RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEMIP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000052353

Ensembl transcript IDs: ENSMUST00000064174.12

Found 369 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCAGCACCAAGGTCTCTGATATCTGTCCCTTAGCCCAGCAGAGCTaGGAACCAGGGGGCCTAGCCATCCTGACCCCGGCTGCTGTAGGG +
Preference number: 1 (lower is better)
Translates to: GSTKVSDICPLAQQS*EPGGLAILTPAAVG
Trigger: CCCTACAGCAGCCGGGGTCAGGATGGCTAGGCCCCCTGGTTCTCAGCTCTGCTGGGCTAAGGGACAGATATCAGAGACCTTGGTGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR TCA 90 bp CTGCAGGTAGACTTGAGTAGGGGCAGGTGGCAGCACCAAGGTCTCTaGTATCTGTCCCTTAGCCCAGCAGAGCTGAGAACCAGGGGGCCT +
Preference number: 1 (lower is better)
Translates to: LQVDLSRGRWQHQGL*YLSLSPAELRTRGP
Trigger: AGGCCCCCTGGTTCTCAGCTCTGCTGGGCTAAGGGACAGATATCAGAGACCTTGGTGCTGCCACCTGCCCCTACTCAAGTCTACCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CCA 90 bp TGTGGTGAGGTTCCCCTCCTCCAATCCACCTCTGCTCTCTCAACCTaGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCAGCTGAC +
Preference number: 1 (lower is better)
Translates to: CGEVPLLQSTSALST*YQSVLRPGCLSPAD
Trigger: GTCAGCTGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGAGGTGGATTGGAGGAGGGGAACCTCACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CCA 90 bp GCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTaGGCAGTGTGTACTGAGGGGCAAGAGGGAAAAGCCCTTTGCAAA +
Preference number: 1 (lower is better)
Translates to: AGSVKTVAGLLPRGE*AVCTEGQEGKALCK
Trigger: TTTGCAAAGGGCTTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR GCA 90 bp AGACCATCTCCTAGGTGGGTTCAGACTCCTGCCCAAGTGGCCCTTTaGTGCCAGCACAACTCAGGTCTCTTTGTATGGTCCCCATGCCTA +
Preference number: 1 (lower is better)
Translates to: RPSPRWVQTPAQVAL*CQHNSGLFVWSPCL
Trigger: TAGGCATGGGGACCATACAAAGAGACCTGAGTTGTGCTGGCAGCAAAGGGCCACTTGGGCAGGAGTCTGAACCCACCTAGGAGATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR TCA 90 bp ACCATCACCTTCCAGAAGAAGCCTTCCCCATGTTTCTGGGTGTGGTaGGGTTCCCCTCCTCCAATCCACCTCTGCTCTCTCAACCTGGTA +
Preference number: 1 (lower is better)
Translates to: TITFQKKPSPCFWVW*GSPPPIHLCSLNLV
Trigger: TACCAGGTTGAGAGAGCAGAGGTGGATTGGAGGAGGGGAACCTCACCACACCCAGAAACATGGGGAAGGCTTCTTCTGGAAGGTGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR TCA 90 bp TCTCCGCAGACCCTGCTTCTCTATCACAAGTGGGTCAGCAAGAGGTaGCCTAGCATGACTCAGATGCTGCAAGTGGTGGCAGGAAAGCCT +
Preference number: 1 (lower is better)
Translates to: SPQTLLLYHKWVSKR*PSMTQMLQVVAGKP
Trigger: AGGCTTTCCTGCCACCACTTGCAGCATCTGAGTCATGCTAGGTCACCTCTTGCTGACCCACTTGTGATAGAGAAGCAGGGTCTGCGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CCA 90 bp CATTATCCAGACCATCTCCTAGGTGGGTTCAGACTCCTGCCCAAGTaGCCCTTTGCTGCCAGCACAACTCAGGTCTCTTTGTATGGTCCC +
Preference number: 1 (lower is better)
Translates to: HYPDHLLGGFRLLPK*PFAASTTQVSLYGP
Trigger: GGGACCATACAAAGAGACCTGAGTTGTGCTGGCAGCAAAGGGCCACTTGGGCAGGAGTCTGAACCCACCTAGGAGATGGTCTGGATAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR GCA 90 bp TCAGATGCTGCAAGTGGTGGCAGGAAAGCCTTCACCTCTGAGCCATaGCAGAGGCCACCTCTTCTCTCTTCATCATCTCTGTCCTTGATT +
Preference number: 1 (lower is better)
Translates to: SDAASGGRKAFTSEP*QRPPLLSSSSLSLI
Trigger: AATCAAGGACAGAGATGATGAAGAGAGAAGAGGTGGCCTCTGGCATGGCTCAGAGGTGAAGGCTTTCCTGCCACCACTTGCAGCATCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CCA 90 bp CCTGATGCTACCCATTGGGCATACCAGCACCACTGTGGAATAAGGTaGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATGCCCACAT +
Preference number: 1 (lower is better)
Translates to: PDATHWAYQHHCGIR*HQKNSTVMSSPCPH
Trigger: ATGTGGGCATGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTGCTGGTATGCCCAATGGGTAGCATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR GCA 90 bp CCTTCCATCTGCCACTTAATGTATCTGAAAGTGACTATGGAAATCTaGAAGTGGTCACATTATCCAGACCATCTCCTAGGTGGGTTCAGA +
Preference number: 1 (lower is better)
Translates to: PSICHLMYLKVTMEI*KWSHYPDHLLGGFR
Trigger: TCTGAACCCACCTAGGAGATGGTCTGGATAATGTGACCACTTGCAGATTTCCATAGTCACTTTCAGATACATTAAGTGGCAGATGGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR TCA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAAGTGGCAGTGGGTTGCTaGGCTTGGGGCTCACAGACC +
Preference number: 2 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKVAVGC*AWGSQT
Trigger: GGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCAC...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CAA 90 bp GGACACCCCAGGCTAGCCACTGAGGCAATGTGGTGTGGCAGTGGGTaGCTGAGCTTGGGGCTCACAGACCTGGCTGTGTTATTGAGTACC +
Preference number: 2 (lower is better)
Translates to: GHPRLATEAMWCGSG*LSLGLTDLAVLLST
Trigger: GGTACTCAATAACACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCCTCAGTGGCTAGCCTGGGGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR TCA 90 bp GGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACCTGGCTGTGGTATCAAAGTGTGCTaGGACCTGGCTGCCTGTCAC +
Preference number: 2 (lower is better)
Translates to: GNVVWQWVAELGAHRPGCGIKVC*DLAACH
Trigger: GTGACAGGCAGCCAGGTCTCAGCACACTTTGATACC...ACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CCA 90 bp CCACATGTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGTAGGGGTCCAGCCTaGGGTGGTACCAAGTGGCAA +
Preference number: 2 (lower is better)
Translates to: PHVAGSVKTVAGLLPRGECRGPA*GGTKWQ
Trigger: TTGCCACTTGGTACCACCCCAGGCTGGACCCCTACA...CTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCACATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR TCA 90 bp TCAGATTTCCTGGAGTCTTCTGCTCAGCTCCAAGCTGAAGTGCACTGGAGACCCCTGCCTGTCACCAGCTaGCCCCCAGGTCTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: SDFLESSAQLQAEVHWRPLPVTS*PPGLSS
Trigger: AGAGCTCAGACCTGGGGGTCAGCTGGTGACAGGCAG...GGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAGGAAATCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR TCA 90 bp TGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGCATCATCTCTGTCCTTaGTTCCTGCCAGGACCATCA +
Preference number: 2 (lower is better)
Translates to: WQGCCLEESGQCVLRGKRHHLCP*FLPGPS
Trigger: TGATGGTCCTGGCAGGAATCAAGGACAGAGATGATG...CCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CCA 90 bp TCCTGGTCTGGAGCCAACCACTCTCAGATCCCCACAAGGAGCCAATTGGCCCAGCTCAGATGCTGCAAGTaGTGGCAGGAAAGCCTTCAC +
Preference number: 2 (lower is better)
Translates to: SWSGANHSQIPTRSQLAQLRCCK*WQESLH
Trigger: GTGAAGGCTTTCCTGCCACCACTTGCAGCATCTGAG...CTGGGCCAATTGGCTCCTTGTGGGGATCTGAGAGTGGTTGGCTCCAGACCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR GCA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCAGTGGGTTCAGACTCCTaGCCAAGTGGCCCTTTGCTG +
Preference number: 2 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPVGSDS*PSGPLL
Trigger: CAGCAAAGGGCCACTTGGGCAGGAGTCTGAACCCAC...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR GCA 90 bp CCACATGTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGAGCTCCAAGCTGAAGTaGACTGGAGACCCATTGTAC +
Preference number: 2 (lower is better)
Translates to: PHVAGSVKTVAGLLPRGESSKLK*TGDPLY
Trigger: GTACAATGGGTCTCCAGTGCACTTCAGCTTGGAGCT...CTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCACATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CCA 90 bp GGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACCTGGCTGTGTAGGTACAAAATGCTaGGCTAGATGGTCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: GNVVWQWVAELGAHRPGCVGTKC*ARWSSR
Trigger: CCTTGAGGACCATCTAGCCCAGCATTTTGTACCTAC...ACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CAA 90 bp GAGCCATGCCAGAGGCCACCTCTTCTCTCTTCATCATCTCTGTCCTaGATTCCTGCCAGGACCATCACCTTCCAGAAGAAGCCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: EPCQRPPLLSSSSLS*IPARTITFQKKPSP
Trigger: TGGGGAAGGCTTCTTCTGGAAGGTGATGGTCCTGGCAGGAATCAAGGACAGAGATGATGAAGAGAGAAGAGGTGGCCTCTGGCATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CAA 90 bp AGGCTAGCCACTGAGGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTaGGGGCTCACAGACCTGGCTGTGTTATTGAGTACCATTTTCCTC +
Preference number: 2 (lower is better)
Translates to: RLATEAMWCGSGLLS*GLTDLAVLLSTIFL
Trigger: GAGGAAAATGGTACTCAATAACACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCCTCAGTGGCTAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR TCA 90 bp TGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATGCCCAGCTGACCCCCAGGTCTaGGCTCTCATCGCTCCATTC +
Preference number: 2 (lower is better)
Translates to: CGIRWHQKNSTVMSSPCPADPQV*ALIAPF
Trigger: GAATGGAGCGATGAGAGCTCAGACCTGGGGGTCAGC...TGGGCATGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR GCA 90 bp CACCACTGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCAGCCCAAGTGGCCCTTTaGTGCCAGCACAACTCAGGT +
Preference number: 2 (lower is better)
Translates to: HHCGIRWHQKNSTVMSSPAQVAL*CQHNSG
Trigger: ACCTGAGTTGTGCTGGCAGCAAAGGGCCACTTGGGC...TGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CCA 90 bp TCCTGGTCTGGAGCCAACCACTCTCAGATCCCCACAAGGAGCCAATTGGCCCAGATACCAGCACCACTGTaGAATAAGGTGGCACCAAAA +
Preference number: 2 (lower is better)
Translates to: SWSGANHSQIPTRSQLAQIPAPL*NKVAPK
Trigger: TTTTGGTGCCACCTTATTCCACAGTGGTGCTGGTAT...CTGGGCCAATTGGCTCCTTGTGGGGATCTGAGAGTGGTTGGCTCCAGACCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR GCA 90 bp TGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATGCCCACAAGTGGCCCTTTGCTaGCAGCACAACTCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: CGIRWHQKNSTVMSSPCPQVALC*QHNSGL
Trigger: GAGACCTGAGTTGTGCTGGCAGCAAAGGGCCACTTG...TGGGCATGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR GCA 90 bp TCAGATTTCCTGGAGTCTTCTGCTCAGCTCCAAGCTGAAGTGCACTGGAGACCCTCTGTCCTTGATTCCTaGCAGGACCATCACCTTCCA +
Preference number: 2 (lower is better)
Translates to: SDFLESSAQLQAEVHWRPSVLDS*QDHHLP
Trigger: TGGAAGGTGATGGTCCTGGCAGGAATCAAGGACAGA...GGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAGGAAATCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CCA 90 bp CACCACTGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCAGCTACTTGGGAATACTaGACACCCCAGGCTAGCCAC +
Preference number: 2 (lower is better)
Translates to: HHCGIRWHQKNSTVMSSPATWEY*TPQASH
Trigger: GTGGCTAGCCTGGGGTGTCCAGTATTCCCAAGTAGC...TGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR GCA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAAGTGACTATGGAAATCTaGAAGTGGTCACATTATCCA +
Preference number: 2 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKVTMEI*KWSHYP
Trigger: TGGATAATGTGACCACTTGCAGATTTCCATAGTCAC...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CAA 90 bp TTTAATATGGTACAGCAGGATTTTTCCAAACCAGAGCTGATGTCCTaGGCTCTGGGCACACCTCCTTCCGGTGGTCCAAAGGACATCCTC +
Preference number: 2 (lower is better)
Translates to: FNMVQQDFSKPELMS*ALGTPPSGGPKDIL
Trigger: GAGGATGTCCTTTGGACCACCGGAAGGAGGTGTGCCCAGAGCCAAGGACATCAGCTCTGGTTTGGAAAAATCCTGCTGTACCATATTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CCA 90 bp TCAGATTTCCTGGAGTCTTCTGCTCAGCTCCAAGCTGAAGTGCACTGGAGACCCTCTGCTCTCTCAACCTaGTATCAAAGTGTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: SDFLESSAQLQAEVHWRPSALST*YQSVLR
Trigger: TCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA...GGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAGGAAATCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CCA 90 bp CACCACTGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCAACCCCAGGTTCACTGTaGCGAGAGCATGTTCAGATT +
Preference number: 2 (lower is better)
Translates to: HHCGIRWHQKNSTVMSSPTPGSL*REHVQI
Trigger: AATCTGAACATGCTCTCGCCACAGTGAACCTGGGGT...TGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR GCA 90 bp AAAATGCCTGTATATCGACTCTTGGTGAATAGTTTAGGAAAGAACGCTTTCCGTGTGCTGAGACCTGGCTaGCTGTCACCAGCTGACCCC +
Preference number: 2 (lower is better)
Translates to: KMPVYRLLVNSLGKNAFRVLRPG*LSPADP
Trigger: GGGGTCAGCTGGTGACAGGCAGCCAGGTCTCAGCAC...ACGGAAAGCGTTCTTTCCTAAACTATTCACCAAGAGTCGATATACAGGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CCA 90 bp TGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATGCCCACATGTTCAGATTTCCTaGAGTCTTCTGCTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: CGIRWHQKNSTVMSSPCPHVQIS*SLLLSS
Trigger: GGAGCTGAGCAGAAGACTCCAGGAAATCTGAACATG...TGGGCATGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR TCA 90 bp AAAATGCCTGTATATCGACTCTTGGTGAATAGTTTAGGAAAGAACGCTTTCCGTGAAAGCCTTCACCTCTaGGCCATGCCAGAGGCCACC +
Preference number: 2 (lower is better)
Translates to: KMPVYRLLVNSLGKNAFRESLHL*AMPEAT
Trigger: GGTGGCCTCTGGCATGGCTCAGAGGTGAAGGCTTTC...ACGGAAAGCGTTCTTTCCTAAACTATTCACCAAGAGTCGATATACAGGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR GCA 90 bp AAAATGCCTGTATATCGACTCTTGGTGAATAGTTTAGGAAAGAACGCTTTCCGTAGACAGTGGCAGGGCTaGTGCCTAGAGGAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: KMPVYRLLVNSLGKNAFRRQWQG*CLEESG
Trigger: CCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCT...ACGGAAAGCGTTCTTTCCTAAACTATTCACCAAGAGTCGATATACAGGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CCA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCAATGGAAATCTGCAAGTaGTCACATTATCCAGACCAT +
Preference number: 2 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPMEICK*SHYPDH
Trigger: ATGGTCTGGATAATGTGACCACTTGCAGATTTCCAT...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR TCA 90 bp AAAATGCCTGTATATCGACTCTTGGTGAATAGTTTAGGAAAGAACGCTTTCCGTTGCTCAGCTCCAAGCTaGAGTGCACTGGAGACCCAT +
Preference number: 2 (lower is better)
Translates to: KMPVYRLLVNSLGKNAFRCSAPS*SALETH
Trigger: ATGGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCA...ACGGAAAGCGTTCTTTCCTAAACTATTCACCAAGAGTCGATATACAGGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR TCA 90 bp GTGAATAGTTTAGGAAAGAACGCTTTCCGTACAGAACCTGTACTGTTCAACATAGGTCCTTTCCATCTCTaGCACCCCAGGTTCACTGTG +
Preference number: 2 (lower is better)
Translates to: VNSLGKNAFRTEPVLFNIGPFHL*HPRFTV
Trigger: CACAGTGAACCTGGGGTGTCAGAGATGGAAAGGACC...TATGTTGAACAGTACAGGTTCTGTACGGAAAGCGTTCTTTCCTAAACTATTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR TCA 90 bp AAAATGCCTGTATATCGACTCTTGGTGAATAGTTTAGGAAAGAACGCTTTCCGTAGAGGTGACCTAGCATaGCTCAGATGCTGCAAGTGG +
Preference number: 2 (lower is better)
Translates to: KMPVYRLLVNSLGKNAFRRGDLA*LRCCKW
Trigger: CCACTTGCAGCATCTGAGTCATGCTAGGTCACCTCT...ACGGAAAGCGTTCTTTCCTAAACTATTCACCAAGAGTCGATATACAGGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR TCA 90 bp AAAATGCCTGTATATCGACTCTTGGTGAATAGTTTAGGAAAGAACGCTTTCCGTAGAGTGAACATAAGCTaGAAGATCCTGGTCTGGAGC +
Preference number: 2 (lower is better)
Translates to: KMPVYRLLVNSLGKNAFRRVNIS*KILVWS
