGAACAAGAACAACTTTGGGATGGCTGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTAACAGGCTTGAAAATGTCCATCAAAGGCCGGAAGAACTCCCTCGTAGGGGGCTGCTAGTTTTGTaGGGGCCTAGGCTAGACCTT | + |
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Preference number: 2 (lower is better) Translates to: VANRLENVHQRPEELPRRGLLVL*GPRLDL Trigger: AAGGTCTAGCCTAGGCCCCCACAAAACTAGCAGCCC...CCTACGAGGGAGTTCTTCCGGCCTTTGATGGACATTTTCAAGCCTGTTAGCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGGACAGATTTATTGAATTCAAGCTGGGAAAGGAGCACCTGGGTGGCTGGCCCTGGAGGGCCTCCTaGAAACCTCCAATCTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: GVDRFIEFKLGKEHLGGWPWRAS*KPPIWK Trigger: TTTCCAGATTGGAGGTTTCCAGGAGGCCCTCCAGGG...CCAGCCACCCAGGTGCTCCTTTCCCAGCTTGAATTCAATAAATCTGTCCACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGAGAAAGTTTGCTTCCAATAGACTAATGGATGTGGCACTGGGCATATTAGAGCACCTGGGTGGCTaGACTCTGGGCCCAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: GRRKFASNRLMDVALGILEHLGG*TLGPAP Trigger: TGGGGCTGGGCCCAGAGTCCAGCCACCCAGGTGCTC...TAATATGCCCAGTGCCACATCCATTAGTCTATTGGAAGCAAACTTTCTCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR CAA 90 bp | GGGAGTGGCCTTGCACAGCGAGCTACCAATTCATGGGGCTGCAATTaGTTTCCCAGTAACTTTGCCTTCTGTTACTGTGCTGTGGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: GSGLAQRATNSWGCN*FPSNFAFCYCAVAN Trigger: GTTAGCCACAGCACAGTAACAGAAGGCAAAGTTACTGGGAAACAAATTGCAGCCCCATGAATTGGTAGCTCGCTGTGCAAGGCCACTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | GCTCCAACCTGGCTCACAGCCATCCCAAAGTTGTTCTTGTTCCTGCTGACTTTAGTCATCAGGTGCATATaGGCTGACCTGCTCCCTATC | + |
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Preference number: 2 (lower is better) Translates to: APTWLTAIPKLFLFLLTLVIRCI*ADLLPI Trigger: GATAGGGAGCAGGTCAGCCCATATGCACCTGATGAC...TAAAGTCAGCAGGAACAAGAACAACTTTGGGATGGCTGTGAGCCAGGTTGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | TCCCCTAGTGTTAGAAATACAAGACTCAACCCTTCTGGCCCCCACCTAAGGCAAGATCAGGCTTTTCCTTaGCTGGAACCTGAAGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: SPSVRNTRLNPSGPHLRQDQAFP*LEPEGL Trigger: GAGGCCTTCAGGTTCCAGCCAAGGAAAAGCCTGATC...TTGCCTTAGGTGGGGGCCAGAAGGGTTGAGTCTTGTATTTCTAACACTAGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | GTGTCACCGCCTGCCACTCACCCCAGTCACGTCCATCTACTCAAACCTTGCTTCCCCACAAAAGGGGAGTaGACAGATTTATTGAATTCA | + |
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Preference number: 2 (lower is better) Translates to: VSPPATHPSHVHLLKPCFPTKGE*TDLLNS Trigger: TGAATTCAATAAATCTGTCCACTCCCCTTTTGTGGG...GAAGCAAGGTTTGAGTAGATGGACGTGACTGGGGTGAGTGGCAGGCGGTGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGAGAAAGTTTGCTTCCAATAGACTAATGGATGTGGCACTGGGCATATTACAGAGTTCTCTGCCTTaGGCAGGAGCAGCCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: GRRKFASNRLMDVALGILQSSLP*AGAAHL Trigger: CAGATGGGCTGCTCCTGCCCAAGGCAGAGAACTCTG...TAATATGCCCAGTGCCACATCCATTAGTCTATTGGAAGCAAACTTTCTCCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | TGTTTCCCAGTAACTTTGCCTTCTGTTACTGTGCTGTGGCTAACAGGCTTGAAACCAAGGGCCAAAGACTaGGCCAGAGAAAGGGATCTG | + |
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Preference number: 2 (lower is better) Translates to: CFPVTLPSVTVLWLTGLKPRAKD*ARERDL Trigger: CAGATCCCTTTCTCTGGCCCAGTCTTTGGCCCTTGG...TTTCAAGCCTGTTAGCCACAGCACAGTAACAGAAGGCAAAGTTACTGGGAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | GTGTTAAATCATAAGAGTCCAGTAGAAGAGATTCTTGTTGGCAGGAGACAGACCCCTCCAGCTCCAACCTaGCTCACAGCCATCCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: VLNHKSPVEEILVGRRQTPPAPT*LTAIPK Trigger: CTTTGGGATGGCTGTGAGCCAGGTTGGAGCTGGAGG...GGTCTGTCTCCTGCCAACAAGAATCTCTTCTACTGGACTCTTATGATTTAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR CAA 90 bp | TCCAGTAGAAGAGATTCTTGTTGGCAGGAGACAGACCAAAGAGATTaGACTTGGAACTTGGGACAAAGGTCCTGGATTAGCCAGGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: SSRRDSCWQETDQRD*TWNLGQRSWISQGH Trigger: ATGCCCCTGGCTAATCCAGGACCTTTGTCCCAAGTTCCAAGTCAAATCTCTTTGGTCTGTCTCCTGCCAACAAGAATCTCTTCTACTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR TCA 90 bp | TTCCACGGTAGGGAGAACTTGGTGGCTGGGCTATGTTGGGTTTGGGGATTTACCAGTGGACAGATTTATTaGATTCAAGCTGGGAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: FHGRENLVAGLCWVWGFTSGQIY*IQAGKG Trigger: TCCTTTCCCAGCTTGAATTCAATAAATCTGTCCACT...GGTAAATCCCCAAACCCAACATAGCCCAGCCACCAAGTTCTCCCTACCGTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | AGCTTCTCACTAACAAAGTTTAAGGCTAAGGTTCCTCAAGACTATCAAAAAGATCTGCTGTCACGCCCCTaGAGGGCCTCCTGGAAACCT | + |
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Preference number: 2 (lower is better) Translates to: SFSLTKFKAKVPQDYQKDLLSRP*RASWKP Trigger: AGGTTTCCAGGAGGCCCTCCAGGGGCGTGACAGCAG...ATCTTTTTGATAGTCTTGAGGAACCTTAGCCTTAAACTTTGTTAGTGAGAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | AGCTTCTCACTAACAAAGTTTAAGGCTAAGGTTCCTCAAGACTATCAAAAAGATGCCTGTCTCAGAGCCTaGAGCCTGGAACCTGGCGAA | + |
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Preference number: 2 (lower is better) Translates to: SFSLTKFKAKVPQDYQKDACLRA*SLEPGE Trigger: TTCGCCAGGTTCCAGGCTCCAGGCTCTGAGACAGGC...ATCTTTTTGATAGTCTTGAGGAACCTTAGCCTTAAACTTTGTTAGTGAGAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGATTCTTGTTGGCAGGAGACAGACCAAAGAGATTTGACTTGGAACTTGGGACGAGCTACCAATTCATaGGGCTGCAATTTGTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: RDSCWQETDQRDLTWNLGRATNS*GCNLFP Trigger: GGGAAACAAATTGCAGCCCCATGAATTGGTAGCTCG...TCCCAAGTTCCAAGTCAAATCTCTTTGGTCTGTCTCCTGCCAACAAGAATCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGATTCTTGTTGGCAGGAGACAGACCAAAGAGATTTGACTTGGAACTTGGGAACTAGAGGAAGGGGGTaGTGTCATATGGAATCTCAA | + |
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Preference number: 2 (lower is better) Translates to: RDSCWQETDQRDLTWNLGTRGRG*CHMESQ Trigger: TTGAGATTCCATATGACATCACCCCCTTCCTCTAGT...TCCCAAGTTCCAAGTCAAATCTCTTTGGTCTGTCTCCTGCCAACAAGAATCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR GCA 90 bp | GTGTTAAATCATAAGAGTCCAGTAGAAGAGATTCTTGTTGGCAGGAGACAGACCCATCTACTCAAACCTTaGTTCCATGTCCCGCTAACG | + |
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Preference number: 2 (lower is better) Translates to: VLNHKSPVEEILVGRRQTHLLKP*FHVPLT Trigger: CGTTAGCGGGACATGGAAGCAAGGTTTGAGTAGATG...GGTCTGTCTCCTGCCAACAAGAATCTCTTCTACTGGACTCTTATGATTTAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCTCACTAACAAAGTTTAAGGCTAAGGTTCCTCAAGACTATCAAAAAGATGAGGAAAGAGGATTCTaGGAAAGAGGCAACAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: SFSLTKFKAKVPQDYQKDEERGF*ERGNSS Trigger: ACTGCTGTTGCCTCTTTCTCAGAATCCTCTTTCCTC...ATCTTTTTGATAGTCTTGAGGAACCTTAGCCTTAAACTTTGTTAGTGAGAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR GCA 72 bp | AGGCAGAGGCCTGTAGCTACCCAGATTGGAGGTGCCTaGTGTCACGCCCCTGGAGGGCCTCCTGGAAACCTC | + |
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Preference number: 3 (lower is better) Translates to: RQRPVATQIGGA*CHAPGGPPGNL Trigger: GAGGTTTCCAGGAGGCCCTCCAGGGGCGTGACAGCAGGCACCTCCAATCTGGGTAGCTACAGGCCTCTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| 3UTR TCA 72 bp | GGACCCAACCCTGGCTGCTGCTGTGATCTAGCCCACTaGTGGCATGGTGTGGTAGCACCGGACAGCTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GPNPGCCCDLAH*WHGVVAPDSSP Trigger: TGGGGAGCTGTCCGGTGCTACCACACCATGCCATCAGTGGGCTAGATCACAGCAGCAGCCAGGGTTGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR GCA 72 bp | TGGTGGGCTGGGTCATCAGGTGCATATGGGCTGACCTaGTCCCTATCTCCTACCCCACCCGGAGCTTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: WWAGSSGAYGLT*SLSPTPPGASH Trigger: GTGAGAAGCTCCGGGTGGGGTAGGAGATAGGGAGCAGGTCAGCCCATATGCACCTGATGACCCAGCCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR TCA 72 bp | CCAAGAGCTTCCAGGACCCAACCCTGGCTGCTGCTGTaGTCTAGCCCACTGATGGCATGGTGTGGTAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: PRASRTQPWLLL*SSPLMAWCGST Trigger: GGTGCTACCACACCATGCCATCAGTGGGCTAGATCACAGCAGCAGCCAGGGTTGGGTCCTGGAAGCTCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCACCGCCTGCCACTCACCCCAGTCACGTCCATCTACTCAAACCTTGCTTCCCAGAGTTCTCTGCCTaGGGCAGGAGCAGCCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: VSPPATHPSHVHLLKPCFPEFSA*GRSSPS Trigger: AGATGGGCTGCTCCTGCCCAAGGCAGAGAACTCTGG...GAAGCAAGGTTTGAGTAGATGGACGTGACTGGGGTGAGTGGCAGGCGGTGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCTAACAGGCTTGAAAATGTCCATCAAAGGCCGGAAGAACTCCCTCGTAGGCCACCAAAGACCTGGTaGGGTGGCAGGGGGAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VANRLENVHQRPEELPRRPPKTW*GGRGRG Trigger: GCCTCTCCCCCTGCCACCCAACCAGGTCTTTGGTGG...CCTACGAGGGAGTTCTTCCGGCCTTTGATGGACATTTTCAAGCCTGTTAGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CCA 72 bp | ACAGATTTATTGAATTCAAGCTGGGAAAGGAGCACCTaGGTGGCTGGACTCTGGGCCCAGCCCCAGGCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TDLLNSSWERST*VAGLWAQPQAP Trigger: AGGGGCCTGGGGCTGGGCCCAGAGTCCAGCCACCCAGGTGCTCCTTTCCCAGCTTGAATTCAATAAATCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CCA 72 bp | ACTTTAGCTTTGGTGGGCTGGGTCATCAGGTGCATATaGGCTGACCTGCTCCCTATCTCCTACCCCACCCGG | + |
