Pregenerated sensors for CEND1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060240Ensembl transcript IDs: ENSMUST00000084436.10, ENSMUST00000124444.2, ENSMUST00000137488.2, ENSMUST00000164387.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAGGCTTTCAGAACCACCCCCTCCCCGGAACAATTGGCTGCTCTaGGCAGGAAGTAAGGTGGTCCTAGCCTCCGGTGCTCTCCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: ARLSEPPPPRNNWLL*AGSKVVLASGALLG Trigger: CCCCAGGAGAGCACCGGAGGCTAGGACCACCTTACTTCCTGCCCAGAGCAGCCAATTGTTCCGGGGAGGGGGTGGTTCTGAAAGCCTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR CCA 90 bp | TGCCTCCCTGCCAGGCTTTCAGAACCACCCCCTCCCCGGAACAATTaGCTGCTCTGGGCAGGAAGTAAGGTGGTCCTAGCCTCCGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: CLPARLSEPPPPRNN*LLWAGSKVVLASGA Trigger: AGCACCGGAGGCTAGGACCACCTTACTTCCTGCCCAGAGCAGCCAATTGTTCCGGGGAGGGGGTGGTTCTGAAAGCCTGGCAGGGAGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR GCA 90 bp | CCACCCACCCTTAGGTCAGTCCCCCGGCATCAGGCCCAGACAGACTaGTCCTGGCTGCTCAAAAGACAAGTGAGAGGAGTAAGACAGCCA | + |
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Preference number: 1 (lower is better) Translates to: PPTLRSVPRHQAQTD*SWLLKRQVRGVRQP Trigger: TGGCTGTCTTACTCCTCTCACTTGTCTTTTGAGCAGCCAGGAGCAGTCTGTCTGGGCCTGATGCCGGGGGACTGACCTAAGGGTGGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR GCA 90 bp | GAATATTGGGCAGGCAGAACTGTAGTGTGGCTCCTTCGTGCTTCCTaGCTCCCTGCCAGGCTTTCAGAACCACCCCCTCCCCGGAACAAT | + |
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Preference number: 1 (lower is better) Translates to: EYWAGRTVVWLLRAS*LPARLSEPPPPRNN Trigger: ATTGTTCCGGGGAGGGGGTGGTTCTGAAAGCCTGGCAGGGAGGCAGGAAGCACGAAGGAGCCACACTACAGTTCTGCCTGCCCAATATTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR CCA 90 bp | ATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTaGCCAGGTGAGGGCAATGTTTCCTTAGAGCCCACTGCAGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: ISNSVSTPAQGPRRH*PGEGNVSLEPTAVF Trigger: GAAAACTGCAGTGGGCTCTAAGGAAACATTGCCCTCACCTGGCCAGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR CCA 90 bp | TCCTGCCCCAGAACTTGGGAGAGGGTGTGCTGGGGTGAGTGGAGGTaGGCTCACTGTCTATTTCTTTCCTGCTGCACGGATGTATGTAGC | + |
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Preference number: 1 (lower is better) Translates to: SCPRTWERVCWGEWR*AHCLFLSCCTDVCS Trigger: GCTACATACATCCGTGCAGCAGGAAAGAAATAGACAGTGAGCCCACCTCCACTCACCCCAGCACACCCTCTCCCAAGTTCTGGGGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR GCA 90 bp | TCCATCACTTATCTTTCAGAGACCACACCCAGCATCTCTCCCCTTTaGCCCACGCTAGTGCTTCCTGCAAACTGCAGAGCTGGGCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: SITYLSETTPSISPL*PTLVLPANCRAGLL Trigger: CAGGAGCCCAGCTCTGCAGTTTGCAGGAAGCACTAGCGTGGGGCAAAGGGGAGAGATGCTGGGTGTGGTCTCTGAAAGATAAGTGATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR TCA 90 bp | AGATGCACTAAAGAGGGGCTGCACAGCAGGTCTTCCTGCAGGCAGTaGGCGATTGCCACTCACCGGGCAGTTCTACTCTACCTGTGTTAT | + |
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Preference number: 1 (lower is better) Translates to: RCTKEGLHSRSSCRQ*AIATHRAVLLYLCY Trigger: ATAACACAGGTAGAGTAGAACTGCCCGGTGAGTGGCAATCGCTCACTGCCTGCAGGAAGACCTGCTGTGCAGCCCCTCTTTAGTGCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR CCA 90 bp | AGGAAGGACAGTATTGGGGAATATTGGGCAGGCAGAACTGTAGTGTaGCTCCTTCGTGCTTCCTGCCTCCCTGCCAGGCTTTCAGAACCA | + |
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Preference number: 1 (lower is better) Translates to: RKDSIGEYWAGRTVV*LLRASCLPARLSEP Trigger: TGGTTCTGAAAGCCTGGCAGGGAGGCAGGAAGCACGAAGGAGCCACACTACAGTTCTGCCTGCCCAATATTCCCCAATACTGTCCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCGTGCTTCCTGCCTCCCTGCCAGGCTTTCAGAACCACCCCCTCCCCGGAACACTTGGGAGAGGGTGTaGTGGGGTGAGTGGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LRASCLPARLSEPPPPRNTWERV*WGEWRW Trigger: CCACCTCCACTCACCCCAGCACACCCTCTCCCAAGT...GTTCCGGGGAGGGGGTGGTTCTGAAAGCCTGGCAGGGAGGCAGGAAGCACGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTGGCCAGGTGGTGCTTCCTGCAAACTaGAGAGCTGGGCTCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: FQTQSPLRPKVPAATGQVVLPAN*RAGLLP Trigger: GGGCAGGAGCCCAGCTCTGCAGTTTGCAGGAAGCAC...CACCTGGCCAGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCACCCTTAGGTCAGTCCCCCGGCATCAGGCCCAGACAGACTGCTCCTGGCGGTCTGTACAGAAAGTaGCTCTGTGCCCCGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: HPPLGQSPGIRPRQTAPGGLYRK*LCAPTW Trigger: CCAGGTCGGGGCACAGAGCCACTTTCTGTACAGACC...GCCAGGAGCAGTCTGTCTGGGCCTGATGCCGGGGGACTGACCTAAGGGTGGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCCACCCACCCTTAGGTCAGTCCCCCGGCATCAGGCCCAGACAGACTGCTCCCACGCTAGTGCTTCCTaGAAACTGCAGAGCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: FPPTLRSVPRHQAQTDCSHASAS*KLQSWA Trigger: AGCCCAGCTCTGCAGTTTGCAGGAAGCACTAGCGTG...GGAGCAGTCTGTCTGGGCCTGATGCCGGGGGACTGACCTAAGGGTGGGTGGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164387.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCCACCCACCCTTAGGTCAGTCCCCCGGCATCAGGCCCAGACAGACTGCTCCTGCAAACTGCAGAGCTaGGCTCCTGCCCCAGAACTT | + |
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Preference number: 2 (lower is better) Translates to: IPPTLRSVPRHQAQTDCSCKLQS*APAPEL Trigger: AAGTTCTGGGGCAGGAGCCCAGCTCTGCAGTTTGCA...GGAGCAGTCTGTCTGGGCCTGATGCCGGGGGACTGACCTAAGGGTGGGTGGGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCTGCCAGGCTTTCAGAACCACCCCCTCCCCGGAACAATTGGCTGCTCTGCACGCTAGTGCTTCCTaGAAACTGCAGAGCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: PPCQAFRTTPSPEQLAALHASAS*KLQSWA Trigger: AGCCCAGCTCTGCAGTTTGCAGGAAGCACTAGCGTG...CAGAGCAGCCAATTGTTCCGGGGAGGGGGTGGTTCTGAAAGCCTGGCAGGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR-3UTR CCA 90 bp | CGGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTGGGGTCTGTACAGAAAGTaGCTCTGTGCCCCGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: RFISNSVSTPAQGPRRHWGLYRK*LCAPTW Trigger: CCAGGTCGGGGCACAGAGCCACTTTCTGTACAGACC...CCAGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGGCATACACTGACAGAGGGAAGAGGTGGGAACCCCATCCCAAACTCAGCTCCTGCCCCAGAACTTaGGAGAGGGTGTGCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: PGAYTDRGKRWEPHPKLSSCPRT*ERVCWG Trigger: ACCCCAGCACACCCTCTCCCAAGTTCTGGGGCAGGA...GCTGAGTTTGGGATGGGGTTCCCACCTCTTCCCTCTGTCAGTGTATGCCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTGGCCCCTCCCCGGAACAATTaGCTGCTCTGGGCAGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: VYFKLSLHSGPRSPPPLAPPRNN*LLWAGS Trigger: ACTTCCTGCCCAGAGCAGCCAATTGTTCCGGGGAGG...GGCCAGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCCCACTGCAGTTTTCCGGAAAGCTGCTCACTGTCACCACACCAAGGGGCAAGTGCTTCCTGCAAACTaGAGAGCTGGGCTCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: EPTAVFRKAAHCHHTKGQVLPAN*RAGLLP Trigger: GGGCAGGAGCCCAGCTCTGCAGTTTGCAGGAAGCAC...TTGCCCCTTGGTGTGGTGACAGTGAGCAGCTTTCCGGAAAACTGCAGTGGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTGGCCAGGCCCAGACAGACTaGTCCTGGCTGCTCAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: GLFQTQSPLRPKVPAATGQAQTD*SWLLKR Trigger: TCTTTTGAGCAGCCAGGAGCAGTCTGTCTGGGCCTG...GCCAGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGCCAGATGCACTAAAGAGGGGCTGCACAGCAGGTCTTCCCACCCACCCTTACAGGCCCAGACAGACTaGTCCTGGCTGCTCAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: GARCTKEGLHSRSSHPPLQAQTD*SWLLKR Trigger: TCTTTTGAGCAGCCAGGAGCAGTCTGTCTGGGCCTG...TAAGGGTGGGTGGGAAGACCTGCTGTGCAGCCCCTCTTTAGTGCATCTGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164387.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTAGGTCAGTCCCCCGGCATCAGGCCCAGACAGACTGCTCCTGGCTGCTCATGGGGTGAGTGGAGGTaGGCTCACTGTCTATTTCTT | + |
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Preference number: 2 (lower is better) Translates to: PLGQSPGIRPRQTAPGCSWGEWR*AHCLFL Trigger: AAGAAATAGACAGTGAGCCCACCTCCACTCACCCCA...TGAGCAGCCAGGAGCAGTCTGTCTGGGCCTGATGCCGGGGGACTGACCTAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR-3UTR GCA 90 bp | CGCACTCCATCACTTATCTTTCAGAGACCACACCCAGCATCTCTCCCCTTTGCCGCAGAGCTGGGCTCCTaGCCCAGAACTTGGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: RTPSLIFQRPHPASLPFAAELGS*PRTWER Trigger: CCTCTCCCAAGTTCTGGGGCAGGAGCCCAGCTCTGC...GGCAAAGGGGAGAGATGCTGGGTGTGGTCTCTGAAAGATAAGTGATGGAGTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR-3UTR GCA 90 bp | AATTGGCTGCTCTGGGCAGGAAGTAAGGTGGTCCTAGCCTCCGGTGCTCTCCTGCACGCTAGTGCTTCCTaGAAACTGCAGAGCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: NWLLWAGSKVVLASGALLHASAS*KLQSWA Trigger: AGCCCAGCTCTGCAGTTTGCAGGAAGCACTAGCGTG...CAGGAGAGCACCGGAGGCTAGGACCACCTTACTTCCTGCCCAGAGCAGCCAATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGTTGGGTGCAGGCAGGAAGGACAGTATTGGGGAATATTGGGCAGGCAGAACGGTCCTAGCCTCCGGTaGTCTCCTGGGGCATACACT | + |
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Preference number: 2 (lower is better) Translates to: GVGCRQEGQYWGILGRQNGPSLR*SPGAYT Trigger: AGTGTATGCCCCAGGAGAGCACCGGAGGCTAGGACC...GTTCTGCCTGCCCAATATTCCCCAATACTGTCCTTCCTGCCTGCACCCAACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGGCATACACTGACAGAGGGAAGAGGTGGGAACCCCATCCCAAACTCAGCCCAGGACAGGGACAATaGGTAGAGGTAGCTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: PGAYTDRGKRWEPHPKLSPGQGQ*VEVALQ Trigger: CTGCAGAGCTACCTCTACCCATTGTCCCTGTCCTGG...GCTGAGTTTGGGATGGGGTTCCCACCTCTTCCCTCTGTCAGTGTATGCCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTCCTTAGAGCCCACTGCAGTTTTCCGGAAAGCTGCTCACTGTCACCACACCACTTGGGAGAGGGTGTaGTGGGGTGAGTGGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: VSLEPTAVFRKAAHCHHTTWERV*WGEWRW Trigger: CCACCTCCACTCACCCCAGCACACCCTCTCCCAAGT...GGTGTGGTGACAGTGAGCAGCTTTCCGGAAAACTGCAGTGGGCTCTAAGGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTAGAGCCCACTGCAGTTTTCCGGAAAGCTGCTCACTGTCACCACACCAAGCAGAGCTGGGCTCCTaGCCCAGAACTTGGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: FLRAHCSFPESCSLSPHQAELGS*PRTWER Trigger: CCTCTCCCAAGTTCTGGGGCAGGAGCCCAGCTCTGC...TTGGTGTGGTGACAGTGAGCAGCTTTCCGGAAAACTGCAGTGGGCTCTAAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR-3UTR GCA 90 bp | CCAACCAGGACAGGGACAATGGGTAGAGGTAGCTCTGCAGATTTGAATCCCACCGTGCTTCCTGCAAACTaGAGAGCTGGGCTCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: PTRTGTMGRGSSADLNPTVLPAN*RAGLLP Trigger: GGGCAGGAGCCCAGCTCTGCAGTTTGCAGGAAGCAC...GGTGGGATTCAAATCTGCAGAGCTACCTCTACCCATTGTCCCTGTCCTGGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR-3UTR GCA 90 bp | AACGGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTCAGGCCCAGACAGACTaGTCCTGGCTGCTCAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: NGLFQTQSPLRPKVPAATQAQTD*SWLLKR Trigger: TCTTTTGAGCAGCCAGGAGCAGTCTGTCTGGGCCTG...AGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCCACTGCAGTTTTCCGGAAAGCTGCTCACTGTCACCACACCAAGGGGCAATGCAAACTGCAGAGCTaGGCTCCTGCCCCAGAACTT | + |
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Preference number: 2 (lower is better) Translates to: EPTAVFRKAAHCHHTKGQCKLQS*APAPEL Trigger: AAGTTCTGGGGCAGGAGCCCAGCTCTGCAGTTTGCA...TTGCCCCTTGGTGTGGTGACAGTGAGCAGCTTTCCGGAAAACTGCAGTGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR-3UTR CCA 90 bp | GTAACGGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACCAGGACAGGGACAATaGGTAGAGGTAGCTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: VTVYFKLSLHSGPRSPPPPGQGQ*VEVALQ Trigger: CTGCAGAGCTACCTCTACCCATTGTCCCTGTCCTGG...TGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACCGTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR CAA 90 bp | CTCCATCACTTATCTTTCAGAGACCACACCCAGCATCTCTCCCCTTaGCCCCACGCTAGTGCTTCCTGCAAACTGCAGAGCTGGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LHHLSFRDHTQHLSP*PHASASCKLQSWAP Trigger: AGGAGCCCAGCTCTGCAGTTTGCAGGAAGCACTAGCGTGGGGCAAAGGGGAGAGATGCTGGGTGTGGTCTCTGAAAGATAAGTGATGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR-3UTR CCA 90 bp | CCAACCAGGACAGGGACAATGGGTAGAGGTAGCTCTGCAGATTTGAATCCCACCGGTCTGTACAGAAAGTaGCTCTGTGCCCCGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: PTRTGTMGRGSSADLNPTGLYRK*LCAPTW Trigger: CCAGGTCGGGGCACAGAGCCACTTTCTGTACAGACC...GGTGGGATTCAAATCTGCAGAGCTACCTCTACCCATTGTCCCTGTCCTGGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR-3UTR CCA 90 bp | CGGAACAATTGGCTGCTCTGGGCAGGAAGTAAGGTGGTCCTAGCCTCCGGTGCTCAGACAGACTGCTCCTaGCTGCTCAAAAGACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: RNNWLLWAGSKVVLASGAQTDCS*LLKRQV Trigger: CACTTGTCTTTTGAGCAGCCAGGAGCAGTCTGTCTG...AGCACCGGAGGCTAGGACCACCTTACTTCCTGCCCAGAGCAGCCAATTGTTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCCACCCACCCTTAGGTCAGTCCCCCGGCATCAGGCCCAGACAGACTGCTCCCTATTTCTTTCCTGCTaGACGGATGTATGTAGCATA | + |
