Pregenerated sensors for CELSR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068740Ensembl transcript IDs: ENSMUST00000090558.10, ENSMUST00000090558.11, ENSMUST00000147251.2
Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GAACCCAGACCTGGCACCTGTGCTGGGGGCCCCTCAGGGCCACCATaGCAGCTCTGCGCTTACCCTTCCTCCTGGGACCGCCCACACAGC | + |
Preference number: 1 (lower is better) Translates to: EPRPGTCAGGPSGPP*QLCAYPSSWDRPHS Trigger: GCTGTGTGGGCGGTCCCAGGAGGAAGGGTAAGCGCAGAGCTGGCATGGTGGCCCTGAGGGGCCCCCAGCACAGGTGCCAGGTCTGGGTTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR GCA 90 bp | CCTGGCACCTGTGCTGGGGGCCCCTCAGGGCCACCATGCCAGCTCTaGGCTTACCCTTCCTCCTGGGACCGCCCACACAGCAAAGAAGCA | + |
Preference number: 1 (lower is better) Translates to: PGTCAGGPSGPPCQL*AYPSSWDRPHSKEA Trigger: TGCTTCTTTGCTGTGTGGGCGGTCCCAGGAGGAAGGGTAAGCGCAGAGCTGGCATGGTGGCCCTGAGGGGCCCCCAGCACAGGTGCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR TCA 90 bp | GGAGCTGGACTCCGCTTAGCCCAACTGCCAAGCAGAGTAGCCCGGTaGAGCTCAGAGGCAGCAGTGGGTCAGTGGCTTGGGTTAGCAAGG | + |
Preference number: 1 (lower is better) Translates to: GAGLRLAQLPSRVAR*SSEAAVGQWLGLAR Trigger: CCTTGCTAACCCAAGCCACTGACCCACTGCTGCCTCTGAGCTTCACCGGGCTACTCTGCTTGGCAGTTGGGCTAAGCGGAGTCCAGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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3UTR CCA 90 bp | GTCCCTCTCCTCCCAGAGGCACAGGAGATGAAACTGAAGAGAGGCTaGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAG | + |
Preference number: 1 (lower is better) Translates to: VPLLPEAQEMKLKRG*DTSWVVLSSLGRGK Trigger: CTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGTTTCATCTCCTGTGCCTCTGGGAGGAGAGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR CCA 90 bp | CCTCCTGGGACCGCCCACACAGCAAAGAAGCAATGGAAGAGTGACTaGCCCTACCTGCAAGGGTGGGCAGGAGAAATGAAGCACTTTGGG | + |
Preference number: 1 (lower is better) Translates to: PPGTAHTAKKQWKSD*PYLQGWAGEMKHFG Trigger: CCCAAAGTGCTTCATTTCTCCTGCCCACCCTTGCAGGTAGGGCCAGTCACTCTTCCATTGCTTCTTTGCTGTGTGGGCGGTCCCAGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR TCA 90 bp | CCTTCCTCCTGGGACCGCCCACACAGCAAAGAAGCAATGGAAGAGTaGCTGGCCCTACCTGCAAGGGTGGGCAGGAGAAATGAAGCACTT | + |
Preference number: 1 (lower is better) Translates to: PSSWDRPHSKEAMEE*LALPARVGRRNEAL Trigger: AAGTGCTTCATTTCTCCTGCCCACCCTTGCAGGTAGGGCCAGTCACTCTTCCATTGCTTCTTTGCTGTGTGGGCGGTCCCAGGAGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR TCA 90 bp | CAGGTGAGAATCCATGGCAGAAAAGCCAGCGGCCAGCCTTCCAAATaGGAGACAGGGACATCTTTCCTGCCTCCTCGAGCCTTTATTCTA | + |
Preference number: 1 (lower is better) Translates to: QVRIHGRKASGQPSK*ETGTSFLPPRAFIL Trigger: TAGAATAAAGGCTCGAGGAGGCAGGAAAGATGTCCCTGTCTCTCATTTGGAAGGCTGGCCGCTGGCTTTTCTGCCATGGATTCTCACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR CCA 90 bp | ATTAACTCTCTCTTCGCAGGGAGCTGGGGTCAAGTAGGGGGACAATaGGGACCAAGGACCTGGTTCTTTGAAGAAGAGAGCCAATTCCAG | + |
Preference number: 1 (lower is better) Translates to: INSLFAGSWGQVGGQ*GPRTWFFEEESQFQ Trigger: CTGGAATTGGCTCTCTTCTTCAAAGAACCAGGTCCTTGGTCCCCATTGTCCCCCTACTTGACCCCAGCTCCCTGCGAAGAGAGAGTTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR TCA 90 bp | AGTGACAAGTCTGGAATACATGCTCAGAGGAGAGGGGGACTCAAATaGACGGTGGTTGCAAAAACCCGAGGAGAGCAAATGGAGCGAGAG | + |
Preference number: 1 (lower is better) Translates to: SDKSGIHAQRRGGLK*TVVAKTRGEQMERE Trigger: CTCTCGCTCCATTTGCTCTCCTCGGGTTTTTGCAACCACCGTTCATTTGAGTCCCCCTCTCCTCTGAGCATGTATTCCAGACTTGTCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR GCA 90 bp | TGGAATACATGCTCAGAGGAGAGGGGGACTCAAATGAACGGTGGTTaGAAAAACCCGAGGAGAGCAAATGGAGCGAGAGGAAGGATGGTA | + |
Preference number: 1 (lower is better) Translates to: WNTCSEERGTQMNGG*KNPRRANGARGRMV Trigger: TACCATCCTTCCTCTCGCTCCATTTGCTCTCCTCGGGTTTTTGCAACCACCGTTCATTTGAGTCCCCCTCTCCTCTGAGCATGTATTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR CCA 90 bp | AGTCTGGAATACATGCTCAGAGGAGAGGGGGACTCAAATGAACGGTaGTTGCAAAAACCCGAGGAGAGCAAATGGAGCGAGAGGAAGGAT | + |
Preference number: 1 (lower is better) Translates to: SLEYMLRGEGDSNER*LQKPEESKWSERKD Trigger: ATCCTTCCTCTCGCTCCATTTGCTCTCCTCGGGTTTTTGCAACCACCGTTCATTTGAGTCCCCCTCTCCTCTGAGCATGTATTCCAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR-3UTR CCA 90 bp | GTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCCGGAAGGCAGGCAGGTaGGCGGTAGGGAGCAGGGGC | + |
Preference number: 2 (lower is better) Translates to: VQGPGSSDGRFVAAASEGRKAGR*AVGSRG Trigger: GCCCCTGCTCCCTACCGCCCACCTGCCTGCCTTCCG...GCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.10 ENSMUST00000147251.2 |
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3UTR-3UTR CCA 90 bp | TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTCGGAAGGCAGGCAGGTaGGCGGTAGGGAGCAGGGGC | + |
Preference number: 2 (lower is better) Translates to: SSDGRFVAAASEGRQVGGRKAGR*AVGSRG Trigger: GCCCCTGCTCCCTACCGCCCACCTGCCTGCCTTCCG...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.10 ENSMUST00000147251.2 |
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3UTR-3UTR CCA 90 bp | CAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCAGTGAGGGGGAGGTaGGGGAGGGACTTGGCACTA | + |
Preference number: 2 (lower is better) Translates to: QAPQMDGSSLLLRKAGRWAVRGR*GRDLAL Trigger: TAGTGCCAAGTCCCTCCCCCACCTCCCCCTCACTGC...CCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090558.10 ENSMUST00000147251.2 |
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3UTR-3UTR GCA 90 bp | TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGTTGGCCTTCTGGGTaGAAGGCCCAGGCTCCTCAG | + |
Preference number: 2 (lower is better) Translates to: SSDGRFVAAASEGRQVGGSWPSG*KAQAPQ Trigger: CTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACT...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.10 ENSMUST00000147251.2 |
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3UTR-3UTR CCA 90 bp | TGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCACCCAGGCTCCTCAGATaGACGGTTCGTCGCTGCTGC | + |
Preference number: 2 (lower is better) Translates to: CKAQAPQMDGSSLLLRKAPRLLR*TVRRCC Trigger: GCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGG...TGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.10 ENSMUST00000147251.2 |
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3UTR-3UTR CCA 90 bp | GATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGAGGGACTTGGCACTAGTTaGCCTTCTGGGTGCAAGGCC | + |
Preference number: 2 (lower is better) Translates to: DGRFVAAASEGRQVGGREGLGTS*PSGCKA Trigger: GGCCTTGCACCCAGAAGGCCAACTAGTGCCAAGTCC...CTCCCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.10 ENSMUST00000147251.2 |
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3UTR-3UTR GCA 90 bp | CCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTAGTTGGCCTTCTGGGTaGAAGGCCCAGGCTCCTCAG | + |
Preference number: 2 (lower is better) Translates to: PGWSCPLWEGERGVHFRRSWPSG*KAQAPQ Trigger: CTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACT...ACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090558.10 ENSMUST00000147251.2 |
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3UTR-3UTR CCA 90 bp | ACTGAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGCCCAGGCTCCTCAGATaGACGGTTCGTCGCTGCTGC | + |
Preference number: 2 (lower is better) Translates to: TEERLGHVLGGPVLFGKGPRLLR*TVRRCC Trigger: GCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGG...CCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.10 ENSMUST00000147251.2 |
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3UTR-3UTR CCA 90 bp | AGGGACTTGGCACTAGTTGGCCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGGCAGTGAGGGGGAGGTaGGGGAGGGACTTGGCACTA | + |
Preference number: 2 (lower is better) Translates to: RDLALVGLLGARPRLLRWAVRGR*GRDLAL Trigger: TAGTGCCAAGTCCCTCCCCCACCTCCCCCTCACTGC...CCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACTAGTGCCAAGTCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090558.10 ENSMUST00000147251.2 |
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3UTR-3UTR CCA 90 bp | TCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGCAGCAGTGGGTCAGTaGCTTGGGTTAGCAAGGACC | + |
Preference number: 2 (lower is better) Translates to: SDGRFVAAASEGRQVGGRAAVGQ*LGLART Trigger: GGTCCTTGCTAACCCAAGCCACTGACCCACTGCTGC...CCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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3UTR-3UTR CCA 90 bp | GCGAGAGGAAGGATGGTAGGCCCCAAATCCAGGGCTGCCAGGGACTCACCCAGCCTGGGCTGTAGCACATaGCCAGAGTCCAGGAAAAGG | + |
Preference number: 2 (lower is better) Translates to: ARGRMVGPKSRAARDSPSLGCST*PESRKR Trigger: CCTTTTCCTGGACTCTGGCCATGTGCTACAGCCCAG...GCTGGGTGAGTCCCTGGCAGCCCTGGATTTGGGGCCTACCATCCTTCCTCTCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR-3UTR CCA 90 bp | CCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTGAGCACCATGTTGTCTaGGCGCACAAGGGAGCTGGA | + |
Preference number: 2 (lower is better) Translates to: PSGCKAQAPQMDGSSLLLEHHVV*AHKGAG Trigger: TCCAGCTCCCTTGTGCGCCCAGACAACATGGTGCTC...AAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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3UTR-3UTR CCA 90 bp | TGCAAAAACCCGAGGAGAGCAAATGGAGCGAGAGGAAGGATGGTAGGCCCCAAAAGCAGAACCCAGACCTaGCACCTGTGCTGGGGGCCC | + |
Preference number: 2 (lower is better) Translates to: CKNPRRANGARGRMVGPKSRTQT*HLCWGP Trigger: GGGCCCCCAGCACAGGTGCCAGGTCTGGGTTCTGCT...TTTGGGGCCTACCATCCTTCCTCTCGCTCCATTTGCTCTCCTCGGGTTTTTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR-3UTR TCA 90 bp | TGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCACAACAGAGGGGACAGTaGACAGCTTCCACCAGAAAA | + |
Preference number: 2 (lower is better) Translates to: CKAQAPQMDGSSLLLRKAQQRGQ*TASTRK Trigger: TTTTCTGGTGGAAGCTGTTCACTGTCCCCTCTGTTG...TGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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3UTR-3UTR CCA 90 bp | GAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAAGTGGGTCAGTGGCTTaGGTTAGCAAGGACCTCAGG | + |
Preference number: 2 (lower is better) Translates to: EERLGHVLGGPVLFGKGKSGSVA*VSKDLR Trigger: CCTGAGGTCCTTGCTAACCCAAGCCACTGACCCACT...TTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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3UTR-3UTR CCA 90 bp | TCTGCGCTTACCCTTCCTCCTGGGACCGCCCACACAGCAAAGAAGCAATGGAAGCCCTACCTGCAAGGGTaGGCAGGAGAAATGAAGCAC | + |
Preference number: 2 (lower is better) Translates to: SALTLPPGTAHTAKKQWKPYLQG*AGEMKH Trigger: GTGCTTCATTTCTCCTGCCCACCCTTGCAGGTAGGG...CTTCCATTGCTTCTTTGCTGTGTGGGCGGTCCCAGGAGGAAGGGTAAGCGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR-3UTR TCA 90 bp | CCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTAACAAAAGTAATCCCTaGAGTCATGAAGAGTGGAGA | + |
Preference number: 2 (lower is better) Translates to: PSGCKAQAPQMDGSSLLLNKSNP*SHEEWR Trigger: TCTCCACTCTTCATGACTTCAGGGATTACTTTTGTT...AAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.10 ENSMUST00000147251.2 |
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3UTR-3UTR CCA 90 bp | AGACAGGGACATCTTTCCTGCCTCCTCGAGCCTTTATTCTACACCTGCTCTAGAGGGACACGTCCTGGGTaGTCCTGTCCTCTTTGGGAA | + |
Preference number: 2 (lower is better) Translates to: RQGHLSCLLEPLFYTCSRGTRPG*SCPLWE Trigger: TTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCC...TCTAGAGCAGGTGTAGAATAAAGGCTCGAGGAGGCAGGAAAGATGTCCCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR-3UTR CCA 90 bp | AGACAGGGACATCTTTCCTGCCTCCTCGAGCCTTTATTCTACACCTGCTCTAGAGGCATTTGTCTGATTTaGCGGGGAGGGGGTGAGTGG | + |
Preference number: 2 (lower is better) Translates to: RQGHLSCLLEPLFYTCSRGICLI*RGGGEW Trigger: CCACTCACCCCCTCCCCGCCAAATCAGACAAATGCC...TCTAGAGCAGGTGTAGAATAAAGGCTCGAGGAGGCAGGAAAGATGTCCCTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR CAA 90 bp | CTGGAATACATGCTCAGAGGAGAGGGGGACTCAAATGAACGGTGGTaGCAAAAACCCGAGGAGAGCAAATGGAGCGAGAGGAAGGATGGT | + |
Preference number: 2 (lower is better) Translates to: LEYMLRGEGDSNERW*QKPEESKWSERKDG Trigger: ACCATCCTTCCTCTCGCTCCATTTGCTCTCCTCGGGTTTTTGCAACCACCGTTCATTTGAGTCCCCCTCTCCTCTGAGCATGTATTCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR-3UTR TCA 90 bp | GCCTGCAATGGGCACATGAGACCCCCTGGGGACCAGACACAAACCCATCCCAACAACAAAAGTAATCCCTaGAGTCATGAAGAGTGGAGA | + |