|
Preference number: 3 (lower is better) Translates to: TLALVGWVIRCI*ADLLPISYPTR Trigger: CCGGGTGGGGTAGGAGATAGGGAGCAGGTCAGCCCATATGCACCTGATGACCCAGCCCACCAAAGCTAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CCA 72 bp | AAAGAAGGGCATGCCGCCTTCACCTTTGGACTGGAGTaGGGGGAGTGGCCTTGCACAGCGAGCTACCAATTC | + |
|
Preference number: 3 (lower is better) Translates to: KEGHAAFTFGLE*GEWPCTASYQF Trigger: GAATTGGTAGCTCGCTGTGCAAGGCCACTCCCCCCACTCCAGTCCAAAGGTGAAGGCGGCATGCCCTTCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR GCA 72 bp | GCCACTCACCCCAGTCACGTCCATCTACTCAAACCTTaGTTCCATGTCCCGCTAACGGCAAGAACCAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ATHPSHVHLLKP*FHVPLTARTKG Trigger: CCCCTTGGTTCTTGCCGTTAGCGGGACATGGAAGCAAGGTTTGAGTAGATGGACGTGACTGGGGTGAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CCA 72 bp | CCCACCCCTTTACATTCCACGGTAGGGAGAACTTGGTaGCTGGGCTATGTTGGGTTTGGGGATTTACCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PTPLHSTVGRTW*LGYVGFGDLPG Trigger: CCCTGGTAAATCCCCAAACCCAACATAGCCCAGCCACCAAGTTCTCCCTACCGTGGAATGTAAAGGGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CCA 72 bp | ACAAAAGGGGAGTGGACAGATTTATTGAATTCAAGCTaGGAAAGGAGCACCTGGGTGGCTGGACTCTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TKGEWTDLLNSS*ERSTWVAGLWA Trigger: GGCCCAGAGTCCAGCCACCCAGGTGCTCCTTTCCCAGCTTGAATTCAATAAATCTGTCCACTCCCCTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CCA 72 bp | TTGTTCTTGTTCCTGCTGACTTTAGCTTTGGTGGGCTaGGTCATCAGGTGCATATGGGCTGACCTGCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LFLFLLTLALVG*VIRCIWADLLP Trigger: AGGGAGCAGGTCAGCCCATATGCACCTGATGACCCAGCCCACCAAAGCTAAAGTCAGCAGGAACAAGAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CCA 72 bp | GATAAGGGTGCCTTGTATGCACCTCCAGCTCCAACCTaGCTCACAGCCATCCCAAAGTTGTTCTTGTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: DKGALYAPPAPT*LTAIPKLFLFL Trigger: CAGGAACAAGAACAACTTTGGGATGGCTGTGAGCCAGGTTGGAGCTGGAGGTGCATACAAGGCACCCTTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CCA 72 bp | CGGTTTGGTACTACCCTGATCAGGCTTTTCCTTGGCTaGAACCTGAAGGCCTCAGAAAGGAAGAGCCATGAG | + |
|
Preference number: 3 (lower is better) Translates to: RFGTTLIRLFLG*NLKASERKSHE Trigger: CTCATGGCTCTTCCTTTCTGAGGCCTTCAGGTTCCAGCCAAGGAAAAGCCTGATCAGGGTAGTACCAAACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR TCA 72 bp | GTTTCAAAACTTTCAAGGGGAAGTGTGGCTCGGCCGTaGGACACTTACCAGGATTGCTATAGGCCCTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: VSKLSRGSVARP*DTYQDCYRPWF Trigger: GAACCAGGGCCTATAGCAATCCTGGTAAGTGTCTCACGGCCGAGCCACACTTCCCCTTGAAAGTTTTGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR TCA 72 bp | GTCCTCTCCTCCAGGCTTCCAACTAGAGGAAGGGGGTaGTGTCATATGGAATCTCAACCCCTTTGCTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: VLSSRLPTRGRG*CHMESQPLCLT Trigger: AGTCAAGCAAAGGGGTTGAGATTCCATATGACATCACCCCCTTCCTCTAGTTGGAAGCCTGGAGGAGAGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR-3UTR CAA 90 bp | ACGGTAGGGAGAACTTGGTGGCTGGGCTATGTTGGGTTTGGGGATTTACCAGGGATCCCAAAGTTGTTCTaGTTCCTGCTGACTTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TVGRTWWLGYVGFGDLPGIPKLF*FLLTLA Trigger: AGCTAAAGTCAGCAGGAACAAGAACAACTTTGGGAT...CCCTGGTAAATCCCCAAACCCAACATAGCCCAGCCACCAAGTTCTCCCTACCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR TCA 72 bp | CATTCACTCCCACAAAAGGGGAGTGGACAGATTTATTaGATTCAAGCTGGGAAAGGAGCACCTGGGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HSLPQKGSGQIY*IQAGKGAPGWL Trigger: CAGCCACCCAGGTGCTCCTTTCCCAGCTTGAATTCAATAAATCTGTCCACTCCCCTTTTGTGGGAGTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR TCA 72 bp | GGATGTGTCCCCCAAGATAGACGCAAGCCCAGACCATaGAGGATGCATCCTTGGCTGTTAAAACATTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: GCVPQDRRKPRP*RMHPWLLKHSL Trigger: GAGTGAATGTTTTAACAGCCAAGGATGCATCCTTCATGGTCTGGGCTTGCGTCTATCTTGGGGGACACATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR TCA 72 bp | GGCTGTTTAATAGTGCTTCTCGACAGCTCCCTCCCCTaGAACTCTGCAGGTCATTGCCATTTCTTCATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GCLIVLLDSSLP*NSAGHCHFFIP Trigger: TGGGATGAAGAAATGGCAATGACCTGCAGAGTTTCAGGGGAGGGAGCTGTCGAGAAGCACTATTAAACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR GCA 72 bp | GAAGACAAGAGCTTCTACAGACAGGGTCACAGCCCTTaGTTCCCTCTAAAGGCTAGTCTGAACTGGTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: EDKSFYRQGHSP*FPLKASLNWSE Trigger: TTCAGACCAGTTCAGACTAGCCTTTAGAGGGAAGCAAGGGCTGTGACCCTGTCTGTAGAAGCTCTTGTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR GCA 72 bp | AGTGGCCTTGCACAGCGAGCTACCAATTCATGGGGCTaGAATTTGTTTCCCAGTAACTTTGCCTTCTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SGLAQRATNSWG*NLFPSNFAFCY Trigger: GTAACAGAAGGCAAAGTTACTGGGAAACAAATTGCAGCCCCATGAATTGGTAGCTCGCTGTGCAAGGCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR TCA 72 bp | GAGATTCTTGTTGGCAGGAGACAGACCAAAGAGATTTaGCTTGGAACTTGGGACAAAGGTCCTGGATTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EILVGRRQTKEI*LGTWDKGPGLA Trigger: GGCTAATCCAGGACCTTTGTCCCAAGTTCCAAGTCAAATCTCTTTGGTCTGTCTCCTGCCAACAAGAATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CCA 72 bp | TGTTTCCCAGTAACTTTGCCTTCTGTTACTGTGCTGTaGCTAACAGGCTTGAAAATGTCCATCAAAGGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: CFPVTLPSVTVL*LTGLKMSIKGR Trigger: CCGGCCTTTGATGGACATTTTCAAGCCTGTTAGCCACAGCACAGTAACAGAAGGCAAAGTTACTGGGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCAACCTGGCTCACAGCCATCCCAAAGTTGTTCTTGTTCCTGCTGACTTTAATGAAGGATGCATCCTaGGCTGTTAAAACATTCACT | + |
|
Preference number: 3 (lower is better) Translates to: APTWLTAIPKLFLFLLTLMKDAS*AVKTFT Trigger: AGTGAATGTTTTAACAGCCAAGGATGCATCCTTCAT...TAAAGTCAGCAGGAACAAGAACAACTTTGGGATGGCTGTGAGCCAGGTTGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAGATTCTTGTTGGCAGGAGACAGACCAAAGAGATTTGACTTGGAACTTGGGAACAGCCATCCCAAAGTaGTTCTTGTTCCTGCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: RDSCWQETDQRDLTWNLGTAIPK*FLFLLT Trigger: AGTCAGCAGGAACAAGAACAACTTTGGGATGGCTGT...TCCCAAGTTCCAAGTCAAATCTCTTTGGTCTGTCTCCTGCCAACAAGAATCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTCATGGCTTTTGTTACTTCATAAGGGCACCTGAGTGTTTGGCACCTAGCACAACAGACCAAAGAGATTaGACTTGGAACTTGGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: CHGFCYFIRAPECLAPSTTDQRD*TWNLGQ Trigger: TTGTCCCAAGTTCCAAGTCAAATCTCTTTGGTCTGT...TGTGCTAGGTGCCAAACACTCAGGTGCCCTTATGAAGTAACAAAAGCCATGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAGATTCTTGTTGGCAGGAGACAGACCAAAGAGATTTGACTTGGAACTTGGGATTGACTTTGTGGACTTaGTTTCAAAACTTTCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RDSCWQETDQRDLTWNLGLTLWT*FQNFQG Trigger: CCCTTGAAAGTTTTGAAACAAAGTCCACAAAGTCAA...TCCCAAGTTCCAAGTCAAATCTCTTTGGTCTGTCTCCTGCCAACAAGAATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGCCATCTCCAGCAGCTGCCCAGAGTTCTCTGCCTTGGGCAGGAGCAGCCAGGGCAGACCACCTTaGCCTGCACGGGGCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPAISSSCPEFSALGRSSQGRPP*PARGLA Trigger: TGCCAAGCCCCGTGCAGGGCAAGGTGGTCTGCCCTG...GCTGCTCCTGCCCAAGGCAGAGAACTCTGGGCAGCTGCTGGAGATGGCTGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGCCATCTCCAGCAGCTGCCCAGAGTTCTCTGCCTTGGGCAGGAGCAGCGAGGGCTCCACTGCCTaGCAGGCTGCAGCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPAISSSCPEFSALGRSSEGSTA*QAAATK Trigger: CTTTGTGGCTGCAGCCTGGCAGGCAGTGGAGCCCTC...GCTGCTCCTGCCCAAGGCAGAGAACTCTGGGCAGCTGCTGGAGATGGCTGGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | AGGATGAGGCAGAGGCCTGTAGCTACCCAGATTGGAGGTGCCTGCTGTCACGCCAGGCCACTCCGTACTTaGGCTCCGACGCCAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: RMRQRPVATQIGGACCHARPLRT*APTPGW Trigger: CCATCCTGGCGTCGGAGCGCAAGTACGGAGTGGCCT...GGCGTGACAGCAGGCACCTCCAATCTGGGTAGCTACAGGCCTCTGCCTCATCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | GTGTCACCGCCTGCCACTCACCCCAGTCACGTCCATCTACTCAAACCTTGCTTCAAGGCCAGCTGCACGTaGCGCAGGCCCGAGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSPPATHPSHVHLLKPCFKASCT*RRPEVS Trigger: GGACACCTCGGGCCTGCGGCACGTGCAGCTGGCCTT...GAAGCAAGGTTTGAGTAGATGGACGTGACTGGGGTGAGTGGCAGGCGGTGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGCCATCTCCAGCAGCTGCCCAGAGTTCTCTGCCTTGGGCAGGAGCAGCGCTCCGACGCCAGGATaGCGCGCTTGTTCTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPAISSSCPEFSALGRSSAPTPG*RACSSG