Trigger: GCTCCAGACCAGGATCTTTCAGCTTATGTTCACTCT...ACGGAAAGCGTTCTTTCCTAAACTATTCACCAAGAGTCGATATACAGGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR TCA 90 bp AAAATGCCTGTATATCGACTCTTGGTGAATAGTTTAGGAAAGAACGCTTTCCGTACCTGGCTGTGTTATTaGGTACCATTTTCCTCAGAT +
Preference number: 2 (lower is better)
Translates to: KMPVYRLLVNSLGKNAFRTWLCY*VPFSSD
Trigger: ATCTGAGGAAAATGGTACTCAATAACACAGCCAGGT...ACGGAAAGCGTTCTTTCCTAAACTATTCACCAAGAGTCGATATACAGGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CAA 90 bp AAGAAAGACTTTTGTGCTACCAAGAAAATGCCTGTATATCGACTCTaGGTGAATAGTTTAGGAAAGAACGCTTTCCGTACAGAACCTGTA +
Preference number: 2 (lower is better)
Translates to: KKDFCATKKMPVYRL*VNSLGKNAFRTEPV
Trigger: TACAGGTTCTGTACGGAAAGCGTTCTTTCCTAAACTATTCACCAAGAGTCGATATACAGGCATTTTCTTGGTAGCACAAAAGTCTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CAA 90 bp TGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGAGTGGGTTGCTGAGCTaGGGGCTCACAGACCTGGCT +
Preference number: 3 (lower is better)
Translates to: WQGCCLEESGQCVLRGKRSGLLS*GLTDLA
Trigger: AGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACT...CCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CAA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAATGCCCAAGTGGCCCTTaGCTGCCAGCACAACTCAGG +
Preference number: 3 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKCPSGP*LPAQLR
Trigger: CCTGAGTTGTGCTGGCAGCAAAGGGCCACTTGGGCA...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR TCA 72 bp TCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCAGCTaGCCCCCAGGTCTGAGCTCTCATCGCTCCATTCTC +
Preference number: 3 (lower is better)
Translates to: SKCAETWLPVTS*PPGLSSHRSIL
Trigger: GAGAATGGAGCGATGAGAGCTCAGACCTGGGGGTCAGCTGGTGACAGGCAGCCAGGTCTCAGCACACTTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR GCA 72 bp GGATCCCCTGTAGACAGGGTTCCATCTCCTCCCCAGTaGAATCTGCCATGCTGGACAGCTCTGTCCATACGC +
Preference number: 3 (lower is better)
Translates to: GSPVDRVPSPPQ*NLPCWTALSIR
Trigger: GCGTATGGACAGAGCTGTCCAGCATGGCAGATTGCACTGGGGAGGAGATGGAACCCTGTCTACAGGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CCA 72 bp AATACTGGACACCCCAGGCTAGCCACTGAGGCAATGTaGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACA +
Preference number: 3 (lower is better)
Translates to: NTGHPRLATEAM*CGSGLLSLGLT
Trigger: TGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCCTCAGTGGCTAGCCTGGGGTGTCCAGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CCA 72 bp GTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTaGGCAGTGTGTACTGAGGGGCAAGAGGGAAAAGCC +
Preference number: 3 (lower is better)
Translates to: VKTVAGLLPRGE*AVCTEGQEGKA
Trigger: GGCTTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR TCA 72 bp GACTTGAGTAGGGGCAGGTGGCAGCACCAAGGTCTCTaGTATCTGTCCCTTAGCCCAGCAGAGCTGAGAACC +
Preference number: 3 (lower is better)
Translates to: DLSRGRWQHQGL*YLSLSPAELRT
Trigger: GGTTCTCAGCTCTGCTGGGCTAAGGGACAGATATCAGAGACCTTGGTGCTGCCACCTGCCCCTACTCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR GCA 72 bp GACAGGGTTCCATCTCCTCCCCAGTGCAATCTGCCATaGTGGACAGCTCTGTCCATACGCCAGCTCCTAAAC +
Preference number: 3 (lower is better)
Translates to: DRVPSPPQCNLP*WTALSIRQLLN
Trigger: GTTTAGGAGCTGGCGTATGGACAGAGCTGTCCAGCATGGCAGATTGCACTGGGGAGGAGATGGAACCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR GCA 72 bp GGGGGCTGGCTGGACACCAATCTGAACGAGGTTCTGTaGATCGTAACTCAGTCCATTTCTCTCCGCAGACCC +
Preference number: 3 (lower is better)
Translates to: GGWLDTNLNEVL*IVTQSISLRRP
Trigger: GGGTCTGCGGAGAGAAATGGACTGAGTTACGATGCACAGAACCTCGTTCAGATTGGTGTCCAGCCAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CCA 72 bp GACCATCTCCTAGGTGGGTTCAGACTCCTGCCCAAGTaGCCCTTTGCTGCCAGCACAACTCAGGTCTCTTTG +
Preference number: 3 (lower is better)
Translates to: DHLLGGFRLLPK*PFAASTTQVSL
Trigger: CAAAGAGACCTGAGTTGTGCTGGCAGCAAAGGGCCACTTGGGCAGGAGTCTGAACCCACCTAGGAGATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR TCA 72 bp AGATGCTGCAAGTGGTGGCAGGAAAGCCTTCACCTCTaGGCCATGCCAGAGGCCACCTCTTCTCTCTTCATC +
Preference number: 3 (lower is better)
Translates to: RCCKWWQESLHL*AMPEATSSLFI
Trigger: GATGAAGAGAGAAGAGGTGGCCTCTGGCATGGCTCAGAGGTGAAGGCTTTCCTGCCACCACTTGCAGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CAA 90 bp TTCACTTCACCCTCTCGCAGAGTCAGAGGGGGCTGGCTGGACACCAATCTGAACACAACTCAGGTCTCTTaGTATGGTCCCCATGCCTAC +
Preference number: 3 (lower is better)
Translates to: FTSPSRRVRGGWLDTNLNTTQVS*YGPHAY
Trigger: GTAGGCATGGGGACCATACAAAGAGACCTGAGTTGT...GTTCAGATTGGTGTCCAGCCAGCCCCCTCTGACTCTGCGAGAGGGTGAAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR TCA 72 bp ACTCAGGTCTCTTTGTATGGTCCCCATGCCTACCGATaGGGCACAGATAGGAGAGAAGCACCCAAGAGGAGG +
Preference number: 3 (lower is better)
Translates to: TQVSLYGPHAYR*GTDRREAPKRR
Trigger: CCTCCTCTTGGGTGCTTCTCTCCTATCTGTGCCTCATCGGTAGGCATGGGGACCATACAAAGAGACCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CAA 90 bp CCACATGTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGGACCTGGCTGTGTTATaGAGTACCATTTTCCTCAGA +
Preference number: 3 (lower is better)
Translates to: PHVAGSVKTVAGLLPRGEDLAVL*STIFLR
Trigger: TCTGAGGAAAATGGTACTCAATAACACAGCCAGGTC...CTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCACATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR TCA 72 bp ACCCTGCTTCTCTATCACAAGTGGGTCAGCAAGAGGTaGCCTAGCATGACTCAGATGCTGCAAGTGGTGGCA +
Preference number: 3 (lower is better)
Translates to: TLLLYHKWVSKR*PSMTQMLQVVA
Trigger: TGCCACCACTTGCAGCATCTGAGTCATGCTAGGTCACCTCTTGCTGACCCACTTGTGATAGAGAAGCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR GCA 72 bp ATTTCCTGGAGTCTTCTGCTCAGCTCCAAGCTGAAGTaGACTGGAGACCCATTGTACAGCCTCAGGTCTGTG +
Preference number: 3 (lower is better)
Translates to: ISWSLLLSSKLK*TGDPLYSLRSV
Trigger: CACAGACCTGAGGCTGTACAATGGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR GCA 72 bp TGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATaGCCACATGTGGCTGGCAGTGTAAAGACAGTGGCA +
Preference number: 3 (lower is better)
Translates to: WHQKNSTVMSSP*PHVAGSVKTVA
Trigger: TGCCACTGTCTTTACACTGCCAGCCACATGTGGGCATGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CCA 72 bp CTGGAGTCTTCTGCTCAGCTCCAAGCTGAAGTGCACTaGAGACCCATTGTACAGCCTCAGGTCTGTGAACTT +
Preference number: 3 (lower is better)
Translates to: LESSAQLQAEVH*RPIVQPQVCEL
Trigger: AAGTTCACAGACCTGAGGCTGTACAATGGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CCA 72 bp CCAGGTTCACTGTGGCGAGAGCATGTTCAGATTTCCTaGAGTCTTCTGCTCAGCTCCAAGCTGAAGTGCACT +
Preference number: 3 (lower is better)
Translates to: PGSLWREHVQIS*SLLLSSKLKCT
Trigger: AGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAGGAAATCTGAACATGCTCTCGCCACAGTGAACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CCA 72 bp CTCCCCAGAAGAGGTCTTTTCTCTGACACTCGCAACTaGAGCCACTATGTCTTAAGAGGCATGGTCCCACAG +
Preference number: 3 (lower is better)
Translates to: LPRRGLFSDTRN*SHYVLRGMVPQ
Trigger: CTGTGGGACCATGCCTCTTAAGACATAGTGGCTCCAGTTGCGAGTGTCAGAGAAAAGACCTCTTCTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CAA 90 bp CACCACTGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATGCACTGGAGACCCATaGTACAGCCTCAGGTCTGTG +
Preference number: 3 (lower is better)
Translates to: HHCGIRWHQKNSTVMSSPCTGDP*YSLRSV
Trigger: CACAGACCTGAGGCTGTACAATGGGTCTCCAGTGCA...TGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CAA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCACAGAGCAAAGCACAGTaGAGTCCTGTAATCTCAGGA +
Preference number: 3 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPQSKAQ*SPVISG
Trigger: TCCTGAGATTACAGGACTCAACTGTGCTTTGCTCTG...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR TCA 72 bp TCTATCACAAGTGGGTCAGCAAGAGGTGACCTAGCATaGCTCAGATGCTGCAAGTGGTGGCAGGAAAGCCTT +
Preference number: 3 (lower is better)
Translates to: SITSGSARGDLA*LRCCKWWQESL
Trigger: AAGGCTTTCCTGCCACCACTTGCAGCATCTGAGTCATGCTAGGTCACCTCTTGCTGACCCACTTGTGATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR GCA 72 bp TGCATCGTAACTCAGTCCATTTCTCTCCGCAGACCCTaGTTCTCTATCACAAGTGGGTCAGCAAGAGGTGAC +
Preference number: 3 (lower is better)
Translates to: CIVTQSISLRRP*FSITSGSARGD
Trigger: GTCACCTCTTGCTGACCCACTTGTGATAGAGAAGCAGGGTCTGCGGAGAGAAATGGACTGAGTTACGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CCA 72 bp AAGGTCCTTTCCATCTCTGACACCCCAGGTTCACTGTaGCGAGAGCATGTTCAGATTTCCTGGAGTCTTCTG +
Preference number: 3 (lower is better)
Translates to: KVLSISDTPGSL*REHVQISWSLL
Trigger: CAGAAGACTCCAGGAAATCTGAACATGCTCTCGCCACAGTGAACCTGGGGTGTCAGAGATGGAAAGGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CCA 72 bp ACCCATTGGGCATACCAGCACCACTGTGGAATAAGGTaGCACCAAAAGAATTCCACAGTCATGAGCAGCCCA +
Preference number: 3 (lower is better)
Translates to: THWAYQHHCGIR*HQKNSTVMSSP
Trigger: TGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTGCTGGTATGCCCAATGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR TCA 72 bp GGGCATCGGAGCTATTTGCTCAGAGTGAACATAAGCTaGAAGATCCTGGTCTGGAGCCAACCACTCTCAGAT +
Preference number: 3 (lower is better)
Translates to: GHRSYLLRVNIS*KILVWSQPLSD
Trigger: ATCTGAGAGTGGTTGGCTCCAGACCAGGATCTTTCAGCTTATGTTCACTCTGAGCAAATAGCTCCGATGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CAA 90 bp AAAATGCCTGTATATCGACTCTTGGTGAATAGTTTAGGAAAGAACGCTTTCCGTGGGCTGCAGGTAGACTaGAGTAGGGGCAGGTGGCAG +
Preference number: 3 (lower is better)
Translates to: KMPVYRLLVNSLGKNAFRGLQVD*SRGRWQ
Trigger: CTGCCACCTGCCCCTACTCAAGTCTACCTGCAGCCC...ACGGAAAGCGTTCTTTCCTAAACTATTCACCAAGAGTCGATATACAGGCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR TCA 72 bp CCAACAGGACAGATGAGCCTTTCAATCAAAGGCCCCTaGCTCAGTGACAATGCTGACCAACAGAAAGGACAA +
Preference number: 3 (lower is better)
Translates to: PTGQMSLSIKGP*LSDNADQQKGQ
Trigger: TTGTCCTTTCTGTTGGTCAGCATTGTCACTGAGTCAGGGGCCTTTGATTGAAAGGCTCATCTGTCCTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR TCA 72 bp CTCAGTGGAGATGTCAACTACAATGATTACTTCTACTaGTGGGCTCCAGGCACAGAGCAAAGCACAGTTGAG +
Preference number: 3 (lower is better)
Translates to: LSGDVNYNDYFY*WAPGTEQSTVE
Trigger: CTCAACTGTGCTTTGCTCTGTGCCTGGAGCCCATCAGTAGAAGTAATCATTGTAGTTGACATCTCCACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR TCA 72 bp ACAAGAAAGAGCCAGCTATTAAGCCAACAGGACAGATaGGCCTTTCAATCAAAGGCCCCTGACTCAGTGACA +
Preference number: 3 (lower is better)
Translates to: TRKSQLLSQQDR*AFQSKAPDSVT
Trigger: TGTCACTGAGTCAGGGGCCTTTGATTGAAAGGCTCATCTGTCCTGTTGGCTTAATAGCTGGCTCTTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR-3UTR CAA 90 bp CACCACTGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCACCGTATATTTTGAAATaGAAAGAACCTAGTGGGGAA +
Preference number: 3 (lower is better)
Translates to: HHCGIRWHQKNSTVMSSPPYILK*KEPSGE
Trigger: TTCCCCACTAGGTTCTTTCAATTTCAAAATATACGG...TGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR GCA 72 bp TGCCACTTAATGTATCTGAAAGTGACTATGGAAATCTaGAAGTGGTCACATTATCCAGACCATCTCCTAGGT +
Preference number: 3 (lower is better)
Translates to: CHLMYLKVTMEI*KWSHYPDHLLG
Trigger: ACCTAGGAGATGGTCTGGATAATGTGACCACTTGCAGATTTCCATAGTCACTTTCAGATACATTAAGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CCA 72 bp TTAATGTATCTGAAAGTGACTATGGAAATCTGCAAGTaGTCACATTATCCAGACCATCTCCTAGGTGGGTTC +
Preference number: 3 (lower is better)
Translates to: LMYLKVTMEICK*SHYPDHLLGGF
Trigger: GAACCCACCTAGGAGATGGTCTGGATAATGTGACCACTTGCAGATTTCCATAGTCACTTTCAGATACATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR TCA 72 bp ATGTACAACTCAGAGAACTTTCCAATAGGTATTTGCTaGAATGAACTGAGCCAAAGACATTCAACATTCATG +
Preference number: 3 (lower is better)
Translates to: MYNSENFPIGIC*NELSQRHSTFM
Trigger: CATGAATGTTGAATGTCTTTGGCTCAGTTCATTTCAGCAAATACCTATTGGAAAGTTCTCTGAGTTGTACAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TTCACTTCACCCTCTCGCAGAGTCAGAGGGGGCTGGCTGGACACCAATCTGAACAGTGGGTGCTCCTGGTaGGGGCCCCCTCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: FTSPSRRVRGGWLDTNLNSGCSW*GPPPGR
Trigger: TCTACCTGGAGGGGGCCCTCACCAGGAGCACCCACT...GTTCAGATTGGTGTCCAGCCAGCCCCCTCTGACTCTGCGAGAGGGTGAAGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp TGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGATGTGGACACGGCATTaGAGTCCTGCCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: WQGCCLEESGQCVLRGKRMWTRH*SPAWAW
Trigger: CCAAGCCCAGGCAGGACTGCAATGCCGTGTCCACAT...CCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGCATTGCAGTCCTGCCTaGGCTTGGGGATGTACCCTG +
Preference number: 4 (lower is better)
Translates to: WQGCCLEESGQCVLRGKRHCSPA*AWGCTL
Trigger: CAGGGTACATCCCCAAGCCCAGGCAGGACTGCAATG...CCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGCAGAATGGCATTTCTaGAGCTGCCGTGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: WQGCCLEESGQCVLRGKRAEWHF*SCRGSP
Trigger: TGGTGAGCCACGGCAGCTTCAGAAATGCCATTCTGC...CCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp GTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAAGGGCACTCCCAGCATaGAGCTCTCCACCGTCATCA +
Preference number: 4 (lower is better)
Translates to: VAGSVKTVAGLLPRGEWARALPA*SSPPSS
Trigger: TGATGACGGTGGAGAGCTGCATGCTGGGAGTGCCCT...TGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp CCACATGTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGGTGCATAGCGCCCACTaGAGATGGCCCCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: PHVAGSVKTVAGLLPRGEVHSAH*RWPLSS
Trigger: ACTGGAGAGGGGCCATCTGCAGTGGGCGCTATGCAC...CTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCACATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp GGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACCTGGCTGTGCTTGCTGCCCAGTTTaGTCATTGCCTTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: GNVVWQWVAELGAHRPGCACCPV*SLPSGL
Trigger: CAGCCCGGAAGGCAATGACCAAACTGGGCAGCAAGC...ACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp GGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACCTGGCTGTTTCCCGAGGTTTCAGTaGGTCTGCGTCCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GNVVWQWVAELGAHRPGCFPRFQ*VCVLVR
Trigger: CCTCACCAGGACGCAGACCCACTGAAACCTCGGGAA...ACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAAAGGGTCCTTCCACTGTaGTCCAAGCCACCTGGACCC +
Preference number: 4 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKRVLPL*SKPPGP
Trigger: GGGTCCAGGTGGCTTGGACCACAGTGGAAGGACCCT...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp GTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAGGCCCCTCTCCAGTCTaGGACATTGATGCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: VAGSVKTVAGLLPRGEWAGPSPV*DIDAVW