Preference number: 2 (lower is better) Translates to: ACNGHMRPPGDQTQTHPNNKSNP*SHEEWR Trigger: TCTCCACTCTTCATGACTTCAGGGATTACTTTTGTT...GTTGGGATGGGTTTGTGTCTGGTCCCCAGGGGGTCTCATGTGCCCATTGCAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR-3UTR TCA 90 bp | GAAGAAGAGAGCCAATTCCAGGAAGGGGTTAAAAATAGAACATGTCTCAGAGGCTTTGGTGATGGCAAATaGGGGGCAGGCCCCCTAAGA | + |
Preference number: 2 (lower is better) Translates to: EEESQFQEGVKNRTCLRGFGDGK*GAGPLR Trigger: TCTTAGGGGGCCTGCCCCTCATTTGCCATCACCAAA...GCCTCTGAGACATGTTCTATTTTTAACCCCTTCCTGGAATTGGCTCTCTTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR GCA 72 bp | CCTGGCACCTGTGCTGGGGGCCCCTCAGGGCCACCATaGCAGCTCTGCGCTTACCCTTCCTCCTGGGACCGC | + |
Preference number: 3 (lower is better) Translates to: PGTCAGGPSGPP*QLCAYPSSWDR Trigger: GCGGTCCCAGGAGGAAGGGTAAGCGCAGAGCTGGCATGGTGGCCCTGAGGGGCCCCCAGCACAGGTGCCAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR GCA 72 bp | CCTCACCAACTGAGGCCTGTCTGTCCGTCTGTCCGGTaGAGCCTTGCAGGGGCTCCTGCCCCTGGTGCACGT | + |
Preference number: 3 (lower is better) Translates to: PHQLRPVCPSVR*SLAGAPAPGAR Trigger: ACGTGCACCAGGGGCAGGAGCCCCTGCAAGGCTGCACCGGACAGACGGACAGACAGGCCTCAGTTGGTGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR GCA 72 bp | ACTGAGGCCTGTCTGTCCGTCTGTCCGGTGCAGCCTTaGAGGGGCTCCTGCCCCTGGTGCACGTGGCTTTGT | + |
Preference number: 3 (lower is better) Translates to: TEACLSVCPVQP*RGSCPWCTWLC Trigger: ACAAAGCCACGTGCACCAGGGGCAGGAGCCCCTGCAAGGCTGCACCGGACAGACGGACAGACAGGCCTCAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR CCA 72 bp | AGTGAGGGGGAGGTGGGGGAGGGACTTGGCACTAGTTaGCCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATG | + |
Preference number: 3 (lower is better) Translates to: SEGEVGEGLGTS*PSGCKAQAPQM Trigger: CATCTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACTAGTGCCAAGTCCCTCCCCCACCTCCCCCTCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000090558.10 ENSMUST00000147251.2 |
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3UTR CCA 72 bp | CCTTCTGCCCCTGGCCGGACAGGGCTTGTCAGTTCCTaGGAGAGGTGGAACTGGCGGGTGGAAAGTGCCTTT | + |
Preference number: 3 (lower is better) Translates to: PSAPGRTGLVSS*ERWNWRVESAF Trigger: AAAGGCACTTTCCACCCGCCAGTTCCACCTCTCCCAGGAACTGACAAGCCCTGTCCGGCCAGGGGCAGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR CCA 72 bp | GGGCCACCATGCCAGCTCTGCGCTTACCCTTCCTCCTaGGACCGCCCACACAGCAAAGAAGCAATGGAAGAG | + |
Preference number: 3 (lower is better) Translates to: GPPCQLCAYPSS*DRPHSKEAMEE Trigger: CTCTTCCATTGCTTCTTTGCTGTGTGGGCGGTCCCAGGAGGAAGGGTAAGCGCAGAGCTGGCATGGTGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR-3UTR CAA 90 bp | ACTGAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGGTGGTCCTGTCCTCTTaGGGAAGGGGAAAGGGGAGT | + |
Preference number: 3 (lower is better) Translates to: TEERLGHVLGGPVLFGKGVVLSS*GRGKGS Trigger: ACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCAC...CCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090558.10 ENSMUST00000147251.2 |
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3UTR TCA 72 bp | TGGGACCGCCCACACAGCAAAGAAGCAATGGAAGAGTaGCTGGCCCTACCTGCAAGGGTGGGCAGGAGAAAT | + |
Preference number: 3 (lower is better) Translates to: WDRPHSKEAMEE*LALPARVGRRN Trigger: ATTTCTCCTGCCCACCCTTGCAGGTAGGGCCAGTCACTCTTCCATTGCTTCTTTGCTGTGTGGGCGGTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR CCA 72 bp | CTCTTCGCAGGGAGCTGGGGTCAAGTAGGGGGACAATaGGGACCAAGGACCTGGTTCTTTGAAGAAGAGAGC | + |
Preference number: 3 (lower is better) Translates to: LFAGSWGQVGGQ*GPRTWFFEEES Trigger: GCTCTCTTCTTCAAAGAACCAGGTCCTTGGTCCCCATTGTCCCCCTACTTGACCCCAGCTCCCTGCGAAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR-3UTR CAA 90 bp | TGCAAAAACCCGAGGAGAGCAAATGGAGCGAGAGGAAGGATGGTAGGCCCCAAAGTGGTCCTGTCCTCTTaGGGAAGGGGAAAGGGGAGT | + |
Preference number: 3 (lower is better) Translates to: CKNPRRANGARGRMVGPKVVLSS*GRGKGS Trigger: ACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCAC...TTTGGGGCCTACCATCCTTCCTCTCGCTCCATTTGCTCTCCTCGGGTTTTTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR-3UTR CAA 90 bp | GAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAACTGGTGCACGTGGCTTaGTCCTTTCCTTTTGGTGAT | + |
Preference number: 3 (lower is better) Translates to: EERLGHVLGGPVLFGKGKLVHVA*SFPFGD Trigger: ATCACCAAAAGGAAAGGACAAAGCCACGTGCACCAG...TTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR CCA 72 bp | ACCGCCCACACAGCAAAGAAGCAATGGAAGAGTGACTaGCCCTACCTGCAAGGGTGGGCAGGAGAAATGAAG | + |
Preference number: 3 (lower is better) Translates to: TAHTAKKQWKSD*PYLQGWAGEMK Trigger: CTTCATTTCTCCTGCCCACCCTTGCAGGTAGGGCCAGTCACTCTTCCATTGCTTCTTTGCTGTGTGGGCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR CCA 72 bp | AATGAACGGTGGTTGCAAAAACCCGAGGAGAGCAAATaGAGCGAGAGGAAGGATGGTAGGCCCCAAATCCAG | + |
Preference number: 3 (lower is better) Translates to: NERWLQKPEESK*SERKDGRPQIQ Trigger: CTGGATTTGGGGCCTACCATCCTTCCTCTCGCTCCATTTGCTCTCCTCGGGTTTTTGCAACCACCGTTCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR TCA 72 bp | TCTGGAATACATGCTCAGAGGAGAGGGGGACTCAAATaGACGGTGGTTGCAAAAACCCGAGGAGAGCAAATG | + |
Preference number: 3 (lower is better) Translates to: SGIHAQRRGGLK*TVVAKTRGEQM Trigger: CATTTGCTCTCCTCGGGTTTTTGCAACCACCGTTCATTTGAGTCCCCCTCTCCTCTGAGCATGTATTCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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3UTR-3UTR CAA 90 bp | AGACAGGGACATCTTTCCTGCCTCCTCGAGCCTTTATTCTACACCTGCTCTAGACTTTGTCCTTTCCTTTaGGTGATGGCAAATGAGGGG | + |
Preference number: 3 (lower is better) Translates to: RQGHLSCLLEPLFYTCSRLCPFL*VMANEG Trigger: CCCCTCATTTGCCATCACCAAAAGGAAAGGACAAAG...TCTAGAGCAGGTGTAGAATAAAGGCTCGAGGAGGCAGGAAAGATGTCCCTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.10 |
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CDS-3UTR GCA 90 bp | GCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGAGGCTGTCCCAGCCCTaGTCGCCAGGGAAGGCGGCC | + |
Preference number: 4 (lower is better) Translates to: APQMDGSSLLLRKAGRWARLSQP*SPGKAA Trigger: GGCCGCCTTCCCTGGCGAGCAGGGCTGGGACAGCCT...CGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR GCA 90 bp | CCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTTCTGGGTGCCTCCGCTaGCGCCGGGCCAGCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: PSGCKAQAPQMDGSSLLLSGCLR*RRASSS Trigger: GGAGGAGCTGGCCCGGCGGCAGCGGAGGCACCCAGA...AAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | CAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGCGTCGGATGCCGTGCTaGTTGGAGCGGAGGGCACGG | + |
Preference number: 4 (lower is better) Translates to: QAPQMDGSSLLLRKAGRWRRMPC*LERRAR Trigger: CCGTGCCCTCCGCTCCAACCAGCACGGCATCCGACG...CCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGCAGGGTCGGGACTaGGCTTCCGGCTGCAGGCGA | + |
Preference number: 4 (lower is better) Translates to: SSDGRFVAAASEGRQVGGRQGRD*ASGCRR Trigger: TCGCCTGCAGCCGGAAGCCCAGTCCCGACCCTGCCT...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTCGCTGGGCACTCTCATaGGCCAAGAGCCGTGTGGCC | + |
Preference number: 4 (lower is better) Translates to: SSDGRFVAAASEGRQVGGRWALS*AKSRVA Trigger: GGCCACACGGCTCTTGGCTCATGAGAGTGCCCAGCG...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | CCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTGGCCCAGGGCAGCTGTaGGGTTGCGTCGGATGCCGT | + |
Preference number: 4 (lower is better) Translates to: PSGCKAQAPQMDGSSLLLGPGQL*GCVGCR Trigger: ACGGCATCCGACGCAACCTCACAGCTGCCCTGGGCC...AAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | CCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGCGTCGCGCACCTCTGTaGGCGCGCGGTACAGGTGTA | + |
Preference number: 4 (lower is better) Translates to: PGSSDGRFVAAASEGRQVRRAPL*ARGTGV Trigger: TACACCTGTACCGCGCGCTCACAGAGGTGCGCGACG...CACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGG 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR GCA 90 bp | GGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCCGAGAAGACCCTGTaGCCTGCTCCAGGGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: GWDTSWVVLSSLGRGKGSPEKTL*PAPGAA Trigger: GGCTGCCCCTGGAGCAGGGCACAGGGTCTTCTCGGG...ACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | GTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCGGATGCCGTGCTGGTTaGAGCGGAGGGCACGGAGGA | + |
Preference number: 4 (lower is better) Translates to: VQGPGSSDGRFVAAASEGGCRAG*SGGHGG Trigger: TCCTCCGTGCCCTCCGCTCCAACCAGCACGGCATCC...GCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | CAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCCACTGCCTCTCCCTaGCTCAGTTCTGGGTGCCTC | + |
Preference number: 4 (lower is better) Translates to: QAPQMDGSSLLLRKAGRWATASP*LSSGCL Trigger: GAGGCACCCAGAACTGAGTCAGGGAGAGGCAGTGGC...CCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | ATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGAGCTCAGGGCAGCCAAGGTaGCTCCAAGGGCCACGTATG | + |
Preference number: 4 (lower is better) Translates to: MDGSSLLLRKAGRWAVGSSGQPR*LQGPRM Trigger: CATACGTGGCCCTTGGAGTCACCTTGGCTGCCCTGA...GCTCCCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR GCA 90 bp | GGGGAGGGACTTGGCACTAGTTGGCCTTCTGGGTGCAAGGCCCAGGCTCCTCAGGTACAGCCTCCCGTCTaGGTAGGGGCTGGGGCAGTT | + |
Preference number: 4 (lower is better) Translates to: GEGLGTSWPSGCKAQAPQVQPPV*VGAGAV Trigger: AACTGCCCCAGCCCCTACGCAGACGGGAGGCTGTAC...CTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACTAGTGCCAAGTCCCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR GCA 90 bp | TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGCTGGGCTGACTCTTaGCGGAGCGGCTGGCACTGT | + |
Preference number: 4 (lower is better) Translates to: SSDGRFVAAASEGRQVGGSWADS*RSGWHC Trigger: ACAGTGCCAGCCGCTCCGGCAAGAGTCAGCCCAGCT...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | TCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGCAGAGGTGTGCTGGGTaGCATTGCGCAGGAGCAGGG | + |
Preference number: 4 (lower is better) Translates to: SDGRFVAAASEGRQVGGRQRCAG*HCAGAG Trigger: CCCTGCTCCTGCGCAATGCCACCCAGCACACCTCTG...CCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR GCA 90 bp | GCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTGCCACCCTCTGTCTaGTGGATCAGTTCCCAGTGC | + |
Preference number: 4 (lower is better) Translates to: APQMDGSSLLLRKAGRWAVPPSV*WISSQC Trigger: GCACTGGGAACTGATCCAGCAGACAGAGGGTGGCAC...CGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGCTCCTCCGTCTCCTaGGCTTCACCAGGTCCTGCA | + |
Preference number: 4 (lower is better) Translates to: SSDGRFVAAASEGRQVGGSSSVS*ASPGPA Trigger: TGCAGGACCTGGTGAAGCCCAGGAGACGGAGGAGCT...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | GCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGTCCAGAAGACACAGATaGGCTTGGTCCGCTCCTCGG | + |
Preference number: 4 (lower is better) Translates to: APQMDGSSLLLRKAGRWASRRHR*AWSAPR Trigger: CCGAGGAGCGGACCAAGCCCATCTGTGTCTTCTGGA...CGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | ATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGAGCCACTGGCAGCTGACGTaGCTCTCGTTACGGAAGACG | + |
Preference number: 4 (lower is better) Translates to: MDGSSLLLRKAGRWAVGSHWQLT*LSLRKT Trigger: CGTCTTCCGTAACGAGAGCCACGTCAGCTGCCAGTG...GCTCCCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | ATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGAGCTTGAGGATGCCTTTGTaGGGTTGGGTAGAAGGGCCC | + |
Preference number: 4 (lower is better) Translates to: MDGSSLLLRKAGRWAVGSLRMPL*GWVEGP Trigger: GGGCCCTTCTACCCAACCTCACAAAGGCATCCTCAA...GCTCCCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | ACTGAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGCCACCGTGCCTGCCTTaGTGCTCATGGCGACAGGCA | + |
Preference number: 4 (lower is better) Translates to: TEERLGHVLGGPVLFGKGPPCLP*CSWRQA Trigger: TGCCTGTCGCCATGAGCATCAAGGCAGGCACGGTGG...CCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR GCA 90 bp | CAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGTTCTTCTCGAAGCCCTaGCGTTGGGCAGCACAGGAG | + |