Trigger: TCCTGAAGAACAAGCGCGCCATCCTGGCGTCGGAGC...GCTGCTCCTGCCCAAGGCAGAGAACTCTGGGCAGCTGCTGGAGATGGCTGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGCCATCTCCAGCAGCTGCCCAGAGTTCTCTGCCTTGGGCAGGAGCAGCACGGGGACAGCTTGTTaGTCTTGCGGCAGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPAISSSCPEFSALGRSSTGTAC*SCGRWR Trigger: CCTCCACCTGCCGCAAGACCAACAAGCTGTCCCCGT...GCTGCTCCTGCCCAAGGCAGAGAACTCTGGGCAGCTGCTGGAGATGGCTGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR TCA 90 bp | GTGTCACCGCCTGCCACTCACCCCAGTCACGTCCATCTACTCAAACCTTGCTTCTGGTCTCGGTGGCGCTaGACACGTCCTGCGAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VSPPATHPSHVHLLKPCFWSRWR*TRPARR Trigger: ACGCCTCGCAGGACGTGTTCAGCGCCACCGAGACCA...GAAGCAAGGTTTGAGTAGATGGACGTGACTGGGGTGAGTGGCAGGCGGTGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CAA 72 bp | TGTCTCAGAGCCTGGAGCCTGGAACCTGGCGAAGCGTaGCTGAAAGCCCTGGGCTTCTCCAGCCATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLRAWSLEPGEA*LKALGFSSHLQ Trigger: CTGGAGATGGCTGGAGAAGCCCAGGGCTTTCAGCAACGCTTCGCCAGGTTCCAGGCTCCAGGCTCTGAGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | AGGATGAGGCAGAGGCCTGTAGCTACCCAGATTGGAGGTGCCTGCTGTCACGCCCTGGCCCTCGAGTGCTaGCATGGCCTTGAGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: RMRQRPVATQIGGACCHALALEC*HGLEQH Trigger: ATGTTGCTCAAGGCCATGGCAGCACTCGAGGGCCAG...GGCGTGACAGCAGGCACCTCCAATCTGGGTAGCTACAGGCCTCTGCCTCATCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | CTTTTCCTTGGCTGGAACCTGAAGGCCTCAGAAAGGAAGAGCCATGAGGGGAGGGCGCGATCTCGCCCTTaGGTAGGTCCGGGTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFLGWNLKASERKSHEGRARSRP*VGPGSP Trigger: AGGAGAACCCGGACCTACGCAAGGGCGAGATCGCGC...CCTCCCCTCATGGCTCTTCCTTTCTGAGGCCTTCAGGTTCCAGCCAAGGAAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR TCA 90 bp | TTCCACGGTAGGGAGAACTTGGTGGCTGGGCTATGTTGGGTTTGGGGATTTACCCCAGAGCCTGGGTGGTaGCTCCACCCTTCGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHGRENLVAGLCWVWGFTPEPGW*LHPSSW Trigger: CCAACTCGAAGGGTGGAGTCACCACCCAGGCTCTGG...GGTAAATCCCCAAACCCAACATAGCCCAGCCACCAAGTTCTCCCTACCGTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR TCA 90 bp | TACTTCATAAGGGCACCTGAGTGTTTGGCACCTAGCACACAAAAGGGGCCGTATGTGCTGCCATGGCCTTaGGCAACATCGCCTGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: YFIRAPECLAPSTQKGPYVLPWP*ATSPGG Trigger: ACCGCCAGGCGATGTTGCTCAAGGCCATGGCAGCAC...ATACGGCCCCTTTTGTGTGCTAGGTGCCAAACACTCAGGTGCCCTTATGAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | TCCCCTAGTGTTAGAAATACAAGACTCAACCCTTCTGGCCCCCACCTAAGGCAACCGGCGGCGCGGATCTaGTGGAACCAAGCGATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPSVRNTRLNPSGPHLRQPAARI*WNQAMR Trigger: TCTCATCGCTTGGTTCCAGCAGATCCGCGCCGCCGG...TTGCCTTAGGTGGGGGCCAGAAGGGTTGAGTCTTGTATTTCTAACACTAGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | GCTCCAACCTGGCTCACAGCCATCCCAAAGTTGTTCTTGTTCCTGCTGACTTTAGGGGAAGCTTCTCGCTaGCATCGGCGTTGGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: APTWLTAIPKLFLFLLTLGEASR*HRRWRT Trigger: TGTGCGCCAACGCCGATGGCAGCGAGAAGCTTCCCC...TAAAGTCAGCAGGAACAAGAACAACTTTGGGATGGCTGTGAGCCAGGTTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | GGAGTGGACAGATTTATTGAATTCAAGCTGGGAAAGGAGCACCTGGGTGGCTGGGGGGCTTGGCAGATTTaGCTGCGACCAGTGGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVDRFIEFKLGKEHLGGWGAWQI*LRPVGE Trigger: TTCCCCCACTGGTCGCAGGCAAATCTGCCAAGCCCC...CCAGCCACCCAGGTGCTCCTTTCCCAGCTTGAATTCAATAAATCTGTCCACTCC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | TGTCATGGCTTTTGTTACTTCATAAGGGCACCTGAGTGTTTGGCACCTAGCACAGTCCGAGGGCTCCACTaGCTGCCAGGCTGCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CHGFCYFIRAPECLAPSTVRGLH*LPGCSH Trigger: GTGGCTGCAGCCTGGCAGGCAGTGGAGCCCTCGGAC...TGTGCTAGGTGCCAAACACTCAGGTGCCCTTATGAAGTAACAAAAGCCATGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | ACGGTAGGGAGAACTTGGTGGCTGGGCTATGTTGGGTTTGGGGATTTACCAGGGTGGAGAGTGGGGAACTaGGCCTCTTCCTGGACACTA | + |
|
Preference number: 4 (lower is better) Translates to: TVGRTWWLGYVGFGDLPGWRVGN*ASSWTL Trigger: TAGTGTCCAGGAAGAGGCCCAGTTCCCCACTCTCCA...CCCTGGTAAATCCCCAAACCCAACATAGCCCAGCCACCAAGTTCTCCCTACCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | CTTTTCCTTGGCTGGAACCTGAAGGCCTCAGAAAGGAAGAGCCATGAGGGGAGGCCAGGAAATGGAGAGTaGGGAACTGGGCCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFLGWNLKASERKSHEGRPGNGE*GTGPLP Trigger: AGGAAGAGGCCCAGTTCCCCACTCTCCATTTCCTGG...CCTCCCCTCATGGCTCTTCCTTTCTGAGGCCTTCAGGTTCCAGCCAAGGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | GGAGTGGACAGATTTATTGAATTCAAGCTGGGAAAGGAGCACCTGGGTGGCTGGTGGCCTCCCCAAAGCTaGGCACAGGGACCTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: GVDRFIEFKLGKEHLGGWWPPQS*AQGPHH Trigger: GTGATGAGGTCCCTGTGCCCAGCTTTGGGGAGGCCA...CCAGCCACCCAGGTGCTCCTTTCCCAGCTTGAATTCAATAAATCTGTCCACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | CTTTTCCTTGGCTGGAACCTGAAGGCCTCAGAAAGGAAGAGCCATGAGGGGAGGTGGCAAAGTAAGCCATaGCCTCCCCAAAGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLGWNLKASERKSHEGRWQSKP*PPQSWA Trigger: TGCCCAGCTTTGGGGAGGCCATGGCTTACTTTGCCA...CCTCCCCTCATGGCTCTTCCTTTCTGAGGCCTTCAGGTTCCAGCCAAGGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | TTCCACGGTAGGGAGAACTTGGTGGCTGGGCTATGTTGGGTTTGGGGATTTACCGCACTCGGTCATCGATaGGGAAGGAGGTCAGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: FHGRENLVAGLCWVWGFTALGHR*GRRSGT Trigger: GGTACCTGACCTCCTTCCCCATCGATGACCGAGTGC...GGTAAATCCCCAAACCCAACATAGCCCAGCCACCAAGTTCTCCCTACCGTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGCCATCTCCAGCAGCTGCCCAGAGTTCTCTGCCTTGGGCAGGAGCAGCTTCTTCCTAGTCACGTaGACCAGATCGTGTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPAISSSCPEFSALGRSSFFLVT*TRSCSK Trigger: TTTGGAACACGATCTGGTCCACGTGACTAGGAAGAA...GCTGCTCCTGCCCAAGGCAGAGAACTCTGGGCAGCTGCTGGAGATGGCTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | TGTTTCCCAGTAACTTTGCCTTCTGTTACTGTGCTGTGGCTAACAGGCTTGAAAGGGAAGAAGGCCAGCTaGACGTGCCGCAGGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CFPVTLPSVTVLWLTGLKGKKAS*TCRRPE Trigger: CTCGGGCCTGCGGCACGTGCAGCTGGCCTTCTTCCC...TTTCAAGCCTGTTAGCCACAGCACAGTAACAGAAGGCAAAGTTACTGGGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | GTGGCTAACAGGCTTGAAAATGTCCATCAAAGGCCGGAAGAACTCCCTCGTAGGCAGAGCCCTGAGGCCTaGTCCGACAGAAAGTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VANRLENVHQRPEELPRRQSPEA*SDRKSY Trigger: GTACGACTTTCTGTCGGACCAGGCCTCAGGGCTCTG...CCTACGAGGGAGTTCTTCCGGCCTTTGATGGACATTTTCAAGCCTGTTAGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | GGAGTGGACAGATTTATTGAATTCAAGCTGGGAAAGGAGCACCTGGGTGGCTGGCCTCCTTCCAGGAAATaGAGAGTGGGGAACTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVDRFIEFKLGKEHLGGWPPSRK*RVGNWA Trigger: GGCCCAGTTCCCCACTCTCCATTTCCTGGAAGGAGG...CCAGCCACCCAGGTGCTCCTTTCCCAGCTTGAATTCAATAAATCTGTCCACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | TACTTCATAAGGGCACCTGAGTGTTTGGCACCTAGCACACAAAAGGGGCCGTATCCCGCCTGCCTGGCATaGTTCTTCCTAGTCACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YFIRAPECLAPSTQKGPYPACLA*FFLVTW Trigger: CCACGTGACTAGGAAGAACCATGCCAGGCAGGCGGG...ATACGGCCCCTTTTGTGTGCTAGGTGCCAAACACTCAGGTGCCCTTATGAAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CAA 72 bp | GCTCCAACCTGGCTCACAGCCATCCCAAAGTTGTTCTaGTTCCTGCTGACTTTAGCTTTGGTGGGCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: APTWLTAIPKLF*FLLTLALVGWV Trigger: GACCCAGCCCACCAAAGCTAAAGTCAGCAGGAACAAGAACAACTTTGGGATGGCTGTGAGCCAGGTTGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CAA 72 bp | CCTCCAGCTCCAACCTGGCTCACAGCCATCCCAAAGTaGTTCTTGTTCCTGCTGACTTTAGCTTTGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPAPTWLTAIPK*FLFLLTLALVG Trigger: GCCCACCAAAGCTAAAGTCAGCAGGAACAAGAACAACTTTGGGATGGCTGTGAGCCAGGTTGGAGCTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR TCA 90 bp | TCCCCTAGTGTTAGAAATACAAGACTCAACCCTTCTGGCCCCCACCTAAGGCAAGCTGGAACCAAGCGATaGGAAGCCCCTCCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPSVRNTRLNPSGPHLRQAGTKR*EAPPAC Trigger: ACAAGCTGGAGGGGCTTCTCATCGCTTGGTTCCAGC...TTGCCTTAGGTGGGGGCCAGAAGGGTTGAGTCTTGTATTTCTAACACTAGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR TCA 90 bp | AGAGATTCTTGTTGGCAGGAGACAGACCAAAGAGATTTGACTTGGAACTTGGGAGCCCAGTTGCAAGCCTaGGGGATCCTGGCCCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDSCWQETDQRDLTWNLGAQLQA*GILALE Trigger: CTCGAGGGCCAGGATCCCTCAGGCTTGCAACTGGGC...TCCCAAGTTCCAAGTCAAATCTCTTTGGTCTGTCTCCTGCCAACAAGAATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR TCA 90 bp | CTTTTCCTTGGCTGGAACCTGAAGGCCTCAGAAAGGAAGAGCCATGAGGGGAGGAGGTCAGGTACCTCTTaGCCATGGCAAAGTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLGWNLKASERKSHEGRRSGTS*PWQSKP