Trigger: CCAGACTGCATCAATGTCCCAGACTGGAGAGGGGCC...TGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp GCCACTGAGGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACTGGAGCCATGGACAGTaGTGCAGCGGGAGAATGTGT +
Preference number: 4 (lower is better)
Translates to: ATEAMWCGSGLLSLGLTDWSHGQ*CSGRMC
Trigger: ACACATTCTCCCGCTGCATCACTGTCCATGGCTCCA...GTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCCTCAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAATGGCTGTGCAGTCGCTaGTGCCTGCATTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKWLCSR*CLHSLG
Trigger: TCCCAAGGAATGCAGGCATCAGCGACTGCACAGCCA...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAAACGGCATTGCAGTCCTaGCTGGGCTTGGGGATGTAC +
Preference number: 4 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKTALQS*LGLGMY
Trigger: GTACATCCCCAAGCCCAGGCAGGACTGCAATGCCGT...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp GCCACTGAGGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACTCCACGCCCTCCAAGTaGGCTGCTTTAAACCCCAGT +
Preference number: 4 (lower is better)
Translates to: ATEAMWCGSGLLSLGLTDSTPSK*AALNPS
Trigger: ACTGGGGTTTAAAGCAGCCCACTTGGAGGGCGTGGA...GTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCCTCAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp GGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACCTGGCTGTAAGCTTTCCTCCCCCTaGGATAGTGATGGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: GNVVWQWVAELGAHRPGCKLSSP*DSDGVD
Trigger: GTCCACTCCATCACTATCTCAGGGGGAGGAAAGCTT...ACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TCCTGGTCTGGAGCCAACCACTCTCAGATCCCCACAAGGAGCCAATTGGCCCAGCTGGCCCATCTTCAGTaGAGAAGCAGTGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SWSGANHSQIPTRSQLAQLAHLQ*RSSGPK
Trigger: CTTTGGGCCACTGCTTCTTCACTGAAGATGGGCCAG...CTGGGCCAATTGGCTCCTTGTGGGGATCTGAGAGTGGTTGGCTCCAGACCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp CCACATGTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGCAGGTGGAAGTGAATTaGGTACTGGCCCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: PHVAGSVKTVAGLLPRGEQVEVN*VLAHQL
Trigger: CAGCTGGTGGGCCAGTACCCAATTCACTTCCACCTG...CTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCACATGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TTCACTTCACCCTCTCGCAGAGTCAGAGGGGGCTGGCTGGACACCAATCTGAACGGAAGGTTCCACCACTaGCCAGGGTCAGACCAATGC +
Preference number: 4 (lower is better)
Translates to: FTSPSRRVRGGWLDTNLNGRFHH*PGSDQC
Trigger: GCATTGGTCTGACCCTGGCCAGTGGTGGAACCTTCC...GTTCAGATTGGTGTCCAGCCAGCCCCCTCTGACTCTGCGAGAGGGTGAAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp GTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAGGAGCCATCATCATATaGGAAGGTTCCACCACTGGC +
Preference number: 4 (lower is better)
Translates to: VAGSVKTVAGLLPRGEWAGAIII*EGSTTG
Trigger: GCCAGTGGTGGAACCTTCCCATATGATGATGGCTCC...TGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TCCTGGTCTGGAGCCAACCACTCTCAGATCCCCACAAGGAGCCAATTGGCCCAGCAGCACCCTGGTCCATaGGCCTCTGGTGATGTATCT +
Preference number: 4 (lower is better)
Translates to: SWSGANHSQIPTRSQLAQQHPGP*ASGDVS
Trigger: AGATACATCACCAGAGGCCCATGGACCAGGGTGCTG...CTGGGCCAATTGGCTCCTTGTGGGGATCTGAGAGTGGTTGGCTCCAGACCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CAA 72 bp AGGCTAGCCACTGAGGCAATGTGGTGTGGCAGTGGGTaGCTGAGCTTGGGGCTCACAGACCTGGCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: RLATEAMWCGSG*LSLGLTDLAVL
Trigger: TAACACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCCTCAGTGGCTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAACTGTGGCAGAAGAGGTaGGCAGTAGTTTCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKLWQKR*AVVSCH
Trigger: ATGGCAGGAAACTACTGCTCACCTCTTCTGCCACAG...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TTCACTTCACCCTCTCGCAGAGTCAGAGGGGGCTGGCTGGACACCAATCTGAACAGACAACCTCAGTGCTaGGGGCGACTCCATCCATTG +
Preference number: 4 (lower is better)
Translates to: FTSPSRRVRGGWLDTNLNRQPQC*GRLHPL
Trigger: CAATGGATGGAGTCGCCCTCAGCACTGAGGTTGTCT...GTTCAGATTGGTGTCCAGCCAGCCCCCTCTGACTCTGCGAGAGGGTGAAGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TCAGATTTCCTGGAGTCTTCTGCTCAGCTCCAAGCTGAAGTGCACTGGAGACCCCCAGCCAGGTGGAAGTaGATTGGGTACTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: SDFLESSAQLQAEVHWRPPARWK*IGYWPT
Trigger: GGTGGGCCAGTACCCAATTCACTTCCACCTGGCTGG...GGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAGGAAATCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TCCTGGTCTGGAGCCAACCACTCTCAGATCCCCACAAGGAGCCAATTGGCCCAGAGCCCACAACATCCTTaGTCAACAGACCGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SWSGANHSQIPTRSQLAQSPQHP*STDRWS
Trigger: GCTCCAACGGTCTGTTGATCAAGGATGTTGTGGGCT...CTGGGCCAATTGGCTCCTTGTGGGGATCTGAGAGTGGTTGGCTCCAGACCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGATGTATCTGCCCTTTaGTGCCATGAGCACTATGGA +
Preference number: 4 (lower is better)
Translates to: WQGCCLEESGQCVLRGKRDVSAL*CHEHYG
Trigger: TCCATAGTGCTCATGGCATCAAAGGGCAGATACATC...CCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp CCACATGTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGGCCCTCCAAGTGGGCTaGTTTAAACCCCAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: PHVAGSVKTVAGLLPRGEALQVG*FKPQCK
Trigger: TTTGCACTGGGGTTTAAAGCAGCCCACTTGGAGGGC...CTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCACATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCATGGCCCACCAGCTGCTaGCCCATGTACTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPWPTSC*PMYFSS
Trigger: GGAGCTGAAGTACATGGGGCAGCAGCTGGTGGGCCA...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp GGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACCTGGCTGTAGTAGTAGTGGCTCCTaGCAGGATAGCTCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: GNVVWQWVAELGAHRPGCSSSGS*QDSSAQ
Trigger: TTGAGCAGAGCTATCCTGGCAGGAGCCACTACTACT...ACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp GCCACTGAGGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACCGAAGGTGGAAGAAGTaGTGCCTGGAACTTTCCATC +
Preference number: 4 (lower is better)
Translates to: ATEAMWCGSGLLSLGLTDRRWKK*CLELSI
Trigger: GATGGAAAGTTCCAGGCAGCACTTCTTCCACCTTCG...GTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCCTCAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp GTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCACTTGAGACCTTTGTCTaGCCCAAGCTTTTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: VAGSVKTVAGLLPRGEWALETFV*PKLFQH
Trigger: GTGCTGGAAAAGCTTGGGGCAGACAAAGGTCTCAAG...TGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp GGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACCTGGCTGTGAGATAGTGATGGAGTaGACTGTGGCAGAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GNVVWQWVAELGAHRPGCEIVME*TVAEEV
Trigger: CACCTCTTCTGCCACAGTCCACTCCATCACTATCTC...ACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAAAGGAGGCCAAGGCAGTaGTCAAAAGTGTTGCGTTCC +
Preference number: 4 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKRRPRQ*SKVLRS
Trigger: GGAACGCAACACTTTTGACCACTGCCTTGGCCTCCT...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TCCTGGTCTGGAGCCAACCACTCTCAGATCCCCACAAGGAGCCAATTGGCCCAGCCCCAAAGAGCTTCCTaGGCATTGGCACATCCACTA +
Preference number: 4 (lower is better)
Translates to: SWSGANHSQIPTRSQLAQPQRAS*ALAHPL
Trigger: TAGTGGATGTGCCAATGCCCAGGAAGCTCTTTGGGG...CTGGGCCAATTGGCTCCTTGTGGGGATCTGAGAGTGGTTGGCTCCAGACCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TCAGATTTCCTGGAGTCTTCTGCTCAGCTCCAAGCTGAAGTGCACTGGAGACCCCTGTCTGGAACAGTTTaGAAACCCGGGCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SDFLESSAQLQAEVHWRPLSGTV*KPGQQP
Trigger: CGGCTGCTGCCCGGGTTTTCAAACTGTTCCAGACAG...GGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAGGAAATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TTCACTTCACCCTCTCGCAGAGTCAGAGGGGGCTGGCTGGACACCAATCTGAACTCCCCACCTTTGCTCTaGGGCACCTTATCATGGTCA +
Preference number: 4 (lower is better)
Translates to: FTSPSRRVRGGWLDTNLNSPPLL*GTLSWS
Trigger: TGACCATGATAAGGTGCCTCAGAGCAAAGGTGGGGA...GTTCAGATTGGTGTCCAGCCAGCCCCCTCTGACTCTGCGAGAGGGTGAAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp GCCACTGAGGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACAGCTGCTCGCAGATCTaGAATTTTCTCCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: ATEAMWCGSGLLSLGLTDSCSQI*NFLPTF
Trigger: AAAGGTGGGGAGAAAATTTCAGATCTGCGAGCAGCT...GTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCCTCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TTCACTTCACCCTCTCGCAGAGTCAGAGGGGGCTGGCTGGACACCAATCTGAACTTGGTCACATTGTTGTaGGGGCAGCTTTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: FTSPSRRVRGGWLDTNLNLVTLL*GQLCQA
Trigger: TGCCTGGCAAAGCTGCCCTCACAACAATGTGACCAA...GTTCAGATTGGTGTCCAGCCAGCCCCCTCTGACTCTGCGAGAGGGTGAAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TCAGATTTCCTGGAGTCTTCTGCTCAGCTCCAAGCTGAAGTGCACTGGAGACCCCTGGATGCCATCTTCTaGGCAAGGGTACCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SDFLESSAQLQAEVHWRPLDAIF*ARVPPP
Trigger: GGGAGGAGGTACCCTTGCTCAGAAGATGGCATCCAG...GGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAGGAAATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCAGTCGGAAGCTGCCTTTaGAGCCGACGAACGCCATCT +
Preference number: 4 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPVGSCL*SRRTPS
Trigger: AGATGGCGTTCGTCGGCTTCAAAGGCAGCTTCCGAC...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAAGTACTGTGGTTTCCCTaGCACCTTGACCTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKVLWFP*HLDLCR
Trigger: TCTACACAGGTCAAGGTGGCAGGGAAACCACAGTAC...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp GCCACTGAGGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACAGTGGTCAAAAGTGTTaGGTTCCTCTGGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: ATEAMWCGSGLLSLGLTDSGQKC*VPLAHL
Trigger: AAGATGGGCCAGAGGAACGCAACACTTTTGACCACT...GTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCCTCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp CCACATGTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGTCCATCATTTCTGTaGCCACATTGCCACTCTCGC +
Preference number: 4 (lower is better)
Translates to: PHVAGSVKTVAGLLPRGECPSFL*PHCHSR
Trigger: GCGAGAGTGGCAATGTGGGCACAGAAATGATGGACA...CTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCACATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp TCCTGGTCTGGAGCCAACCACTCTCAGATCCCCACAAGGAGCCAATTGGCCCAGTGCCAGGGTATGCCCTaGAGAATGGCATTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SWSGANHSQIPTRSQLAQCQGMP*RMAFLK
Trigger: CTTCAGAAATGCCATTCTGCAGGGCATACCCTGGCA...CTGGGCCAATTGGCTCCTTGTGGGGATCTGAGAGTGGTTGGCTCCAGACCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp GCCACTGAGGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACTTGGCATCAATGACATaGACAATGACTCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: ATEAMWCGSGLLSLGLTDLASMT*TMTPRW
Trigger: CCACCGTGGAGTCATTGTCCATGTCATTGATGCCAA...GTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCCTCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp GCCACTGAGGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACAGTGTTGCGTTCCTCTaGCCCATCTTCAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: ATEAMWCGSGLLSLGLTDSVAFL*PIFSEE
Trigger: TTCTTCACTGAAGATGGGCCAGAGGAACGCAACACT...GTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCCTCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCAAGTCCTGCCTGGGCTTaGGGATGTACCCTGGGTATG +
Preference number: 4 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPSPAWA*GCTLGM
Trigger: CATACCCAGGGTACATCCCCAAGCCCAGGCAGGACT...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp CCACATGTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGGAGCCGTCCAGATCATaGAACACAGATGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PHVAGSVKTVAGLLPRGEEPSRS*NTDVLS
Trigger: GGACAAGACATCTGTGTTCCATGATCTGGACGGCTC...CTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCACATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGCCACTTGGAAGATTTTaGCTTTGTGGTCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: WQGCCLEESGQCVLRGKRPLGRF*LCGPQS
Trigger: AGACTGAGGACCACAAAGCCAAAATCTTCCAAGTGG...CCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CAA 72 bp ACTGAGGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTaGGGGCTCACAGACCTGGCTGTGTTATTGAGTACC +
Preference number: 4 (lower is better)
Translates to: TEAMWCGSGLLS*GLTDLAVLLST
Trigger: GGTACTCAATAACACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp TCAGATTTCCTGGAGTCTTCTGCTCAGCTCCAAGCTGAAGTGCACTGGAGACCCATCCTCCCTCCTGCATaGCACCAGGATGAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SDFLESSAQLQAEVHWRPILPPA*HQDEGS
Trigger: AGACCCTTCATCCTGGTGGCATGCAGGAGGGAGGAT...GGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAGGAAATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp TCCTGGTCTGGAGCCAACCACTCTCAGATCCCCACAAGGAGCCAATTGGCCCAGTTTCTGTGCCCACATTaGCACTCTCGCCAACAAACA +
Preference number: 4 (lower is better)
Translates to: SWSGANHSQIPTRSQLAQFLCPH*HSRQQT
Trigger: TGTTTGTTGGCGAGAGTGGCAATGTGGGCACAGAAA...CTGGGCCAATTGGCTCCTTGTGGGGATCTGAGAGTGGTTGGCTCCAGACCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCAGGATGGAAAAGGTGGTaGCTCTTGGGTAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPGWKRW*LLGSRA
Trigger: GGCTCTGCTACCCAAGAGGCACCACCTTTTCCATCC...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp CCACATGTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGAGGTGGAAGAAGTGCTaGCTGGAACTTTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: PHVAGSVKTVAGLLPRGERWKKC*LELSIF
Trigger: GAAGATGGAAAGTTCCAGGCAGCACTTCTTCCACCT...CTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCACATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TCCTGGTCTGGAGCCAACCACTCTCAGATCCCCACAAGGAGCCAATTGGCCCAGAGTGCAAACTTGATGTaGCCCCCAAAGGTATCGAAG +
Preference number: 4 (lower is better)
Translates to: SWSGANHSQIPTRSQLAQSANLM*PPKVSK
Trigger: CTTCGATACCTTTGGGGGCCACATCAAGTTTGCACT...CTGGGCCAATTGGCTCCTTGTGGGGATCTGAGAGTGGTTGGCTCCAGACCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCACGGAAGGTGCAGTTCTaGATGTTGATGGGGCCATCG +
Preference number: 4 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPRKVQF*MLMGPS
Trigger: CGATGGCCCCATCAACATCCAGAACTGCACCTTCCG...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TCCTGGTCTGGAGCCAACCACTCTCAGATCCCCACAAGGAGCCAATTGGCCCAGAAAGGATGGAAAAGGTaGTGCCTCTTGGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SWSGANHSQIPTRSQLAQKGWKR*CLLGSR