Preference number: 4 (lower is better) Translates to: QAPQMDGSSLLLRKAGRWFFSKP*RWAAQE Trigger: CTCCTGTGCTGCCCAACGGCAGGGCTTCGAGAAGAA...CCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR GCA 90 bp | AGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGAAGACCCTGTGCCCTaGTCCAGGGGCAGCCTTAGG | + |
Preference number: 4 (lower is better) Translates to: REAGTRPGWSCPLWEGEREDPVP*SRGSLR Trigger: CCTAAGGCTGCCCCTGGAGCAGGGCACAGGGTCTTC...CCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR GCA 90 bp | TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTCTCATCCACCGTGCCTaGCTTGATGCTCATGGCGAC | + |
Preference number: 4 (lower is better) Translates to: SSDGRFVAAASEGRQVGGLIHRA*LDAHGD Trigger: GTCGCCATGAGCATCAAGGCAGGCACGGTGGATGAG...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | GGGGAGGGACTTGGCACTAGTTGGCCTTCTGGGTGCAAGGCCCAGGCTCCTCAGGCAGTTGAAGAGGTTTaGGGGGAGCCAACCCCTGTG | + |
Preference number: 4 (lower is better) Translates to: GEGLGTSWPSGCKAQAPQAVEEV*GEPTPV Trigger: CACAGGGGTTGGCTCCCCCCAAACCTCTTCAACTGC...CTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACTAGTGCCAAGTCCCTCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | TCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGCCACCCTCTGTCTGCTaGATCAGTTCCCAGTGCCTC | + |
Preference number: 4 (lower is better) Translates to: SDGRFVAAASEGRQVGGRPPSVC*ISSQCL Trigger: GAGGCACTGGGAACTGATCCAGCAGACAGAGGGTGG...CCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | CCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGTCTGGGCAAGGGCGCTaGCGTAAGCCTCATAGTGCT | + |
Preference number: 4 (lower is better) Translates to: PGSSDGRFVAAASEGRQVSGQGR*RKPHSA Trigger: AGCACTATGAGGCTTACGCCAGCGCCCTTGCCCAGA...CACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | AGGGACTTGGCACTAGTTGGCCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGGTGCCAGCAGCCACGTaGCACTCAGCAGCAGGAGGA | + |
Preference number: 4 (lower is better) Translates to: RDLALVGLLGARPRLLRWVPAAT*HSAAGG Trigger: TCCTCCTGCTGCTGAGTGCCACGTGGCTGCTGGCAC...CCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACTAGTGCCAAGTCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | TGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAATCTCCATTCTCCCGTaGCCGCTCTTCAAGGGGCCC | + |
Preference number: 4 (lower is better) Translates to: CKAQAPQMDGSSLLLRKAISILP*PLFKGP Trigger: GGGCCCCTTGAAGAGCGGCCACGGGAGAATGGAGAT...TGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | CCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTGCTGGTAGGCCACCTTaGCATCACTGCCGAAGTAGC | + |
Preference number: 4 (lower is better) Translates to: PSGCKAQAPQMDGSSLLLAGRPP*HHCRSS Trigger: GCTACTTCGGCAGTGATGTCAAGGTGGCCTACCAGC...AAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | AGAGTGGCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGGCCGGAACTGCACGGTaGCTGGCTTGTCCAGAGCCC | + |
Preference number: 4 (lower is better) Translates to: RVAEKADRGLAGATEGTVAGTAR*LACPEP Trigger: GGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGC...CACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGCCACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | CCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTGGAGGTCAGCCTGGTTaGTGCCCAGGAGAAAGACCA | + |
Preference number: 4 (lower is better) Translates to: PGWSCPLWEGERGVHFRRGGQPG*CPGERP Trigger: TGGTCTTTCTCCTGGGCATCAACCAGGCTGACCTCC...ACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | TGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTATAAAAGCAGCAGGAGGACCGTaGAGGAGGAGCGCAGGCCCG | + |
Preference number: 4 (lower is better) Translates to: WSCPLWEGERGVHFRRIKAAGGP*RRSAGP Trigger: CGGGCCTGCGCTCCTCCTTCACGGTCCTCCTGCTGC...TTTTATACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | AGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGTCCGGACCTCCTTGCTaGGCACCACGTAGGAGAGGA | + |
Preference number: 4 (lower is better) Translates to: REAGTRPGWSCPLWEGERSGPPC*APRRRG Trigger: TCCTCTCCTACGTGGTGCTCAGCAAGGAGGTCCGGA...CCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | GTGGCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACGCCGACTGCCCTCACTaGTGGAGGAGCCCCGAGAAG | + |
Preference number: 4 (lower is better) Translates to: VAEKADRGLAGATEGTVNADCPH*WRSPEK Trigger: CTTCTCGGGGCTCCTCCATCAGTGAGGGCAGTCGGC...GTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR GCA 90 bp | CCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTGTTGACAGAGAGCAGTaGCAGCAGCCACGTGGCACT | + |
Preference number: 4 (lower is better) Translates to: PGWSCPLWEGERGVHFRRVDREQ*QQPRGT Trigger: AGTGCCACGTGGCTGCTGGCACTGCTCTCTGTCAAC...ACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGTGTACATCCTGTGTaGCGGATAGCCCAAAGCCCC | + |
Preference number: 4 (lower is better) Translates to: SSDGRFVAAASEGRQVGGSVHPV*RIAQSP Trigger: GGGGCTTTGGGCTATCCGCCACACAGGATGTACACT...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | GCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGCATAACGGGGCAGCTTaGTCCCAGCAAAGTTCCCCT | + |
Preference number: 4 (lower is better) Translates to: ARPRLLRWTVRRCCFGRQHNGAA*SQQSSP Trigger: AGGGGAACTTTGCTGGGACCAAGCTGCCCCGTTATG...CTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | AGAGTGGCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGTCCCTGACTCAGTTCTaGGTGCCTCCGCTGCCGCCG | + |
Preference number: 4 (lower is better) Translates to: RVAEKADRGLAGATEGTVSLTQF*VPPLPP Trigger: CGGCGGCAGCGGAGGCACCCAGAACTGAGTCAGGGA...CACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGCCACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | ACTGAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGCGTCTGCGTAGGGGCTaGGGCAGTTATAGGACGAGG | + |
Preference number: 4 (lower is better) Translates to: TEERLGHVLGGPVLFGKGRLRRG*GSYRTR Trigger: CCTCGTCCTATAACTGCCCCAGCCCCTACGCAGACG...CCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | GGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTAGTTCCTCGTCGTCGTaGACGCTGATGCTCACCACA | + |
Preference number: 4 (lower is better) Translates to: GWDTSWVVLSSLGRGKGSSSSSS*TLMLTT Trigger: TGTGGTGAGCATCAGCGTTCACGACGACGAGGAACT...ACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | CCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTGGCTGCTCTTTTCGCTaGTGGTGGGCAGACACTTCT | + |
Preference number: 4 (lower is better) Translates to: PGWSCPLWEGERGVHFRRGCSFR*WWADTS Trigger: AGAAGTGTCTGCCCACCATCAGCGAAAAGAGCAGCC...ACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR GCA 90 bp | GCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACAGCTGTGCTGGGTGGCATTaGGCAGGAGCAGGGCTAGCC | + |
Preference number: 4 (lower is better) Translates to: AEKADRGLAGATEGTVNSCAGWH*AGAGLA Trigger: GGCTAGCCCTGCTCCTGCGCAATGCCACCCAGCACA...GCTGTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR GCA 90 bp | CAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGTGGATCAGTTCCCAGTaGCTCTTGTTGGCTGCATCC | + |
Preference number: 4 (lower is better) Translates to: QAPQMDGSSLLLRKAGRWWISSQ*LLLAAS Trigger: GGATGCAGCCAACAAGAGGCACTGGGAACTGATCCA...CCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | GCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACAGCGAGCCAAGAGCCGTGTaGCCAGCTGGTAGGCCACCT | + |
Preference number: 4 (lower is better) Translates to: AEKADRGLAGATEGTVNSEPRAV*PAGRPP Trigger: AGGTGGCCTACCAGCTGGCCACACGGCTCTTGGCTC...GCTGTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | GCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACAGCCCCAGTGCCTCTTGTTaGCTGCATCCAGGAGGGCGC | + |
Preference number: 4 (lower is better) Translates to: AEKADRGLAGATEGTVNSPSASC*LHPGGR Trigger: GCGCCCTCCTGGATGCAGCCAACAAGAGGCACTGGG...GCTGTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | ACTGAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAGAAGGGGATGTAGCTaGGCTGACTCTTGCCGGAGC | + |
Preference number: 4 (lower is better) Translates to: TEERLGHVLGGPVLFGKGRRGCS*ADSCRS Trigger: GCTCCGGCAAGAGTCAGCCCAGCTACATCCCCTTCT...CCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | GAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGCCAGGGTTCAGCGTaGACTCCTCCCTCAGCAAGA | + |
Preference number: 4 (lower is better) Translates to: EERLGHVLGGPVLFGKGKGQGSA*TPPSAR Trigger: TCTTGCTGAGGGAGGAGTCCACGCTGAACCCTGGCC...TTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | GCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACAGCGGTTGCACTGGCAGCTaGCGTGGCTCTCGTTACGGA | + |
Preference number: 4 (lower is better) Translates to: AEKADRGLAGATEGTVNSGCTGS*RGSRYG Trigger: TCCGTAACGAGAGCCACGTCAGCTGCCAGTGCAACC...GCTGTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | ATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGAGCGCAGACACTTCTTCTTaGGGATGCCTTTGTGAGGTT | + |
Preference number: 4 (lower is better) Translates to: MDGSSLLLRKAGRWAVGSADTSS*GCLCEV Trigger: AACCTCACAAAGGCATCCTCAAGAAGAAGTGTCTGC...GCTCCCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | CCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGCAAAGCTTGTCATATaGTTGCACTGGCAGCTGACG | + |
Preference number: 4 (lower is better) Translates to: PGSSDGRFVAAASEGRQVAKLVI*LHWQLT Trigger: CGTCAGCTGCCAGTGCAACCATATGACAAGCTTTGC...CACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | GTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTATAAAGGCTGCAGGCGAACTTaGGTGCTTTCCGGACCTCCT | + |
Preference number: 4 (lower is better) Translates to: VVLSSLGRGKGSPLPAYKGCRRT*VLSGPP Trigger: AGGAGGTCCGGAAAGCACTCAAGTTCGCCTGCAGCC...TTTATACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | GTGGCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACTCCTTGGGGGTACTGTaGAGGGGCAGTCTCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: VAEKADRGLAGATEGTVNSLGVL*RGSLSA Trigger: AGCTGAGAGACTGCCCCTTCACAGTACCCCCAAGGA...GTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | TGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAAACAGCAAAGGCCACTaGTCCAGCAAAGCTCCAGAT | + |
Preference number: 4 (lower is better) Translates to: CKAQAPQMDGSSLLLRKANSKGH*SSKAPD Trigger: ATCTGGAGCTTTGCTGGACCAGTGGCCTTTGCTGTT...TGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | GTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCCAGATTCTGGCAAAATaGCTGTGGTCTCAAGATCTG | + |
Preference number: 4 (lower is better) Translates to: VQGPGSSDGRFVAAASEGQILAK*LWSQDL Trigger: CAGATCTTGAGACCACAGTCATTTTGCCAGAATCTG...GCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | GCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACAGCGCAGAGTGTCACTGTTaGCAGAGAGCAGTGCCAGCA | + |
Preference number: 4 (lower is better) Translates to: AEKADRGLAGATEGTVNSAECHC*QRAVPA Trigger: TGCTGGCACTGCTCTCTGTCAACAGTGACACTCTGC...GCTGTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR GCA 90 bp | CCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTCAGAGGTACAGGAAATaGAGCAGGATAGCGATGACT | + |
Preference number: 4 (lower is better) Translates to: PGWSCPLWEGERGVHFRRQRYRK*SRIAMT Trigger: AGTCATCGCTATCCTGCTGCATTTCCTGTACCTCTG...ACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | GTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTATAAAAGACACAGATGGGCTTaGTCCGCTCCTCGGTCTCCA | + |
Preference number: 4 (lower is better) Translates to: VVLSSLGRGKGSPLPAYKRHRWA*SAPRSP Trigger: TGGAGACCGAGGAGCGGACCAAGCCCATCTGTGTCT...TTTATACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | GTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCTCTGAAGACAGATTCTaGCAAAATGACTGTGGTCTC | + |
Preference number: 4 (lower is better) Translates to: VQGPGSSDGRFVAAASEGSEDRF*QNDCGL Trigger: GAGACCACAGTCATTTTGCCAGAATCTGTCTTCAGA...GCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR TCA 90 bp | GTGGCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACGCCACTGACCAGGATTaGATGGTTCCAGAAGACACA | + |
Preference number: 4 (lower is better) Translates to: VAEKADRGLAGATEGTVNATDQD*MVPEDT Trigger: TGTGTCTTCTGGAACCATTCAATCCTGGTCAGTGGC...GTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR GCA 90 bp | CGAAGGAACACCGGCCCAGGGTTAATGCAGGAAGTTAAAGAAGAGAAATCTGGAGTGCCTCTTGTTGGCTaGATCCAGGAGGGCGCTGCC | + |
Preference number: 4 (lower is better) Translates to: RRNTGPGLMQEVKEEKSGVPLVG*IQEGAA Trigger: GGCAGCGCCCTCCTGGATGCAGCCAACAAGAGGCAC...TCCAGATTTCTCTTCTTTAACTTCCTGCATTAACCCTGGGCCGGTGTTCCTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR GCA 90 bp | TGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTATAAAAGATGACACTGGCCACTaGCTCTCCCTGACTCAGTTC | + |