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Preference number: 2 (lower is better) Translates to: IPPTLRSVPRHQAQTDCSLFLSC*TDVCSI Trigger: TATGCTACATACATCCGTGCAGCAGGAAAGAAATAG...GGAGCAGTCTGTCTGGGCCTGATGCCGGGGGACTGACCTAAGGGTGGGTGGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGCGCACTCCATCACTTATCTTTCAGAGACCACACCCAGCATCTCTCCCCTTGTGTGCTGGGGTGAGTaGAGGTGGGCTCACTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: LAHSITYLSETTPSISPLVCWGE*RWAHCL Trigger: TAGACAGTGAGCCCACCTCCACTCACCCCAGCACAC...AAGGGGAGAGATGCTGGGTGTGGTCTCTGAAAGATAAGTGATGGAGTGCGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGGACAGTATTGGGGAATATTGGGCAGGCAGAACTGTAGTGTGGCTCCTTCGGTGTGCTGGGGTGAGTaGAGGTGGGCTCACTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: EGQYWGILGRQNCSVAPSVCWGE*RWAHCL Trigger: TAGACAGTGAGCCCACCTCCACTCACCCCAGCACAC...CGAAGGAGCCACACTACAGTTCTGCCTGCCCAATATTCCCCAATACTGTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR-3UTR CCA 90 bp | AGACTGCTCCTGGCTGCTCAAAAGACAAGTGAGAGGAGTAAGACAGCCATGCCCTGCAAACTGCAGAGCTaGGCTCCTGCCCCAGAACTT | + |
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Preference number: 2 (lower is better) Translates to: RLLLAAQKTSERSKTAMPCKLQS*APAPEL Trigger: AAGTTCTGGGGCAGGAGCCCAGCTCTGCAGTTTGCA...GGGCATGGCTGTCTTACTCCTCTCACTTGTCTTTTGAGCAGCCAGGAGCAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCCACTGCAGTTTTCCGGAAAGCTGCTCACTGTCACCACACCAAGGGGCAACAGACAGACTGCTCCTaGCTGCTCAAAAGACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: EPTAVFRKAAHCHHTKGQQTDCS*LLKRQV Trigger: CACTTGTCTTTTGAGCAGCCAGGAGCAGTCTGTCTG...TTGCCCCTTGGTGTGGTGACAGTGAGCAGCTTTCCGGAAAACTGCAGTGGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR CAA 90 bp | CTAAAGAGGGGCTGCACAGCAGGTCTTCCTGCAGGCAGTGAGCGATaGCCACTCACCGGGCAGTTCTACTCTACCTGTGTTATTGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: LKRGCTAGLPAGSER*PLTGQFYSTCVIAF Trigger: AAATGCAATAACACAGGTAGAGTAGAACTGCCCGGTGAGTGGCAATCGCTCACTGCCTGCAGGAAGACCTGCTGTGCAGCCCCTCTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTGTTAACTTTGCCTTTTCCATCCAACCAGGACAGGGACAATGGGTAGAGGTAGTGCTTCCTGCAAACTaGAGAGCTGGGCTCCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: AVNFAFSIQPGQGQWVEVVLPAN*RAGLLP Trigger: GGGCAGGAGCCCAGCTCTGCAGTTTGCAGGAAGCAC...TACCTCTACCCATTGTCCCTGTCCTGGTTGGATGGAAAAGGCAAAGTTAACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTGGCTGCTCAAAAGACAAGTGAGAGGAGTAAGACAGCCATGCCCTTTAATTCCTGCCCCAGAACTTaGGAGAGGGTGTGCTGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: LLAAQKTSERSKTAMPFNSCPRT*ERVCWG Trigger: ACCCCAGCACACCCTCTCCCAAGTTCTGGGGCAGGA...ATTAAAGGGCATGGCTGTCTTACTCCTCTCACTTGTCTTTTGAGCAGCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| 3UTR-3UTR CCA 90 bp | AGACTGCTCCTGGCTGCTCAAAAGACAAGTGAGAGGAGTAAGACAGCCATGCCCTGGGGTGAGTGGAGGTaGGCTCACTGTCTATTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: RLLLAAQKTSERSKTAMPWGEWR*AHCLFL Trigger: AAGAAATAGACAGTGAGCCCACCTCCACTCACCCCA...GGGCATGGCTGTCTTACTCCTCTCACTTGTCTTTTGAGCAGCCAGGAGCAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTTCCCACCCACCCTTAGGTCAGTCCCCCGGCATCAGGCCCAGACAGACTGCTAAATATCTAGGACCTTaGATGCACTATATATTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SSHPPLGQSPGIRPRQTAKYLGP*MHYIFR Trigger: CCTGAATATATAGTGCATGCAAGGTCCTAGATATTT...AGCAGTCTGTCTGGGCCTGATGCCGGGGGACTGACCTAAGGGTGGGTGGGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164387.2 |
||
| 3UTR-3UTR GCA 90 bp | AACGGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTTGTCTATTTCTTTCCTaGTGCACGGATGTATGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: NGLFQTQSPLRPKVPAATCLFLS*CTDVCS Trigger: GCTACATACATCCGTGCAGCAGGAAAGAAATAGACA...AGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| 3UTR-3UTR GCA 90 bp | CGCACTCCATCACTTATCTTTCAGAGACCACACCCAGCATCTCTCCCCTTTGCCTGTCTATTTCTTTCCTaGTGCACGGATGTATGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: RTPSLIFQRPHPASLPFACLFLS*CTDVCS Trigger: GCTACATACATCCGTGCAGCAGGAAAGAAATAGACA...GGCAAAGGGGAGAGATGCTGGGTGTGGTCTCTGAAAGATAAGTGATGGAGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| 3UTR-3UTR CCA 90 bp | CACTCACCGGGCAGTTCTACTCTACCTGTGTTATTGCATTTATACGCTGTTAAAGACAGAGGGAAGAGGTaGGAACCCCATCCCAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: HSPGSSTLPVLLHLYAVKDRGKR*EPHPKL Trigger: GAGTTTGGGATGGGGTTCCCACCTCTTCCCTCTGTC...TTTAACAGCGTATAAATGCAATAACACAGGTAGAGTAGAACTGCCCGGTGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| 3UTR-3UTR GCA 90 bp | GCGCACTCCATCACTTATCTTTCAGAGACCACACCCAGCATCTCTCCCCTTTGCAAATATCTAGGACCTTaGATGCACTATATATTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: AHSITYLSETTPSISPLCKYLGP*MHYIFR Trigger: CCTGAATATATAGTGCATGCAAGGTCCTAGATATTT...GCAAAGGGGAGAGATGCTGGGTGTGGTCTCTGAAAGATAAGTGATGGAGTGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| 3UTR-3UTR GCA 90 bp | AGACTGCTCCTGGCTGCTCAAAAGACAAGTGAGAGGAGTAAGACAGCCATGCCCAAATATCTAGGACCTTaGATGCACTATATATTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RLLLAAQKTSERSKTAMPKYLGP*MHYIFR Trigger: CCTGAATATATAGTGCATGCAAGGTCCTAGATATTT...GGGCATGGCTGTCTTACTCCTCTCACTTGTCTTTTGAGCAGCCAGGAGCAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTCAAAAGACAAGTGAGAGGAGTAAGACAGCCATGCCCTTTAATGTCCCCACAAAATATCTAGGACCTTaGATGCACTATATATTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: AQKTSERSKTAMPFNVPTKYLGP*MHYIFR Trigger: CCTGAATATATAGTGCATGCAAGGTCCTAGATATTT...TGTGGGGACATTAAAGGGCATGGCTGTCTTACTCCTCTCACTTGTCTTTTGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| 3UTR-3UTR GCA 90 bp | CACTCACCGGGCAGTTCTACTCTACCTGTGTTATTGCATTTATACGCTGTTAAATGTCTATTTCTTTCCTaGTGCACGGATGTATGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: HSPGSSTLPVLLHLYAVKCLFLS*CTDVCS Trigger: GCTACATACATCCGTGCAGCAGGAAAGAAATAGACA...TTTAACAGCGTATAAATGCAATAACACAGGTAGAGTAGAACTGCCCGGTGAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCCACCCTTAGGTCAGTCCCCCGGCATCAGGCCCAGACAGACTGCTCCTGGCCTCCTGCCCCAGAACTaGGGAGAGGGTGTGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: HPPLGQSPGIRPRQTAPGLLPQN*GEGVLG Trigger: CCCCAGCACACCCTCTCCCAAGTTCTGGGGCAGGAG...GCCAGGAGCAGTCTGTCTGGGCCTGATGCCGGGGGACTGACCTAAGGGTGGGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| 3UTR CCA 72 bp | TCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTaGCCAGGTGAGGGCAATGTTTCCTTAGAGCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: SVSTPAQGPRRH*PGEGNVSLEPT Trigger: AGTGGGCTCTAAGGAAACATTGCCCTCACCTGGCCAGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| 3UTR GCA 72 bp | GCAGGCAGAACTGTAGTGTGGCTCCTTCGTGCTTCCTaGCTCCCTGCCAGGCTTTCAGAACCACCCCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: AGRTVVWLLRAS*LPARLSEPPPP Trigger: GGGAGGGGGTGGTTCTGAAAGCCTGGCAGGGAGGCAGGAAGCACGAAGGAGCCACACTACAGTTCTGCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| 3UTR CCA 72 bp | TTGCCCCACGCTAGTGCTTCCTGCAAACTGCAGAGCTaGGCTCCTGCCCCAGAACTTGGGAGAGGGTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LPHASASCKLQS*APAPELGRGCA Trigger: AGCACACCCTCTCCCAAGTTCTGGGGCAGGAGCCCAGCTCTGCAGTTTGCAGGAAGCACTAGCGTGGGGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| 3UTR CCA 72 bp | GCCAGGCTTTCAGAACCACCCCCTCCCCGGAACAATTaGCTGCTCTGGGCAGGAAGTAAGGTGGTCCTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ARLSEPPPPRNN*LLWAGSKVVLA Trigger: GGCTAGGACCACCTTACTTCCTGCCCAGAGCAGCCAATTGTTCCGGGGAGGGGGTGGTTCTGAAAGCCTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| 3UTR GCA 72 bp | AACTGTAGTGTGGCTCCTTCGTGCTTCCTGCCTCCCTaGCAGGCTTTCAGAACCACCCCCTCCCCGGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: NCSVAPSCFLPP*QAFRTTPSPEQ Trigger: TTGTTCCGGGGAGGGGGTGGTTCTGAAAGCCTGGCAGGGAGGCAGGAAGCACGAAGGAGCCACACTACAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAAGCTGGGGCCAGATGCACTAAAGAGGGGCTGCACAGCAGGTCTTCCTGCCAGTATTGGGGAATATaGGGCAGGCAGAACTGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: GQAGARCTKEGLHSRSSCQYWGI*GRQNCS Trigger: ACTACAGTTCTGCCTGCCCAATATTCCCCAATACTG...GCAGGAAGACCTGCTGTGCAGCCCCTCTTTAGTGCATCTGGCCCCAGCTTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| 3UTR TCA 72 bp | GGACAGGGACAATGGGTAGAGGTAGCTCTGCAGATTTaGATCCCACCCACCCTTAGGTCAGTCCCCCGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GQGQWVEVALQI*IPPTLRSVPRH Trigger: ATGCCGGGGGACTGACCTAAGGGTGGGTGGGATTCAAATCTGCAGAGCTACCTCTACCCATTGTCCCTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| 3UTR GCA 72 bp | ATATTGGGCAGGCAGAACTGTAGTGTGGCTCCTTCGTaGTTCCTGCCTCCCTGCCAGGCTTTCAGAACCACC | + |
|
Preference number: 3 (lower is better) Translates to: ILGRQNCSVAPS*FLPPCQAFRTT Trigger: GGTGGTTCTGAAAGCCTGGCAGGGAGGCAGGAAGCACGAAGGAGCCACACTACAGTTCTGCCTGCCCAATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| 3UTR GCA 72 bp | GCTGCACAGCAGGTCTTCCTGCAGGCAGTGAGCGATTaGCACTCACCGGGCAGTTCTACTCTACCTGTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: AAQQVFLQAVSD*HSPGSSTLPVL Trigger: TAACACAGGTAGAGTAGAACTGCCCGGTGAGTGGCAATCGCTCACTGCCTGCAGGAAGACCTGCTGTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| 3UTR CCA 72 bp | TCAGTCCCCCGGCATCAGGCCCAGACAGACTGCTCCTaGCTGCTCAAAAGACAAGTGAGAGGAGTAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: SVPRHQAQTDCS*LLKRQVRGVRQ Trigger: CTGTCTTACTCCTCTCACTTGTCTTTTGAGCAGCCAGGAGCAGTCTGTCTGGGCCTGATGCCGGGGGACTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTCAAAAGACAAGTGAGAGGAGTAAGACAGCCATGCCCTTTAATGTCCCCACACTCCTGCCCCAGAACTaGGGAGAGGGTGTGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: AQKTSERSKTAMPFNVPTLLPQN*GEGVLG Trigger: CCCCAGCACACCCTCTCCCAAGTTCTGGGGCAGGAG...TGTGGGGACATTAAAGGGCATGGCTGTCTTACTCCTCTCACTTGTCTTTTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTTAACTTTGCCTTTTCCATCCAACCAGGACAGGGACAATGGGTAGAGGTACTCCTGCCCCAGAACTaGGGAGAGGGTGTGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: AVNFAFSIQPGQGQWVEVLLPQN*GEGVLG Trigger: CCCCAGCACACCCTCTCCCAAGTTCTGGGGCAGGAG...TACCTCTACCCATTGTCCCTGTCCTGGTTGGATGGAAAAGGCAAAGTTAACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| 3UTR CCA 72 bp | AGAACTTGGGAGAGGGTGTGCTGGGGTGAGTGGAGGTaGGCTCACTGTCTATTTCTTTCCTGCTGCACGGAT | + |
|
Preference number: 3 (lower is better) Translates to: RTWERVCWGEWR*AHCLFLSCCTD Trigger: ATCCGTGCAGCAGGAAAGAAATAGACAGTGAGCCCACCTCCACTCACCCCAGCACACCCTCTCCCAAGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| 3UTR CCA 72 bp | AGTATTGGGGAATATTGGGCAGGCAGAACTGTAGTGTaGCTCCTTCGTGCTTCCTGCCTCCCTGCCAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SIGEYWAGRTVV*LLRASCLPARL Trigger: AAGCCTGGCAGGGAGGCAGGAAGCACGAAGGAGCCACACTACAGTTCTGCCTGCCCAATATTCCCCAATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| 3UTR GCA 72 bp | TATCTTTCAGAGACCACACCCAGCATCTCTCCCCTTTaGCCCACGCTAGTGCTTCCTGCAAACTGCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: YLSETTPSISPL*PTLVLPANCRA Trigger: AGCTCTGCAGTTTGCAGGAAGCACTAGCGTGGGGCAAAGGGGAGAGATGCTGGGTGTGGTCTCTGAAAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| 3UTR CCA 72 bp | TTGGGTGCAGGCAGGAAGGACAGTATTGGGGAATATTaGGCAGGCAGAACTGTAGTGTGGCTCCTTCGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGAGRKDSIGEY*AGRTVVWLLRA Trigger: AGCACGAAGGAGCCACACTACAGTTCTGCCTGCCCAATATTCCCCAATACTGTCCTTCCTGCCTGCACCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| 3UTR GCA 72 bp | GGTGAGTGGAGGTGGGCTCACTGTCTATTTCTTTCCTaGTGCACGGATGTATGTAGCATACATATACGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GEWRWAHCLFLS*CTDVCSIHIRV Trigger: CACACGTATATGTATGCTACATACATCCGTGCAGCAGGAAAGAAATAGACAGTGAGCCCACCTCCACTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR GCA 90 bp | CACCCACCCTTAGGTCAGTCCCCCGGCATCAGGCCCAGACAGACTGCTCCTGGCTGGCCCAGGGGCTGCTaGTTGCTCCTGCTTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HPPLGQSPGIRPRQTAPGWPRGC*LLLLLC