Trigger: TCTGCTACCCAAGAGGCACCACCTTTTCCATCCTTT...CTGGGCCAATTGGCTCCTTGTGGGGATCTGAGAGTGGTTGGCTCCAGACCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TCCTGGTCTGGAGCCAACCACTCTCAGATCCCCACAAGGAGCCAATTGGCCCAGAAGTCATTCCGAAGGTaGAAGAAGTGCTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SWSGANHSQIPTRSQLAQKSFRR*KKCCLE
Trigger: TTCCAGGCAGCACTTCTTCCACCTTCGGAATGACTT...CTGGGCCAATTGGCTCCTTGTGGGGATCTGAGAGTGGTTGGCTCCAGACCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAATTCTCACCACAGGGATaGGCACCACTTGGAAGATTT +
Preference number: 4 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKFSPQG*APLGRF
Trigger: AAATCTTCCAAGTGGTGCCCATCCCTGTGGTGAGAA...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CAA 72 bp CTGCTCAGCTCCAAGCTGAAGTGCACTGGAGACCCATaGTACAGCCTCAGGTCTGTGAACTTCACTTCACCC +
Preference number: 4 (lower is better)
Translates to: LLSSKLKCTGDP*YSLRSVNFTSP
Trigger: GGGTGAAGTGAAGTTCACAGACCTGAGGCTGTACAATGGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TCCTGGTCTGGAGCCAACCACTCTCAGATCCCCACAAGGAGCCAATTGGCCCAGCCCGTTGGCACATGGTaGAAAATGAACCAAAATCCA +
Preference number: 4 (lower is better)
Translates to: SWSGANHSQIPTRSQLAQPVGTW*KMNQNP
Trigger: TGGATTTTGGTTCATTTTTCACCATGTGCCAACGGG...CTGGGCCAATTGGCTCCTTGTGGGGATCTGAGAGTGGTTGGCTCCAGACCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCATCCATGGGCCTCTGGTaGTGTATCTGCCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPSMGLW*CICPLM
Trigger: CATCAAAGGGCAGATACATCACCAGAGGCCCATGGA...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp GTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCATCTTTTCTTTCAACTTaGGACCTTTGTCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: VAGSVKTVAGLLPRGEWASFLST*DLCLPQ
Trigger: TTGGGGCAGACAAAGGTCTCAAGTTGAAAGAAAAGA...TGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp TCAGATTTCCTGGAGTCTTCTGCTCAGCTCCAAGCTGAAGTGCACTGGAGACCCGGTGGAGGAAGTGCTTaGTGCCCAGTTTGGTCATTG +
Preference number: 4 (lower is better)
Translates to: SDFLESSAQLQAEVHWRPGGGSA*CPVWSL
Trigger: CAATGACCAAACTGGGCAGCAAGCACTTCCTCCACC...GGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAGGAAATCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp CCACATGTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTTTTCTCCCCACCTTTaGTCTGAGGCACCTTATCAT +
Preference number: 4 (lower is better)
Translates to: PHVAGSVKTVAGLLPRGEFSPHL*SEAPYH
Trigger: ATGATAAGGTGCCTCAGAGCAAAGGTGGGGAGAAAA...CTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCACATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp GGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACCTGGCTGTCCATGGTATTCAATGTaGTCTTCAACTGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GNVVWQWVAELGAHRPGCPWYSM*SSTEEE
Trigger: CTCCTCTTCAGTTGAAGACCACATTGAATACCATGG...ACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCATCGCCATCCAGAATGTaGACACGGCATTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPSPSRM*TRHCSP
Trigger: AGGACTGCAATGCCGTGTCCACATTCTGGATGGCGA...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCAGACATTGATGCAGTCTaGGTGTCGGACCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPDIDAV*VSDQPV
Trigger: AACTGGCTGGTCCGACACCCAGACTGCATCAATGTC...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAAGATGCCTGCATTCCTTaGGAGCAGAGCTTTAATCTT +
Preference number: 4 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKDACIP*EQSFNL
Trigger: AAGATTAAAGCTCTGCTCCCAAGGAATGCAGGCATC...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TCCTGGTCTGGAGCCAACCACTCTCAGATCCCCACAAGGAGCCAATTGGCCCAGGGAAGAAGTGCTGCCTaGAACTTTCCATCTTCACTT +
Preference number: 4 (lower is better)
Translates to: SWSGANHSQIPTRSQLAQGRSAA*NFPSSL
Trigger: AAGTGAAGATGGAAAGTTCCAGGCAGCACTTCTTCC...CTGGGCCAATTGGCTCCTTGTGGGGATCTGAGAGTGGTTGGCTCCAGACCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAAAATGTGGTCTTCAACTaGAGAGGAGGGATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKNVVFN*RGGISF
Trigger: AAAGGAAATCCCTCCTCTTCAGTTGAAGACCACATT...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TCAGATTTCCTGGAGTCTTCTGCTCAGCTCCAAGCTGAAGTGCACTGGAGACCCGGTATGAGTCCTCTGTaGTCACTTTGCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: SDFLESSAQLQAEVHWRPGMSPL*SLCTSC
Trigger: GCAGGATGTGCAAAGTGATCACAGAGGACTCATACC...GGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAGGAAATCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp CACCACTGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATGTACCTGGCAGAGATaGTGGAGAGGAAGGGCCGTT +
Preference number: 4 (lower is better)
Translates to: HHCGIRWHQKNSTVMSSPCTWQR*WRGRAV
Trigger: AACGGCCCTTCCTCTCCATCATCTCTGCCAGGTACA...TGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATGCCCATCCAGTCTGGGACATTaGTGCAGTCTGGGTGTCGGA +
Preference number: 4 (lower is better)
Translates to: CGIRWHQKNSTVMSSPCPSSLGH*CSLGVG
Trigger: TCCGACACCCAGACTGCATCAATGTCCCAGACTGGA...TGGGCATGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCATCTTTTGTCTTCAGCTaGGCCCCAAAGAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPSFVFS*APKSFL
Trigger: CAGGAAGCTCTTTGGGGCTCAGCTGAAGACAAAAGA...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp TGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATGCCCACCAAGGTGGAGGAAGTaGTTGCTGCCCAGTTTGGTC +
Preference number: 4 (lower is better)
Translates to: CGIRWHQKNSTVMSSPCPPRWRK*LLPSLV
Trigger: GACCAAACTGGGCAGCAAGCACTTCCTCCACCTTGG...TGGGCATGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TCAGATTTCCTGGAGTCTTCTGCTCAGCTCCAAGCTGAAGTGCACTGGAGACCCTGTCTAAATCCAAGGTaGAGGAAGTGCTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SDFLESSAQLQAEVHWRPCLNPR*RKCLLP
Trigger: GGGCAGCAAGCACTTCCTCCACCTTGGATTTAGACA...GGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAGGAAATCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TCAGATTTCCTGGAGTCTTCTGCTCAGCTCCAAGCTGAAGTGCACTGGAGACCCGGGATGGGCACCACTTaGAAGATTTTGGCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: SDFLESSAQLQAEVHWRPGMGTT*KILALW
Trigger: CCACAAAGCCAAAATCTTCCAAGTGGTGCCCATCCC...GGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAGGAAATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp CACCACTGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCAGCAGCCGAGCCTTTGTaGCCATGGTATTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: HHCGIRWHQKNSTVMSSPAAEPL*PWYSMW
Trigger: CCACATTGAATACCATGGTCACAAAGGCTCGGCTGC...TGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAAAACCCATTCGCTGGATaGAGAAACATTGAAATGTTC +
Preference number: 4 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKNPFAG*RNIEMF
Trigger: GAACATTTCAATGTTTCTTCATCCAGCGAATGGGTT...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCAGTCCATTCCACATCTTaGACCCATTCGCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPVHSTS*THSLDE
Trigger: TTCATCCAGCGAATGGGTTCAAGATGTGGAATGGAC...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp TCAGATTTCCTGGAGTCTTCTGCTCAGCTCCAAGCTGAAGTGCACTGGAGACCCTGCCCTTTGATGCCATaGGCACTATGGAATTGTCAG +
Preference number: 4 (lower is better)
Translates to: SDFLESSAQLQAEVHWRPCPLMP*ALWNCQ
Trigger: CTGACAATTCCATAGTGCTCATGGCATCAAAGGGCA...GGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAGGAAATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp TGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATGCCCACCTGCCATCGGGCACTaGATTCAAATACTGGACCAG +
Preference number: 4 (lower is better)
Translates to: CGIRWHQKNSTVMSSPCPPAIGH*IQILDQ
Trigger: CTGGTCCAGTATTTGAATGCAGTGCCCGATGGCAGG...TGGGCATGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAATTGAAATGTTCACCATaGTCTGTCTGGAACAGTTTG +
Preference number: 4 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKLKCSP*SVWNSL
Trigger: CAAACTGTTCCAGACAGAGCATGGTGAACATTTCAA...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp TCCTGGTCTGGAGCCAACCACTCTCAGATCCCCACAAGGAGCCAATTGGCCCAGCTGTTCTTTATCTCCTaGTTGGAGCCATCATCATAT +
Preference number: 4 (lower is better)
Translates to: SWSGANHSQIPTRSQLAQLFFIS*LEPSSY
Trigger: ATATGATGATGGCTCCAAGCAGGAGATAAAGAACAG...CTGGGCCAATTGGCTCCTTGTGGGGATCTGAGAGTGGTTGGCTCCAGACCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CAA 72 bp CAGAGGCCACCTCTTCTCTCTTCATCATCTCTGTCCTaGATTCCTGCCAGGACCATCACCTTCCAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: QRPPLLSSSSLS*IPARTITFQKK
Trigger: CTTCTTCTGGAAGGTGATGGTCCTGGCAGGAATCAAGGACAGAGATGATGAAGAGAGAAGAGGTGGCCTCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp TGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATGCCCACACCCGGAACTCTTCTaGCTGGTACATCGAATAGTC +
Preference number: 4 (lower is better)
Translates to: CGIRWHQKNSTVMSSPCPHPELF*LVHRIV
Trigger: GACTATTCGATGTACCAGGCAGAAGAGTTCCGGGTG...TGGGCATGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TCAGATTTCCTGGAGTCTTCTGCTCAGCTCCAAGCTGAAGTGCACTGGAGACCCCTAATGGGAAAATTCTaGCCAATAGGGAGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SDFLESSAQLQAEVHWRPLMGKF*PIGRVL
Trigger: AAGGACCCTCCCTATTGGCCAGAATTTTCCCATTAG...GGGTCTCCAGTGCACTTCAGCTTGGAGCTGAGCAGAAGACTCCAGGAAATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp CACCACTGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATCACCACTATCTGGATaGCATCTTCTGAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: HHCGIRWHQKNSTVMSSPSPLSG*HLLSKG
Trigger: ACCCTTGCTCAGAAGATGGCATCCAGATAGTGGTGA...TGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp CACCACTGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATCACCATGCTCTGTCTaGAACAGTTTGAAAACCCGG +
Preference number: 4 (lower is better)
Translates to: HHCGIRWHQKNSTVMSSPSPCSV*NSLKTR
Trigger: CCGGGTTTTCAAACTGTTCCAGACAGAGCATGGTGA...TGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp CACCACTGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCACATACAGCACAATACTaGAATTGCCCTCAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: HHCGIRWHQKNSTVMSSPHTAQY*NCPQKG
Trigger: GCCCTTTTGAGGGCAATTTCAGTATTGTGCTGTATG...TGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp ATGTACTCCTTCCATCTGCCACTTAATGTATCTGAAAGTGACTATGGAAATCTGAGCTTCGGCAGGCTCTaGCCCGGGTGTAGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: MYSFHLPLNVSESDYGNLSFGRL*PGCSKQ
Trigger: TTGCTTGCTACACCCGGGGCAGAGCCTGCCGAAGCT...CAGATTTCCATAGTCACTTTCAGATACATTAAGTGGCAGATGGAAGGAGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCATGGCCTGTATATCAATaGGTCGATTGCAGATTTTTC +
Preference number: 4 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPWPVYQ*VDCRFF
Trigger: GAAAAATCTGCAATCGACCCATTGATATACAGGCCA...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATGCCCAGTGCTCAGAATAACCTaGAGAGTACATTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: CGIRWHQKNSTVMSSPCPVLRIT*RVHSHR
Trigger: TCTGTGGGAATGTACTCTCCAGGTTATTCTGAGCAC...TGGGCATGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCAGTAGAATTTACCCAGTaGAATGTGCTCAGAATAACC +
Preference number: 4 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPVEFTQ*NVLRIT
Trigger: GGTTATTCTGAGCACATTCCACTGGGTAAATTCTAC...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp ATGTACTCCTTCCATCTGCCACTTAATGTATCTGAAAGTGACTATGGAAATCTGGTGGTCCAAGCCACCTaGACCCCAGATCCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: MYSFHLPLNVSESDYGNLVVQAT*TPDPVV
Trigger: GACAACAGGATCTGGGGTCCAGGTGGCTTGGACCAC...CAGATTTCCATAGTCACTTTCAGATACATTAAGTGGCAGATGGAAGGAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp TGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATGCCCATCTCACAGCCCTTCATaGAGCAGAAAGCAAATTTCT +
Preference number: 4 (lower is better)
Translates to: CGIRWHQKNSTVMSSPCPSHSPS*SRKQIS
Trigger: AGAAATTTGCTTTCTGCTCCATGAAGGGCTGTGAGA...TGGGCATGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp GTGAATAGTTTAGGAAAGAACGCTTTCCGTACAGAACCTGTACTGTTCAACATAGAGCTTCCTGGGCATTaGCACATCCACTATGGCCCT +
Preference number: 4 (lower is better)
Translates to: VNSLGKNAFRTEPVLFNIELPGH*HIHYGP
Trigger: AGGGCCATAGTGGATGTGCCAATGCCCAGGAAGCTC...TATGTTGAACAGTACAGGTTCTGTACGGAAAGCGTTCTTTCCTAAACTATTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
3UTR CAA 72 bp ATACCACTGGACAAAGGGGACCGAAGCAAATCTTCTTaGAAAAAGAAAGGTTGTGGTTGTGGAGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: IPLDKGDRSKSS*KKKGCGCGGKG
Trigger: CCCCTTTCCTCCACAACCACAACCTTTCTTTTTCAAAGAAGATTTGCTTCGGTCCCCTTTGTCCAGTGGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp ATGTACTCCTTCCATCTGCCACTTAATGTATCTGAAAGTGACTATGGAAATCTGACCCCAGTGCAAACTTaGTGTGGCCCCCAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: MYSFHLPLNVSESDYGNLTPVQT*CGPQRY
Trigger: ATACCTTTGGGGGCCACATCAAGTTTGCACTGGGGT...CAGATTTCCATAGTCACTTTCAGATACATTAAGTGGCAGATGGAAGGAGTACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp GTGAATAGTTTAGGAAAGAACGCTTTCCGTACAGAACCTGTACTGTTCAACATAGGAGGAAGTGCTTGCTaGCCAGTTTGGTCATTGCCT +
Preference number: 4 (lower is better)
Translates to: VNSLGKNAFRTEPVLFNIGGSAC*PVWSLP
Trigger: AGGCAATGACCAAACTGGGCAGCAAGCACTTCCTCC...TATGTTGAACAGTACAGGTTCTGTACGGAAAGCGTTCTTTCCTAAACTATTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp ATGTACTCCTTCCATCTGCCACTTAATGTATCTGAAAGTGACTATGGAAATCTGAGAGCTGCCAGGGTATaGCCTGCAGAATGGCATTTC +
Preference number: 4 (lower is better)
Translates to: MYSFHLPLNVSESDYGNLRAARV*PAEWHF
Trigger: GAAATGCCATTCTGCAGGGCATACCCTGGCAGCTCT...CAGATTTCCATAGTCACTTTCAGATACATTAAGTGGCAGATGGAAGGAGTACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp AAAATGCCTGTATATCGACTCTTGGTGAATAGTTTAGGAAAGAACGCTTTCCGTTGCAGTTCTGGATGTTaGTGGGGCCATCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: KMPVYRLLVNSLGKNAFRCSSGC*WGHRRT
Trigger: AGTTCTACGATGGCCCCATCAACATCCAGAACTGCA...ACGGAAAGCGTTCTTTCCTAAACTATTCACCAAGAGTCGATATACAGGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp GTGAATAGTTTAGGAAAGAACGCTTTCCGTACAGAACCTGTACTGTTCAACATATCATGCGCAGATTGCTaGTCTTGTAGGCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: VNSLGKNAFRTEPVLFNISCADC*SCRPGC
Trigger: ACATCCAGGCCTACAAGAGCAGCAATCTGCGCATGA...TATGTTGAACAGTACAGGTTCTGTACGGAAAGCGTTCTTTCCTAAACTATTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp AAAATGCCTGTATATCGACTCTTGGTGAATAGTTTAGGAAAGAACGCTTTCCGTCACAGAGGGGCCCGTTaGCACATGGTGAAAAATGAA +
Preference number: 4 (lower is better)
Translates to: KMPVYRLLVNSLGKNAFRHRGAR*HMVKNE
Trigger: TTCATTTTTCACCATGTGCCAACGGGCCCCTCTGTG...ACGGAAAGCGTTCTTTCCTAAACTATTCACCAAGAGTCGATATACAGGCATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp ATGTACTCCTTCCATCTGCCACTTAATGTATCTGAAAGTGACTATGGAAATCTGCAAAGGTCCCAGTCTTaGACGTTTGCTTTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: MYSFHLPLNVSESDYGNLQRSQS*TFALAG