Preference number: 4 (lower is better) Translates to: WSCPLWEGERGVHFRRIKDDTGH*LSLTQF Trigger: GAACTGAGTCAGGGAGAGGCAGTGGCCAGTGTCATC...TTTTATACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR GCA 90 bp | CGAAGGAACACCGGCCCAGGGTTAATGCAGGAAGTTAAAGAAGAGAAATCTGGATTGCGTCGGATGCCGTaGTGGTTGGAGCGGAGGGCA | + |
Preference number: 4 (lower is better) Translates to: RRNTGPGLMQEVKEEKSGLRRMP*WLERRA Trigger: TGCCCTCCGCTCCAACCAGCACGGCATCCGACGCAA...TCCAGATTTCTCTTCTTTAACTTCCTGCATTAACCCTGGGCCGGTGTTCCTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | AGGGACTTGGCACTAGTTGGCCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGCTGACCAGGATTGAATaGTTCCAGAAGACACAGATG | + |
Preference number: 4 (lower is better) Translates to: RDLALVGLLGARPRLLRWLTRIE*FQKTQM Trigger: CATCTGTGTCTTCTGGAACCATTCAATCCTGGTCAG...CCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACTAGTGCCAAGTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CCA 90 bp | CGAAGGAACACCGGCCCAGGGTTAATGCAGGAAGTTAAAGAAGAGAAATCTGGATGTCTGATGAGTGGGTaGAGGCATAGGAACCACTCT | + |
Preference number: 4 (lower is better) Translates to: RRNTGPGLMQEVKEEKSGCLMSG*RHRNHS Trigger: AGAGTGGTTCCTATGCCTCCACCCACTCATCAGACA...TCCAGATTTCTCTTCTTTAACTTCCTGCATTAACCCTGGGCCGGTGTTCCTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS GCA 90 bp | GCCCGAAGCTGCAGGGTGATGGTGCTGCGCCCCCTGGTGACGGCCTaGAGCAGGACGCCATCTGCCTGGCGTGTGCGGAACATGAGGCTG | + |
Preference number: 5 (lower is better) Translates to: ARSCRVMVLRPLVTA*SRTPSAWRVRNMRL Trigger: CAGCCTCATGTTCCGCACACGCCAGGCAGATGGCGTCCTGCTGCAGGCCGTCACCAGGGGGCGCAGCACCATCACCCTGCAGCTTCGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS-3UTR CAA 90 bp | GTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCCGGATGCCGTGCTGGTaGGAGCGGAGGGCACGGAGG | + |
Preference number: 5 (lower is better) Translates to: VQGPGSSDGRFVAAASEGRMPCW*ERRARR Trigger: CCTCCGTGCCCTCCGCTCCAACCAGCACGGCATCCG...GCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS TCA 90 bp | TGGGCTTGGTCCGCTCCTCGGTCTCCAGCAGCCGGAACTGCACGGTaGCTGGCTTGTCCAGAGCCCGCGGCAGGAGTTCCTCGTCGTCGT | + |
Preference number: 5 (lower is better) Translates to: WAWSAPRSPAAGTAR*LACPEPAAGVPRRR Trigger: ACGACGACGAGGAACTCCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGCTGCTGGAGACCGAGGAGCGGACCAAGCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 90 bp | GGGCAGCAGTCCAGCCAGGGTGTGGTAGATGATGACACTGGCCACTaGCTCTCCCTGACTCAGTTCTGGGTGCCTCCGCTGCCGCCGGGC | + |
Preference number: 5 (lower is better) Translates to: GQQSSQGVVDDDTGH*LSLTQFWVPPLPPG Trigger: GCCCGGCGGCAGCGGAGGCACCCAGAACTGAGTCAGGGAGAGGCAGTGGCCAGTGTCATCATCTACCACACCCTGGCTGGACTGCTGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CCA 90 bp | TCCTCTGAAGGCAGAAAGGGTGGCCCACCCCCGGGTCCTGGAGGCTaGCCCACCGACAGGCTTACGTTGAGGATATGGCCGCCTGGGGCA | + |
Preference number: 5 (lower is better) Translates to: SSEGRKGGPPPGPGG*PTDRLTLRIWPPGA Trigger: TGCCCCAGGCGGCCATATCCTCAACGTAAGCCTGTCGGTGGGCCAGCCTCCAGGACCCGGGGGTGGGCCACCCTTTCTGCCTTCAGAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | CTCATGGCGACAGGCATGACCCCATTCAGCTGTTCCTGCAGAGACTaGCGCGGAGGTGGGCGGGGAGGAGGTCCGTGCCGACTGCCCTCA | + |
Preference number: 5 (lower is better) Translates to: LMATGMTPFSCSCRD*RGGGRGGGPCRLPS Trigger: TGAGGGCAGTCGGCACGGACCTCCTCCCCGCCCACCTCCGCGCCAGTCTCTGCAGGAACAGCTGAATGGGGTCATGCCTGTCGCCATGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS-3UTR CAA 90 bp | TCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGCTCGAAGCCCTGCCGTaGGGCAGCACAGGAGGCTCG | + |
Preference number: 5 (lower is better) Translates to: SDGRFVAAASEGRQVGGRLEALP*GSTGGS Trigger: CGAGCCTCCTGTGCTGCCCAACGGCAGGGCTTCGAG...CCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS GCA 90 bp | TGGCTCGGCCTGGCTCAAGACGCAGAGATGACGCCTGGAGCCCTGTaGCCTCCACACTTAGCACTACGTGGCCTGCCCGAAGCTGCAGGG | + |
Preference number: 5 (lower is better) Translates to: WLGLAQDAEMTPGAL*PPHLALRGLPEAAG Trigger: CCCTGCAGCTTCGGGCAGGCCACGTAGTGCTAAGTGTGGAGGGCACAGGGCTCCAGGCGTCATCTCTGCGTCTTGAGCCAGGCCGAGCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 90 bp | ACACAGATGGGCTTGGTCCGCTCCTCGGTCTCCAGCAGCCGGAACTaGACGGTGACTGGCTTGTCCAGAGCCCGCGGCAGGAGTTCCTCG | + |
Preference number: 5 (lower is better) Translates to: TQMGLVRSSVSSSRN*TVTGLSRARGRSSS Trigger: CGAGGAACTCCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGCTGCTGGAGACCGAGGAGCGGACCAAGCCCATCTGTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 90 bp | AAGGAGGAGCGCAGGCCCGAGACAGGCCCTTTCTTCTCGAAGCCCTaGCGTTGGGCAGCACAGGAGGCTCGGGCCGACAGGATGTACAGG | + |
Preference number: 5 (lower is better) Translates to: KEERRPETGPFFSKP*RWAAQEARADRMYR Trigger: CCTGTACATCCTGTCGGCCCGAGCCTCCTGTGCTGCCCAACGGCAGGGCTTCGAGAAGAAAGGGCCTGTCTCGGGCCTGCGCTCCTCCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 90 bp | GCCTTGATGCTCATGGCGACAGGCATGACCCCATTCAGCTGTTCCTaGAGAGACTGGCGCGGAGGTGGGCGGGGAGGAGGTCCGTGCCGA | + |
Preference number: 5 (lower is better) Translates to: ALMLMATGMTPFSCS*RDWRGGGRGGGPCR Trigger: TCGGCACGGACCTCCTCCCCGCCCACCTCCGCGCCAGTCTCTGCAGGAACAGCTGAATGGGGTCATGCCTGTCGCCATGAGCATCAAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CCA 90 bp | CCAGAGGTGTGCTGGGTGGCATTGCGCAGGAGCAGGGCTAGCCTCTaGGAGCGTCCTGAGTCCAGGCCTGATTCGTTCCTCTGCAGCCGC | + |
Preference number: 5 (lower is better) Translates to: PEVCWVALRRSRASL*ERPESRPDSFLCSR Trigger: GCGGCTGCAGAGGAACGAATCAGGCCTGGACTCAGGACGCTCCCAGAGGCTAGCCCTGCTCCTGCGCAATGCCACCCAGCACACCTCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CCA 90 bp | CTTGGTCCGCTCCTCGGTCTCCAGCAGCCGGAACTGCACGGTGACTaGCTTGTCCAGAGCCCGCGGCAGGAGTTCCTCGTCGTCGTGAAC | + |
Preference number: 5 (lower is better) Translates to: LGPLLGLQQPELHGD*LVQSPRQEFLVVVN Trigger: GTTCACGACGACGAGGAACTCCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGCTGCTGGAGACCGAGGAGCGGACCAAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CCA 90 bp | AGGCATGACCCCATTCAGCTGTTCCTGCAGAGACTGGCGCGGAGGTaGGCGGGGAGGAGGTCCGTGCCGACTGCCCTCACTGATGGAGGA | + |
Preference number: 5 (lower is better) Translates to: RHDPIQLFLQRLARR*AGRRSVPTALTDGG Trigger: TCCTCCATCAGTGAGGGCAGTCGGCACGGACCTCCTCCCCGCCCACCTCCGCGCCAGTCTCTGCAGGAACAGCTGAATGGGGTCATGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CCA 90 bp | GACACCCTGCAAACAGCCCCGGAAGCCACGGGCCACTCCGCTGGCTaGCCCAGGAACTCCCCCGACTGTAATATTGCTCAGGTGCAGTCC | + |
Preference number: 5 (lower is better) Translates to: DTLQTAPEATGHSAG*PRNSPDCNIAQVQS Trigger: GGACTGCACCTGAGCAATATTACAGTCGGGGGAGTTCCTGGGCCAGCCAGCGGAGTGGCCCGTGGCTTCCGGGGCTGTTTGCAGGGTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | GAGCGCAGGCCCGAGACAGGCCCTTTCTTCTCGAAGCCCTGCCGTTaGGCAGCACAGGAGGCTCGGGCCGACAGGATGTACAGGAAGACA | + |
Preference number: 5 (lower is better) Translates to: ERRPETGPFFSKPCR*AAQEARADRMYRKT Trigger: TGTCTTCCTGTACATCCTGTCGGCCCGAGCCTCCTGTGCTGCCCAACGGCAGGGCTTCGAGAAGAAAGGGCCTGTCTCGGGCCTGCGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS-3UTR CAA 90 bp | GCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGAAGACACAGATGGGCTaGGTCCGCTCCTCGGTCTCC | + |
Preference number: 5 (lower is better) Translates to: APQMDGSSLLLRKAGRWAKTQMG*VRSSVS Trigger: GGAGACCGAGGAGCGGACCAAGCCCATCTGTGTCTT...CGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CAA 90 bp | GATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGAGGGGAGGTCAGCCTGGTaGATGCCCAGGAGAAAGACC | + |
Preference number: 5 (lower is better) Translates to: DGRFVAAASEGRQVGGREGRSAW*MPRRKT Trigger: GGTCTTTCTCCTGGGCATCAACCAGGCTGACCTCCC...CTCCCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS TCA 90 bp | GTGACTGGCTTGTCCAGAGCCCGCGGCAGGAGTTCCTCGTCGTCGTaGACGCTGATGCTCACCACAGGGGTGTTGATGACGGGGCGCTTG | + |
Preference number: 5 (lower is better) Translates to: VTGLSRARGRSSSSS*TLMLTTGVLMTGRL Trigger: CAAGCGCCCCGTCATCAACACCCCTGTGGTGAGCATCAGCGTTCACGACGACGAGGAACTCCTGCCGCGGGCTCTGGACAAGCCAGTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 90 bp | CCCCACCCAGCAACAAGGGCCCTGTCAGGTCCAGAGACTTCTTGCTaGCTCCTTGGGTGCCCTGGGCAGCACAGGAGTAGTTGCCCAGCA | + |
Preference number: 5 (lower is better) Translates to: PHPATRALSGPETSC*LLGCPGQHRSSCPA Trigger: TGCTGGGCAACTACTCCTGTGCTGCCCAGGGCACCCAAGGAGGCAGCAAGAAGTCTCTGGACCTGACAGGGCCCTTGTTGCTGGGTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 90 bp | ATGTGCCGGCTATCCACCTGGAGGTCCTTCATGCAGCCCACAAAGTaGCGCATTCGGACGGGGAAGCTCTCGGGCAGATCCGGCACCCCA | + |
Preference number: 5 (lower is better) Translates to: MCRLSTWRSFMQPTK*RIRTGKLSGRSGTP Trigger: TGGGGTGCCGGATCTGCCCGAGAGCTTCCCCGTCCGAATGCGGCACTTTGTGGGCTGCATGAAGGACCTCCAGGTGGATAGCCGGCACAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 90 bp | GTCAAAGGACAGAATGGCATGGCCAGGGCCCCCGCTGGCTCCCAGTaGCAGCTGTGCATGATGCCAGTCACCATCATTGGCTCGGCCTGG | + |
Preference number: 5 (lower is better) Translates to: VKGQNGMARAPAGSQ*QLCMMPVTIIGSAW Trigger: CCAGGCCGAGCCAATGATGGTGACTGGCATCATGCACAGCTGGCACTGGGAGCCAGCGGGGGCCCTGGCCATGCCATTCTGTCCTTTGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 90 bp | TCTAGACTGCTGATACCCTCAGGTGTCTCGCTTACCCTGACACCCTaGAAACAGCCCCGGAAGCCACGGGCCACTCCGCTGGCTGGCCCA | + |
Preference number: 5 (lower is better) Translates to: SRLLIPSGVSLTLTP*KQPRKPRATPLAGP Trigger: TGGGCCAGCCAGCGGAGTGGCCCGTGGCTTCCGGGGCTGTTTGCAGGGTGTCAGGGTAAGCGAGACACCTGAGGGTATCAGCAGTCTAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | AGCCCGTTACGCTCCTTGGTAGCAAACGAGAGGGCCAGGGTGAAGTaGAAGCGCTGGCGCAGGCCACGGAAGGTGATGAAGGAGCGGGCA | + |
Preference number: 5 (lower is better) Translates to: SPLRSLVANERARVK*KRWRRPRKVMKERA Trigger: TGCCCGCTCCTTCATCACCTTCCGTGGCCTGCGCCAGCGCTTCCACTTCACCCTGGCCCTCTCGTTTGCTACCAAGGAGCGTAACGGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | CGCTGGCTCCCAGTGCCAGCTGTGCATGATGCCAGTCACCATCATTaGCTCGGCCTGGCTCAAGACGCAGAGATGACGCCTGGAGCCCTG | + |
Preference number: 5 (lower is better) Translates to: RWLPVPAVHDASHHH*LGLAQDAEMTPGAL Trigger: CAGGGCTCCAGGCGTCATCTCTGCGTCTTGAGCCAGGCCGAGCCAATGATGGTGACTGGCATCATGCACAGCTGGCACTGGGAGCCAGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | CAGGTAGCCCGAACCGCGTGCGGGGCCACCAGATCCCAGCCTCTATaGCCCGTGGGCAGCTGTCGTAATTCACTTCACAGCCATTGGTGG | + |
Preference number: 5 (lower is better) Translates to: QVARTACGATRSQPL*PVGSCRNSLHSHWW Trigger: CCACCAATGGCTGTGAAGTGAATTACGACAGCTGCCCACGGGCCATAGAGGCTGGGATCTGGTGGCCCCGCACGCGGTTCGGGCTACCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS-3UTR CAA 90 bp | ACTGAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAGGGCAGCTGTGAGGTaGCGTCGGATGCCGTGCTGG | + |
Preference number: 5 (lower is better) Translates to: TEERLGHVLGGPVLFGKGRAAVR*RRMPCW Trigger: CCAGCACGGCATCCGACGCAACCTCACAGCTGCCCT...CCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CAA 90 bp | CCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGCTGCAGGCGAACTaGAGTGCTTTCCGGACCTCC | + |
Preference number: 5 (lower is better) Translates to: PSGCKAQAPQMDGSSLLLRLQAN*SAFRTS Trigger: GGAGGTCCGGAAAGCACTCAAGTTCGCCTGCAGCCG...AAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS GCA 90 bp | GGTAAGCGTGGCCAAGGCACTCCGTCGGGGCATACCGTGATCCTGTaGAGTGACCCTGAAGACGTGGGTGCTCTTGGTCTCCCGATCCAG | + |
Preference number: 5 (lower is better) Translates to: GKRGQGTPSGHTVIL*SDPEDVGALGLPIQ Trigger: CTGGATCGGGAGACCAAGAGCACCCACGTCTTCAGGGTCACTGCACAGGATCACGGTATGCCCCGACGGAGTGCCTTGGCCACGCTTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 90 bp | AGTCGGCCATGTCGATGTGCCGGCTATCCACCTGGAGGTCCTTCATaGAGCCCACAAAGTGCCGCATTCGGACGGGGAAGCTCTCGGGCA | + |
Preference number: 5 (lower is better) Translates to: SRPCRCAGYPPGGPS*SPQSAAFGRGSSRA Trigger: TGCCCGAGAGCTTCCCCGTCCGAATGCGGCACTTTGTGGGCTGCATGAAGGACCTCCAGGTGGATAGCCGGCACATCGACATGGCCGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 90 bp | CAAGGGCGCTGGCGTAAGCCTCATAGTGCTGGAGCAGCCAGGCGGTaGCACCCTCTGTCTGCTGGATCAGTTCCCAGTGCCTCTTGTTGG | + |