Trigger: GCAGAGAAGCAGGAGCAAGCAGCAGCCCCTGGGCCA...GCCAGGAGCAGTCTGTCTGGGCCTGATGCCGGGGGACTGACCTAAGGGTGGGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR GCA 90 bp | CACCCACCCTTAGGTCAGTCCCCCGGCATCAGGCCCAGACAGACTGCTCCTGGCCCAGGGGCTGCTGCTTaGTCCTGCTTCTCTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HPPLGQSPGIRPRQTAPGPGAAA*SCFSAW Trigger: CCAAGCAGAGAAGCAGGAGCAAGCAGCAGCCCCTGG...GCCAGGAGCAGTCTGTCTGGGCCTGATGCCGGGGGACTGACCTAAGGGTGGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTAGGTCAGTCCCCCGGCATCAGGCCCAGACAGACTGCTCCTGGCTGCTCATGGCCCAGGGGCTGCTaGTTGCTCCTGCTTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLGQSPGIRPRQTAPGCSWPRGC*LLLLLC Trigger: GCAGAGAAGCAGGAGCAAGCAGCAGCCCCTGGGCCA...TGAGCAGCCAGGAGCAGTCTGTCTGGGCCTGATGCCGGGGGACTGACCTAAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CCA 90 bp | CTTCGTGCTTCCTGCCTCCCTGCCAGGCTTTCAGAACCACCCCCTCCCCGGAACTTTCCCATCCGCAGCTaGAGTGGCCTTGGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRASCLPARLSEPPPPRNFPIRS*SGLGLS Trigger: GCTGAGGCCAAGGCCACTCCAGCTGCGGATGGGAAA...GTTCCGGGGAGGGGGTGGTTCTGAAAGCCTGGCAGGGAGGCAGGAAGCACGAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| CDS-3UTR GCA 90 bp | AGCTGGGCTCCTGCCCCAGAACTTGGGAGAGGGTGTGCTGGGGTGAGTGGAGGTTATCTGGCTTGGGGCTaGTGGCTGACTTTCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SWAPAPELGRGCAGVSGGYLAWG*WLTFLG Trigger: CCCGAGGAAAGTCAGCCAGCAGCCCCAAGCCAGATA...ACCTCCACTCACCCCAGCACACCCTCTCCCAAGTTCTGGGGCAGGAGCCCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR GCA 90 bp | GTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTGGCCTGGCCCAGGGGCTGCTaGTTGCTCCTGCTTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VYFKLSLHSGPRSPPPLAWPRGC*LLLLLC Trigger: GCAGAGAAGCAGGAGCAAGCAGCAGCCCCTGGGCCA...GGCCAGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CCA 90 bp | CGGAAAGCTGCTCACTGTCACCACACCAAGGGGCAAGCTGGGGCCAGATGCACTCTTCTTCGTAGCGGCTaGCCCAGGGGCTGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKAAHCHHTKGQAGARCTLLRSG*PRGCCL Trigger: CAAGCAGCAGCCCCTGGGCCAGCCGCTACGAAGAAG...AGTGCATCTGGCCCCAGCTTGCCCCTTGGTGTGGTGACAGTGAGCAGCTTTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CCA 90 bp | ACCACACCCAGCATCTCTCCCCTTTGCCCCACGCTAGTGCTTCCTGCAAACTGCGGGCTGCCGGCACTGTaGGAGCTGGCTTCAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TTPSISPLCPTLVLPANCGLPAL*ELASGC Trigger: GCAACCTGAAGCCAGCTCCCACAGTGCCGGCAGCCC...GCAGTTTGCAGGAAGCACTAGCGTGGGGCAAAGGGGAGAGATGCTGGGTGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR GCA 90 bp | ACCACACCCAGCATCTCTCCCCTTTGCCCCACGCTAGTGCTTCCTGCAAACTGCTGGCCCAGGGGCTGCTaGTTGCTCCTGCTTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TTPSISPLCPTLVLPANCWPRGC*LLLLLC Trigger: GCAGAGAAGCAGGAGCAAGCAGCAGCCCCTGGGCCA...GCAGTTTGCAGGAAGCACTAGCGTGGGGCAAAGGGGAGAGATGCTGGGTGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CCA 90 bp | ACCACACCCAGCATCTCTCCCCTTTGCCCCACGCTAGTGCTTCCTGCAAACTGCCAGCTGGAGTGGCCTTaGCCTCAGCTGTGGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TTPSISPLCPTLVLPANCQLEWP*PQLWPE Trigger: CTCAGGCCACAGCTGAGGCCAAGGCCACTCCAGCTG...GCAGTTTGCAGGAAGCACTAGCGTGGGGCAAAGGGGAGAGATGCTGGGTGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGAGACCACACCCAGCATCTCTCCCCTTTGCCCCACGCTAGTGCTTCCTGGGCTGCCGGCACTGTaGGAGCTGGCTTCAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSETTPSISPLCPTLVLPGLPAL*ELASGC Trigger: GCAACCTGAAGCCAGCTCCCACAGTGCCGGCAGCCC...AGGAAGCACTAGCGTGGGGCAAAGGGGAGAGATGCTGGGTGTGGTCTCTGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CCA 90 bp | CTTCGTGCTTCCTGCCTCCCTGCCAGGCTTTCAGAACCACCCCCTCCCCGGAACCAAGAATTAGAGCTATaGTGGCCACGGCCACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRASCLPARLSEPPPPRNQELEL*WPRPHP Trigger: GGGGTGTGGCCGTGGCCACCATAGCTCTAATTCTTG...GTTCCGGGGAGGGGGTGGTTCTGAAAGCCTGGCAGGGAGGCAGGAAGCACGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCACCCACCCTTAGGTCAGTCCCCCGGCATCAGGCCCAGACAGACTGCTCAAGAATTAGAGCTATaGTGGCCACGGCCACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSHPPLGQSPGIRPRQTAQELEL*WPRPHP Trigger: GGGGTGTGGCCGTGGCCACCATAGCTCTAATTCTTG...AGCAGTCTGTCTGGGCCTGATGCCGGGGGACTGACCTAAGGGTGGGTGGGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164387.2 |
||
| CDS-3UTR TCA 90 bp | AGCTGGGCTCCTGCCCCAGAACTTGGGAGAGGGTGTGCTGGGGTGAGTGGAGGTGGTTGCTGTGGTTGTTaGGAAGTACAGGATCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SWAPAPELGRGCAGVSGGGCCGC*EVQDLP Trigger: AGGCAGATCCTGTACTTCTCAACAACCACAGCAACC...ACCTCCACTCACCCCAGCACACCCTCTCCCAAGTTCTGGGGCAGGAGCCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR GCA 90 bp | AACGGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTCCAGGGGCTGCTGCTTaGTCCTGCTTCTCTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NGLFQTQSPLRPKVPAATPGAAA*SCFSAW Trigger: CCAAGCAGAGAAGCAGGAGCAAGCAGCAGCCCCTGG...AGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACCGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CCA 90 bp | GAGCCCACTGCAGTTTTCCGGAAAGCTGCTCACTGTCACCACACCAAGGGGCAATTTCCCATCCGCAGCTaGAGTGGCCTTGGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EPTAVFRKAAHCHHTKGQFPIRS*SGLGLS Trigger: GCTGAGGCCAAGGCCACTCCAGCTGCGGATGGGAAA...TTGCCCCTTGGTGTGGTGACAGTGAGCAGCTTTCCGGAAAACTGCAGTGGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CCA 90 bp | ACCACACCCAGCATCTCTCCCCTTTGCCCCACGCTAGTGCTTCCTGCAAACTGCGAATTAGAGCTATGGTaGCCACGGCCACACCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTPSISPLCPTLVLPANCELELW*PRPHPQ Trigger: CTGGGGGTGTGGCCGTGGCCACCATAGCTCTAATTC...GCAGTTTGCAGGAAGCACTAGCGTGGGGCAAAGGGGAGAGATGCTGGGTGTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR GCA 90 bp | AACGGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTGCTGCTGCTTGCTCCTaGTTCTCTGCTTGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NGLFQTQSPLRPKVPAATAAACS*FSAWVS Trigger: GGACACCCAAGCAGAGAAGCAGGAGCAAGCAGCAGC...AGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CCA 90 bp | CCAACCAGGACAGGGACAATGGGTAGAGGTAGCTCTGCAGATTTGAATCCCACCCAGCTGGAGTGGCCTTaGCCTCAGCTGTGGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTRTGTMGRGSSADLNPTQLEWP*PQLWPE