Trigger: TGGCTTACTTTGCCATGGTCAAGAGGTACCTGACCT...CCTCCCCTCATGGCTCTTCCTTTCTGAGGCCTTCAGGTTCCAGCCAAGGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | TTCCACGGTAGGGAGAACTTGGTGGCTGGGCTATGTTGGGTTTGGGGATTTACCCTCACGAAAGCAAGTTaGTATGTCCGAGGGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FHGRENLVAGLCWVWGFTLTKAS*YVRGLH Trigger: GTGGAGCCCTCGGACATAGCAACTTGCTTTCGTGAG...GGTAAATCCCCAAACCCAACATAGCCCAGCCACCAAGTTCTCCCTACCGTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAGAAAGTTTGCTTCCAATAGACTAATGGATGTGGCACTGGGCATATTAGAGGTGTCCAAGGACTaGGCAGCCAGACGGCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRRKFASNRLMDVALGILEVSKD*AARRPA Trigger: GGCCGGCCGTCTGGCTGCCCAGTCCTTGGACACCTC...TAATATGCCCAGTGCCACATCCATTAGTCTATTGGAAGCAAACTTTCTCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | GCTCCAACCTGGCTCACAGCCATCCCAAAGTTGTTCTTGTTCCTGCTGACTTTACCCCAAAACCACCACTaGCTTCCACTACTCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: APTWLTAIPKLFLFLLTLPQNHH*LPLLPG Trigger: CCCAGGGAGTAGTGGAAGCCAGTGGTGGTTTTGGGG...TAAAGTCAGCAGGAACAAGAACAACTTTGGGATGGCTGTGAGCCAGGTTGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CAA 72 bp | TACTCCAGAGCAAGCCCACAGGGTAGACTAGACTTTTaGGTCCTCTCCTCCAGGCTTCCAACTAGAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSRASPQGRLDF*VLSSRLPTRGR Trigger: CCTTCCTCTAGTTGGAAGCCTGGAGGAGAGGACCAAAAAGTCTAGTCTACCCTGTGGGCTTGCTCTGGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | AGAGATTCTTGTTGGCAGGAGACAGACCAAAGAGATTTGACTTGGAACTTGGGAGCTGCAGCCACAAAGTaGAGGGCCTCCACAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RDSCWQETDQRDLTWNLGAAATK*RASTRP Trigger: GGGCCTTGTGGAGGCCCTGCACTTTGTGGCTGCAGC...TCCCAAGTTCCAAGTCAAATCTCTTTGGTCTGTCTCCTGCCAACAAGAATCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | TGTCATGGCTTTTGTTACTTCATAAGGGCACCTGAGTGTTTGGCACCTAGCACATGGTCTTGCGGCAGGTaGAGGCCACTCCGTACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CHGFCYFIRAPECLAPSTWSCGR*RPLRTC Trigger: GCAAGTACGGAGTGGCCTCCACCTGCCGCAAGACCA...TGTGCTAGGTGCCAAACACTCAGGTGCCCTTATGAAGTAACAAAAGCCATGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | TACTTCATAAGGGCACCTGAGTGTTTGGCACCTAGCACACAAAAGGGGCCGTATTGGCCCTTCACCTGTTaGACCACTCCTCGCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YFIRAPECLAPSTQKGPYWPFTC*TTPRSK Trigger: TTTGGAGCGAGGAGTGGTCCAACAGGTGAAGGGCCA...ATACGGCCCCTTTTGTGTGCTAGGTGCCAAACACTCAGGTGCCCTTATGAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR TCA 90 bp | GGAAGGAGAAAGTTTGCTTCCAATAGACTAATGGATGTGGCACTGGGCATATTACCTCCACCTCCTGGATaGTCCGCGACTTCTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRRKFASNRLMDVALGILPPPPG*SATSPG Trigger: TCCGGGAGAAGTCGCGGATCATCCAGGAGGTGGAGG...TAATATGCCCAGTGCCACATCCATTAGTCTATTGGAAGCAAACTTTCTCCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR TCA 90 bp | TGTCATGGCTTTTGTTACTTCATAAGGGCACCTGAGTGTTTGGCACCTAGCACAAGCCGTTGGAAGCAGTaGAGTCGTCCATGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CHGFCYFIRAPECLAPSTSRWKQ*SRPCPA Trigger: AGCTGGGCATGGACGACTTCACTGCTTCCAACGGCT...TGTGCTAGGTGCCAAACACTCAGGTGCCCTTATGAAGTAACAAAAGCCATGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR TCA 90 bp | GGAAGGAGAAAGTTTGCTTCCAATAGACTAATGGATGTGGCACTGGGCATATTAACCTCCCCAGAGCCCTaGGGCCTGGTCCGACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRRKFASNRLMDVALGILTSPEP*GLVRQK Trigger: TTTCTGTCGGACCAGGCCTCAGGGCTCTGGGGAGGT...TAATATGCCCAGTGCCACATCCATTAGTCTATTGGAAGCAAACTTTCTCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | AGAGATTCTTGTTGGCAGGAGACAGACCAAAGAGATTTGACTTGGAACTTGGGACCCCGAACTCCCGCCTaGCTGGCATGGTTCTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: RDSCWQETDQRDLTWNLGPRTPA*LAWFFL Trigger: TAGGAAGAACCATGCCAGGCAGGCGGGAGTTCGGGG...TCCCAAGTTCCAAGTCAAATCTCTTTGGTCTGTCTCCTGCCAACAAGAATCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | TGTCATGGCTTTTGTTACTTCATAAGGGCACCTGAGTGTTTGGCACCTAGCACACTCCACCCTTCGAGTTaGCAGTGTAGTCGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CHGFCYFIRAPECLAPSTLHPSS*QCSRRA Trigger: TGCCCTGCGACTACACTGCCAACTCGAAGGGTGGAG...TGTGCTAGGTGCCAAACACTCAGGTGCCCTTATGAAGTAACAAAAGCCATGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAGAAAGTTTGCTTCCAATAGACTAATGGATGTGGCACTGGGCATATTAGCGGCGCGGATCTGCTaGAACCAAGCGATGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRRKFASNRLMDVALGILAARIC*NQAMRS Trigger: GCTTCTCATCGCTTGGTTCCAGCAGATCCGCGCCGC...TAATATGCCCAGTGCCACATCCATTAGTCTATTGGAAGCAAACTTTCTCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | GTGTTAAATCATAAGAGTCCAGTAGAAGAGATTCTTGTTGGCAGGAGACAGACCTTTGCCTGCGACCAGTaGGGGAAGCTTCTCGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLNHKSPVEEILVGRRQTFACDQ*GKLLAA Trigger: GGCAGCGAGAAGCTTCCCCCACTGGTCGCAGGCAAA...GGTCTGTCTCCTGCCAACAAGAATCTCTTCTACTGGACTCTTATGATTTAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CAA 72 bp | ATCCCAAAGTTGTTCTTGTTCCTGCTGACTTTAGCTTaGGTGGGCTGGGTCATCAGGTGCATATGGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IPKLFLFLLTLA*VGWVIRCIWAD Trigger: GTCAGCCCATATGCACCTGATGACCCAGCCCACCAAAGCTAAAGTCAGCAGGAACAAGAACAACTTTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CAA 72 bp | TGGCAGGAGACAGACCAAAGAGATTTGACTTGGAACTaGGGACAAAGGTCCTGGATTAGCCAGGGGCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: WQETDQRDLTWN*GQRSWISQGHL Trigger: TAGATGCCCCTGGCTAATCCAGGACCTTTGTCCCAAGTTCCAAGTCAAATCTCTTTGGTCTGTCTCCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR TCA 90 bp | AGCTTCTCACTAACAAAGTTTAAGGCTAAGGTTCCTCAAGACTATCAAAAAGATTGGACGGCGGGATGTTaGAGCGCCGCGCGATCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SFSLTKFKAKVPQDYQKDWTAGC*SAARSR Trigger: GCGAGATCGCGCGGCGCTTCAACATCCCGCCGTCCA...ATCTTTTTGATAGTCTTGAGGAACCTTAGCCTTAAACTTTGTTAGTGAGAAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | GTGTTAAATCATAAGAGTCCAGTAGAAGAGATTCTTGTTGGCAGGAGACAGACCACAGCTTGTTGGTCTTaGGGCAGGTGGAGGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: VLNHKSPVEEILVGRRQTTACWS*GRWRPL Trigger: GAGTGGCCTCCACCTGCCGCAAGACCAACAAGCTGT...GGTCTGTCTCCTGCCAACAAGAATCTCTTCTACTGGACTCTTATGATTTAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | GTGTTAAATCATAAGAGTCCAGTAGAAGAGATTCTTGTTGGCAGGAGACAGACCGCTTGTTCTTCAGGATaGTGCTCAGCGTGGACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VLNHKSPVEEILVGRRQTACSSG*CSAWTA Trigger: CGCCGTCCACGCTGAGCACCATCCTGAAGAACAAGC...GGTCTGTCTCCTGCCAACAAGAATCTCTTCTACTGGACTCTTATGATTTAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR TCA 90 bp | TGTTTCCCAGTAACTTTGCCTTCTGTTACTGTGCTGTGGCTAACAGGCTTGAAACTCTTCATCACTGTCTaGGTCAGAGTCCTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFPVTLPSVTVLWLTGLKLFITV*VRVLSS Trigger: GGAGGAGAGGACTCTGACTCAGACAGTGATGAAGAG...TTTCAAGCCTGTTAGCCACAGCACAGTAACAGAAGGCAAAGTTACTGGGAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CAA 72 bp | CCAATTCATGGGGCTGCAATTTGTTTCCCAGTAACTTaGCCTTCTGTTACTGTGCTGTGGCTAACAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PIHGAAICFPVT*PSVTVLWLTGL Trigger: CAAGCCTGTTAGCCACAGCACAGTAACAGAAGGCAAAGTTACTGGGAAACAAATTGCAGCCCCATGAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| 3UTR CAA 72 bp | CTTGCACAGCGAGCTACCAATTCATGGGGCTGCAATTaGTTTCCCAGTAACTTTGCCTTCTGTTACTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LAQRATNSWGCN*FPSNFAFCYCA Trigger: AGCACAGTAACAGAAGGCAAAGTTACTGGGAAACAAATTGCAGCCCCATGAATTGGTAGCTCGCTGTGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR CCA 90 bp | AGCTTCTCACTAACAAAGTTTAAGGCTAAGGTTCCTCAAGACTATCAAAAAGATAAGCCTGAGGGATCCTaGCCCTCGAGTGCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SFSLTKFKAKVPQDYQKDKPEGS*PSSAAM Trigger: CATGGCAGCACTCGAGGGCCAGGATCCCTCAGGCTT...ATCTTTTTGATAGTCTTGAGGAACCTTAGCCTTAAACTTTGTTAGTGAGAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | AGCTTCTCACTAACAAAGTTTAAGGCTAAGGTTCCTCAAGACTATCAAAAAGATATCCTGGCCCTCGAGTaGTGCCATGGCCTTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFSLTKFKAKVPQDYQKDILALE*CHGLEQ Trigger: TTGCTCAAGGCCATGGCAGCACTCGAGGGCCAGGAT...ATCTTTTTGATAGTCTTGAGGAACCTTAGCCTTAAACTTTGTTAGTGAGAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS-3UTR GCA 90 bp | AGCTTCTCACTAACAAAGTTTAAGGCTAAGGTTCCTCAAGACTATCAAAAAGATCTTGGCAGATTTGCCTaGGACCAGTGGGGGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFSLTKFKAKVPQDYQKDLGRFA*DQWGKL Trigger: AAGCTTCCCCCACTGGTCGCAGGCAAATCTGCCAAG...ATCTTTTTGATAGTCTTGAGGAACCTTAGCCTTAAACTTTGTTAGTGAGAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS CCA 90 bp | CTTCGCGCCCGAGAACGGGTCACGCCGCTGCAGGCCACTACACCGTaGCGCCTGCGGAAGCGATCCAGCCAGCCGTTGGAAGCAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRARERVTPLQATTP*RLRKRSSQPLEAVK