Preference number: 5 (lower is better) Translates to: QGRWRKPHSAGAARR*HPLSAGSVPSASCW Trigger: CCAACAAGAGGCACTGGGAACTGATCCAGCAGACAGAGGGTGGCACCGCCTGGCTGCTCCAGCACTATGAGGCTTACGCCAGCGCCCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 90 bp | TGGACTCCTCCCTCAGCAAGAAGGGGATGTAGCTGGGCTGACTCTTaGCGGAGCGGCTGGCACTGTGCAACGAGCCAGCCGAATCTCCGT | + |
Preference number: 5 (lower is better) Translates to: WTPPSARRGCSWADS*RSGWHCATSQPNLR Trigger: ACGGAGATTCGGCTGGCTCGTTGCACAGTGCCAGCCGCTCCGGCAAGAGTCAGCCCAGCTACATCCCCTTCTTGCTGAGGGAGGAGTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CCA 90 bp | GGCATTGCTGCCCTTGTCTCTATCGGAGGCGGTGACTCGGAGAACTaGGGCTCCTGGGGTCACATCCTCCCGCACCTGGACCACATAACG | + |
Preference number: 5 (lower is better) Translates to: GIAALVSIGGGDSEN*GSWGHILPHLDHIT Trigger: CGTTATGTGGTCCAGGTGCGGGAGGATGTGACCCCAGGAGCCCCAGTTCTCCGAGTCACCGCCTCCGATAGAGACAAGGGCAGCAATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | CACATCCAGGACAGTAACTGTCACTTCCATGGGTGTGCGGGCTGGTaGCATGCCCTTGTCCACCGCATAGGCCCGCAGGACGTACTGGGC | + |
Preference number: 5 (lower is better) Translates to: HIQDSNCHFHGCAGW*HALVHRIGPQDVLG Trigger: GCCCAGTACGTCCTGCGGGCCTATGCGGTGGACAAGGGCATGCCACCAGCCCGCACACCCATGGAAGTGACAGTTACTGTCCTGGATGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | TCACCATCATTGGCTCGGCCTGGCTCAAGACGCAGAGATGACGCCTaGAGCCCTGTGCCCTCCACACTTAGCACTACGTGGCCTGCCCGA | + |
Preference number: 5 (lower is better) Translates to: SPSLARPGSRRRDDA*SPVPSTLSTTWPAR Trigger: TCGGGCAGGCCACGTAGTGCTAAGTGTGGAGGGCACAGGGCTCCAGGCGTCATCTCTGCGTCTTGAGCCAGGCCGAGCCAATGATGGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS-3UTR CAA 90 bp | GCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGATGCCTTTGTGAGGTaGGGTAGAAGGGCCCGGAAG | + |
Preference number: 5 (lower is better) Translates to: ARPRLLRWTVRRCCFGRQDAFVR*GRRARK Trigger: CTTCCGGGCCCTTCTACCCAACCTCACAAAGGCATC...CTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS TCA 90 bp | TGTAGTGCACTAGGGCATTGCTGCCCTTGTCTCTATCGGAGGCGGTaGCTCGGAGAACTGGGGCTCCTGGGGTCACATCCTCCCGCACCT | + |
Preference number: 5 (lower is better) Translates to: CSALGHCCPCLYRRR*LGELGLLGSHPPAP Trigger: AGGTGCGGGAGGATGTGACCCCAGGAGCCCCAGTTCTCCGAGTCACCGCCTCCGATAGAGACAAGGGCAGCAATGCCCTAGTGCACTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 90 bp | GCCGTGGGGCCTTTAAGCAAGGGTGCTCTTCAGGCAGGGTCAGCGTaGCTTGTGGAGAAAGGTGTCCTCCGATACCCAGGAGACGACAGC | + |
Preference number: 5 (lower is better) Translates to: AVGPLSKGALQAGSA*LVEKGVLRYPGDDS Trigger: GCTGTCGTCTCCTGGGTATCGGAGGACACCTTTCTCCACAAGGCACGCTGACCCTGCCTGAAGAGCACCCTTGCTTAAAGGCCCCACGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 90 bp | CCGTGTAGCCATCCAGACAGAGGCAGGTATAGCCACCCTCTCGGCTaGGGCAGCGCCCATGGGGTCCACAAGGTCTTGAGTAACAGAGGT | + |
Preference number: 5 (lower is better) Translates to: PCSHPDRGRYSHPLG*GSAHGVHKVLSNRG Trigger: ACCTCTGTTACTCAAGACCTTGTGGACCCCATGGGCGCTGCCGCAGCCGAGAGGGTGGCTATACCTGCCTCTGTCTGGATGGCTACACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 90 bp | CAAGGCAGGGTCGGGACTGGGCTTCCGGCTGCAGGCGAACTTGAGTaGTTTCCGGACCTCCTTGCTGAGCACCACGTAGGAGAGGAAGAT | + |
Preference number: 5 (lower is better) Translates to: QGRVGTGLPAAGELE*FPDLLAEHHVGEED Trigger: ATCTTCCTCTCCTACGTGGTGCTCAGCAAGGAGGTCCGGAAAGCACTCAAGTTCGCCTGCAGCCGGAAGCCCAGTCCCGACCCTGCCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CCA 90 bp | TTGCCCAGCACGGGCGGGTTATCATTGCGGTCAAGGAGGCGGACATaGACAGTAGCCCTGCTCACCAAGGGAGCAGACGTAGCCTGGATG | + |
Preference number: 5 (lower is better) Translates to: LPSTGGLSLRSRRRT*TVALLTKGADVAWM Trigger: CATCCAGGCTACGTCTGCTCCCTTGGTGAGCAGGGCTACTGTCCATGTCCGCCTCCTTGACCGCAATGATAACCCGCCCGTGCTGGGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | CCGGGTCCTGGAGGCTGGCCCACCGACAGGCTTACGTTGAGGATATaGCCGCCTGGGGCATCAGTATCCCTTTGCACATTGAAGACCACC | + |
Preference number: 5 (lower is better) Translates to: PGPGGWPTDRLTLRI*PPGASVSLCTLKTT Trigger: GGTGGTCTTCAATGTGCAAAGGGATACTGATGCCCCAGGCGGCCATATCCTCAACGTAAGCCTGTCGGTGGGCCAGCCTCCAGGACCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS-3UTR CAA 90 bp | GATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGAGAAGCTTGTCATATGGTaGCACTGGCAGCTGACGTGG | + |
Preference number: 5 (lower is better) Translates to: DGRFVAAASEGRQVGGREKLVIW*HWQLTW Trigger: CCACGTCAGCTGCCAGTGCAACCATATGACAAGCTT...CTCCCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS TCA 90 bp | ACCAAGATGGTAAGCGTGGCCAAGGCACTCCGTCGGGGCATACCGTaGTCCTGTGCAGTGACCCTGAAGACGTGGGTGCTCTTGGTCTCC | + |
Preference number: 5 (lower is better) Translates to: TKMVSVAKALRRGIP*SCAVTLKTWVLLVS Trigger: GGAGACCAAGAGCACCCACGTCTTCAGGGTCACTGCACAGGATCACGGTATGCCCCGACGGAGTGCCTTGGCCACGCTTACCATCTTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | CGGAAGGTGATGAAGGAGCGGGCAGGGAAGCTGCGTGTGGTCACCTaGCAGAAGGGTTTCTCAAAGTCCCCGGAGGGGCAGTCACATTTG | + |
Preference number: 5 (lower is better) Translates to: RKVMKERAGKLRVVT*QKGFSKSPEGQSHL Trigger: CAAATGTGACTGCCCCTCCGGGGACTTTGAGAAACCCTTCTGCCAGGTGACCACACGCAGCTTCCCTGCCCGCTCCTTCATCACCTTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | GTTGCCCATAGTCAAAGGACAGAATGGCATGGCCAGGGCCCCCGCTaGCTCCCAGTGCCAGCTGTGCATGATGCCAGTCACCATCATTGG | + |
Preference number: 5 (lower is better) Translates to: VAHSQRTEWHGQGPR*LPVPAVHDASHHHW Trigger: CCAATGATGGTGACTGGCATCATGCACAGCTGGCACTGGGAGCCAGCGGGGGCCCTGGCCATGCCATTCTGTCCTTTGACTATGGGCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | GCTGCAGTAGCTGTTGGTAGGGCATGGATTCGAGTCACAGGGATCTaGCCAGCTACAGCCTGGCTCCACATTGATGCTCTCCCCGCGGCT | + |
Preference number: 5 (lower is better) Translates to: AAVAVGRAWIRVTGI*PATAWLHIDALPAA Trigger: AGCCGCGGGGAGAGCATCAATGTGGAGCCAGGCTGTAGCTGGCCAGATCCCTGTGACTCGAATCCATGCCCTACCAACAGCTACTGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | TCAGCAAGAAGGGGATGTAGCTGGGCTGACTCTTGCCGGAGCGGCTaGCACTGTGCAACGAGCCAGCCGAATCTCCGTAAGGCTGGTACA | + |
Preference number: 5 (lower is better) Translates to: SARRGCSWADSCRSG*HCATSQPNLRKAGT Trigger: TGTACCAGCCTTACGGAGATTCGGCTGGCTCGTTGCACAGTGCCAGCCGCTCCGGCAAGAGTCAGCCCAGCTACATCCCCTTCTTGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS-3UTR CAA 90 bp | TGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTATAAAATGCACGGTGACTGGCTaGTCCAGAGCCCGCGGCAGG | + |
Preference number: 5 (lower is better) Translates to: WSCPLWEGERGVHFRRIKCTVTG*SRARGR Trigger: CCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCA...TTTTATACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CAA 90 bp | GCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGATCATGTTGTTGGGCTaGGCCTTCCAAGAACAGGCC | + |
Preference number: 5 (lower is better) Translates to: ARPRLLRWTVRRCCFGRQIMLLG*AFQEQA Trigger: GGCCTGTTCTTGGAAGGCCAAGCCCAACAACATGAT...CTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS TCA 90 bp | CCACATGATCCGGGGGTGTGGCCAACGTGGCTGCCACGGCCTGAATaGAGAGTCCCAGCAGTGGTGAGAGAAAGCGTTCTGGAGACATGT | + |
Preference number: 5 (lower is better) Translates to: PHDPGVWPTWLPRPE*RVPAVVRESVLETC Trigger: ACATGTCTCCAGAACGCTTTCTCTCACCACTGCTGGGACTCTTCATTCAGGCCGTGGCAGCCACGTTGGCCACACCCCCGGATCATGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 90 bp | CGATCTTCTTGGTGGGGCAGCCAGGCACAGTGCCATTGTTGGCAATaGAGTCGGCCATGTCGATGTGCCGGCTATCCACCTGGAGGTCCT | + |
Preference number: 5 (lower is better) Translates to: RSSWWGSQAQCHCWQ*SRPCRCAGYPPGGP Trigger: AGGACCTCCAGGTGGATAGCCGGCACATCGACATGGCCGACTTCATTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGATCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | GAGGACGGCCACCGTCCTGAGCCCGGATCCGAAGCGTATACTCTTTaGTTGTCTCATAGTCGAGTGGGCTTACCACATCCAGGGCTCCAG | + |
Preference number: 5 (lower is better) Translates to: EDGHRPEPGSEAYTL*LSHSRVGLPHPGLQ Trigger: CTGGAGCCCTGGATGTGGTAAGCCCACTCGACTATGAGACAACCAAAGAGTATACGCTTCGGATCCGGGCTCAGGACGGTGGCCGTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | ATTCACATCCAGGACAGTAACTGTCACTTCCATGGGTGTGCGGGCTaGTGGCATGCCCTTGTCCACCGCATAGGCCCGCAGGACGTACTG | + |
Preference number: 5 (lower is better) Translates to: IHIQDSNCHFHGCAG*WHALVHRIGPQDVL Trigger: CAGTACGTCCTGCGGGCCTATGCGGTGGACAAGGGCATGCCACCAGCCCGCACACCCATGGAAGTGACAGTTACTGTCCTGGATGTGAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 90 bp | GGCCAACGTGGCTGCCACGGCCTGAATGAAGAGTCCCAGCAGTGGTaGGAGAAAGCGTTCTGGAGACATGTCTTCCAAGCGCAGCGTGAT | + |
Preference number: 5 (lower is better) Translates to: GQRGCHGLNEESQQW*EKAFWRHVFQAQRD Trigger: ATCACGCTGCGCTTGGAAGACATGTCTCCAGAACGCTTTCTCTCACCACTGCTGGGACTCTTCATTCAGGCCGTGGCAGCCACGTTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 90 bp | AGCTTGCAAGACTGGCATCTGAGCCGTGGGGCCTTTAAGCAAGGGTaGTCTTCAGGCAGGGTCAGCGTGCCTTGTGGAGAAAGGTGTCCT | + |
Preference number: 5 (lower is better) Translates to: SLQDWHLSRGAFKQG*SSGRVSVPCGERCP Trigger: AGGACACCTTTCTCCACAAGGCACGCTGACCCTGCCTGAAGAGCACCCTTGCTTAAAGGCCCCACGGCTCAGATGCCAGTCTTGCAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 90 bp | GCCTGTGCCATTGTTAATGGTGAAGGGAAAGTCGTGCCCAACCCCTaGCAGGCTATACTCGAGGCGGGCGTTATCACCAGCGTCAGCATC | + |
Preference number: 5 (lower is better) Translates to: ACAIVNGEGKVVPNP*QAILEAGVITSVSI Trigger: GATGCTGACGCTGGTGATAACGCCCGCCTCGAGTATAGCCTGGCAGGGGTTGGGCACGACTTTCCCTTCACCATTAACAATGGCACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | CAGAGGTACCAGCAGGCTGGTTCTCAGGCACTGTGGCCTGGTAGCTaGGAGGCTGGAACTGGGGAGCTGTATTCACATTCCTTTTCCTGC | + |
Preference number: 5 (lower is better) Translates to: QRYQQAGSQALWPGS*EAGTGELYSHSFSC Trigger: GCAGGAAAAGGAATGTGAATACAGCTCCCCAGTTCCAGCCTCCCAGCTACCAGGCCACAGTGCCTGAGAACCAGCCTGCTGGTACCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | TCGCAGCTGAACGCATTCCACTGGTTCACACAGGTGCCACCGTTGTaGCAAATGCTGCTGTCGCACACGATCTTCTTGGTGGGGCAGCCA | + |
Preference number: 5 (lower is better) Translates to: SQLNAFHWFTQVPPL*QMLLSHTIFLVGQP Trigger: TGGCTGCCCCACCAAGAAGATCGTGTGCGACAGCAGCATTTGCCACAACGGTGGCACCTGTGTGAACCAGTGGAATGCGTTCAGCTGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS-3UTR CAA 90 bp | CAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGACAGAGATGACAATGTaGGGTGTGACGATGGTGAAG | + |
Preference number: 5 (lower is better) Translates to: QAPQMDGSSLLLRKAGRWTEMTM*GVTMVK Trigger: CTTCACCATCGTCACACCCAACATTGTCATCTCTGT...CCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS-3UTR CAA 90 bp | TGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTATAAAATCCACCGTGCCTGCCTaGATGCTCATGGCGACAGGC | + |
Preference number: 5 (lower is better) Translates to: WSCPLWEGERGVHFRRIKSTVPA*MLMATG Trigger: GCCTGTCGCCATGAGCATCAAGGCAGGCACGGTGGA...TTTTATACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS TCA 90 bp | TTTTCGCTGATGGTGGGCAGACACTTCTTCTTGAGGATGCCTTTGTaGGGTTGGGTAGAAGGGCCCGGAAGGGGTCCCAGAGACCCTTCC | + |
Preference number: 5 (lower is better) Translates to: FSLMVGRHFFLRMPL*GWVEGPGRGPRDPS Trigger: GGAAGGGTCTCTGGGACCCCTTCCGGGCCCTTCTACCCAACCTCACAAAGGCATCCTCAAGAAGAAGTGTCTGCCCACCATCAGCGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 90 bp | ATTGCTCAGGTGCAGTCCATGCAGCCGAGGGCCCAGATTACCCTCTaGCTTCTGTTGCCCATAGTCAAAGGACAGAATGGCATGGCCAGG | + |
Preference number: 5 (lower is better) Translates to: IAQVQSMQPRAQITL*LLLPIVKGQNGMAR Trigger: CCTGGCCATGCCATTCTGTCCTTTGACTATGGGCAACAGAAGGCAGAGGGTAATCTGGGCCCTCGGCTGCATGGACTGCACCTGAGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | TGGAGGCTGGCCCACCGACAGGCTTACGTTGAGGATATGGCCGCCTaGGGCATCAGTATCCCTTTGCACATTGAAGACCACCACATGATC | + |
Preference number: 5 (lower is better) Translates to: WRLAHRQAYVEDMAA*GISIPLHIEDHHMI Trigger: GATCATGTGGTGGTCTTCAATGTGCAAAGGGATACTGATGCCCCAGGCGGCCATATCCTCAACGTAAGCCTGTCGGTGGGCCAGCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS-3UTR CAA 90 bp | GCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGTACCACTATTCTCCTTaGTTGTGGTCCCAAAGTCTC | + |
Preference number: 5 (lower is better) Translates to: ARPRLLRWTVRRCCFGRQYHYSP*LWSQSL Trigger: GAGACTTTGGGACCACAACAAAGGAGAATAGTGGTA...CTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS GCA 90 bp | ACAGAGATCCAGCCTGTGCCATTGTTAATGGTGAAGGGAAAGTCGTaGCCAACCCCTGCCAGGCTATACTCGAGGCGGGCGTTATCACCA | + |
Preference number: 5 (lower is better) Translates to: TEIQPVPLLMVKGKS*PTPARLYSRRALSP Trigger: TGGTGATAACGCCCGCCTCGAGTATAGCCTGGCAGGGGTTGGGCACGACTTTCCCTTCACCATTAACAATGGCACAGGCTGGATCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | TTAAGGATGCAACAGAGGTACCAGCAGGCTGGTTCTCAGGCACTGTaGCCTGGTAGCTGGGAGGCTGGAACTGGGGAGCTGTATTCACAT | + |