Trigger: CTCAGGCCACAGCTGAGGCCAAGGCCACTCCAGCTG...GGTGGGATTCAAATCTGCAGAGCTACCTCTACCCATTGTCCCTGTCCTGGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| CDS-3UTR CCA 90 bp | AGACTGCTCCTGGCTGCTCAAAAGACAAGTGAGAGGAGTAAGACAGCCATGCCCCTTCTTCGTAGCGGCTaGCCCAGGGGCTGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLLLAAQKTSERSKTAMPLLRSG*PRGCCL Trigger: CAAGCAGCAGCCCCTGGGCCAGCCGCTACGAAGAAG...GGGCATGGCTGTCTTACTCCTCTCACTTGTCTTTTGAGCAGCCAGGAGCAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGACAGTATTGGGGAATATTGGGCAGGCAGAACTGTAGTGTGGCTCCTTCGGGGCTGCCGGCACTGTaGGAGCTGGCTTCAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGQYWGILGRQNCSVAPSGLPAL*ELASGC Trigger: GCAACCTGAAGCCAGCTCCCACAGTGCCGGCAGCCC...CGAAGGAGCCACACTACAGTTCTGCCTGCCCAATATTCCCCAATACTGTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| CDS-3UTR CCA 90 bp | AACGGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTGAATTAGAGCTATGGTaGCCACGGCCACACCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NGLFQTQSPLRPKVPAATELELW*PRPHPQ Trigger: CTGGGGGTGTGGCCGTGGCCACCATAGCTCTAATTC...AGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACCGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| 3UTR CAA 72 bp | GGCTGCACAGCAGGTCTTCCTGCAGGCAGTGAGCGATaGCCACTCACCGGGCAGTTCTACTCTACCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GCTAGLPAGSER*PLTGQFYSTCV Trigger: AACACAGGTAGAGTAGAACTGCCCGGTGAGTGGCAATCGCTCACTGCCTGCAGGAAGACCTGCTGTGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| CDS-3UTR TCA 90 bp | GGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTGGCGGTTGCTGTGGTTGTTaGGAAGTACAGGATCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLFQTQSPLRPKVPAATGGCCGC*EVQDLP Trigger: AGGCAGATCCTGTACTTCTCAACAACCACAGCAACC...GCCAGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR GCA 90 bp | CCAACCAGGACAGGGACAATGGGTAGAGGTAGCTCTGCAGATTTGAATCCCACCCCAGGGGCTGCTGCTTaGTCCTGCTTCTCTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTRTGTMGRGSSADLNPTPGAAA*SCFSAW Trigger: CCAAGCAGAGAAGCAGGAGCAAGCAGCAGCCCCTGG...GGTGGGATTCAAATCTGCAGAGCTACCTCTACCCATTGTCCCTGTCCTGGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTGGCCCTTCTTCACAGGCTTaGTCAAGGGAGCTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLFQTQSPLRPKVPAATGPSSQA*SRELSH Trigger: ATGGGAAAGCTCCCTTGACCAAGCCTGTGAAGAAGG...GCCAGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CCA 90 bp | GTAACGGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACAAGAATTAGAGCTATaGTGGCCACGGCCACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VTVYFKLSLHSGPRSPPPQELEL*WPRPHP Trigger: GGGGTGTGGCCGTGGCCACCATAGCTCTAATTCTTG...TGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACCGTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR GCA 90 bp | AGACTGCTCCTGGCTGCTCAAAAGACAAGTGAGAGGAGTAAGACAGCCATGCCCTATCTGGCTTGGGGCTaGTGGCTGACTTTCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLLAAQKTSERSKTAMPYLAWG*WLTFLG Trigger: CCCGAGGAAAGTCAGCCAGCAGCCCCAAGCCAGATA...GGGCATGGCTGTCTTACTCCTCTCACTTGTCTTTTGAGCAGCCAGGAGCAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR GCA 90 bp | CTAGCGCACTCCATCACTTATCTTTCAGAGACCACACCCAGCATCTCTCCCCTTCCAGGGGCTGCTGCTTaGTCCTGCTTCTCTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAHSITYLSETTPSISPLPGAAA*SCFSAW Trigger: CCAAGCAGAGAAGCAGGAGCAAGCAGCAGCCCCTGG...AAGGGGAGAGATGCTGGGTGTGGTCTCTGAAAGATAAGTGATGGAGTGCGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGGCATACACTGACAGAGGGAAGAGGTGGGAACCCCATCCCAAACTCAGCCCTTCTTCACAGGCTTaGTCAAGGGAGCTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGAYTDRGKRWEPHPKLSPSSQA*SRELSH Trigger: ATGGGAAAGCTCCCTTGACCAAGCCTGTGAAGAAGG...GCTGAGTTTGGGATGGGGTTCCCACCTCTTCCCTCTGTCAGTGTATGCCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| 3UTR CAA 72 bp | GTTGGGTGCAGGCAGGAAGGACAGTATTGGGGAATATaGGGCAGGCAGAACTGTAGTGTGGCTCCTTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGCRQEGQYWGI*GRQNCSVAPSC Trigger: GCACGAAGGAGCCACACTACAGTTCTGCCTGCCCAATATTCCCCAATACTGTCCTTCCTGCCTGCACCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCCACTGCAGTTTTCCGGAAAGCTGCTCACTGTCACCACACCAAGGGGCAAGGTTGCTGTGGTTGTTaGGAAGTACAGGATCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EPTAVFRKAAHCHHTKGQGCCGC*EVQDLP Trigger: AGGCAGATCCTGTACTTCTCAACAACCACAGCAACC...TTGCCCCTTGGTGTGGTGACAGTGAGCAGCTTTCCGGAAAACTGCAGTGGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTTAACTTTGCCTTTTCCATCCAACCAGGACAGGGACAATGGGTAGAGGTACAGCTGGAGTGGCCTTaGCCTCAGCTGTGGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVNFAFSIQPGQGQWVEVQLEWP*PQLWPE Trigger: CTCAGGCCACAGCTGAGGCCAAGGCCACTCCAGCTG...TACCTCTACCCATTGTCCCTGTCCTGGTTGGATGGAAAAGGCAAAGTTAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| CDS-3UTR CCA 90 bp | AACGGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTCCTTCTTCACAGGCTTaGTCAAGGGAGCTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NGLFQTQSPLRPKVPAATPSSQA*SRELSH Trigger: ATGGGAAAGCTCCCTTGACCAAGCCTGTGAAGAAGG...AGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| CDS-3UTR CCA 90 bp | CGCACTCCATCACTTATCTTTCAGAGACCACACCCAGCATCTCTCCCCTTTGCCCAAGAATTAGAGCTATaGTGGCCACGGCCACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTPSLIFQRPHPASLPFAQELEL*WPRPHP Trigger: GGGGTGTGGCCGTGGCCACCATAGCTCTAATTCTTG...GGCAAAGGGGAGAGATGCTGGGTGTGGTCTCTGAAAGATAAGTGATGGAGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| 3UTR CAA 72 bp | TTATCTTTCAGAGACCACACCCAGCATCTCTCCCCTTaGCCCCACGCTAGTGCTTCCTGCAAACTGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSFRDHTQHLSP*PHASASCKLQS Trigger: GCTCTGCAGTTTGCAGGAAGCACTAGCGTGGGGCAAAGGGGAGAGATGCTGGGTGTGGTCTCTGAAAGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| CDS-3UTR CCA 90 bp | GGTGTTGGGTGCAGGCAGGAAGGACAGTATTGGGGAATATTGGGCAGGCAGAACCCTTCTTCACAGGCTTaGTCAAGGGAGCTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GVGCRQEGQYWGILGRQNPSSQA*SRELSH Trigger: ATGGGAAAGCTCCCTTGACCAAGCCTGTGAAGAAGG...GTTCTGCCTGCCCAATATTCCCCAATACTGTCCTTCCTGCCTGCACCCAACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| CDS-3UTR CCA 90 bp | TTATATTGTAACGGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCCTTCTTCGTAGCGGCTaGCCCAGGGGCTGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LYCNGLFQTQSPLRPKVPLLRSG*PRGCCL Trigger: CAAGCAGCAGCCCCTGGGCCAGCCGCTACGAAGAAG...GGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACCGTTACAATATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 |