Trigger: GCCTGCTAAAGCAAACGTCCAAGACTGGGACCTTTG...CAGATTTCCATAGTCACTTTCAGATACATTAAGTGGCAGATGGAAGGAGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp AAAATGCCTGTATATCGACTCTTGGTGAATAGTTTAGGAAAGAACGCTTTCCGTGATGTACCCTGGGTATaGGTCCTCTGTGATCACTTT +
Preference number: 4 (lower is better)
Translates to: KMPVYRLLVNSLGKNAFRDVPWV*VLCDHF
Trigger: AAAGTGATCACAGAGGACTCATACCCAGGGTACATC...ACGGAAAGCGTTCTTTCCTAAACTATTCACCAAGAGTCGATATACAGGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR GCA 90 bp GTGAATAGTTTAGGAAAGAACGCTTTCCGTACAGAACCTGTACTGTTCAACATAGCCTTCATCATTCACTaGGACAGAAAGAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: VNSLGKNAFRTEPVLFNIAFIIH*DRKNPA
Trigger: GGCAGGATTCTTTCTGTCGCAGTGAATGATGAAGGC...TATGTTGAACAGTACAGGTTCTGTACGGAAAGCGTTCTTTCCTAAACTATTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR TCA 90 bp GTGAATAGTTTAGGAAAGAACGCTTTCCGTACAGAACCTGTACTGTTCAACATATGCATGCCACCAGGATaGAGGGTCTTGTTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: VNSLGKNAFRTEPVLFNICMPPG*RVLFRK
Trigger: TTTTCTAAACAAGACCCTTCATCCTGGTGGCATGCA...TATGTTGAACAGTACAGGTTCTGTACGGAAAGCGTTCTTTCCTAAACTATTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp GTGAATAGTTTAGGAAAGAACGCTTTCCGTACAGAACCTGTACTGTTCAACATATCAAACCGGTCAGAATaGACAACTGTGCCCAATTTG +
Preference number: 4 (lower is better)
Translates to: VNSLGKNAFRTEPVLFNISNRSE*TTVPNL
Trigger: CAAATTGGGCACAGTTGTCCATTCTGACCGGTTTGA...TATGTTGAACAGTACAGGTTCTGTACGGAAAGCGTTCTTTCCTAAACTATTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp ATGTACTCCTTCCATCTGCCACTTAATGTATCTGAAAGTGACTATGGAAATCTGAGTCACAGATGTGATTaGTGTAGGGGTAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: MYSFHLPLNVSESDYGNLSHRCD*CRGSIC
Trigger: ACAGATGCTACCCCTACACCAATCACATCTGTGACT...CAGATTTCCATAGTCACTTTCAGATACATTAAGTGGCAGATGGAAGGAGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp ATGTACTCCTTCCATCTGCCACTTAATGTATCTGAAAGTGACTATGGAAATCTGAAGATTTTGGCTTTGTaGTCCTCAGTCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: MYSFHLPLNVSESDYGNLKILAL*SSVSRV
Trigger: GACTCTGGAGACTGAGGACCACAAAGCCAAAATCTT...CAGATTTCCATAGTCACTTTCAGATACATTAAGTGGCAGATGGAAGGAGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CCA 90 bp ATGTACTCCTTCCATCTGCCACTTAATGTATCTGAAAGTGACTATGGAAATCTGACTGCATTCAAATACTaGACCAGACGTTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: MYSFHLPLNVSESDYGNLTAFKY*TRRSLS
Trigger: AGAGAGTGAACGTCTGGTCCAGTATTTGAATGCAGT...CAGATTTCCATAGTCACTTTCAGATACATTAAGTGGCAGATGGAAGGAGTACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp GAGGGCAGCTTTGCCAGGCATTGTTTAGGCGGAAGGCCAAGGCACTaGTGTGCCTGCCCTCGAGGGCCGCGAACTTGCGGAAGGTGCAGT +
Preference number: 5 (lower is better)
Translates to: EGSFARHCLGGRPRH*CACPRGPRTCGRCS
Trigger: ACTGCACCTTCCGCAAGTTCGCGGCCCTCGAGGGCAGGCACACCAGTGCCTTGGCCTTCCGCCTAAACAATGCCTGGCAAAGCTGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp CAGCTTTGCCAGGCATTGTTTAGGCGGAAGGCCAAGGCACTGGTGTaGCTGCCCTCGAGGGCCGCGAACTTGCGGAAGGTGCAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: QLCQALFRRKAKALV*LPSRAANLRKVQFW
Trigger: CCAGAACTGCACCTTCCGCAAGTTCGCGGCCCTCGAGGGCAGGCACACCAGTGCCTTGGCCTTCCGCCTAAACAATGCCTGGCAAAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp TTTGCCAGGCATTGTTTAGGCGGAAGGCCAAGGCACTGGTGTGCCTaGCCTCGAGGGCCGCGAACTTGCGGAAGGTGCAGTTCTGGATGT +
Preference number: 5 (lower is better)
Translates to: FARHCLGGRPRHWCA*PRGPRTCGRCSSGC
Trigger: ACATCCAGAACTGCACCTTCCGCAAGTTCGCGGCCCTCGAGGGCAGGCACACCAGTGCCTTGGCCTTCCGCCTAAACAATGCCTGGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp TGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGGACCCCAGATCCTGTaGTCCATCATTTCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: WQGCCLEESGQCVLRGKRGPQIL*SIISVP
Trigger: GGGCACAGAAATGATGGACAACAGGATCTGGGGTCC...CCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp TGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGCAGCTTTGCCAGGCATaGTTTAGGCGGAAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: WQGCCLEESGQCVLRGKRQLCQA*FRRKAK
Trigger: CTTGGCCTTCCGCCTAAACAATGCCTGGCAAAGCTG...CCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp CCCACTGCAGATGGCCCCTCTCCAGTCTGGGACATTGATGCAGTCTaGGTGTCGGACCAGCCAGTTGTCGTCCTTAGTGAGATAGGAGCC +
Preference number: 5 (lower is better)
Translates to: PTADGPSPVWDIDAV*VSDQPVVVLSEIGA
Trigger: GGCTCCTATCTCACTAAGGACGACAACTGGCTGGTCCGACACCCAGACTGCATCAATGTCCCAGACTGGAGAGGGGCCATCTGCAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCACTCCATGACCGCACATaGTCCACCAGACTCAGGATG +
Preference number: 5 (lower is better)
Translates to: VAGSVKTVAGLLPRGEWALHDRT*STRLRM
Trigger: CATCCTGAGTCTGGTGGACAATGTGCGGTCATGGAG...TGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAGGTTTCCCTGCCACCTaGACCTGTGTAGAGGTGCAA +
Preference number: 5 (lower is better)
Translates to: VAGSVKTVAGLLPRGEWAGFPAT*TCVEVQ
Trigger: TTGCACCTCTACACAGGTCAAGGTGGCAGGGAAACC...TGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAACCAGGTGGAAGTGAATaGGGTACTGGCCCACCAGCT +
Preference number: 5 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKPGGSE*GTGPPA
Trigger: AGCTGGTGGGCCAGTACCCAATTCACTTCCACCTGG...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp TTCACTTCACCCTCTCGCAGAGTCAGAGGGGGCTGGCTGGACACCAATCTGAACCAGTCCTGCCTGGGCTaGGGGATGTACCCTGGGTAT +
Preference number: 5 (lower is better)
Translates to: FTSPSRRVRGGWLDTNLNQSCLG*GMYPGY
Trigger: ATACCCAGGGTACATCCCCAAGCCCAGGCAGGACTG...GTTCAGATTGGTGTCCAGCCAGCCCCCTCTGACTCTGCGAGAGGGTGAAGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACCTGGCTGTTGGAACACAGATGTCTaGTCCCCGTCCATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GNVVWQWVAELGAHRPGCWNTDV*SPSMSS
Trigger: GCTGGACATGGACGGGGACAAGACATCTGTGTTCCA...ACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 90 bp CGGATAATGGCTGGTTCCCGAGGTTTCAGTGGGTCTGCGTCCTGGTaGGGGCTGTACCTGGCAGAGATGATGGAGAGGAAGGGCCGTTTA +
Preference number: 5 (lower is better)
Translates to: RIMAGSRGFSGSASW*GLYLAEMMERKGRL
Trigger: TAAACGGCCCTTCCTCTCCATCATCTCTGCCAGGTACAGCCCTCACCAGGACGCAGACCCACTGAAACCTCGGGAACCAGCCATTATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp AGGGGAGCACCCGGAACTCTTCTGCCTGGTACATCGAATAGTCAGTaGTGGCAACAACCAGGGTGTCTCCAGGCCTCCATGACCGCACAT +
Preference number: 5 (lower is better)
Translates to: RGAPGTLLPGTSNSQ*WQQPGCLQASMTAH
Trigger: ATGTGCGGTCATGGAGGCCTGGAGACACCCTGGTTGTTGCCAGCACTGACTATTCGATGTACCAGGCAGAAGAGTTCCGGGTGCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAATGCCCAGTTTGGTCATaGCCTTCCGGGCTGTGTCAT +
Preference number: 5 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKCPVWS*PSGLCH
Trigger: ATGACACAGCCCGGAAGGCAATGACCAAACTGGGCA...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAAGGTGGAGGAAGTGCTaGCTGCCCAGTTTGGTCATT +
Preference number: 5 (lower is better)
Translates to: VAGSVKTVAGLLPRGEWARWRKC*LPSLVI
Trigger: AATGACCAAACTGGGCAGCAAGCACTTCCTCCACCT...TGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp CCACATGTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTCTGTCTGGAACAGTTaGAAAACCCGGGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: PHVAGSVKTVAGLLPRGESVWNS*KTRAAA
Trigger: GGCTGCTGCCCGGGTTTTCAAACTGTTCCAGACAGA...CTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCACATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCACAGTGGTCAAAAGTGTaGCGTTCCTCTGGCCCATCT +
Preference number: 5 (lower is better)
Translates to: VAGSVKTVAGLLPRGEWAQWSKV*RSSGPS
Trigger: AGATGGGCCAGAGGAACGCAACACTTTTGACCACTG...TGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 90 bp AGTCCTGCCTGGGCTTGGGGATGTACCCTGGGTATGAGTCCTCTGTaGTCACTTTGCACATCCTGCTATCCCGATCGGATGGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: SPAWAWGCTLGMSPL*SLCTSCYPDRMGEG
Trigger: CCCTTCTCCCATCCGATCGGGATAGCAGGATGTGCAAAGTGATCACAGAGGACTCATACCCAGGGTACATCCCCAAGCCCAGGCAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp GGAGCACCCGGAACTCTTCTGCCTGGTACATCGAATAGTCAGTGCTaGCAACAACCAGGGTGTCTCCAGGCCTCCATGACCGCACATTGT +
Preference number: 5 (lower is better)
Translates to: GAPGTLLPGTSNSQC*QQPGCLQASMTAHC
Trigger: ACAATGTGCGGTCATGGAGGCCTGGAGACACCCTGGTTGTTGCCAGCACTGACTATTCGATGTACCAGGCAGAAGAGTTCCGGGTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp TGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGCGACTCCATCCATTGTaGTGGCCTGTATATCAATGG +
Preference number: 5 (lower is better)
Translates to: WQGCCLEESGQCVLRGKRRLHPL*WPVYQW
Trigger: CCATTGATATACAGGCCACAACAATGGATGGAGTCG...CCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCATCCTCTGTGATCACTTaGCACATCCTGCTATCCCGA +
Preference number: 5 (lower is better)
Translates to: VAGSVKTVAGLLPRGEWASSVIT*HILLSR
Trigger: TCGGGATAGCAGGATGTGCAAAGTGATCACAGAGGA...TGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACCTGGCTGTGCGCAGTTGATGAGATaGTTGTTGGGATTCGCCATC +
Preference number: 5 (lower is better)
Translates to: GNVVWQWVAELGAHRPGCAQLMR*LLGFAI
Trigger: GATGGCGAATCCCAACAACAATCTCATCAACTGCGC...ACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAACCTGCAGCTGCGCAGTaGATGAGATTGTTGTTGGGA +
Preference number: 5 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKPAAAQ*MRLLLG
Trigger: TCCCAACAACAATCTCATCAACTGCGCAGCTGCAGG...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp CTGTGTAGAGGTGCAAGCTTTGCAGGGGAGCACCCGGAACTCTTCTaGCTGGTACATCGAATAGTCAGTGCTGGCAACAACCAGGGTGTC +
Preference number: 5 (lower is better)
Translates to: LCRGASFAGEHPELF*LVHRIVSAGNNQGV
Trigger: GACACCCTGGTTGTTGCCAGCACTGACTATTCGATGTACCAGGCAGAAGAGTTCCGGGTGCTCCCCTGCAAAGCTTGCACCTCTACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp CTTCATGCGCAGATTGCTGCTCTTGTAGGCCTGGATGTACATCTGTaGATAGCGCCCACTGCAGATGGCCCCTCTCCAGTCTGGGACATT +
Preference number: 5 (lower is better)
Translates to: LHAQIAALVGLDVHL*IAPTADGPSPVWDI
Trigger: AATGTCCCAGACTGGAGAGGGGCCATCTGCAGTGGGCGCTATGCACAGATGTACATCCAGGCCTACAAGAGCAGCAATCTGCGCATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp ATAGCCTCCCTGTTCATCCAAATCTCCAGCCAGGTGGAAGTGAATTaGGTACTGGCCCACCAGCTGCTGCCCCATGTACTTCAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: IASLFIQISSQVEVN*VLAHQLLPHVLQLH
Trigger: GTGGAGCTGAAGTACATGGGGCAGCAGCTGGTGGGCCAGTACCCAATTCACTTCCACCTGGCTGGAGATTTGGATGAACAGGGAGGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp GTAGGCAGTAAAGTGTCGGATAATGGCTGGTTCCCGAGGTTTCAGTaGGTCTGCGTCCTGGTGAGGGCTGTACCTGGCAGAGATGATGGA +
Preference number: 5 (lower is better)
Translates to: VGSKVSDNGWFPRFQ*VCVLVRAVPGRDDG
Trigger: TCCATCATCTCTGCCAGGTACAGCCCTCACCAGGACGCAGACCCACTGAAACCTCGGGAACCAGCCATTATCCGACACTTTACTGCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp ATTCTGGCCAATAGGGAGGGTCCTTCCACTGTGGTCCAAGCCACCTaGACCCCAGATCCTGTTGTCCATCATTTCTGTGCCCACATTGCC +
Preference number: 5 (lower is better)
Translates to: ILANREGPSTVVQAT*TPDPVVHHFCAHIA
Trigger: GGCAATGTGGGCACAGAAATGATGGACAACAGGATCTGGGGTCCAGGTGGCTTGGACCACAGTGGAAGGACCCTCCCTATTGGCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp CACCACTGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATCCATGTCCAGCTGGTaGAACCAGGGCCCGGGCTCT +
Preference number: 5 (lower is better)
Translates to: HHCGIRWHQKNSTVMSSPSMSSW*NQGPGS
Trigger: AGAGCCCGGGCCCTGGTTCAACCAGCTGGACATGGA...TGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp CCACATGTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTCACCCTTGTTGAAGTaGATGAGCCAGATGGCAAGC +
Preference number: 5 (lower is better)
Translates to: PHVAGSVKTVAGLLPRGESPLLK*MSQMAS
Trigger: GCTTGCCATCTGGCTCATCAACTTCAACAAGGGTGA...CTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCACATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAATCCAGTCACCCTTGTaGAAGTTGATGAGCCAGATG +
Preference number: 5 (lower is better)
Translates to: VAGSVKTVAGLLPRGEWAIQSPL*KLMSQM
Trigger: CATCTGGCTCATCAACTTCAACAAGGGTGACTGGAT...TGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp CTCAGTGAACCTGGGGTAAGCCGTGGCTGTGCAGTCGCTGATGCCTaGATTCCTTGGGAGCAGAGCTTTAATCTTGATTCTCTCACAGCC +
Preference number: 5 (lower is better)
Translates to: LSEPGVSRGCAVADA*IPWEQSFNLDSLTA
Trigger: GGCTGTGAGAGAATCAAGATTAAAGCTCTGCTCCCAAGGAATGCAGGCATCAGCGACTGCACAGCCACGGCTTACCCCAGGTTCACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp CCTGGGGTAAGCCGTGGCTGTGCAGTCGCTGATGCCTGCATTCCTTaGGAGCAGAGCTTTAATCTTGATTCTCTCACAGCCCTTCATGGA +
Preference number: 5 (lower is better)
Translates to: PGVSRGCAVADACIP*EQSFNLDSLTALHG
Trigger: TCCATGAAGGGCTGTGAGAGAATCAAGATTAAAGCTCTGCTCCCAAGGAATGCAGGCATCAGCGACTGCACAGCCACGGCTTACCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAATGGCCAATGTGTACTaGATAGTCTCTGTTATGGCC +
Preference number: 5 (lower is better)
Translates to: VAGSVKTVAGLLPRGEWAMANVY*IVSVMA
Trigger: GGCCATAACAGAGACTATCAAGTACACATTGGCCAT...TGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCAAGCACAATACTGAAATaGCCCTCAAAAGGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: VAGSVKTVAGLLPRGEWASTILK*PSKGQR
Trigger: CCTTTGCCCTTTTGAGGGCAATTTCAGTATTGTGCT...TGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp TTCACTTCACCCTCTCGCAGAGTCAGAGGGGGCTGGCTGGACACCAATCTGAACGTTGTCTTGACTCCGTaGTCTATGATCATGCCAGCC +
Preference number: 5 (lower is better)
Translates to: FTSPSRRVRGGWLDTNLNVVLTP*SMIMPA
Trigger: GGCTGGCATGATCATAGACAACGGAGTCAAGACAAC...GTTCAGATTGGTGTCCAGCCAGCCCCCTCTGACTCTGCGAGAGGGTGAAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GTGGCTGGCAGTGTAAAGACAGTGGCAGGGCTGCTGCCTAGAGGAGAGTGGGCATTCTTTATCTCCTGCTaGGAGCCATCATCATATGGG +
Preference number: 5 (lower is better)
Translates to: VAGSVKTVAGLLPRGEWAFFISC*EPSSYG
Trigger: CCCATATGATGATGGCTCCAAGCAGGAGATAAAGAA...TGCCCACTCTCCTCTAGGCAGCAGCCCTGCCACTGTCTTTACACTGCCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACCTGGCTGTAGCAGAGCTTTAATCTaGATTCTCTCACAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GNVVWQWVAELGAHRPGCSRALI*ILSQPF
Trigger: GAAGGGCTGTGAGAGAATCAAGATTAAAGCTCTGCT...ACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GGGCTGCTGCCTAGAGGAGAGTGGGCAGTGTGTACTGAGGGGCAAGAGGGAAAATGGAAGATTTTGGCTTaGTGGTCCTCAGTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GLLPRGEWAVCTEGQEGKWKILA*WSSVSR
Trigger: TCTGGAGACTGAGGACCACAAAGCCAAAATCTTCCA...TTTTCCCTCTTGCCCCTCAGTACACACTGCCCACTCTCCTCTAGGCAGCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 90 bp GTACCTGGCAGAGATGATGGAGAGGAAGGGCCGTTTATCCTTGGCTaGGGCCTCAGTTGTCTTGACTCCGTTGTCTATGATCATGCCAGC +
Preference number: 5 (lower is better)
Translates to: VPGRDDGEEGPFILG*GLSCLDSVVYDHAS