Preference number: 5 (lower is better) Translates to: LRMQQRYQQAGSQAL*PGSWEAGTGELYSH Trigger: ATGTGAATACAGCTCCCCAGTTCCAGCCTCCCAGCTACCAGGCCACAGTGCCTGAGAACCAGCCTGCTGGTACCTCTGTTGCATCCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | GGTCTCCCGATCCAGCTCCTCAGCTGTGGTGACAACACCGGTGATTaGGTCCAAGGAGAAGAAATGATTGGAGCGGCTATCAAAGAGGGC | + |
Preference number: 5 (lower is better) Translates to: GLPIQLLSCGDNTGD*VQGEEMIGAAIKEG Trigger: GCCCTCTTTGATAGCCGCTCCAATCATTTCTTCTCCTTGGACCCAATCACCGGTGTTGTCACCACAGCTGAGGAGCTGGATCGGGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | TGTGTCACAGCCATCCACGGACACCACGGCTACCTTCTGCTCAGATaGACCTTGGGGAAGCCCTGTCTGACCCAACAGTGGCTTGTTATA | + |
Preference number: 5 (lower is better) Translates to: CVTAIHGHHGYLLLR*TLGKPCLTQQWLVI Trigger: TATAACAAGCCACTGTTGGGTCAGACAGGGCTTCCCCAAGGTCCATCTGAGCAGAAGGTAGCCGTGGTGTCCGTGGATGGCTGTGACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS-3UTR CAA 90 bp | ACTGAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGCACTATTCTCCTTTGTaGTGGTCCCAAAGTCTCCCA | + |
Preference number: 5 (lower is better) Translates to: TEERLGHVLGGPVLFGKGHYSPL*WSQSLP Trigger: TGGGAGACTTTGGGACCACAACAAAGGAGAATAGTG...CCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS TCA 90 bp | CAGTCTGAGCATCCAGATAGAACTGGCCCCGAGCATTGCCACTCATaGTGCTGTAGTGCACTAGGGCATTGCTGCCCTTGTCTCTATCGG | + |
Preference number: 5 (lower is better) Translates to: QSEHPDRTGPEHCHS*CCSALGHCCPCLYR Trigger: CCGATAGAGACAAGGGCAGCAATGCCCTAGTGCACTACAGCATCATGAGTGGCAATGCTCGGGGCCAGTTCTATCTGGATGCTCAGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | CCATGGTGTACTCAAGTCGACCCGCCTCACCCTCATCTGGATCAATaGCTCTTAAGGATGCAACAGAGGTACCAGCAGGCTGGTTCTCAG | + |
Preference number: 5 (lower is better) Translates to: PWCTQVDPPHPHLDQ*LLRMQQRYQQAGSQ Trigger: CTGAGAACCAGCCTGCTGGTACCTCTGTTGCATCCTTAAGAGCCATTGATCCAGATGAGGGTGAGGCGGGTCGACTTGAGTACACCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 90 bp | GGTGACATTCACTACTATCTGAGCTGTGTCCTGCCTTGTGCCATCTaGGGCAGTCACTGCCAGCACATACTGCCGCTCGAGTTTGTAGTC | + |
Preference number: 5 (lower is better) Translates to: GDIHYYLSCVLPCAI*GSHCQHILPLEFVV Trigger: GACTACAAACTCGAGCGGCAGTATGTGCTGGCAGTGACTGCCTCAGATGGCACAAGGCAGGACACAGCTCAGATAGTAGTGAATGTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 90 bp | AAAGAAGAGAAATTCAGAGCCAGAGGAGTCCTCATCCACCGTGCCTaGCTTGATGCTCATGGCGACAGGCATGACCCCATTCAGCTGTTC | + |
Preference number: 5 (lower is better) Translates to: KEEKFRARGVLIHRA*LDAHGDRHDPIQLF Trigger: GAACAGCTGAATGGGGTCATGCCTGTCGCCATGAGCATCAAGGCAGGCACGGTGGATGAGGACTCCTCTGGCTCTGAATTTCTCTTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | CCAAGGAGAAGAAATGATTGGAGCGGCTATCAAAGAGGGCATCCATaGTGTACTCAAGTCGACCCGCCTCACCCTCATCTGGATCAATGG | + |
Preference number: 5 (lower is better) Translates to: PRRRNDWSGYQRGHP*CTQVDPPHPHLDQW Trigger: CCATTGATCCAGATGAGGGTGAGGCGGGTCGACTTGAGTACACCATGGATGCCCTCTTTGATAGCCGCTCCAATCATTTCTTCTCCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | CAAGGTAATTTGGTAAACACTCGCAGATGTAGCCGTGGGGTGTATTaGGTTTTCGGGTACACACGGACTGGTGCTCGCATGGGTTCAGGT | + |
Preference number: 5 (lower is better) Translates to: QGNLVNTRRCSRGVY*VFGYTRTGARMGSG Trigger: ACCTGAACCCATGCGAGCACCAGTCCGTGTGTACCCGAAAACCCAATACACCCCACGGCTACATCTGCGAGTGTTTACCAAATTACCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | CGTGACATATCCATAAGCACAGCAAAGCTTGTCATATGGTTGCACTaGCAGCTGACGTGGCTCTCGTTACGGAAGACGACTTCGCAGCCT | + |
Preference number: 5 (lower is better) Translates to: RDISISTAKLVIWLH*QLTWLSLRKTTSQP Trigger: AGGCTGCGAAGTCGTCTTCCGTAACGAGAGCCACGTCAGCTGCCAGTGCAACCATATGACAAGCTTTGCTGTGCTTATGGATATGTCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 90 bp | CTCTACACCAAAGCTGTAGAAATCAACCTCTTCCCGATCCAACTCTaGGGCCACAGAGATCCAGCCTGTGCCATTGTTAATGGTGAAGGG | + |
Preference number: 5 (lower is better) Translates to: LYTKAVEINLFPIQL*GHRDPACAIVNGEG Trigger: CCCTTCACCATTAACAATGGCACAGGCTGGATCTCTGTGGCCGCAGAGTTGGATCGGGAAGAGGTTGATTTCTACAGCTTTGGTGTAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 90 bp | GTGGGGTGTATTGGGTTTTCGGGTACACACGGACTGGTGCTCGCATaGGTTCAGGTCACACACATTTGTACAGTTGTCACCATAGTAACC | + |
Preference number: 5 (lower is better) Translates to: VGCIGFSGTHGLVLA*VQVTHICTVVTIVT Trigger: GGTTACTATGGTGACAACTGTACAAATGTGTGTGACCTGAACCCATGCGAGCACCAGTCCGTGTGTACCCGAAAACCCAATACACCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 90 bp | TCAGCTGTGGTGACAACACCGGTGATTGGGTCCAAGGAGAAGAAATaGTTGGAGCGGCTATCAAAGAGGGCATCCATGGTGTACTCAAGT | + |
Preference number: 5 (lower is better) Translates to: SAVVTTPVIGSKEKK*LERLSKRASMVYSS Trigger: ACTTGAGTACACCATGGATGCCCTCTTTGATAGCCGCTCCAATCATTTCTTCTCCTTGGACCCAATCACCGGTGTTGTCACCACAGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | GCGGCTGGTGTAGAGCCAGAGGTTCGAAGCAGAGGCTaGGCAGAGCCAGCCCACGGGGGCGCAGGCCCCAGA | + |
Preference number: 6 (lower is better) Translates to: AAGVEPEVRSRG*AEPAHGGAGPR Trigger: TCTGGGGCCTGCGCCCCCGTGGGCTGGCTCTGCCCAGCCTCTGCTTCGAACCTCTGGCTCTACACCAGCCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | GCGCCCCCTGGTGACGGCCTGCAGCAGGACGCCATCTaGCTGGCGTGTGCGGAACATGAGGCTGAGGTGCCA | + |
Preference number: 6 (lower is better) Translates to: APPGDGLQQDAI*LACAEHEAEVP Trigger: TGGCACCTCAGCCTCATGTTCCGCACACGCCAGGCAGATGGCGTCCTGCTGCAGGCCGTCACCAGGGGGCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | GGCTTGGTCCGCTCCTCGGTCTCCAGCAGCCGGAACTaGACGGTGACTGGCTTGTCCAGAGCCCGCGGCAGG | + |
Preference number: 6 (lower is better) Translates to: GLVRSSVSSSRN*TVTGLSRARGR Trigger: CCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGCTGCTGGAGACCGAGGAGCGGACCAAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 72 bp | AGGCCCAGGGCAGCTGTGAGGTTGCGTCGGATGCCGTaGTGGTTGGAGCGGAGGGCACGGAGGAGGGTGAGG | + |
Preference number: 6 (lower is better) Translates to: RPRAAVRLRRMP*WLERRARRRVR Trigger: CCTCACCCTCCTCCGTGCCCTCCGCTCCAACCAGCACGGCATCCGACGCAACCTCACAGCTGCCCTGGGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 72 bp | CGCAGGCCCGAGACAGGCCCTTTCTTCTCGAAGCCCTaGCGTTGGGCAGCACAGGAGGCTCGGGCCGACAGG | + |
Preference number: 6 (lower is better) Translates to: RRPETGPFFSKP*RWAAQEARADR Trigger: CCTGTCGGCCCGAGCCTCCTGTGCTGCCCAACGGCAGGGCTTCGAGAAGAAAGGGCCTGTCTCGGGCCTGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 72 bp | CCCTCCACACTTAGCACTACGTGGCCTGCCCGAAGCTaGAGGGTGATGGTGCTGCGCCCCCTGGTGACGGCC | + |
Preference number: 6 (lower is better) Translates to: PSTLSTTWPARS*RVMVLRPLVTA Trigger: GGCCGTCACCAGGGGGCGCAGCACCATCACCCTGCAGCTTCGGGCAGGCCACGTAGTGCTAAGTGTGGAGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | CCCAGGGCAGCTGTGAGGTTGCGTCGGATGCCGTGCTaGTTGGAGCGGAGGGCACGGAGGAGGGTGAGGAAG | + |
Preference number: 6 (lower is better) Translates to: PRAAVRLRRMPC*LERRARRRVRK Trigger: CTTCCTCACCCTCCTCCGTGCCCTCCGCTCCAACCAGCACGGCATCCGACGCAACCTCACAGCTGCCCTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS TCA 72 bp | CGTCCCCCGGATCCCAGAGAACGACAGGGCCCCACTTaGTCTCCCAGTAGTGGCGACGGTGGCAGCAGCAGC | + |
Preference number: 6 (lower is better) Translates to: RPPDPRERQGPT*SPSSGDGGSSS Trigger: GCTGCTGCTGCCACCGTCGCCACTACTGGGAGATCAAGTGGGGCCCTGTCGTTCTCTGGGATCCGGGGGACG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | GCTGCGGTTGAGGTACAGGCGCTCCTGGAGATCCTCTaGAGGCAGAAAGGGTGGCCCACCCCCGGGTCCTGG | + |
Preference number: 6 (lower is better) Translates to: AAVEVQALLEIL*RQKGWPTPGSW Trigger: CCAGGACCCGGGGGTGGGCCACCCTTTCTGCCTTCAGAGGATCTCCAGGAGCGCCTGTACCTCAACCGCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | TCCGCTCCTCGGTCTCCAGCAGCCGGAACTGCACGGTaGCTGGCTTGTCCAGAGCCCGCGGCAGGAGTTCCT | + |
Preference number: 6 (lower is better) Translates to: SAPRSPAAGTAR*LACPEPAAGVP Trigger: AGGAACTCCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGCTGCTGGAGACCGAGGAGCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CCA 72 bp | GCCTGGAGCCCTGTGCCCTCCACACTTAGCACTACGTaGCCTGCCCGAAGCTGCAGGGTGATGGTGCTGCGC | + |
Preference number: 6 (lower is better) Translates to: AWSPVPSTLSTT*PARSCRVMVLR Trigger: GCGCAGCACCATCACCCTGCAGCTTCGGGCAGGCCACGTAGTGCTAAGTGTGGAGGGCACAGGGCTCCAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | CTCCTCGGTCTCCAGCAGCCGGAACTGCACGGTGACTaGCTTGTCCAGAGCCCGCGGCAGGAGTTCCTCGTC | + |
Preference number: 6 (lower is better) Translates to: LLGLQQPELHGD*LVQSPRQEFLV Trigger: GACGAGGAACTCCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGCTGCTGGAGACCGAGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CAA 72 bp | ACGCGCTGCGCCGAGATGGCGGTGAGCAGGCTGCGGTaGAGGTACAGGCGCTCCTGGAGATCCTCTGAAGGC | + |
Preference number: 6 (lower is better) Translates to: TRCAEMAVSRLR*RYRRSWRSSEG Trigger: GCCTTCAGAGGATCTCCAGGAGCGCCTGTACCTCAACCGCAGCCTGCTCACCGCCATCTCGGCGCAGCGCGT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | TCGGTCTCCAGCAGCCGGAACTGCACGGTGACTGGCTaGTCCAGAGCCCGCGGCAGGAGTTCCTCGTCGTCG | + |
Preference number: 6 (lower is better) Translates to: SVSSSRNCTVTG*SRARGRSSSSS Trigger: CGACGACGAGGAACTCCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGCTGCTGGAGACCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS TCA 72 bp | TCTGTGCGTTGGTCCCTTCATCTGGGTCAGTGGCTGTaGCCCGGGCCACGGCCAGCCCGATGGGGCTGTTCT | + |
Preference number: 6 (lower is better) Translates to: SVRWSLHLGQWL*PGPRPARWGCS Trigger: AGAACAGCCCCATCGGGCTGGCCGTGGCCCGGGTCACAGCCACTGACCCAGATGAAGGGACCAACGCACAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | CCGAGCGAGGATCGATCTCAAAGGCGTCTGAGGGGCTaGCTCCGGCCCCCTCCAGCAGGCGGTACAGAATGT | + |
Preference number: 6 (lower is better) Translates to: PSEDRSQRRLRG*LRPPPAGGTEC Trigger: ACATTCTGTACCGCCTGCTGGAGGGGGCCGGAGGCAGCCCCTCAGACGCCTTTGAGATCGATCCTCGCTCGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | CACTGCCGAAGTAGCCAGAGGTGTGCTGGGTGGCATTaGGCAGGAGCAGGGCTAGCCTCTGGGAGCGTCCTG | + |
Preference number: 6 (lower is better) Translates to: HCRSSQRCAGWH*AGAGLASGSVL Trigger: CAGGACGCTCCCAGAGGCTAGCCCTGCTCCTGCGCAATGCCACCCAGCACACCTCTGGCTACTTCGGCAGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 72 bp | CCCTCAGCAAGAAGGGGATGTAGCTGGGCTGACTCTTaGCGGAGCGGCTGGCACTGTGCAACGAGCCAGCCG | + |
Preference number: 6 (lower is better) Translates to: PSARRGCSWADS*RSGWHCATSQP Trigger: CGGCTGGCTCGTTGCACAGTGCCAGCCGCTCCGGCAAGAGTCAGCCCAGCTACATCCCCTTCTTGCTGAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 72 bp | CTCATGGCGACAGGCATGACCCCATTCAGCTGTTCCTaGAGAGACTGGCGCGGAGGTGGGCGGGGAGGAGGT | + |
Preference number: 6 (lower is better) Translates to: LMATGMTPFSCS*RDWRGGGRGGG Trigger: ACCTCCTCCCCGCCCACCTCCGCGCCAGTCTCTGCAGGAACAGCTGAATGGGGTCATGCCTGTCGCCATGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CCA 72 bp | CACCAAACCCTCAGGCCATCGTGGTGGGGCACCAGGTaGCCGGTCAGCTCAATGCCCGATTCTCTGCAGCGG | + |
Preference number: 6 (lower is better) Translates to: HQTLRPSWWGTR*PVSSMPDSLQR Trigger: CCGCTGCAGAGAATCGGGCATTGAGCTGACCGGCCACCTGGTGCCCCACCACGATGGCCTGAGGGTTTGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | GCCCCTGATTCTGGACACCAAACCCTCAGGCCATCGTaGTGGGGCACCAGGTGGCCGGTCAGCTCAATGCCC | + |
Preference number: 6 (lower is better) Translates to: APDSGHQTLRPS*WGTRWPVSSMP Trigger: GGGCATTGAGCTGACCGGCCACCTGGTGCCCCACCACGATGGCCTGAGGGTTTGGTGTCCAGAATCAGGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | GCCCTTGTCTCTATCGGAGGCGGTGACTCGGAGAACTaGGGCTCCTGGGGTCACATCCTCCCGCACCTGGAC | + |
Preference number: 6 (lower is better) Translates to: ALVSIGGGDSEN*GSWGHILPHLD Trigger: GTCCAGGTGCGGGAGGATGTGACCCCAGGAGCCCCAGTTCTCCGAGTCACCGCCTCCGATAGAGACAAGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | CCCGAGACAGGCCCTTTCTTCTCGAAGCCCTGCCGTTaGGCAGCACAGGAGGCTCGGGCCGACAGGATGTAC | + |
Preference number: 6 (lower is better) Translates to: PETGPFFSKPCR*AAQEARADRMY Trigger: GTACATCCTGTCGGCCCGAGCCTCCTGTGCTGCCCAACGGCAGGGCTTCGAGAAGAAAGGGCCTGTCTCGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CAA 72 bp | GCAGGGTCGGGACTGGGCTTCCGGCTGCAGGCGAACTaGAGTGCTTTCCGGACCTCCTTGCTGAGCACCACG | + |