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| 3UTR CAA 72 bp | GAGGTGGGAACCCCATCCCAAACTCAGCTGTTAACTTaGCCTTTTCCATCCAACCAGGACAGGGACAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVGTPSQTQLLT*PFPSNQDRDNG Trigger: CCCATTGTCCCTGTCCTGGTTGGATGGAAAAGGCAAAGTTAACAGCTGAGTTTGGGATGGGGTTCCCACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| CDS-3UTR CCA 90 bp | CACTCACCGGGCAGTTCTACTCTACCTGTGTTATTGCATTTATACGCTGTTAAAGGGCTGCCGGCACTGTaGGAGCTGGCTTCAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSPGSSTLPVLLHLYAVKGLPAL*ELASGC Trigger: GCAACCTGAAGCCAGCTCCCACAGTGCCGGCAGCCC...TTTAACAGCGTATAAATGCAATAACACAGGTAGAGTAGAACTGCCCGGTGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| CDS-3UTR GCA 90 bp | TTATATTGTAACGGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCTGCTGCTTGCTCCTaGTTCTCTGCTTGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYCNGLFQTQSPLRPKVPAAACS*FSAWVS Trigger: GGACACCCAAGCAGAGAAGCAGGAGCAAGCAGCAGC...GGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACCGTTACAATATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 |
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| CDS-3UTR CCA 90 bp | CTCACTGTCTATTTCTTTCCTGCTGCACGGATGTATGTAGCATACATATACGTGCTTCTTCGTAGCGGCTaGCCCAGGGGCTGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTVYFFPAARMYVAYIYVLLRSG*PRGCCL Trigger: CAAGCAGCAGCCCCTGGGCCAGCCGCTACGAAGAAG...CACGTATATGTATGCTACATACATCCGTGCAGCAGGAAAGAAATAGACAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| CDS-3UTR CCA 90 bp | TTATATTGTAACGGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGAATTAGAGCTATGGTaGCCACGGCCACACCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYCNGLFQTQSPLRPKVPELELW*PRPHPQ Trigger: CTGGGGGTGTGGCCGTGGCCACCATAGCTCTAATTC...GGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACCGTTACAATATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTGGCTGCTCAAAAGACAAGTGAGAGGAGTAAGACAGCCATGCCCTTTAATGGTTGCTGTGGTTGTTaGGAAGTACAGGATCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLAAQKTSERSKTAMPFNGCCGC*EVQDLP Trigger: AGGCAGATCCTGTACTTCTCAACAACCACAGCAACC...ATTAAAGGGCATGGCTGTCTTACTCCTCTCACTTGTCTTTTGAGCAGCCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| CDS-3UTR GCA 90 bp | CACTCACCGGGCAGTTCTACTCTACCTGTGTTATTGCATTTATACGCTGTTAAATATCTGGCTTGGGGCTaGTGGCTGACTTTCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSPGSSTLPVLLHLYAVKYLAWG*WLTFLG Trigger: CCCGAGGAAAGTCAGCCAGCAGCCCCAAGCCAGATA...TTTAACAGCGTATAAATGCAATAACACAGGTAGAGTAGAACTGCCCGGTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| CDS-3UTR CAA 90 bp | TTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTGGCCAGGTGCCTCGGCCTCCAGTGTaGGACTCGTCCTCCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FQTQSPLRPKVPAATGQVPRPPV*DSSSSA Trigger: GGCAGAGGAGGACGAGTCCAACACTGGAGGCCGAGG...CACCTGGCCAGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGGGCATACACTGACAGAGGGAAGAGGTGGGAACCCCATCCCAAACTCAGCCCTCGGCCTCCAGTGTaGGACTCGTCCTCCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGAYTDRGKRWEPHPKLSPRPPV*DSSSSA Trigger: GGCAGAGGAGGACGAGTCCAACACTGGAGGCCGAGG...GCTGAGTTTGGGATGGGGTTCCCACCTCTTCCCTCTGTCAGTGTATGCCCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| CDS-3UTR CAA 90 bp | CGGAACAATTGGCTGCTCTGGGCAGGAAGTAAGGTGGTCCTAGCCTCCGGTGCTCCCAGGGGCTGCTGCTaGCTCCTGCTTCTCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RNNWLLWAGSKVVLASGAPRGCC*LLLLCL Trigger: CAAGCAGAGAAGCAGGAGCAAGCAGCAGCCCCTGGG...AGCACCGGAGGCTAGGACCACCTTACTTCCTGCCCAGAGCAGCCAATTGTTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
||
| CDS CCA 90 bp | GAGAAGTACAGGATCTGCCTTGGCTGGTGTCTTCTTCGTAGCGGCTaGCCCAGGGGCTGCTGCTTGCTCCTGCTTCTCTGCTTGGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EKYRICLGWCLLRSG*PRGCCLLLLLCLGV Trigger: GACACCCAAGCAGAGAAGCAGGAGCAAGCAGCAGCCCCTGGGCCAGCCGCTACGAAGAAGACACCAGCCAAGGCAGATCCTGTACTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CAA 90 bp | CACCCACCCTTAGGTCAGTCCCCCGGCATCAGGCCCAGACAGACTGCTCCTGGCAGTACAGGATCTGCCTaGGCTGGTGTCTTCTTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: HPPLGQSPGIRPRQTAPGSTGSA*AGVFFV Trigger: TACGAAGAAGACACCAGCCAAGGCAGATCCTGTACT...GCCAGGAGCAGTCTGTCTGGGCCTGATGCCGGGGGACTGACCTAAGGGTGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CAA 90 bp | CGGAAAGCTGCTCACTGTCACCACACCAAGGGGCAAGCTGGGGCCAGATGCACTCTCCTGCTTCTCTGCTaGGGTGTCCTTCTTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKAAHCHHTKGQAGARCTLLLLC*GVLLHR Trigger: CCTGTGAAGAAGGACACCCAAGCAGAGAAGCAGGAG...AGTGCATCTGGCCCCAGCTTGCCCCTTGGTGTGGTGACAGTGAGCAGCTTTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CAA 90 bp | AGACTGCTCCTGGCTGCTCAAAAGACAAGTGAGAGGAGTAAGACAGCCATGCCCCCTCGGCCTCCAGTGTaGGACTCGTCCTCCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLLLAAQKTSERSKTAMPPRPPV*DSSSSA Trigger: GGCAGAGGAGGACGAGTCCAACACTGGAGGCCGAGG...GGGCATGGCTGTCTTACTCCTCTCACTTGTCTTTTGAGCAGCCAGGAGCAGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CAA 90 bp | ACCACACCCAGCATCTCTCCCCTTTGCCCCACGCTAGTGCTTCCTGCAAACTGCCTCCTGCTTCTCTGCTaGGGTGTCCTTCTTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: TTPSISPLCPTLVLPANCLLLLC*GVLLHR Trigger: CCTGTGAAGAAGGACACCCAAGCAGAGAAGCAGGAG...GCAGTTTGCAGGAAGCACTAGCGTGGGGCAAAGGGGAGAGATGCTGGGTGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCCCACCCACCCTTAGGTCAGTCCCCCGGCATCAGGCCCAGACAGACTGCTAGTACAGGATCTGCCTaGGCTGGTGTCTTCTTCGTA | + |
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Preference number: 5 (lower is better) Translates to: SSHPPLGQSPGIRPRQTASTGSA*AGVFFV Trigger: TACGAAGAAGACACCAGCCAAGGCAGATCCTGTACT...AGCAGTCTGTCTGGGCCTGATGCCGGGGGACTGACCTAAGGGTGGGTGGGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164387.2 |