Trigger: GCTGGCATGATCATAGACAACGGAGTCAAGACAACTGAGGCCTCAGCCAAGGATAAACGGCCCTTCCTCTCCATCATCTCTGCCAGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 90 bp ATGCCCTGCAGAATGGCATTTCTGAAGCTGCCGTGGCTCACCACGTaGCCTCGACTCCCATCAATCACCACTATCTGGATGCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: MPCRMAFLKLPWLTT*PRLPSITTIWMPSS
Trigger: AGAAGATGGCATCCAGATAGTGGTGATTGATGGGAGTCGAGGTCACGTGGTGAGCCACGGCAGCTTCAGAAATGCCATTCTGCAGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp ACAATACTGAAATTGCCCTCAAAAGGGCAAAGGGCACTCCCAGCATaGAGCTCTCCACCGTCATCAATCAGGATGTACCGGGTACGCAGC +
Preference number: 5 (lower is better)
Translates to: TILKLPSKGQRALPA*SSPPSSIRMYRVRS
Trigger: GCTGCGTACCCGGTACATCCTGATTGATGACGGTGGAGAGCTGCATGCTGGGAGTGCCCTTTGCCCTTTTGAGGGCAATTTCAGTATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp ACAGTGATGAAGCTCCAAGGGTGTCTAAATCCAAGGTGGAGGAAGTaGTTGCTGCCCAGTTTGGTCATTGCCTTCCGGGCTGTGTCATCC +
Preference number: 5 (lower is better)
Translates to: TVMKLQGCLNPRWRK*LLPSLVIAFRAVSS
Trigger: GGATGACACAGCCCGGAAGGCAATGACCAAACTGGGCAGCAAGCACTTCCTCCACCTTGGATTTAGACACCCTTGGAGCTTCATCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp TCCATGATCCTGGTTCTTGTAGGCAGTAAAGTGTCGGATAATGGCTaGTTCCCGAGGTTTCAGTGGGTCTGCGTCCTGGTGAGGGCTGTA +
Preference number: 5 (lower is better)
Translates to: SMILVLVGSKVSDNG*FPRFQWVCVLVRAV
Trigger: TACAGCCCTCACCAGGACGCAGACCCACTGAAACCTCGGGAACCAGCCATTATCCGACACTTTACTGCCTACAAGAACCAGGATCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCAAACCCCAGTGCAAACTaGATGTGGCCCCCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPNPSAN*MWPPKV
Trigger: TACCTTTGGGGGCCACATCAAGTTTGCACTGGGGTT...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp CCCACATTGCCACTCTCGCCAACAAACAAGCTGTTCTTTATCTCCTaGTTGGAGCCATCATCATATGGGAAGGTTCCACCACTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PTLPLSPTNKLFFIS*LEPSSYGKVPPLAR
Trigger: CCTGGCCAGTGGTGGAACCTTCCCATATGATGATGGCTCCAAGCAGGAGATAAAGAACAGCTTGTTTGTTGGCGAGAGTGGCAATGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp GGCTCACCACGTGACCTCGACTCCCATCAATCACCACTATCTGGATaGCATCTTCTGAGCAAGGGTACCTCCTCCCATCCACTTCAATAT +
Preference number: 5 (lower is better)
Translates to: GSPRDLDSHQSPLSG*HLLSKGTSSHPLQY
Trigger: ATATTGAAGTGGATGGGAGGAGGTACCCTTGCTCAGAAGATGGCATCCAGATAGTGGTGATTGATGGGAGTCGAGGTCACGTGGTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp CCTCTAATGGGAAAATTCTGGCCAATAGGGAGGGTCCTTCCACTGTaGTCCAAGCCACCTGGACCCCAGATCCTGTTGTCCATCATTTCT +
Preference number: 5 (lower is better)
Translates to: PLMGKFWPIGRVLPL*SKPPGPQILLSIIS
Trigger: AGAAATGATGGACAACAGGATCTGGGGTCCAGGTGGCTTGGACCACAGTGGAAGGACCCTCCCTATTGGCCAGAATTTTCCCATTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp TTTGCTTTAGCAGGCGATTGTGAACATCTGAAAGGATGGAAAAGGTaGTGCCTCTTGGGTAGCAGAGCCCCACTCGGATCCAGTCACCCT +
Preference number: 5 (lower is better)
Translates to: FALAGDCEHLKGWKR*CLLGSRAPLGSSHP
Trigger: AGGGTGACTGGATCCGAGTGGGGCTCTGCTACCCAAGAGGCACCACCTTTTCCATCCTTTCAGATGTTCACAATCGCCTGCTAAAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp TCTTGGACGTTTGCTTTAGCAGGCGATTGTGAACATCTGAAAGGATaGAAAAGGTGGTGCCTCTTGGGTAGCAGAGCCCCACTCGGATCC +
Preference number: 5 (lower is better)
Translates to: SWTFALAGDCEHLKG*KRWCLLGSRAPLGS
Trigger: GGATCCGAGTGGGGCTCTGCTACCCAAGAGGCACCACCTTTTCCATCCTTTCAGATGTTCACAATCGCCTGCTAAAGCAAACGTCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GGCAATGTGGTGTGGCAGTGGGTTGCTGAGCTTGGGGCTCACAGACCTGGCTGTCTGGATGAAGAAACATaGAAATGTTCACCATGCTCT +
Preference number: 5 (lower is better)
Translates to: GNVVWQWVAELGAHRPGCLDEET*KCSPCS
Trigger: AGAGCATGGTGAACATTTCAATGTTTCTTCATCCAG...ACAGCCAGGTCTGTGAGCCCCAAGCTCAGCAACCCACTGCCACACCACATTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCATTGATCAACAGACCGTaGGAGCCATGGACAGTGATG +
Preference number: 5 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPLINRP*EPWTVM
Trigger: CATCACTGTCCATGGCTCCAACGGTCTGTTGATCAA...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 90 bp GGTCTGGCAGGATGTTTTCATCAGCCCTTCCATACAGCACAATACTaGAATTGCCCTCAAAAGGGCAAAGGGCACTCCCAGCATGCAGCT +
Preference number: 5 (lower is better)
Translates to: GLAGCFHQPFHTAQY*NCPQKGKGHSQHAA
Trigger: AGCTGCATGCTGGGAGTGCCCTTTGCCCTTTTGAGGGCAATTTCAGTATTGTGCTGTATGGAAGGGCTGATGAAAACATCCTGCCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 90 bp GAAGTAATCGGGACATCCTCAAAGGCTATGTTGGTCACATTGTTGTaGGGGCAGCTTTGCCAGGCATTGTTTAGGCGGAAGGCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: EVIGTSSKAMLVTLL*GQLCQALFRRKAKA
Trigger: TGCCTTGGCCTTCCGCCTAAACAATGCCTGGCAAAGCTGCCCTCACAACAATGTGACCAACATAGCCTTTGAGGATGTCCCGATTACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp CGGGTTTTCCACATAAGAATCGCACTCGATAGCTTCGGCAGGCTCTaGCCCGGGTGTAGCAAGCAAACCTGTAATCTTGGCCATTTTTGT +
Preference number: 5 (lower is better)
Translates to: RVFHIRIALDSFGRL*PGCSKQTCNLGHFC
Trigger: ACAAAAATGGCCAAGATTACAGGTTTGCTTGCTACACCCGGGGCAGAGCCTGCCGAAGCTATCGAGTGCGATTCTTATGTGGAAAACCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp CACCTGGACCCCAGATCCTGTTGTCCATCATTTCTGTGCCCACATTaGCACTCTCGCCAACAAACAAGCTGTTCTTTATCTCCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: HLDPRSCCPSFLCPH*HSRQQTSCSLSPAW
Trigger: CCAAGCAGGAGATAAAGAACAGCTTGTTTGTTGGCGAGAGTGGCAATGTGGGCACAGAAATGATGGACAACAGGATCTGGGGTCCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp GGTCCAAGCCACCTGGACCCCAGATCCTGTTGTCCATCATTTCTGTaGCCACATTGCCACTCTCGCCAACAAACAAGCTGTTCTTTATCT +
Preference number: 5 (lower is better)
Translates to: GPSHLDPRSCCPSFL*PHCHSRQQTSCSLS
Trigger: AGATAAAGAACAGCTTGTTTGTTGGCGAGAGTGGCAATGTGGGCACAGAAATGATGGACAACAGGATCTGGGGTCCAGGTGGCTTGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp TCAAGAAGAGCAACCCAGAATCCTCATCCCAGTAGTAGTGGCTCCTaGCAGGATAGCTCTGCTCAACTTTGTCCATCTGCAGAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: SRRATQNPHPSSSGS*QDSSAQLCPSAESS
Trigger: TGAGGACTCTGCAGATGGACAAAGTTGAGCAGAGCTATCCTGGCAGGAGCCACTACTACTGGGATGAGGATTCTGGGTTGCTCTTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp CATTGCCACTCTCGCCAACAAACAAGCTGTTCTTTATCTCCTGCTTaGAGCCATCATCATATGGGAAGGTTCCACCACTGGCCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: HCHSRQQTSCSLSPA*SHHHMGRFHHWPGS
Trigger: TGACCCTGGCCAGTGGTGGAACCTTCCCATATGATGATGGCTCCAAGCAGGAGATAAAGAACAGCTTGTTTGTTGGCGAGAGTGGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp TCTGCTCTCTCAACCTGGTATCAAAGTGTGCTGAGACCTGGCTGCCTGTCACCACAGTTGATGAGATTGTaGTTGGGATTCGCCATCCAG +
Preference number: 5 (lower is better)
Translates to: SALSTWYQSVLRPGCLSPQLMRL*LGFAIQ
Trigger: CTGGATGGCGAATCCCAACAACAATCTCATCAACTG...TGGTGACAGGCAGCCAGGTCTCAGCACACTTTGATACCAGGTTGAGAGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 90 bp GTGACCTCGACTCCCATCAATCACCACTATCTGGATGCCATCTTCTaGGCAAGGGTACCTCCTCCCATCCACTTCAATATAAGCGAAGTC +
Preference number: 5 (lower is better)
Translates to: VTSTPINHHYLDAIF*ARVPPPIHFNISEV
Trigger: GACTTCGCTTATATTGAAGTGGATGGGAGGAGGTACCCTTGCTCAGAAGATGGCATCCAGATAGTGGTGATTGATGGGAGTCGAGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp TCTCCACCGTCATCAATCAGGATGTACCGGGTACGCAGCACAATGTaGTCATGGTGGTCTTTAATGACAAGCTTTCCTCCCCCTGAGATA +
Preference number: 5 (lower is better)
Translates to: SPPSSIRMYRVRSTM*SWWSLMTSFPPPEI
Trigger: TATCTCAGGGGGAGGAAAGCTTGTCATTAAAGACCACCATGAGCACATTGTGCTGCGTACCCGGTACATCCTGATTGATGACGGTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp CTTCCGGGCTGTGTCATCCAGGTTTCTAGAGCCTTCATCATTCACTaGGACAGAAAGAATCCTGCCATCGGGCACTGCATTCAAATACTG +
Preference number: 5 (lower is better)
Translates to: LPGCVIQVSRAFIIH*DRKNPAIGHCIQIL
Trigger: CAGTATTTGAATGCAGTGCCCGATGGCAGGATTCTTTCTGTCGCAGTGAATGATGAAGGCTCTAGAAACCTGGATGACACAGCCCGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp TCTAAATCCAAGGTGGAGGAAGTGCTTGCTGCCCAGTTTGGTCATTaGCTTCCGGGCTGTGTCATCCAGGTTTCTAGAGCCTTCATCATT +
Preference number: 5 (lower is better)
Translates to: SKSKVEEVLAAQFGH*LPGCVIQVSRAFII
Trigger: AATGATGAAGGCTCTAGAAACCTGGATGACACAGCCCGGAAGGCAATGACCAAACTGGGCAGCAAGCACTTCCTCCACCTTGGATTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp CCGTCATCAATCAGGATGTACCGGGTACGCAGCACAATGTGCTCATaGTGGTCTTTAATGACAAGCTTTCCTCCCCCTGAGATAGTGATG +
Preference number: 5 (lower is better)
Translates to: PSSIRMYRVRSTMCS*WSLMTSFPPPEIVM
Trigger: CATCACTATCTCAGGGGGAGGAAAGCTTGTCATTAAAGACCACCATGAGCACATTGTGCTGCGTACCCGGTACATCCTGATTGATGACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp CTTAACAAGGAGGCCAAGGCAGTGGTCAAAAGTGTTGCGTTCCTCTaGCCCATCTTCAGTGAAGAAGCAGTGGCCCAAAGAATTATAGCC +
Preference number: 5 (lower is better)
Translates to: LNKEAKAVVKSVAFL*PIFSEEAVAQRIIA
Trigger: GGCTATAATTCTTTGGGCCACTGCTTCTTCACTGAAGATGGGCCAGAGGAACGCAACACTTTTGACCACTGCCTTGGCCTCCTTGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp CACCACTGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCAGGGCGACTCCATCCATaGTTGTGGCCTGTATATCAA +
Preference number: 5 (lower is better)
Translates to: HHCGIRWHQKNSTVMSSPGRLHP*LWPVYQ
Trigger: TTGATATACAGGCCACAACAATGGATGGAGTCGCCC...TGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp CACCACTGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCAACAAAGGTCCCAGTCTaGGACGTTTGCTTTAGCAGG +
Preference number: 5 (lower is better)
Translates to: HHCGIRWHQKNSTVMSSPTKVPV*DVCFSR
Trigger: CCTGCTAAAGCAAACGTCCAAGACTGGGACCTTTGT...TGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 90 bp AGCAGCCGAGCCTTTGTGACCATGGTATTCAATGTGGTCTTCAACTaGAGAGGAGGGATTTCCTTTCACAGTGATGAAGCTCCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: SSRAFVTMVFNVVFN*RGGISFHSDEAPRV
Trigger: CACCCTTGGAGCTTCATCACTGTGAAAGGAAATCCCTCCTCTTCAGTTGAAGACCACATTGAATACCATGGTCACAAAGGCTCGGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 90 bp TCTGTCTGGAACAGTTTGAAAACCCGGGCAGCAGCCGAGCCTTTGTaGCCATGGTATTCAATGTGGTCTTCAACTGAAGAGGAGGGATTT +
Preference number: 5 (lower is better)
Translates to: SVWNSLKTRAAAEPL*PWYSMWSSTEEEGF
Trigger: AAATCCCTCCTCTTCAGTTGAAGACCACATTGAATACCATGGTCACAAAGGCTCGGCTGCTGCCCGGGTTTTCAAACTGTTCCAGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp TTCCTGGGTAAGCTGCTCGCAGATCTGAAATTTTCTCCCCACCTTTaGTCTGAGGCACCTTATCATGGTCAAACCACTCTGTCCATTCCA +
Preference number: 5 (lower is better)
Translates to: FLGKLLADLKFSPHL*SEAPYHGQTTLSIP
Trigger: TGGAATGGACAGAGTGGTTTGACCATGATAAGGTGCCTCAGAGCAAAGGTGGGGAGAAAATTTCAGATCTGCGAGCAGCTTACCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp GCTCAACTTTGTCCATCTGCAGAGTCCTCACAAAGGTCCCAGTCTTaGACGTTTGCTTTAGCAGGCGATTGTGAACATCTGAAAGGATGG +
Preference number: 5 (lower is better)
Translates to: AQLCPSAESSQRSQS*TFALAGDCEHLKGW
Trigger: CCATCCTTTCAGATGTTCACAATCGCCTGCTAAAGCAAACGTCCAAGACTGGGACCTTTGTGAGGACTCTGCAGATGGACAAAGTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp TGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATGCCCATCAAGAGTGCCTCCTTaGTCTACTCCGATGTACTTC +
Preference number: 5 (lower is better)
Translates to: CGIRWHQKNSTVMSSPCPSRVPP*STPMYF
Trigger: GAAGTACATCGGAGTAGACAAAGGAGGCACTCTTGA...TGGGCATGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GTGAATAGTTTAGGAAAGAACGCTTTCCGTACAGAACCTGTACTGTTCAACATATCGAGGGCCGCGAACTaGCGGAAGGTGCAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: VNSLGKNAFRTEPVLFNISRAAN*RKVQFW
Trigger: CCAGAACTGCACCTTCCGCAAGTTCGCGGCCCTCGA...TATGTTGAACAGTACAGGTTCTGTACGGAAAGCGTTCTTTCCTAAACTATTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp TGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCATGCCCATTCAACTTGAGACCTTaGTCTGCCCCAAGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: CGIRWHQKNSTVMSSPCPFNLRP*SAPSFS
Trigger: GGAAAAGCTTGGGGCAGACAAAGGTCTCAAGTTGAA...TGGGCATGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp GCCTCCTTTGTCTACTCCGATGTACTTCAGGCCATAGTAAGGGTCTaGCAGGATGTTTTCATCAGCCCTTCCATACAGCACAATACTGAA +
Preference number: 5 (lower is better)
Translates to: ASFVYSDVLQAIVRV*QDVFISPSIQHNTE
Trigger: TTCAGTATTGTGCTGTATGGAAGGGCTGATGAAAACATCCTGCCAGACCCTTACTATGGCCTGAAGTACATCGGAGTAGACAAAGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp TCGATTGTTGTAGAATTTACCCAGTGGAATGTGCTCAGAATAACCTaGAGAGTACATTCCCACAGAGGGGCCCGTTGGCACATGGTGAAA +
Preference number: 5 (lower is better)
Translates to: SIVVEFTQWNVLRIT*RVHSHRGARWHMVK
Trigger: TTTCACCATGTGCCAACGGGCCCCTCTGTGGGAATGTACTCTCCAGGTTATTCTGAGCACATTCCACTGGGTAAATTCTACAACAATCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp ATGTACTCCTTCCATCTGCCACTTAATGTATCTGAAAGTGACTATGGAAATCTGGGTCGGAAGCTGCCTTaGAAGCCGACGAACGCCATC +
Preference number: 5 (lower is better)
Translates to: MYSFHLPLNVSESDYGNLGRKLP*KPTNAI
Trigger: GATGGCGTTCGTCGGCTTCAAAGGCAGCTTCCGACC...CAGATTTCCATAGTCACTTTCAGATACATTAAGTGGCAGATGGAAGGAGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 90 bp GGGCGACTCCATCCATTGTTGTGGCCTGTATATCAATGGGTCGATTaGAGATTTTTCCTGGGTAAGCTGCTCGCAGATCTGAAATTTTCT +
Preference number: 5 (lower is better)
Translates to: GRLHPLLWPVYQWVD*RFFLGKLLADLKFS
Trigger: AGAAAATTTCAGATCTGCGAGCAGCTTACCCAGGAAAAATCTGCAATCGACCCATTGATATACAGGCCACAACAATGGATGGAGTCGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 90 bp AGCCCGGTAGTTAGAATGTGCTCGATTGTTGTAGAATTTACCCAGTaGAATGTGCTCAGAATAACCTGGAGAGTACATTCCCACAGAGGG +
Preference number: 5 (lower is better)
Translates to: SPVVRMCSIVVEFTQ*NVLRITWRVHSHRG
Trigger: CCCTCTGTGGGAATGTACTCTCCAGGTTATTCTGAGCACATTCCACTGGGTAAATTCTACAACAATCGAGCACATTCTAACTACCGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp ATGTACTCCTTCCATCTGCCACTTAATGTATCTGAAAGTGACTATGGAAATCTGGATCAGGACACTCAGTaGCCACTGCAGATGAGGCCC +
Preference number: 5 (lower is better)
Translates to: MYSFHLPLNVSESDYGNLDQDTQ*PLQMRP
Trigger: GGGCCTCATCTGCAGTGGCAACTGAGTGTCCTGATC...CAGATTTCCATAGTCACTTTCAGATACATTAAGTGGCAGATGGAAGGAGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp ATGTACTCCTTCCATCTGCCACTTAATGTATCTGAAAGTGACTATGGAAATCTGAAAAGGTGGTGCCTCTaGGGTAGCAGAGCCCCACTC +
Preference number: 5 (lower is better)
Translates to: MYSFHLPLNVSESDYGNLKRWCL*GSRAPL
Trigger: GAGTGGGGCTCTGCTACCCAAGAGGCACCACCTTTT...CAGATTTCCATAGTCACTTTCAGATACATTAAGTGGCAGATGGAAGGAGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp CACCACTGTGGAATAAGGTGGCACCAAAAGAATTCCACAGTCATGAGCAGCCCAAGCAAACCTGTAATCTaGGCCATTTTTGTAGACAAC +
Preference number: 5 (lower is better)
Translates to: HHCGIRWHQKNSTVMSSPSKPVI*AIFVDN
Trigger: GTTGTCTACAAAAATGGCCAAGATTACAGGTTTGCT...TGGGCTGCTCATGACTGTGGAATTCTTTTGGTGCCACCTTATTCCACAGTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GTGAATAGTTTAGGAAAGAACGCTTTCCGTACAGAACCTGTACTGTTCAACATACGGATCCAGTCACCCTaGTTGAAGTTGATGAGCCAG +