Preference number: 6 (lower is better) Translates to: AGSGLGFRLQAN*SAFRTSLLSTT Trigger: CGTGGTGCTCAGCAAGGAGGTCCGGAAAGCACTCAAGTTCGCCTGCAGCCGGAAGCCCAGTCCCGACCCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CAA 90 bp | GGCCCACCCCCGGGTCCTGGAGGCTGGCCCACCGACAGGCTTACGTaGAGGATATGGCCGCCTGGGGCATCAGTATCCCTTTGCACATTG | + |
Preference number: 6 (lower is better) Translates to: GPPPGPGGWPTDRLT*RIWPPGASVSLCTL Trigger: CAATGTGCAAAGGGATACTGATGCCCCAGGCGGCCATATCCTCAACGTAAGCCTGTCGGTGGGCCAGCCTCCAGGACCCGGGGGTGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | CAGAATGGCATGGCCAGGGCCCCCGCTGGCTCCCAGTaGCAGCTGTGCATGATGCCAGTCACCATCATTGGC | + |
Preference number: 6 (lower is better) Translates to: QNGMARAPAGSQ*QLCMMPVTIIG Trigger: GCCAATGATGGTGACTGGCATCATGCACAGCTGGCACTGGGAGCCAGCGGGGGCCCTGGCCATGCCATTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | CTGATACCCTCAGGTGTCTCGCTTACCCTGACACCCTaGAAACAGCCCCGGAAGCCACGGGCCACTCCGCTG | + |
Preference number: 6 (lower is better) Translates to: LIPSGVSLTLTP*KQPRKPRATPL Trigger: CAGCGGAGTGGCCCGTGGCTTCCGGGGCTGTTTGCAGGGTGTCAGGGTAAGCGAGACACCTGAGGGTATCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | GGCCGGTCAGCTCAATGCCCGATTCTCTGCAGCGGCTaGTGTAGAGCCAGAGGTTCGAAGCAGAGGCTGGGC | + |
Preference number: 6 (lower is better) Translates to: GRSAQCPILCSG*CRARGSKQRLG Trigger: GCCCAGCCTCTGCTTCGAACCTCTGGCTCTACACCAGCCGCTGCAGAGAATCGGGCATTGAGCTGACCGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | CAAACAGCCCCGGAAGCCACGGGCCACTCCGCTGGCTaGCCCAGGAACTCCCCCGACTGTAATATTGCTCAG | + |
Preference number: 6 (lower is better) Translates to: QTAPEATGHSAG*PRNSPDCNIAQ Trigger: CTGAGCAATATTACAGTCGGGGGAGTTCCTGGGCCAGCCAGCGGAGTGGCCCGTGGCTTCCGGGGCTGTTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | CGAACCGCGTGCGGGGCCACCAGATCCCAGCCTCTATaGCCCGTGGGCAGCTGTCGTAATTCACTTCACAGC | + |
Preference number: 6 (lower is better) Translates to: RTACGATRSQPL*PVGSCRNSLHS Trigger: GCTGTGAAGTGAATTACGACAGCTGCCCACGGGCCATAGAGGCTGGGATCTGGTGGCCCCGCACGCGGTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | GCGTGGACTCCTCCCTCAGCAAGAAGGGGATGTAGCTaGGCTGACTCTTGCCGGAGCGGCTGGCACTGTGCA | + |
Preference number: 6 (lower is better) Translates to: AWTPPSARRGCS*ADSCRSGWHCA Trigger: TGCACAGTGCCAGCCGCTCCGGCAAGAGTCAGCCCAGCTACATCCCCTTCTTGCTGAGGGAGGAGTCCACGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CAA 72 bp | CCGGGTCCTGGAGGCTGGCCCACCGACAGGCTTACGTaGAGGATATGGCCGCCTGGGGCATCAGTATCCCTT | + |
Preference number: 6 (lower is better) Translates to: PGPGGWPTDRLT*RIWPPGASVSL Trigger: AAGGGATACTGATGCCCCAGGCGGCCATATCCTCAACGTAAGCCTGTCGGTGGGCCAGCCTCCAGGACCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | CCCAGCAACAAGGGCCCTGTCAGGTCCAGAGACTTCTaGCTGCCTCCTTGGGTGCCCTGGGCAGCACAGGAG | + |
Preference number: 6 (lower is better) Translates to: PSNKGPVRSRDF*LPPWVPWAAQE Trigger: CTCCTGTGCTGCCCAGGGCACCCAAGGAGGCAGCAAGAAGTCTCTGGACCTGACAGGGCCCTTGTTGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | CCGCTGGCTGGCCCAGGAACTCCCCCGACTGTAATATaGCTCAGGTGCAGTCCATGCAGCCGAGGGCCCAGA | + |
Preference number: 6 (lower is better) Translates to: PLAGPGTPPTVI*LRCSPCSRGPR Trigger: TCTGGGCCCTCGGCTGCATGGACTGCACCTGAGCAATATTACAGTCGGGGGAGTTCCTGGGCCAGCCAGCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | CATGTTGTTGGGCTTGGCCTTCCAAGAACAGGCCGCTaGGGTCCCCTAGGCCAGGGGGAACCTGGCCAGGGT | + |
Preference number: 6 (lower is better) Translates to: HVVGLGLPRTGR*GPLGQGEPGQG Trigger: ACCCTGGCCAGGTTCCCCCTGGCCTAGGGGACCCAAGCGGCCTGTTCTTGGAAGGCCAAGCCCAACAACATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CAA 90 bp | CGGGCCACTCCGCTGGCTGGCCCAGGAACTCCCCCGACTGTAATATaGCTCAGGTGCAGTCCATGCAGCCGAGGGCCCAGATTACCCTCT | + |
Preference number: 6 (lower is better) Translates to: RATPLAGPGTPPTVI*LRCSPCSRGPRLPS Trigger: AGAGGGTAATCTGGGCCCTCGGCTGCATGGACTGCACCTGAGCAATATTACAGTCGGGGGAGTTCCTGGGCCAGCCAGCGGAGTGGCCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | GCCCTGGGGCCTGTGCCAGCTTGCAAGACTGGCATCTaGGCCGTGGGGCCTTTAAGCAAGGGTGCTCTTCAG | + |
Preference number: 6 (lower is better) Translates to: ALGPVPACKTGI*AVGPLSKGALQ Trigger: CTGAAGAGCACCCTTGCTTAAAGGCCCCACGGCTCAGATGCCAGTCTTGCAAGCTGGCACAGGCCCCAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | GTAAGCGTGGCCAAGGCACTCCGTCGGGGCATACCGTaGTCCTGTGCAGTGACCCTGAAGACGTGGGTGCTC | + |
Preference number: 6 (lower is better) Translates to: VSVAKALRRGIP*SCAVTLKTWVL Trigger: GAGCACCCACGTCTTCAGGGTCACTGCACAGGATCACGGTATGCCCCGACGGAGTGCCTTGGCCACGCTTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | CCGGGGGTGTGGCCAACGTGGCTGCCACGGCCTGAATaGAGAGTCCCAGCAGTGGTGAGAGAAAGCGTTCTG | + |
Preference number: 6 (lower is better) Translates to: PGVWPTWLPRPE*RVPAVVRESVL Trigger: CAGAACGCTTTCTCTCACCACTGCTGGGACTCTTCATTCAGGCCGTGGCAGCCACGTTGGCCACACCCCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | GAGCCAAGAGCCGTGTGGCCAGCTGGTAGGCCACCTTaGCATCACTGCCGAAGTAGCCAGAGGTGTGCTGGG | + |
Preference number: 6 (lower is better) Translates to: EPRAVWPAGRPP*HHCRSSQRCAG Trigger: CCCAGCACACCTCTGGCTACTTCGGCAGTGATGTCAAGGTGGCCTACCAGCTGGCCACACGGCTCTTGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 72 bp | GCACCAGGTGGCCGGTCAGCTCAATGCCCGATTCTCTaGAGCGGCTGGTGTAGAGCCAGAGGTTCGAAGCAG | + |
Preference number: 6 (lower is better) Translates to: APGGRSAQCPIL*SGWCRARGSKQ Trigger: CTGCTTCGAACCTCTGGCTCTACACCAGCCGCTGCAGAGAATCGGGCATTGAGCTGACCGGCCACCTGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | GGCCAAGGCACTCCGTCGGGGCATACCGTGATCCTGTaGAGTGACCCTGAAGACGTGGGTGCTCTTGGTCTC | + |
Preference number: 6 (lower is better) Translates to: GQGTPSGHTVIL*SDPEDVGALGL Trigger: GAGACCAAGAGCACCCACGTCTTCAGGGTCACTGCACAGGATCACGGTATGCCCCGACGGAGTGCCTTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | CATCCAGACAGAGGCAGGTATAGCCACCCTCTCGGCTaGGGCAGCGCCCATGGGGTCCACAAGGTCTTGAGT | + |
Preference number: 6 (lower is better) Translates to: HPDRGRYSHPLG*GSAHGVHKVLS Trigger: ACTCAAGACCTTGTGGACCCCATGGGCGCTGCCGCAGCCGAGAGGGTGGCTATACCTGCCTCTGTCTGGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | CTGGCTCAAGACGCAGAGATGACGCCTGGAGCCCTGTaGCCTCCACACTTAGCACTACGTGGCCTGCCCGAA | + |
Preference number: 6 (lower is better) Translates to: LAQDAEMTPGAL*PPHLALRGLPE Trigger: TTCGGGCAGGCCACGTAGTGCTAAGTGTGGAGGGCACAGGGCTCCAGGCGTCATCTCTGCGTCTTGAGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | TGGCGTAAGCCTCATAGTGCTGGAGCAGCCAGGCGGTaGCACCCTCTGTCTGCTGGATCAGTTCCCAGTGCC | + |
Preference number: 6 (lower is better) Translates to: WRKPHSAGAARR*HPLSAGSVPSA Trigger: GGCACTGGGAACTGATCCAGCAGACAGAGGGTGGCACCGCCTGGCTGCTCCAGCACTATGAGGCTTACGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 72 bp | GTCGGGACTGGGCTTCCGGCTGCAGGCGAACTTGAGTaGTTTCCGGACCTCCTTGCTGAGCACCACGTAGGA | + |
Preference number: 6 (lower is better) Translates to: VGTGLPAAGELE*FPDLLAEHHVG Trigger: TCCTACGTGGTGCTCAGCAAGGAGGTCCGGAAAGCACTCAAGTTCGCCTGCAGCCGGAAGCCCAGTCCCGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CCA 72 bp | CCTGATTCTGGACACCAAACCCTCAGGCCATCGTGGTaGGGCACCAGGTGGCCGGTCAGCTCAATGCCCGAT | + |
Preference number: 6 (lower is better) Translates to: PDSGHQTLRPSW*GTRWPVSSMPD Trigger: ATCGGGCATTGAGCTGACCGGCCACCTGGTGCCCCACCACGATGGCCTGAGGGTTTGGTGTCCAGAATCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | GACAGTAACTGTCACTTCCATGGGTGTGCGGGCTGGTaGCATGCCCTTGTCCACCGCATAGGCCCGCAGGAC | + |
Preference number: 6 (lower is better) Translates to: DSNCHFHGCAGW*HALVHRIGPQD Trigger: GTCCTGCGGGCCTATGCGGTGGACAAGGGCATGCCACCAGCCCGCACACCCATGGAAGTGACAGTTACTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | CAGGACAGTAACTGTCACTTCCATGGGTGTGCGGGCTaGTGGCATGCCCTTGTCCACCGCATAGGCCCGCAG | + |
Preference number: 6 (lower is better) Translates to: QDSNCHFHGCAG*WHALVHRIGPQ Trigger: CTGCGGGCCTATGCGGTGGACAAGGGCATGCCACCAGCCCGCACACCCATGGAAGTGACAGTTACTGTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | AAGCTGTACGTCAGGCTGTCTGAGATATCGGGGTCGTaGGCAGGCACACGGCCTATGGCACCACCGGGGAAG | + |
Preference number: 6 (lower is better) Translates to: KLYVRLSEISGS*AGTRPMAPPGK Trigger: CTTCCCCGGTGGTGCCATAGGCCGTGTGCCTGCCCACGACCCCGATATCTCAGACAGCCTGACGTACAGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | ATGAAGGAGCGGGCAGGGAAGCTGCGTGTGGTCACCTaGCAGAAGGGTTTCTCAAAGTCCCCGGAGGGGCAG | + |
Preference number: 6 (lower is better) Translates to: MKERAGKLRVVT*QKGFSKSPEGQ Trigger: CTGCCCCTCCGGGGACTTTGAGAAACCCTTCTGCCAGGTGACCACACGCAGCTTCCCTGCCCGCTCCTTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | CGCTCCTTGGTAGCAAACGAGAGGGCCAGGGTGAAGTaGAAGCGCTGGCGCAGGCCACGGAAGGTGATGAAG | + |
Preference number: 6 (lower is better) Translates to: RSLVANERARVK*KRWRRPRKVMK Trigger: CTTCATCACCTTCCGTGGCCTGCGCCAGCGCTTCCACTTCACCCTGGCCCTCTCGTTTGCTACCAAGGAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | AGTCAAAGGACAGAATGGCATGGCCAGGGCCCCCGCTaGCTCCCAGTGCCAGCTGTGCATGATGCCAGTCAC | + |
Preference number: 6 (lower is better) Translates to: SQRTEWHGQGPR*LPVPAVHDASH Trigger: GTGACTGGCATCATGCACAGCTGGCACTGGGAGCCAGCGGGGGCCCTGGCCATGCCATTCTGTCCTTTGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | AGGGGATGTAGCTGGGCTGACTCTTGCCGGAGCGGCTaGCACTGTGCAACGAGCCAGCCGAATCTCCGTAAG | + |
Preference number: 6 (lower is better) Translates to: RGCSWADSCRSG*HCATSQPNLRK Trigger: CTTACGGAGATTCGGCTGGCTCGTTGCACAGTGCCAGCCGCTCCGGCAAGAGTCAGCCCAGCTACATCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CAA 72 bp | GACACCAGCACACTCATGATGGCTTCCAGGGGCCGGTaGTTGTCCAGTGCCCGGCTCAGTCTCAGCTCACCG | + |
Preference number: 6 (lower is better) Translates to: DTSTLMMASRGR*LSSARLSLSSP Trigger: CGGTGAGCTGAGACTGAGCCGGGCACTGGACAACAACCGGCCCCTGGAAGCCATCATGAGTGTGCTGGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 90 bp | ACACCATCTGACACCAGCACACTCATGATGGCTTCCAGGGGCCGGTaGTTGTCCAGTGCCCGGCTCAGTCTCAGCTCACCGGTGGAGGCA | + |
Preference number: 6 (lower is better) Translates to: TPSDTSTLMMASRGR*LSSARLSLSSPVEA Trigger: TGCCTCCACCGGTGAGCTGAGACTGAGCCGGGCACTGGACAACAACCGGCCCCTGGAAGCCATCATGAGTGTGCTGGTGTCAGATGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 90 bp | CAGCAACAAGGGCCCTGTCAGGTCCAGAGACTTCTTGCTGCCTCCTaGGGTGCCCTGGGCAGCACAGGAGTAGTTGCCCAGCATAGCTCC | + |
Preference number: 6 (lower is better) Translates to: QQQGPCQVQRLLAAS*GALGSTGVVAQHSS Trigger: GGAGCTATGCTGGGCAACTACTCCTGTGCTGCCCAGGGCACCCAAGGAGGCAGCAAGAAGTCTCTGGACCTGACAGGGCCCTTGTTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 90 bp | GTGCAGTCCATGCAGCCGAGGGCCCAGATTACCCTCTGCCTTCTGTaGCCCATAGTCAAAGGACAGAATGGCATGGCCAGGGCCCCCGCT | + |
Preference number: 6 (lower is better) Translates to: VQSMQPRAQITLCLL*PIVKGQNGMARAPA Trigger: AGCGGGGGCCCTGGCCATGCCATTCTGTCCTTTGACTATGGGCAACAGAAGGCAGAGGGTAATCTGGGCCCTCGGCTGCATGGACTGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | CTAGGGCATTGCTGCCCTTGTCTCTATCGGAGGCGGTaGCTCGGAGAACTGGGGCTCCTGGGGTCACATCCT | + |
Preference number: 6 (lower is better) Translates to: LGHCCPCLYRRR*LGELGLLGSHP Trigger: AGGATGTGACCCCAGGAGCCCCAGTTCTCCGAGTCACCGCCTCCGATAGAGACAAGGGCAGCAATGCCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | TTGTCCAGAGCCCGCGGCAGGAGTTCCTCGTCGTCGTaGACGCTGATGCTCACCACAGGGGTGTTGATGACG | + |
Preference number: 6 (lower is better) Translates to: LSRARGRSSSSS*TLMLTTGVLMT Trigger: CGTCATCAACACCCCTGTGGTGAGCATCAGCGTTCACGACGACGAGGAACTCCTGCCGCGGGCTCTGGACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 72 bp | GCAACAAGGGCCCTGTCAGGTCCAGAGACTTCTTGCTaGCTCCTTGGGTGCCCTGGGCAGCACAGGAGTAGT | + |
Preference number: 6 (lower is better) Translates to: ATRALSGPETSC*LLGCPGQHRSS Trigger: ACTACTCCTGTGCTGCCCAGGGCACCCAAGGAGGCAGCAAGAAGTCTCTGGACCTGACAGGGCCCTTGTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | CTATCCACCTGGAGGTCCTTCATGCAGCCCACAAAGTaGCGCATTCGGACGGGGAAGCTCTCGGGCAGATCC | + |
Preference number: 6 (lower is better) Translates to: LSTWRSFMQPTK*RIRTGKLSGRS Trigger: GGATCTGCCCGAGAGCTTCCCCGTCCGAATGCGGCACTTTGTGGGCTGCATGAAGGACCTCCAGGTGGATAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | TGTCGATGTGCCGGCTATCCACCTGGAGGTCCTTCATaGAGCCCACAAAGTGCCGCATTCGGACGGGGAAGC | + |
Preference number: 6 (lower is better) Translates to: CRCAGYPPGGPS*SPQSAAFGRGS Trigger: GCTTCCCCGTCCGAATGCGGCACTTTGTGGGCTGCATGAAGGACCTCCAGGTGGATAGCCGGCACATCGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | TCCAGCCAGGGTGTGGTAGATGATGACACTGGCCACTaGCTCTCCCTGACTCAGTTCTGGGTGCCTCCGCTG | + |