Trigger: CTTCACTGCTTCCAACGGCTGGCTGGATCGCTTCCGCAGGCGCCACGGTGTAGTGGCCTGCAGCGGCGTGACCCGTTCTCGGGCGCGAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS TCA 90 bp | CGATCTCGCCCTTGCGTAGGTCCGGGTTCTCCTCCACCTCCTGGATaGTCCGCGACTTCTCCCGGAACGTCAGCTGCCGCCGCTTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RSRPCVGPGSPPPPG*SATSPGTSAAAAWG Trigger: GCCCCAAGCGGCGGCAGCTGACGTTCCGGGAGAAGTCGCGGATCATCCAGGAGGTGGAGGAGAACCCGGACCTACGCAAGGGCGAGATCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS GCA 90 bp | GCAGGGCAGACCACCTTGCCCTGCACGGGGCTTGGCAGATTTGCCTaGGACCAGTGGGGGAAGCTTCTCGCTGCCATCGGCGTTGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGQTTLPCTGLGRFA*DQWGKLLAAIGVGA Trigger: TGCGCCAACGCCGATGGCAGCGAGAAGCTTCCCCCACTGGTCGCAGGCAAATCTGCCAAGCCCCGTGCAGGGCAAGGTGGTCTGCCCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS GCA 90 bp | CCTCGCTCCAAAGGATGCACGGTGCCAGGAGGGAAGAAGGCCAGCTaGACGTGCCGCAGGCCCGAGGTGTCCAAGGACTGGGCAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRSKGCTVPGGKKAS*TCRRPEVSKDWAAR Trigger: TCTGGCTGCCCAGTCCTTGGACACCTCGGGCCTGCGGCACGTGCAGCTGGCCTTCTTCCCTCCTGGCACCGTGCATCCTTTGGAGCGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS GCA 90 bp | GGCCCTTCACCTGTTGGACCACTCCTCGCTCCAAAGGATGCACGGTaGCAGGAGGGAAGAAGGCCAGCTGCACGTGCCGCAGGCCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPSPVGPLLAPKDAR*QEGRRPAARAAGPR Trigger: CCTCGGGCCTGCGGCACGTGCAGCTGGCCTTCTTCCCTCCTGGCACCGTGCATCCTTTGGAGCGAGGAGTGGTCCAACAGGTGAAGGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS CCA 90 bp | CGCGCGATCTCGCCCTTGCGTAGGTCCGGGTTCTCCTCCACCTCCTaGATGATCCGCGACTTCTCCCGGAACGTCAGCTGCCGCCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RAISPLRRSGFSSTS*MIRDFSRNVSCRRL Trigger: CAAGCGGCGGCAGCTGACGTTCCGGGAGAAGTCGCGGATCATCCAGGAGGTGGAGGAGAACCCGGACCTACGCAAGGGCGAGATCGCGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS CCA 90 bp | TGCGGCAGGTGGAGGCCACTCCGTACTTGCGCTCCGACGCCAGGATaGCGCGCTTGTTCTTCAGGATGGTGCTCAGCGTGGACGGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CGRWRPLRTCAPTPG*RACSSGWCSAWTAG Trigger: TCCCGCCGTCCACGCTGAGCACCATCCTGAAGAACAAGCGCGCCATCCTGGCGTCGGAGCGCAAGTACGGAGTGGCCTCCACCTGCCGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS CCA 90 bp | AAGAAGGCCAGCTGCACGTGCCGCAGGCCCGAGGTGTCCAAGGACTaGGCAGCCAGACGGCCGGCCAGCAGAAGGACCCGACGAGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: KKASCTCRRPEVSKD*AARRPASRRTRRDS Trigger: AGAATCTCGTCGGGTCCTTCTGCTGGCCGGCCGTCTGGCTGCCCAGTCCTTGGACACCTCGGGCCTGCGGCACGTGCAGCTGGCCTTCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS TCA 90 bp | CACCGTGGCGCCTGCGGAAGCGATCCAGCCAGCCGTTGGAAGCAGTaGAGTCGTCCATGCCCAGCTCCTCCGCTATCCGCAGCGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HRGACGSDPASRWKQ*SRPCPAPPLSAAPS Trigger: AGAAGGCGCTGCGGATAGCGGAGGAGCTGGGCATGGACGACTTCACTGCTTCCAACGGCTGGCTGGATCGCTTCCGCAGGCGCCACGGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS TCA 90 bp | CCTGGTCCGACAGAAAGTCGTACCACAGGCTGGTCTCGGTGGCGCTaGACACGTCCTGCGAGGCGTAGCCCTCAGCTACCGACGGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PGPTESRTTGWSRWR*TRPARRSPQLPTAA Trigger: AGCCGCCGTCGGTAGCTGAGGGCTACGCCTCGCAGGACGTGTTCAGCGCCACCGAGACCAGCCTGTGGTACGACTTTCTGTCGGACCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
||
| CDS GCA 90 bp | AGTCGCAGGGCAGACCACCTTGCCCTGCACGGGGCTTGGCAGATTTaGCTGCGACCAGTGGGGGAAGCTTCTCGCTGCCATCGGCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRRADHLALHGAWQI*LRPVGEASRCHRRW Trigger: CCAACGCCGATGGCAGCGAGAAGCTTCCCCCACTGGTCGCAGGCAAATCTGCCAAGCCCCGTGCAGGGCAAGGTGGTCTGCCCTGCGACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS-3UTR CAA 90 bp | AGGATGAGGCAGAGGCCTGTAGCTACCCAGATTGGAGGTGCCTGCTGTCACGCCGCAGGGCAGACCACCTaGCCCTGCACGGGGCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: RMRQRPVATQIGGACCHAAGQTT*PCTGLG Trigger: GCCAAGCCCCGTGCAGGGCAAGGTGGTCTGCCCTGC...GGCGTGACAGCAGGCACCTCCAATCTGGGTAGCTACAGGCCTCTGCCTCATCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS TCA 90 bp | CGCGCTTGTTCTTCAGGATGGTGCTCAGCGTGGACGGCGGGATGTTaGAGCGCCGCGCGATCTCGCCCTTGCGTAGGTCCGGGTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: RACSSGWCSAWTAGC*SAARSRPCVGPGSP Trigger: AGGAGAACCCGGACCTACGCAAGGGCGAGATCGCGCGGCGCTTCAACATCCCGCCGTCCACGCTGAGCACCATCCTGAAGAACAAGCGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 90 bp | TGCCAGGCTGCAGCCACAAAGTGCAGGGCCTCCACAAGGCCCAGTTaGAAGCCTGAGGGATCCTGGCCCTCGAGTGCTGCCATGGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: CQAAATKCRASTRPS*KPEGSWPSSAAMAL Trigger: CAAGGCCATGGCAGCACTCGAGGGCCAGGATCCCTCAGGCTTGCAACTGGGCCTTGTGGAGGCCCTGCACTTTGTGGCTGCAGCCTGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 90 bp | TTCAGGATGATGCCCTTGACCGGCAGCCCGGCGGCGCGGATCTGCTaGAACCAAGCGATGAGAAGCCCCTCCAGCTTGTCGTACGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: FRMMPLTGSPAARIC*NQAMRSPSSLSYGD Trigger: GTCCCCGTACGACAAGCTGGAGGGGCTTCTCATCGCTTGGTTCCAGCAGATCCGCGCCGCCGGGCTGCCGGTCAAGGGCATCATCCTGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 90 bp | AAGTGCAGGGCCTCCACAAGGCCCAGTTGCAAGCCTGAGGGATCCTaGCCCTCGAGTGCTGCCATGGCCTTGAGCAACATCGCCTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KCRASTRPSCKPEGS*PSSAAMALSNIAWR Trigger: CCGCCAGGCGATGTTGCTCAAGGCCATGGCAGCACTCGAGGGCCAGGATCCCTCAGGCTTGCAACTGGGCCTTGTGGAGGCCCTGCACTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 90 bp | GGGACAGCTTGTTGGTCTTGCGGCAGGTGGAGGCCACTCCGTACTTaGGCTCCGACGCCAGGATGGCGCGCTTGTTCTTCAGGATGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GTACWSCGRWRPLRT*APTPGWRACSSGWC Trigger: GCACCATCCTGAAGAACAAGCGCGCCATCCTGGCGTCGGAGCGCAAGTACGGAGTGGCCTCCACCTGCCGCAAGACCAACAAGCTGTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 90 bp | TCTTTCAGGATGATGCCCTTGACCGGCAGCCCGGCGGCGCGGATCTaGTGGAACCAAGCGATGAGAAGCCCCTCCAGCTTGTCGTACGGG | + |
|
Preference number: 5 (lower is better) Translates to: SFRMMPLTGSPAARI*WNQAMRSPSSLSYG Trigger: CCCGTACGACAAGCTGGAGGGGCTTCTCATCGCTTGGTTCCAGCAGATCCGCGCCGCCGGGCTGCCGGTCAAGGGCATCATCCTGAAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 90 bp | CCCGCCTCACGAAAGCAAGTTGCTATGTCCGAGGGCTCCACTGCCTaGCAGGCTGCAGCCACAAAGTGCAGGGCCTCCACAAGGCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PASRKQVAMSEGSTA*QAAATKCRASTRPS Trigger: ACTGGGCCTTGTGGAGGCCCTGCACTTTGTGGCTGCAGCCTGGCAGGCAGTGGAGCCCTCGGACATAGCAACTTGCTTTCGTGAGGCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 90 bp | TGGCAGTGTAGTCGCAGGGCAGACCACCTTGCCCTGCACGGGGCTTaGCAGATTTGCCTGCGACCAGTGGGGGAAGCTTCTCGCTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: WQCSRRADHLALHGA*QICLRPVGEASRCH Trigger: ATGGCAGCGAGAAGCTTCCCCCACTGGTCGCAGGCAAATCTGCCAAGCCCCGTGCAGGGCAAGGTGGTCTGCCCTGCGACTACACTGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS TCA 90 bp | GTTGCAAGCCTGAGGGATCCTGGCCCTCGAGTGCTGCCATGGCCTTaGGCAACATCGCCTGGCGGTAGTGGCCCTTCACCTGTTGGACCA | + |
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Preference number: 5 (lower is better) Translates to: VASLRDPGPRVLPWP*ATSPGGSGPSPVGP Trigger: TGGTCCAACAGGTGAAGGGCCACTACCGCCAGGCGATGTTGCTCAAGGCCATGGCAGCACTCGAGGGCCAGGATCCCTCAGGCTTGCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 90 bp | ACCCTTCGAGTTGGCAGTGTAGTCGCAGGGCAGACCACCTTGCCCTaGACGGGGCTTGGCAGATTTGCCTGCGACCAGTGGGGGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLRVGSVVAGQTTLP*TGLGRFACDQWGKL Trigger: AAGCTTCCCCCACTGGTCGCAGGCAAATCTGCCAAGCCCCGTGCAGGGCAAGGTGGTCTGCCCTGCGACTACACTGCCAACTCGAAGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS TCA 90 bp | TGCAGCCACAAAGTGCAGGGCCTCCACAAGGCCCAGTTGCAAGCCTaGGGGATCCTGGCCCTCGAGTGCTGCCATGGCCTTGAGCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: CSHKVQGLHKAQLQA*GILALECCHGLEQH Trigger: ATGTTGCTCAAGGCCATGGCAGCACTCGAGGGCCAGGATCCCTCAGGCTTGCAACTGGGCCTTGTGGAGGCCCTGCACTTTGTGGCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 90 bp | ACGAAAGCAAGTTGCTATGTCCGAGGGCTCCACTGCCTGCCAGGCTaGAGCCACAAAGTGCAGGGCCTCCACAAGGCCCAGTTGCAAGCC | + |
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Preference number: 5 (lower is better) Translates to: TKASCYVRGLHCLPG*SHKVQGLHKAQLQA Trigger: GGCTTGCAACTGGGCCTTGTGGAGGCCCTGCACTTTGTGGCTGCAGCCTGGCAGGCAGTGGAGCCCTCGGACATAGCAACTTGCTTTCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 90 bp | AAAACCCGCCTCACGAAAGCAAGTTGCTATGTCCGAGGGCTCCACTaGCTGCCAGGCTGCAGCCACAAAGTGCAGGGCCTCCACAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KTRLTKASCYVRGLH*LPGCSHKVQGLHKA Trigger: GGCCTTGTGGAGGCCCTGCACTTTGTGGCTGCAGCCTGGCAGGCAGTGGAGCCCTCGGACATAGCAACTTGCTTTCGTGAGGCGGGTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS-3UTR CAA 90 bp | GTGTCACCGCCTGCCACTCACCCCAGTCACGTCCATCTACTCAAACCTTGCTTCCGGGGCTTGGCAGATTaGCCTGCGACCAGTGGGGGA | + |