Preference number: 5 (lower is better)
Translates to: VNSLGKNAFRTEPVLFNIRIQSP*LKLMSQ
Trigger: CTGGCTCATCAACTTCAACAAGGGTGACTGGATCCG...TATGTTGAACAGTACAGGTTCTGTACGGAAAGCGTTCTTTCCTAAACTATTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp GTGAATAGTTTAGGAAAGAACGCTTTCCGTACAGAACCTGTACTGTTCAACATACCAGGAAGTGGTCTTTaGTCTTCAGCTGAGCCCCAA +
Preference number: 5 (lower is better)
Translates to: VNSLGKNAFRTEPVLFNIPGSGL*SSAEPQ
Trigger: TTGGGGCTCAGCTGAAGACAAAAGACCACTTCCTGG...TATGTTGAACAGTACAGGTTCTGTACGGAAAGCGTTCTTTCCTAAACTATTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 90 bp GTCAAACCACTCTGTCCATTCCACATCTTGAACCCATTCGCTGGATaGAGAAACATTGAAATGTTCACCATGCTCTGTCTGGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: VKPLCPFHILNPFAG*RNIEMFTMLCLEQF
Trigger: AAACTGTTCCAGACAGAGCATGGTGAACATTTCAATGTTTCTTCATCCAGCGAATGGGTTCAAGATGTGGAATGGACAGAGTGGTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp AAAATGCCTGTATATCGACTCTTGGTGAATAGTTTAGGAAAGAACGCTTTCCGTAGGGATGGGCACCACTaGGAAGATTTTGGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: KMPVYRLLVNSLGKNAFRRDGHH*EDFGFV
Trigger: CACAAAGCCAAAATCTTCCAAGTGGTGCCCATCCCT...ACGGAAAGCGTTCTTTCCTAAACTATTCACCAAGAGTCGATATACAGGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp AAAATGCCTGTATATCGACTCTTGGTGAATAGTTTAGGAAAGAACGCTTTCCGTTTGATGAGATTGTTGTaGGGATTCGCCATCCAGAAT +
Preference number: 5 (lower is better)
Translates to: KMPVYRLLVNSLGKNAFRLMRLL*GFAIQN
Trigger: ATTCTGGATGGCGAATCCCAACAACAATCTCATCAA...ACGGAAAGCGTTCTTTCCTAAACTATTCACCAAGAGTCGATATACAGGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS-3UTR CAA 90 bp ATGTACTCCTTCCATCTGCCACTTAATGTATCTGAAAGTGACTATGGAAATCTGATCTTTTCTTTCAACTaGAGACCTTTGTCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: MYSFHLPLNVSESDYGNLIFSFN*RPLSAP
Trigger: TGGGGCAGACAAAGGTCTCAAGTTGAAAGAAAAGAT...CAGATTTCCATAGTCACTTTCAGATACATTAAGTGGCAGATGGAAGGAGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp CAGGCATTGTTTAGGCGGAAGGCCAAGGCACTGGTGTaGCTGCCCTCGAGGGCCGCGAACTTGCGGAAGGTG +
Preference number: 6 (lower is better)
Translates to: QALFRRKAKALV*LPSRAANLRKV
Trigger: CACCTTCCGCAAGTTCGCGGCCCTCGAGGGCAGGCACACCAGTGCCTTGGCCTTCCGCCTAAACAATGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp CATTGTTTAGGCGGAAGGCCAAGGCACTGGTGTGCCTaGCCTCGAGGGCCGCGAACTTGCGGAAGGTGCAGT +
Preference number: 6 (lower is better)
Translates to: HCLGGRPRHWCA*PRGPRTCGRCS
Trigger: ACTGCACCTTCCGCAAGTTCGCGGCCCTCGAGGGCAGGCACACCAGTGCCTTGGCCTTCCGCCTAAACAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp TTTGCCAGGCATTGTTTAGGCGGAAGGCCAAGGCACTaGTGTGCCTGCCCTCGAGGGCCGCGAACTTGCGGA +
Preference number: 6 (lower is better)
Translates to: FARHCLGGRPRH*CACPRGPRTCG
Trigger: TCCGCAAGTTCGCGGCCCTCGAGGGCAGGCACACCAGTGCCTTGGCCTTCCGCCTAAACAATGCCTGGCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp AAGGCACTGGTGTGCCTGCCCTCGAGGGCCGCGAACTaGCGGAAGGTGCAGTTCTGGATGTTGATGGGGCCA +
Preference number: 6 (lower is better)
Translates to: KALVCLPSRAAN*RKVQFWMLMGP
Trigger: TGGCCCCATCAACATCCAGAACTGCACCTTCCGCAAGTTCGCGGCCCTCGAGGGCAGGCACACCAGTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp GCCCACTGCAGATGGCCCCTCTCCAGTCTGGGACATTaGTGCAGTCTGGGTGTCGGACCAGCCAGTTGTCGT +
Preference number: 6 (lower is better)
Translates to: AHCRWPLSSLGH*CSLGVGPASCR
Trigger: ACGACAACTGGCTGGTCCGACACCCAGACTGCATCAATGTCCCAGACTGGAGAGGGGCCATCTGCAGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp TGCATAGCGCCCACTGCAGATGGCCCCTCTCCAGTCTaGGACATTGATGCAGTCTGGGTGTCGGACCAGCCA +
Preference number: 6 (lower is better)
Translates to: CIAPTADGPSPV*DIDAVWVSDQP
Trigger: TGGCTGGTCCGACACCCAGACTGCATCAATGTCCCAGACTGGAGAGGGGCCATCTGCAGTGGGCGCTATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 90 bp GGGTACTCCGACACAGAGCCGTCCAGATCATGGAACACAGATGTCTaGTCCCCGTCCATGTCCAGCTGGTTGAACCAGGGCCCGGGCTCT +
Preference number: 6 (lower is better)
Translates to: GYSDTEPSRSWNTDV*SPSMSSWLNQGPGS
Trigger: AGAGCCCGGGCCCTGGTTCAACCAGCTGGACATGGACGGGGACAAGACATCTGTGTTCCATGATCTGGACGGCTCTGTGTCGGAGTACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp GCTGGTTCCCGAGGTTTCAGTGGGTCTGCGTCCTGGTaGGGGCTGTACCTGGCAGAGATGATGGAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: AGSRGFSGSASW*GLYLAEMMERK
Trigger: CTTCCTCTCCATCATCTCTGCCAGGTACAGCCCTCACCAGGACGCAGACCCACTGAAACCTCGGGAACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp AGAGCTGCCAGGGTATGCCCTGCAGAATGGCATTTCTaGAGCTGCCGTGGCTCACCACGTGACCTCGACTCC +
Preference number: 6 (lower is better)
Translates to: RAARVCPAEWHF*SCRGSPRDLDS
Trigger: GGAGTCGAGGTCACGTGGTGAGCCACGGCAGCTTCAGAAATGCCATTCTGCAGGGCATACCCTGGCAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp TTATGGCCAGGGCTCCAAGGCTGCAGCTCAGGACTCTaGTCAGGACACTCAGTTGCCACTGCAGATGAGGCC +
Preference number: 6 (lower is better)
Translates to: LWPGLQGCSSGL*SGHSVATADEA
Trigger: GGCCTCATCTGCAGTGGCAACTGAGTGTCCTGATCAGAGTCCTGAGCTGCAGCCTTGGAGCCCTGGCCATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp AGTGCTGGCAACAACCAGGGTGTCTCCAGGCCTCCATaGCCGCACATTGTCCACCAGACTCAGGATGGTGCT +
Preference number: 6 (lower is better)
Translates to: SAGNNQGVSRPP*PHIVHQTQDGA
Trigger: AGCACCATCCTGAGTCTGGTGGACAATGTGCGGTCATGGAGGCCTGGAGACACCCTGGTTGTTGCCAGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp CCTCCCTGTTCATCCAAATCTCCAGCCAGGTGGAAGTaGATTGGGTACTGGCCCACCAGCTGCTGCCCCATG +
Preference number: 6 (lower is better)
Translates to: PPCSSKSPARWK*IGYWPTSCCPM
Trigger: CATGGGGCAGCAGCTGGTGGGCCAGTACCCAATTCACTTCCACCTGGCTGGAGATTTGGATGAACAGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp CCATCCAGAATGTGGACACGGCATTGCAGTCCTGCCTaGGCTTGGGGATGTACCCTGGGTATGAGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: PSRMWTRHCSPA*AWGCTLGMSPL
Trigger: CAGAGGACTCATACCCAGGGTACATCCCCAAGCCCAGGCAGGACTGCAATGCCGTGTCCACATTCTGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp GAGCCAGGGTACTCCGACACAGAGCCGTCCAGATCATaGAACACAGATGTCTTGTCCCCGTCCATGTCCAGC +
Preference number: 6 (lower is better)
Translates to: EPGYSDTEPSRS*NTDVLSPSMSS
Trigger: GCTGGACATGGACGGGGACAAGACATCTGTGTTCCATGATCTGGACGGCTCTGTGTCGGAGTACCCTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp GATGGCCCCTCTCCAGTCTGGGACATTGATGCAGTCTaGGTGTCGGACCAGCCAGTTGTCGTCCTTAGTGAG +
Preference number: 6 (lower is better)
Translates to: DGPSPVWDIDAV*VSDQPVVVLSE
Trigger: CTCACTAAGGACGACAACTGGCTGGTCCGACACCCAGACTGCATCAATGTCCCAGACTGGAGAGGGGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp TTCCCTGCCACCTTGACCTGTGTAGAGGTGCAAGCTTaGCAGGGGAGCACCCGGAACTCTTCTGCCTGGTAC +
Preference number: 6 (lower is better)
Translates to: FPATLTCVEVQA*QGSTRNSSAWY
Trigger: GTACCAGGCAGAAGAGTTCCGGGTGCTCCCCTGCAAAGCTTGCACCTCTACACAGGTCAAGGTGGCAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 90 bp GTGCTGGCAACAACCAGGGTGTCTCCAGGCCTCCATGACCGCACATaGTCCACCAGACTCAGGATGGTGCTGTTTACGTTGGTGTCGATG +
Preference number: 6 (lower is better)
Translates to: VLATTRVSPGLHDRT*STRLRMVLFTLVSM
Trigger: CATCGACACCAACGTAAACAGCACCATCCTGAGTCTGGTGGACAATGTGCGGTCATGGAGGCCTGGAGACACCCTGGTTGTTGCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 90 bp CTGGGCTTGGGGATGTACCCTGGGTATGAGTCCTCTGTGATCACTTaGCACATCCTGCTATCCCGATCGGATGGGAGAAGGGTCCCTGAC +
Preference number: 6 (lower is better)
Translates to: LGLGMYPGYESSVIT*HILLSRSDGRRVPD
Trigger: GTCAGGGACCCTTCTCCCATCCGATCGGGATAGCAGGATGTGCAAAGTGATCACAGAGGACTCATACCCAGGGTACATCCCCAAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp CCCGGAACTCTTCTGCCTGGTACATCGAATAGTCAGTaGTGGCAACAACCAGGGTGTCTCCAGGCCTCCATG +
Preference number: 6 (lower is better)
Translates to: PGTLLPGTSNSQ*WQQPGCLQASM
Trigger: CATGGAGGCCTGGAGACACCCTGGTTGTTGCCAGCACTGACTATTCGATGTACCAGGCAGAAGAGTTCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp CAGATTGCTGCTCTTGTAGGCCTGGATGTACATCTGTaGATAGCGCCCACTGCAGATGGCCCCTCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: QIAALVGLDVHL*IAPTADGPSPV
Trigger: GACTGGAGAGGGGCCATCTGCAGTGGGCGCTATGCACAGATGTACATCCAGGCCTACAAGAGCAGCAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp AAAGTGTCGGATAATGGCTGGTTCCCGAGGTTTCAGTaGGTCTGCGTCCTGGTGAGGGCTGTACCTGGCAGA +
Preference number: 6 (lower is better)
Translates to: KVSDNGWFPRFQ*VCVLVRAVPGR
Trigger: TCTGCCAGGTACAGCCCTCACCAGGACGCAGACCCACTGAAACCTCGGGAACCAGCCATTATCCGACACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp TGTCTTCAGCTGAGCCCCAAAGAGCTTCCTGGGCATTaGCACATCCACTATGGCCCTCTCAGTGAACCTGGG +
Preference number: 6 (lower is better)
Translates to: CLQLSPKELPGH*HIHYGPLSEPG
Trigger: CCCAGGTTCACTGAGAGGGCCATAGTGGATGTGCCAATGCCCAGGAAGCTCTTTGGGGCTCAGCTGAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp AAGGCTGCAGCTCAGGACTCTGATCAGGACACTCAGTaGCCACTGCAGATGAGGCCCCTGAGAAGTTGGCCA +
Preference number: 6 (lower is better)
Translates to: KAAAQDSDQDTQ*PLQMRPLRSWP
Trigger: TGGCCAACTTCTCAGGGGCCTCATCTGCAGTGGCAACTGAGTGTCCTGATCAGAGTCCTGAGCTGCAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp CAGAATGTGGACACGGCATTGCAGTCCTGCCTGGGCTaGGGGATGTACCCTGGGTATGAGTCCTCTGTGATC +
Preference number: 6 (lower is better)
Translates to: QNVDTALQSCLG*GMYPGYESSVI
Trigger: GATCACAGAGGACTCATACCCAGGGTACATCCCCAAGCCCAGGCAGGACTGCAATGCCGTGTCCACATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp GACACAGAGCCGTCCAGATCATGGAACACAGATGTCTaGTCCCCGTCCATGTCCAGCTGGTTGAACCAGGGC +
Preference number: 6 (lower is better)
Translates to: DTEPSRSWNTDV*SPSMSSWLNQG
Trigger: GCCCTGGTTCAACCAGCTGGACATGGACGGGGACAAGACATCTGTGTTCCATGATCTGGACGGCTCTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 90 bp GCTTCGGCAGGCTCTGCCCCGGGTGTAGCAAGCAAACCTGTAATCTaGGCCATTTTTGTAGACAACCTCAGTGCTGAGGGCGACTCCATC +
Preference number: 6 (lower is better)
Translates to: ASAGSAPGVASKPVI*AIFVDNLSAEGDSI
Trigger: GATGGAGTCGCCCTCAGCACTGAGGTTGTCTACAAAAATGGCCAAGATTACAGGTTTGCTTGCTACACCCGGGGCAGAGCCTGCCGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 90 bp CATAGCCTCCCTGTTCATCCAAATCTCCAGCCAGGTGGAAGTGAATaGGGTACTGGCCCACCAGCTGCTGCCCCATGTACTTCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: HSLPVHPNLQPGGSE*GTGPPAAAPCTSAP
Trigger: TGGAGCTGAAGTACATGGGGCAGCAGCTGGTGGGCCAGTACCCAATTCACTTCCACCTGGCTGGAGATTTGGATGAACAGGGAGGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp GGTGCAAGCTTTGCAGGGGAGCACCCGGAACTCTTCTaGCTGGTACATCGAATAGTCAGTGCTGGCAACAAC +
Preference number: 6 (lower is better)
Translates to: GASFAGEHPELF*LVHRIVSAGNN
Trigger: GTTGTTGCCAGCACTGACTATTCGATGTACCAGGCAGAAGAGTTCCGGGTGCTCCCCTGCAAAGCTTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp ATGGGAAGGTTCCACCACTGGCCAGGGTCAGACCAATaGCATTATCAGCAAACCGACAGCTGTCCAGCCACA +
Preference number: 6 (lower is better)
Translates to: MGRFHHWPGSDQ*HYQQTDSCPAT
Trigger: TGTGGCTGGACAGCTGTCGGTTTGCTGATAATGGCATTGGTCTGACCCTGGCCAGTGGTGGAACCTTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp GGAACTCTTCTGCCTGGTACATCGAATAGTCAGTGCTaGCAACAACCAGGGTGTCTCCAGGCCTCCATGACC +
Preference number: 6 (lower is better)
Translates to: GTLLPGTSNSQC*QQPGCLQASMT
Trigger: GGTCATGGAGGCCTGGAGACACCCTGGTTGTTGCCAGCACTGACTATTCGATGTACCAGGCAGAAGAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp TGCTGCCCCATGTACTTCAGCTCCACGCCCTCCAAGTaGGCTGCTTTAAACCCCAGTGCAAACTTGATGTGG +
Preference number: 6 (lower is better)
Translates to: CCPMYFSSTPSK*AALNPSANLMW
Trigger: CCACATCAAGTTTGCACTGGGGTTTAAAGCAGCCCACTTGGAGGGCGTGGAGCTGAAGTACATGGGGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp AATAGGGAGGGTCCTTCCACTGTGGTCCAAGCCACCTaGACCCCAGATCCTGTTGTCCATCATTTCTGTGCC +
Preference number: 6 (lower is better)
Translates to: NREGPSTVVQAT*TPDPVVHHFCA
Trigger: GGCACAGAAATGATGGACAACAGGATCTGGGGTCCAGGTGGCTTGGACCACAGTGGAAGGACCCTCCCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp ACAGGGATGGGCACCACTTGGAAGATTTTGGCTTTGTaGTCCTCAGTCTCCAGAGTCACCCAGATGGGTCGG +
Preference number: 6 (lower is better)
Translates to: TGMGTTWKILAL*SSVSRVTQMGR
Trigger: CCGACCCATCTGGGTGACTCTGGAGACTGAGGACCACAAAGCCAAAATCTTCCAAGTGGTGCCCATCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp CTCCAAGGGTGTCTAAATCCAAGGTGGAGGAAGTGCTaGCTGCCCAGTTTGGTCATTGCCTTCCGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: LQGCLNPRWRKC*LPSLVIAFRAV
Trigger: CACAGCCCGGAAGGCAATGACCAAACTGGGCAGCAAGCACTTCCTCCACCTTGGATTTAGACACCCTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp CCTGTTCATCCAAATCTCCAGCCAGGTGGAAGTGAATaGGGTACTGGCCCACCAGCTGCTGCCCCATGTACT +
Preference number: 6 (lower is better)
Translates to: PVHPNLQPGGSE*GTGPPAAAPCT
Trigger: AGTACATGGGGCAGCAGCTGGTGGGCCAGTACCCAATTCACTTCCACCTGGCTGGAGATTTGGATGAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 90 bp GTGATGAAGCTCCAAGGGTGTCTAAATCCAAGGTGGAGGAAGTGCTaGCTGCCCAGTTTGGTCATTGCCTTCCGGGCTGTGTCATCCAGG +
Preference number: 6 (lower is better)
Translates to: VMKLQGCLNPRWRKC*LPSLVIAFRAVSSR
Trigger: CCTGGATGACACAGCCCGGAAGGCAATGACCAAACTGGGCAGCAAGCACTTCCTCCACCTTGGATTTAGACACCCTTGGAGCTTCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 90 bp CATGACCGCACATTGTCCACCAGACTCAGGATGGTGCTGTTTACGTaGGTGTCGATGCTAACCGTGAGCTTGGGCCTCACGGGTTTTCCA +
Preference number: 6 (lower is better)
Translates to: HDRTLSTRLRMVLFT*VSMLTVSLGLTGFP
Trigger: TGGAAAACCCGTGAGGCCCAAGCTCACGGTTAGCATCGACACCAACGTAAACAGCACCATCCTGAGTCTGGTGGACAATGTGCGGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 90 bp AGATCATGGAACACAGATGTCTTGTCCCCGTCCATGTCCAGCTGGTaGAACCAGGGCCCGGGCTCTCCGAAGAACACTCTGGAAGTAATC +
Preference number: 6 (lower is better)
Translates to: RSWNTDVLSPSMSSW*NQGPGSPKNTLEVI
Trigger: GATTACTTCCAGAGTGTTCTTCGGAGAGCCCGGGCCCTGGTTCAACCAGCTGGACATGGACGGGGACAAGACATCTGTGTTCCATGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp TGGGCTTGGGGATGTACCCTGGGTATGAGTCCTCTGTaGTCACTTTGCACATCCTGCTATCCCGATCGGATG +
Preference number: 6 (lower is better)
Translates to: WAWGCTLGMSPL*SLCTSCYPDRM
Trigger: CATCCGATCGGGATAGCAGGATGTGCAAAGTGATCACAGAGGACTCATACCCAGGGTACATCCCCAAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp CACATAAGAATCGCACTCGATAGCTTCGGCAGGCTCTaGCCCGGGTGTAGCAAGCAAACCTGTAATCTTGGC +
Preference number: 6 (lower is better)
Translates to: HIRIALDSFGRL*PGCSKQTCNLG
Trigger: GCCAAGATTACAGGTTTGCTTGCTACACCCGGGGCAGAGCCTGCCGAAGCTATCGAGTGCGATTCTTATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp CGTGACCTCGACTCCCATCAATCACCACTATCTGGATaGCATCTTCTGAGCAAGGGTACCTCCTCCCATCCA +
Preference number: 6 (lower is better)
Translates to: RDLDSHQSPLSG*HLLSKGTSSHP