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| CDS-3UTR CAA 90 bp | CGGTTTATTTCAAACTCAGTCTCCACTCCGGCCCAAGGTCCCCGCCGCCACTGGAGGTTGCTGTGGTTGTaGAGAAGTACAGGATCTGCC | + |
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Preference number: 5 (lower is better) Translates to: RFISNSVSTPAQGPRRHWRLLWL*RSTGSA Trigger: GGCAGATCCTGTACTTCTCAACAACCACAGCAACCT...CCAGTGGCGGCGGGGACCTTGGGCCGGAGTGGAGACTGAGTTTGAAATAAACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| CDS-3UTR CAA 90 bp | CGGAACAATTGGCTGCTCTGGGCAGGAAGTAAGGTGGTCCTAGCCTCCGGTGCTAGTACAGGATCTGCCTaGGCTGGTGTCTTCTTCGTA | + |
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Preference number: 5 (lower is better) Translates to: RNNWLLWAGSKVVLASGASTGSA*AGVFFV Trigger: TACGAAGAAGACACCAGCCAAGGCAGATCCTGTACT...AGCACCGGAGGCTAGGACCACCTTACTTCCTGCCCAGAGCAGCCAATTGTTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| CDS-3UTR CAA 90 bp | GGGGCCAGATGCACTAAAGAGGGGCTGCACAGCAGGTCTTCCCACCCACCCTTATTCAGGTTGCTGTGGTaGTTGAGAAGTACAGGATCT | + |
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Preference number: 5 (lower is better) Translates to: GARCTKEGLHSRSSHPPLFRLLW*LRSTGS Trigger: AGATCCTGTACTTCTCAACAACCACAGCAACCTGAA...TAAGGGTGGGTGGGAAGACCTGCTGTGCAGCCCCTCTTTAGTGCATCTGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164387.2 |
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| CDS-3UTR CAA 90 bp | CTAGGACCTTGCATGCACTATATATTCAGGTCTGTACAGAAAGTGGCTCTGTGCCCTCGGCCTCCAGTGTaGGACTCGTCCTCCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LGPCMHYIFRSVQKVALCPRPPV*DSSSSA Trigger: GGCAGAGGAGGACGAGTCCAACACTGGAGGCCGAGG...GCACAGAGCCACTTTCTGTACAGACCTGAATATATAGTGCATGCAAGGTCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| CDS-3UTR CAA 90 bp | GAAGGACAGTATTGGGGAATATTGGGCAGGCAGAACTGTAGTGTGGCTCCTTCGCTCCTGCTTCTCTGCTaGGGTGTCCTTCTTCACAGG | + |
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Preference number: 5 (lower is better) Translates to: EGQYWGILGRQNCSVAPSLLLLC*GVLLHR Trigger: CCTGTGAAGAAGGACACCCAAGCAGAGAAGCAGGAG...CGAAGGAGCCACACTACAGTTCTGCCTGCCCAATATTCCCCAATACTGTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| CDS-3UTR CAA 90 bp | GCGCACTCCATCACTTATCTTTCAGAGACCACACCCAGCATCTCTCCCCTTTGCAGGTTGCTGTGGTTGTaGAGAAGTACAGGATCTGCC | + |
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Preference number: 5 (lower is better) Translates to: AHSITYLSETTPSISPLCRLLWL*RSTGSA Trigger: GGCAGATCCTGTACTTCTCAACAACCACAGCAACCT...GCAAAGGGGAGAGATGCTGGGTGTGGTCTCTGAAAGATAAGTGATGGAGTGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| CDS-3UTR CAA 90 bp | CTCCTGGCTGCTCAAAAGACAAGTGAGAGGAGTAAGACAGCCATGCCCTTTAATCTCCTGCTTCTCTGCTaGGGTGTCCTTCTTCACAGG | + |
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Preference number: 5 (lower is better) Translates to: LLAAQKTSERSKTAMPFNLLLLC*GVLLHR Trigger: CCTGTGAAGAAGGACACCCAAGCAGAGAAGCAGGAG...ATTAAAGGGCATGGCTGTCTTACTCCTCTCACTTGTCTTTTGAGCAGCCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| CDS-3UTR CAA 90 bp | GAAGGACAGTATTGGGGAATATTGGGCAGGCAGAACTGTAGTGTGGCTCCTTCGAGTACAGGATCTGCCTaGGCTGGTGTCTTCTTCGTA | + |
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Preference number: 5 (lower is better) Translates to: EGQYWGILGRQNCSVAPSSTGSA*AGVFFV Trigger: TACGAAGAAGACACCAGCCAAGGCAGATCCTGTACT...CGAAGGAGCCACACTACAGTTCTGCCTGCCCAATATTCCCCAATACTGTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 |
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| CDS-3UTR CAA 90 bp | CGCACTCCATCACTTATCTTTCAGAGACCACACCCAGCATCTCTCCCCTTTGCCTTCAGGTTGCTGTGGTaGTTGAGAAGTACAGGATCT | + |
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Preference number: 5 (lower is better) Translates to: RTPSLIFQRPHPASLPFAFRLLW*LRSTGS Trigger: AGATCCTGTACTTCTCAACAACCACAGCAACCTGAA...GGCAAAGGGGAGAGATGCTGGGTGTGGTCTCTGAAAGATAAGTGATGGAGTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| CDS-3UTR CAA 90 bp | AGACTGCTCCTGGCTGCTCAAAAGACAAGTGAGAGGAGTAAGACAGCCATGCCCTTCAGGTTGCTGTGGTaGTTGAGAAGTACAGGATCT | + |
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Preference number: 5 (lower is better) Translates to: RLLLAAQKTSERSKTAMPFRLLW*LRSTGS Trigger: AGATCCTGTACTTCTCAACAACCACAGCAACCTGAA...GGGCATGGCTGTCTTACTCCTCTCACTTGTCTTTTGAGCAGCCAGGAGCAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| CDS-3UTR CAA 90 bp | GCGCACTCCATCACTTATCTTTCAGAGACCACACCCAGCATCTCTCCCCTTTGCTTCAGGTTGCTGTGGTaGTTGAGAAGTACAGGATCT | + |
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Preference number: 5 (lower is better) Translates to: AHSITYLSETTPSISPLCFRLLW*LRSTGS Trigger: AGATCCTGTACTTCTCAACAACCACAGCAACCTGAA...GCAAAGGGGAGAGATGCTGGGTGTGGTCTCTGAAAGATAAGTGATGGAGTGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| CDS-3UTR CAA 90 bp | CTAGGACCTTGCATGCACTATATATTCAGGTCTGTACAGAAAGTGGCTCTGTGCAGGTTGCTGTGGTTGTaGAGAAGTACAGGATCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LGPCMHYIFRSVQKVALCRLLWL*RSTGSA Trigger: GGCAGATCCTGTACTTCTCAACAACCACAGCAACCT...GCACAGAGCCACTTTCTGTACAGACCTGAATATATAGTGCATGCAAGGTCCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| CDS CCA 72 bp | AGGATCTGCCTTGGCTGGTGTCTTCTTCGTAGCGGCTaGCCCAGGGGCTGCTGCTTGCTCCTGCTTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: RICLGWCLLRSG*PRGCCLLLLLC Trigger: GCAGAGAAGCAGGAGCAAGCAGCAGCCCCTGGGCCAGCCGCTACGAAGAAGACACCAGCCAAGGCAGATCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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| CDS GCA 72 bp | TTCGTAGCGGCTGGCCCAGGGGCTGCTGCTTGCTCCTaGTTCTCTGCTTGGGTGTCCTTCTTCACAGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: FVAAGPGAAACS*FSAWVSFFTGL Trigger: CAAGCCTGTGAAGAAGGACACCCAAGCAGAGAAGCAGGAGCAAGCAGCAGCCCCTGGGCCAGCCGCTACGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084436.10 ENSMUST00000124444.2 ENSMUST00000137488.2 ENSMUST00000164387.2 |
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