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Preference number: 5 (lower is better) Translates to: VSPPATHPSHVHLLKPCFRGLAD*PATSGG Trigger: TCCCCCACTGGTCGCAGGCAAATCTGCCAAGCCCCG...GAAGCAAGGTTTGAGTAGATGGACGTGACTGGGGTGAGTGGCAGGCGGTGACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 90 bp | GGCAGCCAGACGGCCGGCCAGCAGAAGGACCCGACGAGATTCTGCTaGCATTCGAGTGTCCAGAGCTTTCAAGTACTTAGCCAGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSQTAGQQKDPTRFC*HSSVQSFQVLSQSL Trigger: CAGGCTCTGGCTAAGTACTTGAAAGCTCTGGACACTCGAATGGCAGCAGAATCTCGTCGGGTCCTTCTGCTGGCCGGCCGTCTGGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 90 bp | CTGGGCAGCCAGACGGCCGGCCAGCAGAAGGACCCGACGAGATTCTaGTGCCATTCGAGTGTCCAGAGCTTTCAAGTACTTAGCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGSQTAGQQKDPTRF*CHSSVQSFQVLSQS Trigger: GCTCTGGCTAAGTACTTGAAAGCTCTGGACACTCGAATGGCAGCAGAATCTCGTCGGGTCCTTCTGCTGGCCGGCCGTCTGGCTGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS-3UTR CAA 90 bp | GTGTCACCGCCTGCCACTCACCCCAGTCACGTCCATCTACTCAAACCTTGCTTCTCGTACGGGGACAGCTaGTTGGTCTTGCGGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VSPPATHPSHVHLLKPCFSYGDS*LVLRQV Trigger: CACCTGCCGCAAGACCAACAAGCTGTCCCCGTACGA...GAAGCAAGGTTTGAGTAGATGGACGTGACTGGGGTGAGTGGCAGGCGGTGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS TCA 90 bp | GACTCTGCACTCGGTCATCGATGGGGAAGGAGGTCAGGTACCTCTTaGCCATGGCAAAGTAAGCCATGGCCTCCCCAAAGCTGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: DSALGHRWGRRSGTS*PWQSKPWPPQSWAQ Trigger: CTGTGCCCAGCTTTGGGGAGGCCATGGCTTACTTTGCCATGGTCAAGAGGTACCTGACCTCCTTCCCCATCGATGACCGAGTGCAGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS-3UTR CAA 90 bp | GTGGCTAACAGGCTTGAAAATGTCCATCAAAGGCCGGAAGAACTCCCTCGTAGGGAGGCCACTCCGTACTaGCGCTCCGACGCCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VANRLENVHQRPEELPRREATPY*RSDARM Trigger: CATCCTGGCGTCGGAGCGCAAGTACGGAGTGGCCTC...CCTACGAGGGAGTTCTTCCGGCCTTTGATGGACATTTTCAAGCCTGTTAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS-3UTR CAA 90 bp | TACTTCATAAGGGCACCTGAGTGTTTGGCACCTAGCACACAAAAGGGGCCGTATTTCAGGATGATGCCCTaGACCGGCAGCCCGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: YFIRAPECLAPSTQKGPYFRMMP*TGSPAA Trigger: CGCCGCCGGGCTGCCGGTCAAGGGCATCATCCTGAA...ATACGGCCCCTTTTGTGTGCTAGGTGCCAAACACTCAGGTGCCCTTATGAAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS-3UTR CAA 90 bp | GTGGCTAACAGGCTTGAAAATGTCCATCAAAGGCCGGAAGAACTCCCTCGTAGGTGCCCTGCACGGGGCTaGGCAGATTTGCCTGCGACC | + |
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Preference number: 5 (lower is better) Translates to: VANRLENVHQRPEELPRRCPARG*ADLPAT Trigger: GGTCGCAGGCAAATCTGCCAAGCCCCGTGCAGGGCA...CCTACGAGGGAGTTCTTCCGGCCTTTGATGGACATTTTCAAGCCTGTTAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 90 bp | GGAACTGGGCCTCTTCCTGGACACTATAACCCCCAAAACCACCACTaGCTTCCACTACTCCCTGGGCCCAGTCTTCAGCCTCTAAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: GTGPLPGHYNPQNHH*LPLLPGPSLQPLNP Trigger: AGGGTTTAGAGGCTGAAGACTGGGCCCAGGGAGTAGTGGAAGCCAGTGGTGGTTTTGGGGGTTATAGTGTCCAGGAAGAGGCCCAGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS-3UTR CAA 90 bp | GTGGCTAACAGGCTTGAAAATGTCCATCAAAGGCCGGAAGAACTCCCTCGTAGGCGATCCAGCCAGCCGTaGGAAGCAGTGAAGTCGTCC | + |
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Preference number: 5 (lower is better) Translates to: VANRLENVHQRPEELPRRRSSQP*EAVKSS Trigger: GGACGACTTCACTGCTTCCAACGGCTGGCTGGATCG...CCTACGAGGGAGTTCTTCCGGCCTTTGATGGACATTTTCAAGCCTGTTAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS-3UTR CAA 90 bp | GGAGTGGACAGATTTATTGAATTCAAGCTGGGAAAGGAGCACCTGGGTGGCTGGGTGGCCCTTCACCTGTaGGACCACTCCTCGCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: GVDRFIEFKLGKEHLGGWVALHL*DHSSLQ Trigger: TTGGAGCGAGGAGTGGTCCAACAGGTGAAGGGCCAC...CCAGCCACCCAGGTGCTCCTTTCCCAGCTTGAATTCAATAAATCTGTCCACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 90 bp | CACTGTCTGAGTCAGAGTCCTCTCCTCCTTCCAGGAAATGGAGAGTaGGGAACTGGGCCTCTTCCTGGACACTATAACCCCCAAAACCAC | + |
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Preference number: 5 (lower is better) Translates to: HCLSQSPLLLPGNGE*GTGPLPGHYNPQNH Trigger: GTGGTTTTGGGGGTTATAGTGTCCAGGAAGAGGCCCAGTTCCCCACTCTCCATTTCCTGGAAGGAGGAGAGGACTCTGACTCAGACAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS-3UTR CAA 90 bp | AGAGATTCTTGTTGGCAGGAGACAGACCAAAGAGATTTGACTTGGAACTTGGGACGCGCGATCTCGCCCTaGCGTAGGTCCGGGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RDSCWQETDQRDLTWNLGRAISP*RRSGFS Trigger: GGAGAACCCGGACCTACGCAAGGGCGAGATCGCGCG...TCCCAAGTTCCAAGTCAAATCTCTTTGGTCTGTCTCCTGCCAACAAGAATCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS-3UTR CAA 90 bp | TGTTTCCCAGTAACTTTGCCTTCTGTTACTGTGCTGTGGCTAACAGGCTTGAAAGTGGACGGCGGGATGTaGAAGCGCCGCGCGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CFPVTLPSVTVLWLTGLKVDGGM*KRRAIS Trigger: CGAGATCGCGCGGCGCTTCAACATCCCGCCGTCCAC...TTTCAAGCCTGTTAGCCACAGCACAGTAACAGAAGGCAAAGTTACTGGGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS-3UTR CAA 90 bp | TCCCCTAGTGTTAGAAATACAAGACTCAACCCTTCTGGCCCCCACCTAAGGCAAGACAGCTTGTTGGTCTaGCGGCAGGTGGAGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SPSVRNTRLNPSGPHLRQDSLLV*RQVEAT Trigger: AGTGGCCTCCACCTGCCGCAAGACCAACAAGCTGTC...TTGCCTTAGGTGGGGGCCAGAAGGGTTGAGTCTTGTATTTCTAACACTAGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS-3UTR CAA 90 bp | TGTCATGGCTTTTGTTACTTCATAAGGGCACCTGAGTGTTTGGCACCTAGCACAGCCAGGATGGCGCGCTaGTTCTTCAGGATGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CHGFCYFIRAPECLAPSTARMAR*FFRMVL Trigger: GAGCACCATCCTGAAGAACAAGCGCGCCATCCTGGC...TGTGCTAGGTGCCAAACACTCAGGTGCCCTTATGAAGTAACAAAAGCCATGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS-3UTR CAA 90 bp | GGAAGGAGAAAGTTTGCTTCCAATAGACTAATGGATGTGGCACTGGGCATATTATACGGGGACAGCTTGTaGGTCTTGCGGCAGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRRKFASNRLMDVALGILYGDSL*VLRQVE Trigger: CTCCACCTGCCGCAAGACCAACAAGCTGTCCCCGTA...TAATATGCCCAGTGCCACATCCATTAGTCTATTGGAAGCAAACTTTCTCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS-3UTR CAA 90 bp | TCCCCTAGTGTTAGAAATACAAGACTCAACCCTTCTGGCCCCCACCTAAGGCAATCCTCTCCCTCACTCTaGAAGGAAGTGGTGATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSVRNTRLNPSGPHLRQSSPSL*KEVVIV Trigger: CACTATCACCACTTCCTTCAAGAGTGAGGGAGAGGA...TTGCCTTAGGTGGGGGCCAGAAGGGTTGAGTCTTGTATTTCTAACACTAGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS-3UTR CAA 90 bp | AGAGATTCTTGTTGGCAGGAGACAGACCAAAGAGATTTGACTTGGAACTTGGGACCTCACGAAAGCAAGTaGCTATGTCCGAGGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RDSCWQETDQRDLTWNLGPHESK*LCPRAP Trigger: TGGAGCCCTCGGACATAGCAACTTGCTTTCGTGAGG...TCCCAAGTTCCAAGTCAAATCTCTTTGGTCTGTCTCCTGCCAACAAGAATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 72 bp | TGTGCTCCCACCGCTGCCCTCGGAGGGCACCGTGGCTaGGCCGGCAGGTGCCGCTGGGGCCCGAGGGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CAPTAALGGHRG*AGRCRWGPRGR Trigger: TCTGCCCCTCGGGCCCCAGCGGCACCTGCCGGCCCAGCCACGGTGCCCTCCGAGGGCAGCGGTGGGAGCACA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 72 bp | ACGGCGGCTGCTCCTCCCTCGTGTGCCAGCCGGGTGTaGTCCCACCGCTGCCCTCGGAGGGCACCGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TAAAPPSCASRV*SHRCPRRAPWL Trigger: CAGCCACGGTGCCCTCCGAGGGCAGCGGTGGGAGCACACCCGGCTGGCACACGAGGGAGGAGCAGCCGCCGT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 72 bp | CCCTCAGCTACCGACGGCGGCTGCTCCTCCCTCGTGTaGCAGCCGGGTGTGCTCCCACCGCTGCCCTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSATDGGCSSLV*QPGVLPPLPSE Trigger: CTCCGAGGGCAGCGGTGGGAGCACACCCGGCTGGCACACGAGGGAGGAGCAGCCGCCGTCGGTAGCTGAGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 72 bp | AGCTGCACGTGCCGCAGGCCCGAGGTGTCCAAGGACTaGGCAGCCAGACGGCCGGCCAGCAGAAGGACCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SCTCRRPEVSKD*AARRPASRRTR Trigger: TCGGGTCCTTCTGCTGGCCGGCCGTCTGGCTGCCCAGTCCTTGGACACCTCGGGCCTGCGGCACGTGCAGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 72 bp | CCATCGGCGTTGGCGCACAGCAAAACGCTAAGGCGCTaGGTGGCCTGGCGCGCCGGTCCATCACCTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSALAHSKTLRR*VAWRAGPSPPQ Trigger: CTGGGGAGGTGATGGACCGGCGCGCCAGGCCACCCAGCGCCTTAGCGTTTTGCTGTGCGCCAACGCCGATGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 72 bp | CGAGAACGGGTCACGCCGCTGCAGGCCACTACACCGTaGCGCCTGCGGAAGCGATCCAGCCAGCCGTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RERVTPLQATTP*RLRKRSSQPLE Trigger: TTCCAACGGCTGGCTGGATCGCTTCCGCAGGCGCCACGGTGTAGTGGCCTGCAGCGGCGTGACCCGTTCTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 