Trigger: TGGATGGGAGGAGGTACCCTTGCTCAGAAGATGGCATCCAGATAGTGGTGATTGATGGGAGTCGAGGTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp CTGTTCATCCAAATCTCCAGCCAGGTGGAAGTGAATTaGGTACTGGCCCACCAGCTGCTGCCCCATGTACTT +
Preference number: 6 (lower is better)
Translates to: LFIQISSQVEVN*VLAHQLLPHVL
Trigger: AAGTACATGGGGCAGCAGCTGGTGGGCCAGTACCCAATTCACTTCCACCTGGCTGGAGATTTGGATGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp GAGGCCAAGGCAGTGGTCAAAAGTGTTGCGTTCCTCTaGCCCATCTTCAGTGAAGAAGCAGTGGCCCAAAGA +
Preference number: 6 (lower is better)
Translates to: EAKAVVKSVAFL*PIFSEEAVAQR
Trigger: TCTTTGGGCCACTGCTTCTTCACTGAAGATGGGCCAGAGGAACGCAACACTTTTGACCACTGCCTTGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp CTGGTTCTTGTAGGCAGTAAAGTGTCGGATAATGGCTaGTTCCCGAGGTTTCAGTGGGTCTGCGTCCTGGTG +
Preference number: 6 (lower is better)
Translates to: LVLVGSKVSDNG*FPRFQWVCVLV
Trigger: CACCAGGACGCAGACCCACTGAAACCTCGGGAACCAGCCATTATCCGACACTTTACTGCCTACAAGAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp AGCCGTGGCTGTGCAGTCGCTGATGCCTGCATTCCTTaGGAGCAGAGCTTTAATCTTGATTCTCTCACAGCC +
Preference number: 6 (lower is better)
Translates to: SRGCAVADACIP*EQSFNLDSLTA
Trigger: GGCTGTGAGAGAATCAAGATTAAAGCTCTGCTCCCAAGGAATGCAGGCATCAGCGACTGCACAGCCACGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp GGCTCTGCCCCGGGTGTAGCAAGCAAACCTGTAATCTaGGCCATTTTTGTAGACAACCTCAGTGCTGAGGGC +
Preference number: 6 (lower is better)
Translates to: GSAPGVASKPVI*AIFVDNLSAEG
Trigger: GCCCTCAGCACTGAGGTTGTCTACAAAAATGGCCAAGATTACAGGTTTGCTTGCTACACCCGGGGCAGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp TCCCCAATATGTAGGTACTGTGGTTTCCCTGCCACCTaGACCTGTGTAGAGGTGCAAGCTTTGCAGGGGAGC +
Preference number: 6 (lower is better)
Translates to: SPICRYCGFPAT*TCVEVQALQGS
Trigger: GCTCCCCTGCAAAGCTTGCACCTCTACACAGGTCAAGGTGGCAGGGAAACCACAGTACCTACATATTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp GGGATGTACCCTGGGTATGAGTCCTCTGTGATCACTTaGCACATCCTGCTATCCCGATCGGATGGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: GMYPGYESSVIT*HILLSRSDGRR
Trigger: CCTTCTCCCATCCGATCGGGATAGCAGGATGTGCAAAGTGATCACAGAGGACTCATACCCAGGGTACATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp CTGGCAGAGATGATGGAGAGGAAGGGCCGTTTATCCTaGGCTGAGGCCTCAGTTGTCTTGACTCCGTTGTCT +
Preference number: 6 (lower is better)
Translates to: LAEMMERKGRLS*AEASVVLTPLS
Trigger: AGACAACGGAGTCAAGACAACTGAGGCCTCAGCCAAGGATAAACGGCCCTTCCTCTCCATCATCTCTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp ACCACAGGGATGGGCACCACTTGGAAGATTTTGGCTTaGTGGTCCTCAGTCTCCAGAGTCACCCAGATGGGT +
Preference number: 6 (lower is better)
Translates to: TTGMGTTWKILA*WSSVSRVTQMG
Trigger: ACCCATCTGGGTGACTCTGGAGACTGAGGACCACAAAGCCAAAATCTTCCAAGTGGTGCCCATCCCTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 90 bp CAAGGGTGTCTAAATCCAAGGTGGAGGAAGTGCTTGCTGCCCAGTTaGGTCATTGCCTTCCGGGCTGTGTCATCCAGGTTTCTAGAGCCT +
Preference number: 6 (lower is better)
Translates to: QGCLNPRWRKCLLPS*VIAFRAVSSRFLEP
Trigger: AGGCTCTAGAAACCTGGATGACACAGCCCGGAAGGCAATGACCAAACTGGGCAGCAAGCACTTCCTCCACCTTGGATTTAGACACCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 90 bp AGGGTCCCTGACTTAACAAGGAGGCCAAGGCAGTGGTCAAAAGTGTaGCGTTCCTCTGGCCCATCTTCAGTGAAGAAGCAGTGGCCCAAA +
Preference number: 6 (lower is better)
Translates to: RVPDLTRRPRQWSKV*RSSGPSSVKKQWPK
Trigger: TTTGGGCCACTGCTTCTTCACTGAAGATGGGCCAGAGGAACGCAACACTTTTGACCACTGCCTTGGCCTCCTTGTTAAGTCAGGGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 90 bp GGGCTGTACCTGGCAGAGATGATGGAGAGGAAGGGCCGTTTATCCTaGGCTGAGGCCTCAGTTGTCTTGACTCCGTTGTCTATGATCATG +
Preference number: 6 (lower is better)
Translates to: GLYLAEMMERKGRLS*AEASVVLTPLSMIM
Trigger: CATGATCATAGACAACGGAGTCAAGACAACTGAGGCCTCAGCCAAGGATAAACGGCCCTTCCTCTCCATCATCTCTGCCAGGTACAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp AGAATGGCATTTCTGAAGCTGCCGTGGCTCACCACGTaGCCTCGACTCCCATCAATCACCACTATCTGGATG +
Preference number: 6 (lower is better)
Translates to: RMAFLKLPWLTT*PRLPSITTIWM
Trigger: CATCCAGATAGTGGTGATTGATGGGAGTCGAGGTCACGTGGTGAGCCACGGCAGCTTCAGAAATGCCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp CCTGGTCCATGGGCCTCTGGTGATGTATCTGCCCTTTaGTGCCATGAGCACTATGGAATTGTCAGGGATAGC +
Preference number: 6 (lower is better)
Translates to: PGPWASGDVSAL*CHEHYGIVRDS
Trigger: GCTATCCCTGACAATTCCATAGTGCTCATGGCATCAAAGGGCAGATACATCACCAGAGGCCCATGGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp CACCTGGACCCCAGATCCTGTTGTCCATCATTTCTGTaGCCACATTGCCACTCTCGCCAACAAACAAGCTGT +
Preference number: 6 (lower is better)
Translates to: HLDPRSCCPSFL*PHCHSRQQTSC
Trigger: ACAGCTTGTTTGTTGGCGAGAGTGGCAATGTGGGCACAGAAATGATGGACAACAGGATCTGGGGTCCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp GCAACCCAGAATCCTCATCCCAGTAGTAGTGGCTCCTaGCAGGATAGCTCTGCTCAACTTTGTCCATCTGCA +
Preference number: 6 (lower is better)
Translates to: ATQNPHPSSSGS*QDSSAQLCPSA
Trigger: TGCAGATGGACAAAGTTGAGCAGAGCTATCCTGGCAGGAGCCACTACTACTGGGATGAGGATTCTGGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp GAACGCCATCTTTTCTTTCAACTTGAGACCTTTGTCTaGCCCAAGCTTTTCCAGCACCCTGGTCCATGGGCC +
Preference number: 6 (lower is better)
Translates to: ERHLFFQLETFV*PKLFQHPGPWA
Trigger: GGCCCATGGACCAGGGTGCTGGAAAAGCTTGGGGCAGACAAAGGTCTCAAGTTGAAAGAAAAGATGGCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp CTAAATCCAAGGTGGAGGAAGTGCTTGCTGCCCAGTTaGGTCATTGCCTTCCGGGCTGTGTCATCCAGGTTT +
Preference number: 6 (lower is better)
Translates to: LNPRWRKCLLPS*VIAFRAVSSRF
Trigger: AAACCTGGATGACACAGCCCGGAAGGCAATGACCAAACTGGGCAGCAAGCACTTCCTCCACCTTGGATTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 90 bp TGGTCCTCAGTCTCCAGAGTCACCCAGATGGGTCGGAAGCTGCCTTaGAAGCCGACGAACGCCATCTTTTCTTTCAACTTGAGACCTTTG +
Preference number: 6 (lower is better)
Translates to: WSSVSRVTQMGRKLP*KPTNAIFSFNLRPL
Trigger: CAAAGGTCTCAAGTTGAAAGAAAAGATGGCGTTCGTCGGCTTCAAAGGCAGCTTCCGACCCATCTGGGTGACTCTGGAGACTGAGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 90 bp ACATTGCCACTCTCGCCAACAAACAAGCTGTTCTTTATCTCCTGCTaGGAGCCATCATCATATGGGAAGGTTCCACCACTGGCCAGGGTC +
Preference number: 6 (lower is better)
Translates to: TLPLSPTNKLFFISC*EPSSYGKVPPLARV
Trigger: GACCCTGGCCAGTGGTGGAACCTTCCCATATGATGATGGCTCCAAGCAGGAGATAAAGAACAGCTTGTTTGTTGGCGAGAGTGGCAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 90 bp CCACCTGGACCCCAGATCCTGTTGTCCATCATTTCTGTGCCCACATaGCCACTCTCGCCAACAAACAAGCTGTTCTTTATCTCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: PPGPQILLSIISVPT*PLSPTNKLFFISCL
Trigger: CAAGCAGGAGATAAAGAACAGCTTGTTTGTTGGCGAGAGTGGCAATGTGGGCACAGAAATGATGGACAACAGGATCTGGGGTCCAGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp GGGACATCCTCAAAGGCTATGTTGGTCACATTGTTGTaGGGGCAGCTTTGCCAGGCATTGTTTAGGCGGAAG +
Preference number: 6 (lower is better)
Translates to: GTSSKAMLVTLL*GQLCQALFRRK
Trigger: CTTCCGCCTAAACAATGCCTGGCAAAGCTGCCCTCACAACAATGTGACCAACATAGCCTTTGAGGATGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp ACAGTGATGAAGCTCCAAGGGTGTCTAAATCCAAGGTaGAGGAAGTGCTTGCTGCCCAGTTTGGTCATTGCC +
Preference number: 6 (lower is better)
Translates to: TVMKLQGCLNPR*RKCLLPSLVIA
Trigger: GGCAATGACCAAACTGGGCAGCAAGCACTTCCTCCACCTTGGATTTAGACACCCTTGGAGCTTCATCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp GTAGAATTTACCCAGTGGAATGTGCTCAGAATAACCTaGAGAGTACATTCCCACAGAGGGGCCCGTTGGCAC +
Preference number: 6 (lower is better)
Translates to: VEFTQWNVLRIT*RVHSHRGARWH
Trigger: GTGCCAACGGGCCCCTCTGTGGGAATGTACTCTCCAGGTTATTCTGAGCACATTCCACTGGGTAAATTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp GCTGTTCTTTATCTCCTGCTTGGAGCCATCATCATATaGGAAGGTTCCACCACTGGCCAGGGTCAGACCAAT +
Preference number: 6 (lower is better)
Translates to: AVLYLLLGAIII*EGSTTGQGQTN
Trigger: ATTGGTCTGACCCTGGCCAGTGGTGGAACCTTCCCATATGATGATGGCTCCAAGCAGGAGATAAAGAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp GACTTAACAAGGAGGCCAAGGCAGTGGTCAAAAGTGTaGCGTTCCTCTGGCCCATCTTCAGTGAAGAAGCAG +
Preference number: 6 (lower is better)
Translates to: DLTRRPRQWSKV*RSSGPSSVKKQ
Trigger: CTGCTTCTTCACTGAAGATGGGCCAGAGGAACGCAACACTTTTGACCACTGCCTTGGCCTCCTTGTTAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp AGAGATGATGGAGAGGAAGGGCCGTTTATCCTTGGCTaGGGCCTCAGTTGTCTTGACTCCGTTGTCTATGAT +
Preference number: 6 (lower is better)
Translates to: RDDGEEGPFILG*GLSCLDSVVYD
Trigger: ATCATAGACAACGGAGTCAAGACAACTGAGGCCTCAGCCAAGGATAAACGGCCCTTCCTCTCCATCATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp GTCTACTCCGATGTACTTCAGGCCATAGTAAGGGTCTaGCAGGATGTTTTCATCAGCCCTTCCATACAGCAC +
Preference number: 6 (lower is better)
Translates to: VYSDVLQAIVRV*QDVFISPSIQH
Trigger: GTGCTGTATGGAAGGGCTGATGAAAACATCCTGCCAGACCCTTACTATGGCCTGAAGTACATCGGAGTAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp GGGCGACTCCATCCATTGTTGTGGCCTGTATATCAATaGGTCGATTGCAGATTTTTCCTGGGTAAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: GRLHPLLWPVYQ*VDCRFFLGKLL
Trigger: GAGCAGCTTACCCAGGAAAAATCTGCAATCGACCCATTGATATACAGGCCACAACAATGGATGGAGTCGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp TGTCCATCTGCAGAGTCCTCACAAAGGTCCCAGTCTTaGACGTTTGCTTTAGCAGGCGATTGTGAACATCTG +
Preference number: 6 (lower is better)
Translates to: CPSAESSQRSQS*TFALAGDCEHL
Trigger: CAGATGTTCACAATCGCCTGCTAAAGCAAACGTCCAAGACTGGGACCTTTGTGAGGACTCTGCAGATGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 90 bp GTGCAGTCGCTGATGCCTGCATTCCTTGGGAGCAGAGCTTTAATCTaGATTCTCTCACAGCCCTTCATGGAGCAGAAAGCAAATTTCTCC +
Preference number: 6 (lower is better)
Translates to: VQSLMPAFLGSRALI*ILSQPFMEQKANFS
Trigger: GGAGAAATTTGCTTTCTGCTCCATGAAGGGCTGTGAGAGAATCAAGATTAAAGCTCTGCTCCCAAGGAATGCAGGCATCAGCGACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp GGATGTTTTCATCAGCCCTTCCATACAGCACAATACTaGAATTGCCCTCAAAAGGGCAAAGGGCACTCCCAG +
Preference number: 6 (lower is better)
Translates to: GCFHQPFHTAQY*NCPQKGKGHSQ
Trigger: CTGGGAGTGCCCTTTGCCCTTTTGAGGGCAATTTCAGTATTGTGCTGTATGGAAGGGCTGATGAAAACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp AACAGTTTGAAAACCCGGGCAGCAGCCGAGCCTTTGTaGCCATGGTATTCAATGTGGTCTTCAACTGAAGAG +
Preference number: 6 (lower is better)
Translates to: NSLKTRAAAEPL*PWYSMWSSTEE
Trigger: CTCTTCAGTTGAAGACCACATTGAATACCATGGTCACAAAGGCTCGGCTGCTGCCCGGGTTTTCAAACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp GGTCAAAAGTGTTGCGTTCCTCTGGCCCATCTTCAGTaGAGAAGCAGTGGCCCAAAGAATTATAGCCCACAA +
Preference number: 6 (lower is better)
Translates to: GQKCCVPLAHLQ*RSSGPKNYSPQ
Trigger: TTGTGGGCTATAATTCTTTGGGCCACTGCTTCTTCACTGAAGATGGGCCAGAGGAACGCAACACTTTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp TCATCAATCAGGATGTACCGGGTACGCAGCACAATGTaGTCATGGTGGTCTTTAATGACAAGCTTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: SSIRMYRVRSTM*SWWSLMTSFPP
Trigger: GGGAGGAAAGCTTGTCATTAAAGACCACCATGAGCACATTGTGCTGCGTACCCGGTACATCCTGATTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp AAGCTGCTCGCAGATCTGAAATTTTCTCCCCACCTTTaGTCTGAGGCACCTTATCATGGTCAAACCACTCTG +
Preference number: 6 (lower is better)
Translates to: KLLADLKFSPHL*SEAPYHGQTTL
Trigger: CAGAGTGGTTTGACCATGATAAGGTGCCTCAGAGCAAAGGTGGGGAGAAAATTTCAGATCTGCGAGCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp AATGAACCAAAATCCAGTTTCCTCGGACCCTGCAGCTaGGCAGTTGATGAGATTGTTGTTGGGATTCGCCAT +
Preference number: 6 (lower is better)
Translates to: NEPKSSFLGPCS*AVDEIVVGIRH
Trigger: ATGGCGAATCCCAACAACAATCTCATCAACTGCGCAGCTGCAGGGTCCGAGGAAACTGGATTTTGGTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp CAAAGGTATCGAAGTCAAAGAAGTCACAGATGTGATTaGTGTAGGGGTAGCATCTGTCCTCCATCTCCCCCA +
Preference number: 6 (lower is better)
Translates to: QRYRSQRSHRCD*CRGSICPPSPP
Trigger: TGGGGGAGATGGAGGACAGATGCTACCCCTACACCAATCACATCTGTGACTTCTTTGACTTCGATACCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp TTTTCATCAGCCCTTCCATACAGCACAATACTGAAATaGCCCTCAAAAGGGCAAAGGGCACTCCCAGCATGC +
Preference number: 6 (lower is better)
Translates to: FSSALPYSTILK*PSKGQRALPAC
Trigger: GCATGCTGGGAGTGCCCTTTGCCCTTTTGAGGGCAATTTCAGTATTGTGCTGTATGGAAGGGCTGATGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp CTCTCGCCAACAAACAAGCTGTTCTTTATCTCCTGCTaGGAGCCATCATCATATGGGAAGGTTCCACCACTG +
Preference number: 6 (lower is better)
Translates to: LSPTNKLFFISC*EPSSYGKVPPL
Trigger: CAGTGGTGGAACCTTCCCATATGATGATGGCTCCAAGCAGGAGATAAAGAACAGCTTGTTTGTTGGCGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CAA 72 bp CCCCAGATCCTGTTGTCCATCATTTCTGTGCCCACATaGCCACTCTCGCCAACAAACAAGCTGTTCTTTATC +
Preference number: 6 (lower is better)
Translates to: PQILLSIISVPT*PLSPTNKLFFI
Trigger: GATAAAGAACAGCTTGTTTGTTGGCGAGAGTGGCAATGTGGGCACAGAAATGATGGACAACAGGATCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp ACTCCCATCAATCACCACTATCTGGATGCCATCTTCTaGGCAAGGGTACCTCCTCCCATCCACTTCAATATA +
Preference number: 6 (lower is better)
Translates to: TPINHHYLDAIF*ARVPPPIHFNI
Trigger: TATATTGAAGTGGATGGGAGGAGGTACCCTTGCTCAGAAGATGGCATCCAGATAGTGGTGATTGATGGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp CCCAGATCCTGTTGTCCATCATTTCTGTGCCCACATTaGCACTCTCGCCAACAAACAAGCTGTTCTTTATCT +
Preference number: 6 (lower is better)
Translates to: PRSCCPSFLCPH*HSRQQTSCSLS
Trigger: AGATAAAGAACAGCTTGTTTGTTGGCGAGAGTGGCAATGTGGGCACAGAAATGATGGACAACAGGATCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS TCA 72 bp GCCTTTGTGACCATGGTATTCAATGTGGTCTTCAACTaGAGAGGAGGGATTTCCTTTCACAGTGATGAAGCT +
Preference number: 6 (lower is better)
Translates to: AFVTMVFNVVFN*RGGISFHSDEA
Trigger: AGCTTCATCACTGTGAAAGGAAATCCCTCCTCTTCAGTTGAAGACCACATTGAATACCATGGTCACAAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS GCA 72 bp GTTGTCTATGATCATGCCAGCCCGGTAGTTAGAATGTaGTCGATTGTTGTAGAATTTACCCAGTGGAATGTG +
Preference number: 6 (lower is better)
Translates to: VVYDHASPVVRM*SIVVEFTQWNV
Trigger: CACATTCCACTGGGTAAATTCTACAACAATCGAGCACATTCTAACTACCGGGCTGGCATGATCATAGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp GTTAGAATGTGCTCGATTGTTGTAGAATTTACCCAGTaGAATGTGCTCAGAATAACCTGGAGAGTACATTCC +
Preference number: 6 (lower is better)
Translates to: VRMCSIVVEFTQ*NVLRITWRVHS
Trigger: GGAATGTACTCTCCAGGTTATTCTGAGCACATTCCACTGGGTAAATTCTACAACAATCGAGCACATTCTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12
CDS CCA 72 bp TTCATGGAGCAGAAAGCAAATTTCTCCCTTTCGTTCTaGGCTTTTAATTTCAAGAAGAGCAACCCAGAATCC +
Preference number: 6 (lower is better)
Translates to: FMEQKANFSLSF*AFNFKKSNPES
Trigger: GGATTCTGGGTTGCTCTTCTTGAAATTAAAAGCCCAGAACGAAAGGGAGAAATTTGCTTTCTGCTCCATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064174.12