72 bp | TTGGCGCACAGCAAAACGCTAAGGCGCTGGGTGGCCTaGCGCGCCGGTCCATCACCTCCCCAGAGCCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LAHSKTLRRWVA*RAGPSPPQSPE Trigger: CTCAGGGCTCTGGGGAGGTGATGGACCGGCGCGCCAGGCCACCCAGCGCCTTAGCGTTTTGCTGTGCGCCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 90 bp | CTCAGCGTGGACGGCGGGATGTTGAAGCGCCGCGCGATCTCGCCCTaGCGTAGGTCCGGGTTCTCCTCCACCTCCTGGATGATCCGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: LSVDGGMLKRRAISP*RRSGFSSTSWMIRD Trigger: GTCGCGGATCATCCAGGAGGTGGAGGAGAACCCGGACCTACGCAAGGGCGAGATCGCGCGGCGCTTCAACATCCCGCCGTCCACGCTGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 90 bp | GATTTGCCTGCGACCAGTGGGGGAAGCTTCTCGCTGCCATCGGCGTaGGCGCACAGCAAAACGCTAAGGCGCTGGGTGGCCTGGCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: DLPATSGGSFSLPSA*AHSKTLRRWVAWRA Trigger: GGCGCGCCAGGCCACCCAGCGCCTTAGCGTTTTGCTGTGCGCCAACGCCGATGGCAGCGAGAAGCTTCCCCCACTGGTCGCAGGCAAATC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS TCA 72 bp | GCAGCCCGGCGGCGCGGATCTGCTGGAACCAAGCGATaGGAAGCCCCTCCAGCTTGTCGTACGGGGACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AARRRGSAGTKR*EAPPACRTGTA Trigger: AGCTGTCCCCGTACGACAAGCTGGAGGGGCTTCTCATCGCTTGGTTCCAGCAGATCCGCGCCGCCGGGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 72 bp | ATGCCCTTGACCGGCAGCCCGGCGGCGCGGATCTGCTaGAACCAAGCGATGAGAAGCCCCTCCAGCTTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: MPLTGSPAARIC*NQAMRSPSSLS Trigger: CGACAAGCTGGAGGGGCTTCTCATCGCTTGGTTCCAGCAGATCCGCGCCGCCGGGCTGCCGGTCAAGGGCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 72 bp | CGCGCCGGTCCATCACCTCCCCAGAGCCCTGAGGCCTaGTCCGACAGAAAGTCGTACCACAGGCTGGTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RAGPSPPQSPEA*SDRKSYHRLVS Trigger: CGAGACCAGCCTGTGGTACGACTTTCTGTCGGACCAGGCCTCAGGGCTCTGGGGAGGTGATGGACCGGCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 72 bp | CCCTGCACGGGGCTTGGCAGATTTGCCTGCGACCAGTaGGGGAAGCTTCTCGCTGCCATCGGCGTTGGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PCTGLGRFACDQ*GKLLAAIGVGA Trigger: TGCGCCAACGCCGATGGCAGCGAGAAGCTTCCCCCACTGGTCGCAGGCAAATCTGCCAAGCCCCGTGCAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 72 bp | GACGGCGGGATGTTGAAGCGCCGCGCGATCTCGCCCTaGCGTAGGTCCGGGTTCTCCTCCACCTCCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: DGGMLKRRAISP*RRSGFSSTSWM Trigger: CATCCAGGAGGTGGAGGAGAACCCGGACCTACGCAAGGGCGAGATCGCGCGGCGCTTCAACATCCCGCCGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 72 bp | GCGACCAGTGGGGGAAGCTTCTCGCTGCCATCGGCGTaGGCGCACAGCAAAACGCTAAGGCGCTGGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ATSGGSFSLPSA*AHSKTLRRWVA Trigger: GGCCACCCAGCGCCTTAGCGTTTTGCTGTGCGCCAACGCCGATGGCAGCGAGAAGCTTCCCCCACTGGTCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 90 bp | GCGCGCTTGTTCTTCAGGATGGTGCTCAGCGTGGACGGCGGGATGTaGAAGCGCCGCGCGATCTCGCCCTTGCGTAGGTCCGGGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ARLFFRMVLSVDGGM*KRRAISPLRRSGFS Trigger: GGAGAACCCGGACCTACGCAAGGGCGAGATCGCGCGGCGCTTCAACATCCCGCCGTCCACGCTGAGCACCATCCTGAAGAACAAGCGCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 90 bp | CAGGCCACTACACCGTGGCGCCTGCGGAAGCGATCCAGCCAGCCGTaGGAAGCAGTGAAGTCGTCCATGCCCAGCTCCTCCGCTATCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QATTPWRLRKRSSQP*EAVKSSMPSSSAIR Trigger: GCGGATAGCGGAGGAGCTGGGCATGGACGACTTCACTGCTTCCAACGGCTGGCTGGATCGCTTCCGCAGGCGCCACGGTGTAGTGGCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS TCA 72 bp | CCTTGCGTAGGTCCGGGTTCTCCTCCACCTCCTGGATaGTCCGCGACTTCTCCCGGAACGTCAGCTGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PCVGPGSPPPPG*SATSPGTSAAA Trigger: GGCGGCAGCTGACGTTCCGGGAGAAGTCGCGGATCATCCAGGAGGTGGAGGAGAACCCGGACCTACGCAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS TCA 72 bp | TCTTCAGGATGGTGCTCAGCGTGGACGGCGGGATGTTaGAGCGCCGCGCGATCTCGCCCTTGCGTAGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SSGWCSAWTAGC*SAARSRPCVGP Trigger: CGGACCTACGCAAGGGCGAGATCGCGCGGCGCTTCAACATCCCGCCGTCCACGCTGAGCACCATCCTGAAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 72 bp | ATGATGCCCTTGACCGGCAGCCCGGCGGCGCGGATCTaGTGGAACCAAGCGATGAGAAGCCCCTCCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: MMPLTGSPAARI*WNQAMRSPSSL Trigger: CAAGCTGGAGGGGCTTCTCATCGCTTGGTTCCAGCAGATCCGCGCCGCCGGGCTGCCGGTCAAGGGCATCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 72 bp | ACCACCTTGCCCTGCACGGGGCTTGGCAGATTTGCCTaGGACCAGTGGGGGAAGCTTCTCGCTGCCATCGGC | + |
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Preference number: 6 (lower is better) Translates to: TTLPCTGLGRFA*DQWGKLLAAIG Trigger: GCCGATGGCAGCGAGAAGCTTCCCCCACTGGTCGCAGGCAAATCTGCCAAGCCCCGTGCAGGGCAAGGTGGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 72 bp | GCAGCCACAAAGTGCAGGGCCTCCACAAGGCCCAGTTaGAAGCCTGAGGGATCCTGGCCCTCGAGTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: AATKCRASTRPS*KPEGSWPSSAA Trigger: GGCAGCACTCGAGGGCCAGGATCCCTCAGGCTTGCAACTGGGCCTTGTGGAGGCCCTGCACTTTGTGGCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 72 bp | ACTCCGTACTTGCGCTCCGACGCCAGGATGGCGCGCTaGTTCTTCAGGATGGTGCTCAGCGTGGACGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: TPYLRSDARMAR*FFRMVLSVDGG Trigger: CCCGCCGTCCACGCTGAGCACCATCCTGAAGAACAAGCGCGCCATCCTGGCGTCGGAGCGCAAGTACGGAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 72 bp | ACACCGTGGCGCCTGCGGAAGCGATCCAGCCAGCCGTaGGAAGCAGTGAAGTCGTCCATGCCCAGCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TPWRLRKRSSQP*EAVKSSMPSSS Trigger: GGAGGAGCTGGGCATGGACGACTTCACTGCTTCCAACGGCTGGCTGGATCGCTTCCGCAGGCGCCACGGTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 72 bp | GGCAGACCACCTTGCCCTGCACGGGGCTTGGCAGATTaGCCTGCGACCAGTGGGGGAAGCTTCTCGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GRPPCPARGLAD*PATSGGSFSLP Trigger: TGGCAGCGAGAAGCTTCCCCCACTGGTCGCAGGCAAATCTGCCAAGCCCCGTGCAGGGCAAGGTGGTCTGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 90 bp | GCGGCGCGGATCTGCTGGAACCAAGCGATGAGAAGCCCCTCCAGCTaGTCGTACGGGGACAGCTTGTTGGTCTTGCGGCAGGTGGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AARICWNQAMRSPSS*SYGDSLLVLRQVEA Trigger: GGCCTCCACCTGCCGCAAGACCAACAAGCTGTCCCCGTACGACAAGCTGGAGGGGCTTCTCATCGCTTGGTTCCAGCAGATCCGCGCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 90 bp | AGCTCCTCCGCTATCCGCAGCGCCTTCTCTTTCAGGATGATGCCCTaGACCGGCAGCCCGGCGGCGCGGATCTGCTGGAACCAAGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: SSSAIRSAFSFRMMP*TGSPAARICWNQAM Trigger: CATCGCTTGGTTCCAGCAGATCCGCGCCGCCGGGCTGCCGGTCAAGGGCATCATCCTGAAAGAGAAGGCGCTGCGGATAGCGGAGGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 90 bp | GACTCCACCCTTCGAGTTGGCAGTGTAGTCGCAGGGCAGACCACCTaGCCCTGCACGGGGCTTGGCAGATTTGCCTGCGACCAGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: DSTLRVGSVVAGQTT*PCTGLGRFACDQWG Trigger: CCCCCACTGGTCGCAGGCAAATCTGCCAAGCCCCGTGCAGGGCAAGGTGGTCTGCCCTGCGACTACACTGCCAACTCGAAGGGTGGAGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS TCA 72 bp | GCCTGCGGAAGCGATCCAGCCAGCCGTTGGAAGCAGTaGAGTCGTCCATGCCCAGCTCCTCCGCTATCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: ACGSDPASRWKQ*SRPCPAPPLSA Trigger: TGCGGATAGCGGAGGAGCTGGGCATGGACGACTTCACTGCTTCCAACGGCTGGCTGGATCGCTTCCGCAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS TCA 72 bp | CTGAGGGATCCTGGCCCTCGAGTGCTGCCATGGCCTTaGGCAACATCGCCTGGCGGTAGTGGCCCTTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: LRDPGPRVLPWP*ATSPGGSGPSP Trigger: AGGTGAAGGGCCACTACCGCCAGGCGATGTTGCTCAAGGCCATGGCAGCACTCGAGGGCCAGGATCCCTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 72 bp | CCTCCAGCTTGTCGTACGGGGACAGCTTGTTGGTCTTaGGGCAGGTGGAGGCCACTCCGTACTTGCGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PPACRTGTACWS*GRWRPLRTCAP Trigger: CGGAGCGCAAGTACGGAGTGGCCTCCACCTGCCGCAAGACCAACAAGCTGTCCCCGTACGACAAGCTGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 72 bp | GCAGACCACCTTGCCCTGCACGGGGCTTGGCAGATTTaGCTGCGACCAGTGGGGGAAGCTTCTCGCTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ADHLALHGAWQI*LRPVGEASRCH Trigger: ATGGCAGCGAGAAGCTTCCCCCACTGGTCGCAGGCAAATCTGCCAAGCCCCGTGCAGGGCAAGGTGGTCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 72 bp | GTTGGCAGTGTAGTCGCAGGGCAGACCACCTTGCCCTaGACGGGGCTTGGCAGATTTGCCTGCGACCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VGSVVAGQTTLP*TGLGRFACDQW Trigger: CCACTGGTCGCAGGCAAATCTGCCAAGCCCCGTGCAGGGCAAGGTGGTCTGCCCTGCGACTACACTGCCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 72 bp | TGGAGGCCACTCCGTACTTGCGCTCCGACGCCAGGATaGCGCGCTTGTTCTTCAGGATGGTGCTCAGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WRPLRTCAPTPG*RACSSGWCSAW Trigger: CCACGCTGAGCACCATCCTGAAGAACAAGCGCGCCATCCTGGCGTCGGAGCGCAAGTACGGAGTGGCCTCCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 72 bp | AGTCGCAGGGCAGACCACCTTGCCCTGCACGGGGCTTaGCAGATTTGCCTGCGACCAGTGGGGGAAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRRADHLALHGA*QICLRPVGEAS Trigger: AGAAGCTTCCCCCACTGGTCGCAGGCAAATCTGCCAAGCCCCGTGCAGGGCAAGGTGGTCTGCCCTGCGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 72 bp | TTCTTCAGGATGGTGCTCAGCGTGGACGGCGGGATGTaGAAGCGCCGCGCGATCTCGCCCTTGCGTAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FFRMVLSVDGGM*KRRAISPLRRS Trigger: GGACCTACGCAAGGGCGAGATCGCGCGGCGCTTCAACATCCCGCCGTCCACGCTGAGCACCATCCTGAAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 72 bp | CCCTCCAGCTTGTCGTACGGGGACAGCTTGTTGGTCTaGCGGCAGGTGGAGGCCACTCCGTACTTGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSSLSYGDSLLV*RQVEATPYLRS Trigger: GGAGCGCAAGTACGGAGTGGCCTCCACCTGCCGCAAGACCAACAAGCTGTCCCCGTACGACAAGCTGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 90 bp | GTGGAGGCCACTCCGTACTTGCGCTCCGACGCCAGGATGGCGCGCTaGTTCTTCAGGATGGTGCTCAGCGTGGACGGCGGGATGTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VEATPYLRSDARMAR*FFRMVLSVDGGMLK Trigger: CTTCAACATCCCGCCGTCCACGCTGAGCACCATCCTGAAGAACAAGCGCGCCATCCTGGCGTCGGAGCGCAAGTACGGAGTGGCCTCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 90 bp | GGGGACAGCTTGTTGGTCTTGCGGCAGGTGGAGGCCACTCCGTACTaGCGCTCCGACGCCAGGATGGCGCGCTTGTTCTTCAGGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GDSLLVLRQVEATPY*RSDARMARLFFRMV Trigger: CACCATCCTGAAGAACAAGCGCGCCATCCTGGCGTCGGAGCGCAAGTACGGAGTGGCCTCCACCTGCCGCAAGACCAACAAGCTGTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 90 bp | ATGAGAAGCCCCTCCAGCTTGTCGTACGGGGACAGCTTGTTGGTCTaGCGGCAGGTGGAGGCCACTCCGTACTTGCGCTCCGACGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: MRSPSSLSYGDSLLV*RQVEATPYLRSDAR Trigger: CCTGGCGTCGGAGCGCAAGTACGGAGTGGCCTCCACCTGCCGCAAGACCAACAAGCTGTCCCCGTACGACAAGCTGGAGGGGCTTCTCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 90 bp | CAAGCGATGAGAAGCCCCTCCAGCTTGTCGTACGGGGACAGCTTGTaGGTCTTGCGGCAGGTGGAGGCCACTCCGTACTTGCGCTCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: QAMRSPSSLSYGDSL*VLRQVEATPYLRSD Trigger: GTCGGAGCGCAAGTACGGAGTGGCCTCCACCTGCCGCAAGACCAACAAGCTGTCCCCGTACGACAAGCTGGAGGGGCTTCTCATCGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS TCA 72 bp | ACAGAAAGTCGTACCACAGGCTGGTCTCGGTGGCGCTaGACACGTCCTGCGAGGCGTAGCCCTCAGCTACCG | + |
|
Preference number: 6 (lower is better) Translates to: TESRTTGWSRWR*TRPARRSPQLP Trigger: CGGTAGCTGAGGGCTACGCCTCGCAGGACGTGTTCAGCGCCACCGAGACCAGCCTGTGGTACGACTTTCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS TCA 72 bp | AAAGTGCAGGGCCTCCACAAGGCCCAGTTGCAAGCCTaGGGGATCCTGGCCCTCGAGTGCTGCCATGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: KVQGLHKAQLQA*GILALECCHGL Trigger: AAGGCCATGGCAGCACTCGAGGGCCAGGATCCCTCAGGCTTGCAACTGGGCCTTGTGGAGGCCCTGCACTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 72 bp | TGTTGGTCTTGCGGCAGGTGGAGGCCACTCCGTACTTaGGCTCCGACGCCAGGATGGCGCGCTTGTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CWSCGRWRPLRT*APTPGWRACSS Trigger: TGAAGAACAAGCGCGCCATCCTGGCGTCGGAGCGCAAGTACGGAGTGGCCTCCACCTGCCGCAAGACCAACA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 72 bp | CCCTTCACCTGTTGGACCACTCCTCGCTCCAAAGGATaGACGGTGCCAGGAGGGAAGAAGGCCAGCTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: PFTCWTTPRSKG*TVPGGKKASCT Trigger: CGTGCAGCTGGCCTTCTTCCCTCCTGGCACCGTGCATCCTTTGGAGCGAGGAGTGGTCCAACAGGTGAAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 72 bp | GAAGCCCCTCCAGCTTGTCGTACGGGGACAGCTTGTTaGTCTTGCGGCAGGTGGAGGCCACTCCGTACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: EAPPACRTGTAC*SCGRWRPLRTC Trigger: GCAAGTACGGAGTGGCCTCCACCTGCCGCAAGACCAACAAGCTGTCCCCGTACGACAAGCTGGAGGGGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CCA 72 bp | GCCTCCACAAGGCCCAGTTGCAAGCCTGAGGGATCCTaGCCCTCGAGTGCTGCCATGGCCTTGAGCAACATC | + |
|
Preference number: 6 (lower is better) Translates to: ASTRPSCKPEGS*PSSAAMALSNI Trigger: GATGTTGCTCAAGGCCATGGCAGCACTCGAGGGCCAGGATCCCTCAGGCTTGCAACTGGGCCTTGTGGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 72 bp | TTGTTGGTCTTGCGGCAGGTGGAGGCCACTCCGTACTaGCGCTCCGACGCCAGGATGGCGCGCTTGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLVLRQVEATPY*RSDARMARLFF Trigger: GAAGAACAAGCGCGCCATCCTGGCGTCGGAGCGCAAGTACGGAGTGGCCTCCACCTGCCGCAAGACCAACAA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 72 bp | CTTCGAGTTGGCAGTGTAGTCGCAGGGCAGACCACCTaGCCCTGCACGGGGCTTGGCAGATTTGCCTGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: LRVGSVVAGQTT*PCTGLGRFACD Trigger: GTCGCAGGCAAATCTGCCAAGCCCCGTGCAGGGCAAGGTGGTCTGCCCTGCGACTACACTGCCAACTCGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 72 bp | GAGCAACATCGCCTGGCGGTAGTGGCCCTTCACCTGTaGGACCACTCCTCGCTCCAAAGGATGCACGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: EQHRLAVVALHL*DHSSLQRMHGA Trigger: GGCACCGTGCATCCTTTGGAGCGAGGAGTGGTCCAACAGGTGAAGGGCCACTACCGCCAGGCGATGTTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 90 bp | AACCAAGCGATGAGAAGCCCCTCCAGCTTGTCGTACGGGGACAGCTaGTTGGTCTTGCGGCAGGTGGAGGCCACTCCGTACTTGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NQAMRSPSSLSYGDS*LVLRQVEATPYLRS Trigger: GGAGCGCAAGTACGGAGTGGCCTCCACCTGCCGCAAGACCAACAAGCTGTCCCCGTACGACAAGCTGGAGGGGCTTCTCATCGCTTGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 90 bp | CATGGCCTTGAGCAACATCGCCTGGCGGTAGTGGCCCTTCACCTGTaGGACCACTCCTCGCTCCAAAGGATGCACGGTGCCAGGAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HGLEQHRLAVVALHL*DHSSLQRMHGARRE Trigger: TTCCCTCCTGGCACCGTGCATCCTTTGGAGCGAGGAGTGGTCCAACAGGTGAAGGGCCACTACCGCCAGGCGATGTTGCTCAAGGCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 72 bp | CGAAAGCAAGTTGCTATGTCCGAGGGCTCCACTGCCTaGCAGGCTGCAGCCACAAAGTGCAGGGCCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RKQVAMSEGSTA*QAAATKCRAST Trigger: TGTGGAGGCCCTGCACTTTGTGGCTGCAGCCTGGCAGGCAGTGGAGCCCTCGGACATAGCAACTTGCTTTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 72 bp | AAGGCCACCTCCAAAACCCGCCTCACGAAAGCAAGTTaGTATGTCCGAGGGCTCCACTGCCTGCCAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KATSKTRLTKAS*YVRGLHCLPGC Trigger: GCAGCCTGGCAGGCAGTGGAGCCCTCGGACATAGCAACTTGCTTTCGTGAGGCGGGTTTTGGAGGTGGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 72 bp | AGAAGCCCCTCCAGCTTGTCGTACGGGGACAGCTTGTaGGTCTTGCGGCAGGTGGAGGCCACTCCGTACTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSPSSLSYGDSL*VLRQVEATPYL Trigger: CAAGTACGGAGTGGCCTCCACCTGCCGCAAGACCAACAAGCTGTCCCCGTACGACAAGCTGGAGGGGCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 72 bp | ATGAGAAGCCCCTCCAGCTTGTCGTACGGGGACAGCTaGTTGGTCTTGCGGCAGGTGGAGGCCACTCCGTAC | + |
|
Preference number: 6 (lower is better) Translates to: MRSPSSLSYGDS*LVLRQVEATPY Trigger: GTACGGAGTGGCCTCCACCTGCCGCAAGACCAACAAGCTGTCCCCGTACGACAAGCTGGAGGGGCTTCTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 72 bp | ATCTGCTGGAACCAAGCGATGAGAAGCCCCTCCAGCTaGTCGTACGGGGACAGCTTGTTGGTCTTGCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ICWNQAMRSPSS*SYGDSLLVLRQ Trigger: CTGCCGCAAGACCAACAAGCTGTCCCCGTACGACAAGCTGGAGGGGCTTCTCATCGCTTGGTTCCAGCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 72 bp | ACGGCCGGCCAGCAGAAGGACCCGACGAGATTCTGCTaGCATTCGAGTGTCCAGAGCTTTCAAGTACTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: TAGQQKDPTRFC*HSSVQSFQVLS Trigger: GCTAAGTACTTGAAAGCTCTGGACACTCGAATGGCAGCAGAATCTCGTCGGGTCCTTCTGCTGGCCGGCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS GCA 72 bp | CAGACGGCCGGCCAGCAGAAGGACCCGACGAGATTCTaGTGCCATTCGAGTGTCCAGAGCTTTCAAGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: QTAGQQKDPTRF*CHSSVQSFQVL Trigger: AAGTACTTGAAAGCTCTGGACACTCGAATGGCAGCAGAATCTCGTCGGGTCCTTCTGCTGGCCGGCCGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 72 bp | TCCTCCTCCTCTTCCTCCTCTTCCTCTCCCTCACTCTaGAAGGAAGTGGTGATAGTGGCATTAAGGCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSSSSPSL*KEVVIVALRPP Trigger: AGGTGGCCTTAATGCCACTATCACCACTTCCTTCAAGAGTGAGGGAGAGGAAGAGGAGGAAGAGGAGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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| CDS CAA 90 bp | TCCTCTTCTTCCTCCTCCTCTTCCTCCTCTTCCTCTCCCTCACTCTaGAAGGAAGTGGTGATAGTGGCATTAAGGCCACCTCCAAAACCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSSSSSSSPSL*KEVVIVALRPPPKP Trigger: GGGTTTTGGAGGTGGCCTTAATGCCACTATCACCACTTCCTTCAAGAGTGAGGGAGAGGAAGAGGAGGAAGAGGAGGAGGAAGAAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089510.5 |
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