Preference number: 6 (lower is better) Translates to: SSQGVVDDDTGH*LSLTQFWVPPL Trigger: CAGCGGAGGCACCCAGAACTGAGTCAGGGAGAGGCAGTGGCCAGTGTCATCATCTACCACACCCTGGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CCA 72 bp | CATTATCATCCTCCACCGACAGGAAAACAATGGCTGTaGAACTCCGCGGGCCTGGGTCCCGGCCCTGGTCAC | + |
Preference number: 6 (lower is better) Translates to: HYHPPPTGKQWL*NSAGLGPGPGH Trigger: GTGACCAGGGCCGGGACCCAGGCCCGCGGAGTTCCACAGCCATTGTTTTCCTGTCGGTGGAGGATGATAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | TGGATTCGAGTCACAGGGATCTGGCCAGCTACAGCCTaGCTCCACATTGATGCTCTCCCCGCGGCTGGGATC | + |
Preference number: 6 (lower is better) Translates to: WIRVTGIWPATA*LHIDALPAAGI Trigger: GATCCCAGCCGCGGGGAGAGCATCAATGTGGAGCCAGGCTGTAGCTGGCCAGATCCCTGTGACTCGAATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | TTAGGTAGGTGTGCCGCATATTCTGGGCAAGGGCGCTaGCGTAAGCCTCATAGTGCTGGAGCAGCCAGGCGG | + |
Preference number: 6 (lower is better) Translates to: LGRCAAYSGQGR*RKPHSAGAARR Trigger: CCGCCTGGCTGCTCCAGCACTATGAGGCTTACGCCAGCGCCCTTGCCCAGAATATGCGGCACACCTACCTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CAA 72 bp | GCGATGACTGTACAGGCAAAAGGGAGGTCAGCCTGGTaGATGCCCAGGAGAAAGACCAGCTGGGCCAGGCCC | + |
Preference number: 6 (lower is better) Translates to: AMTVQAKGRSAW*MPRRKTSWARP Trigger: GGGCCTGGCCCAGCTGGTCTTTCTCCTGGGCATCAACCAGGCTGACCTCCCTTTTGCCTGTACAGTCATCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS TCA 72 bp | GCATCAGTATCCCTTTGCACATTGAAGACCACCACATaGTCCGGGGGTGTGGCCAACGTGGCTGCCACGGCC | + |
Preference number: 6 (lower is better) Translates to: ASVSLCTLKTTT*SGGVANVAATA Trigger: GGCCGTGGCAGCCACGTTGGCCACACCCCCGGATCATGTGGTGGTCTTCAATGTGCAAAGGGATACTGATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | TGGTGGGGCAGCCAGGCACAGTGCCATTGTTGGCAATaGAGTCGGCCATGTCGATGTGCCGGCTATCCACCT | + |
Preference number: 6 (lower is better) Translates to: WWGSQAQCHCWQ*SRPCRCAGYPP Trigger: AGGTGGATAGCCGGCACATCGACATGGCCGACTTCATTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | GACTGGCATCTGAGCCGTGGGGCCTTTAAGCAAGGGTaGTCTTCAGGCAGGGTCAGCGTGCCTTGTGGAGAA | + |
Preference number: 6 (lower is better) Translates to: DWHLSRGAFKQG*SSGRVSVPCGE Trigger: TTCTCCACAAGGCACGCTGACCCTGCCTGAAGAGCACCCTTGCTTAAAGGCCCCACGGCTCAGATGCCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | CAGCCTGTGCCATTGTTAATGGTGAAGGGAAAGTCGTaGCCAACCCCTGCCAGGCTATACTCGAGGCGGGCG | + |
Preference number: 6 (lower is better) Translates to: QPVPLLMVKGKS*PTPARLYSRRA Trigger: CGCCCGCCTCGAGTATAGCCTGGCAGGGGTTGGGCACGACTTTCCCTTCACCATTAACAATGGCACAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | TGGGAGCGTCCTGAGTCCAGGCCTGATTCGTTCCTCTaGAGCCGCTCAGCGAAGCCCTTTAGCTCTGAGAAG | + |
Preference number: 6 (lower is better) Translates to: WERPESRPDSFL*SRSAKPFSSEK Trigger: CTTCTCAGAGCTAAAGGGCTTCGCTGAGCGGCTGCAGAGGAACGAATCAGGCCTGGACTCAGGACGCTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CCA 72 bp | CAGCAGGCTGGTTCTCAGGCACTGTGGCCTGGTAGCTaGGAGGCTGGAACTGGGGAGCTGTATTCACATTCC | + |
Preference number: 6 (lower is better) Translates to: QQAGSQALWPGS*EAGTGELYSHS Trigger: GGAATGTGAATACAGCTCCCCAGTTCCAGCCTCCCAGCTACCAGGCCACAGTGCCTGAGAACCAGCCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | ACGGGCGGGTTATCATTGCGGTCAAGGAGGCGGACATaGACAGTAGCCCTGCTCACCAAGGGAGCAGACGTA | + |
Preference number: 6 (lower is better) Translates to: TGGLSLRSRRRT*TVALLTKGADV Trigger: TACGTCTGCTCCCTTGGTGAGCAGGGCTACTGTCCATGTCCGCCTCCTTGACCGCAATGATAACCCGCCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | GGAGGCTGGCCCACCGACAGGCTTACGTTGAGGATATaGCCGCCTGGGGCATCAGTATCCCTTTGCACATTG | + |
Preference number: 6 (lower is better) Translates to: GGWPTDRLTLRI*PPGASVSLCTL Trigger: CAATGTGCAAAGGGATACTGATGCCCCAGGCGGCCATATCCTCAACGTAAGCCTGTCGGTGGGCCAGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | CCAGTGCCAGCTGTGCATGATGCCAGTCACCATCATTaGCTCGGCCTGGCTCAAGACGCAGAGATGACGCCT | + |
Preference number: 6 (lower is better) Translates to: PVPAVHDASHHH*LGLAQDAEMTP Trigger: AGGCGTCATCTCTGCGTCTTGAGCCAGGCCGAGCCAATGATGGTGACTGGCATCATGCACAGCTGGCACTGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | AGTGCCCGGCTCAGTCTCAGCTCACCGGTGGAGGCATaGAGCAGGACCAAGCTGAGTTCATTTCCTCGCTCG | + |
Preference number: 6 (lower is better) Translates to: SARLSLSSPVEA*SRTKLSSFPRS Trigger: CGAGCGAGGAAATGAACTCAGCTTGGTCCTGCTCAATGCCTCCACCGGTGAGCTGAGACTGAGCCGGGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | TCAGAGCCAGAGGAGTCCTCATCCACCGTGCCTGCCTaGATGCTCATGGCGACAGGCATGACCCCATTCAGC | + |
Preference number: 6 (lower is better) Translates to: SEPEESSSTVPA*MLMATGMTPFS Trigger: GCTGAATGGGGTCATGCCTGTCGCCATGAGCATCAAGGCAGGCACGGTGGATGAGGACTCCTCTGGCTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CAA 90 bp | TCGCACACGATCTTCTTGGTGGGGCAGCCAGGCACAGTGCCATTGTaGGCAATGAAGTCGGCCATGTCGATGTGCCGGCTATCCACCTGG | + |
Preference number: 6 (lower is better) Translates to: SHTIFLVGQPGTVPL*AMKSAMSMCRLSTW Trigger: CCAGGTGGATAGCCGGCACATCGACATGGCCGACTTCATTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGATCGTGTGCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 90 bp | CTGTCGCACACGATCTTCTTGGTGGGGCAGCCAGGCACAGTGCCATaGTTGGCAATGAAGTCGGCCATGTCGATGTGCCGGCTATCCACC | + |
Preference number: 6 (lower is better) Translates to: LSHTIFLVGQPGTVP*LAMKSAMSMCRLST Trigger: GGTGGATAGCCGGCACATCGACATGGCCGACTTCATTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGATCGTGTGCGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 90 bp | GACGGCCACCGTCCTGAGCCCGGATCCGAAGCGTATACTCTTTGGTaGTCTCATAGTCGAGTGGGCTTACCACATCCAGGGCTCCAGTCT | + |
Preference number: 6 (lower is better) Translates to: DGHRPEPGSEAYTLW*SHSRVGLPHPGLQS Trigger: AGACTGGAGCCCTGGATGTGGTAAGCCCACTCGACTATGAGACAACCAAAGAGTATACGCTTCGGATCCGGGCTCAGGACGGTGGCCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 90 bp | CAGGTGCCACCGTTGTGGCAAATGCTGCTGTCGCACACGATCTTCTaGGTGGGGCAGCCAGGCACAGTGCCATTGTTGGCAATGAAGTCG | + |
Preference number: 6 (lower is better) Translates to: QVPPLWQMLLSHTIF*VGQPGTVPLLAMKS Trigger: CGACTTCATTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGATCGTGTGCGACAGCAGCATTTGCCACAACGGTGGCACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 90 bp | CACTCGCAGCTGAACGCATTCCACTGGTTCACACAGGTGCCACCGTaGTGGCAAATGCTGCTGTCGCACACGATCTTCTTGGTGGGGCAG | + |
Preference number: 6 (lower is better) Translates to: HSQLNAFHWFTQVPP*WQMLLSHTIFLVGQ Trigger: CTGCCCCACCAAGAAGATCGTGTGCGACAGCAGCATTTGCCACAACGGTGGCACCTGTGTGAACCAGTGGAATGCGTTCAGCTGCGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 90 bp | TCTCCCGTGGCCGCTCTTCAAGGGGCCCACTACCACTATTCTCCTTaGTTGTGGTCCCAAAGTCTCCCAGCCAAGGGACCTTCCCAGAAC | + |
Preference number: 6 (lower is better) Translates to: SPVAALQGAHYHYSP*LWSQSLPAKGPSQN Trigger: GTTCTGGGAAGGTCCCTTGGCTGGGAGACTTTGGGACCACAACAAAGGAGAATAGTGGTAGTGGGCCCCTTGAAGAGCGGCCACGGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS TCA 72 bp | GCCTTCAGAGGATGGCGGAAGAGGGATATGAGCCCCTaGTTCTGGACACCAAACCCTCAGGCCATCGTGGTG | + |
Preference number: 6 (lower is better) Translates to: AFRGWRKRDMSP*FWTPNPQAIVV Trigger: CACCACGATGGCCTGAGGGTTTGGTGTCCAGAATCAGGGGCTCATATCCCTCTTCCGCCATCCTCTGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | CCAGAGACATTGGAGAGTGGAGGACGGCCACCGTCCTaGGCCCGGATCCGAAGCGTATACTCTTTGGTTGTC | + |
Preference number: 6 (lower is better) Translates to: PETLESGGRPPS*ARIRSVYSLVV Trigger: GACAACCAAAGAGTATACGCTTCGGATCCGGGCTCAGGACGGTGGCCGTCCTCCACTCTCCAATGTCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | TCACACTGTGGACACCATCTGACACCAGCACACTCATaGTGGCTTCCAGGGGCCGGTTGTTGTCCAGTGCCC | + |
Preference number: 6 (lower is better) Translates to: SHCGHHLTPAHS*WLPGAGCCPVP Trigger: GGGCACTGGACAACAACCGGCCCCTGGAAGCCATCATGAGTGTGCTGGTGTCAGATGGTGTCCACAGTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | TCACTCAGAGCCAGAGGAGTCCTCATCCACCGTGCCTaGCTTGATGCTCATGGCGACAGGCATGACCCCATT | + |
Preference number: 6 (lower is better) Translates to: SLRARGVLIHRA*LDAHGDRHDPI Trigger: AATGGGGTCATGCCTGTCGCCATGAGCATCAAGGCAGGCACGGTGGATGAGGACTCCTCTGGCTCTGAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147251.2 |
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CDS CCA 72 bp | TGTCTAGGACTTGCACTGTTACTAGGCCAGAGACATTaGAGAGTGGAGGACGGCCACCGTCCTGAGCCCGGA | + |
Preference number: 6 (lower is better) Translates to: CLGLALLLGQRH*RVEDGHRPEPG Trigger: TCCGGGCTCAGGACGGTGGCCGTCCTCCACTCTCCAATGTCTCTGGCCTAGTAACAGTGCAAGTCCTAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | CGTCCTCGGGGTCACAGACTCGGGACAAAGAACCAGTaGGGTAACAGTCACACAAGAGACAAGTGGGGCTGC | + |
Preference number: 6 (lower is better) Translates to: RPRGHRLGTKNQ*GNSHTRDKWGC Trigger: GCAGCCCCACTTGTCTCTTGTGTGACTGTTACCCCACTGGTTCTTTGTCCCGAGTCTGTGACCCCGAGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | AGGTCACTGTCAGAGTCCGTGTCGGGATCATGTTGTTaGGCTTGGCCTTCCAAGAACAGGCCGCTTGGGTCC | + |
Preference number: 6 (lower is better) Translates to: RSLSESVSGSCC*AWPSKNRPLGS Trigger: GGACCCAAGCGGCCTGTTCTTGGAAGGCCAAGCCCAACAACATGATCCCGACACGGACTCTGACAGTGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CAA 72 bp | CCTCCCACCAACAGGTTGACACAGGTACCCCCGTTCTaGCAGACACCTGGAGTACAACGGCCTGAGTGGGTA | + |
Preference number: 6 (lower is better) Translates to: PPTNRLTQVPPF*QTPGVQRPEWV Trigger: TACCCACTCAGGCCGTTGTACTCCAGGTGTCTGCAAGAACGGGGGTACCTGTGTCAACCTGTTGGTGGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | ACGATCTTCTTGGTGGGGCAGCCAGGCACAGTGCCATaGTTGGCAATGAAGTCGGCCATGTCGATGTGCCGG | + |
Preference number: 6 (lower is better) Translates to: TIFLVGQPGTVP*LAMKSAMSMCR Trigger: CCGGCACATCGACATGGCCGACTTCATTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGATCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | CCGTTGTGGCAAATGCTGCTGTCGCACACGATCTTCTaGGTGGGGCAGCCAGGCACAGTGCCATTGTTGGCA | + |
Preference number: 6 (lower is better) Translates to: PLWQMLLSHTIF*VGQPGTVPLLA Trigger: TGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGATCGTGTGCGACAGCAGCATTTGCCACAACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | CAGGTCACTGTCAGAGTCCGTGTCGGGATCATGTTGTaGGGCTTGGCCTTCCAAGAACAGGCCGCTTGGGTC | + |
Preference number: 6 (lower is better) Translates to: QVTVRVRVGIML*GLAFQEQAAWV Trigger: GACCCAAGCGGCCTGTTCTTGGAAGGCCAAGCCCAACAACATGATCCCGACACGGACTCTGACAGTGACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CAA 90 bp | TCTTCCCGATCCAACTCTGCGGCCACAGAGATCCAGCCTGTGCCATaGTTAATGGTGAAGGGAAAGTCGTGCCCAACCCCTGCCAGGCTA | + |
Preference number: 6 (lower is better) Translates to: SSRSNSAATEIQPVP*LMVKGKSCPTPARL Trigger: TAGCCTGGCAGGGGTTGGGCACGACTTTCCCTTCACCATTAACAATGGCACAGGCTGGATCTCTGTGGCCGCAGAGTTGGATCGGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 90 bp | CAGGCTTACGTTGAGGATATGGCCGCCTGGGGCATCAGTATCCCTTaGCACATTGAAGACCACCACATGATCCGGGGGTGTGGCCAACGT | + |
Preference number: 6 (lower is better) Translates to: QAYVEDMAAWGISIP*HIEDHHMIRGCGQR Trigger: ACGTTGGCCACACCCCCGGATCATGTGGTGGTCTTCAATGTGCAAAGGGATACTGATGCCCCAGGCGGCCATATCCTCAACGTAAGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | CACTACTATCTGAGCTGTGTCCTGCCTTGTGCCATCTaGGGCAGTCACTGCCAGCACATACTGCCGCTCGAG | + |
Preference number: 6 (lower is better) Translates to: HYYLSCVLPCAI*GSHCQHILPLE Trigger: CTCGAGCGGCAGTATGTGCTGGCAGTGACTGCCTCAGATGGCACAAGGCAGGACACAGCTCAGATAGTAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | ATGGTGGGCAGACACTTCTTCTTGAGGATGCCTTTGTaGGGTTGGGTAGAAGGGCCCGGAAGGGGTCCCAGA | + |
Preference number: 6 (lower is better) Translates to: MVGRHFFLRMPL*GWVEGPGRGPR Trigger: TCTGGGACCCCTTCCGGGCCCTTCTACCCAACCTCACAAAGGCATCCTCAAGAAGAAGTGTCTGCCCACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 72 bp | GTGCAGTCCATGCAGCCGAGGGCCCAGATTACCCTCTaGCTTCTGTTGCCCATAGTCAAAGGACAGAATGGC | + |
Preference number: 6 (lower is better) Translates to: VQSMQPRAQITL*LLLPIVKGQNG Trigger: GCCATTCTGTCCTTTGACTATGGGCAACAGAAGGCAGAGGGTAATCTGGGCCCTCGGCTGCATGGACTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | ACTCCCCCGACTGTAATATTGCTCAGGTGCAGTCCATaGAGCCGAGGGCCCAGATTACCCTCTGCCTTCTGT | + |
Preference number: 6 (lower is better) Translates to: TPPTVILLRCSP*SRGPRLPSAFC Trigger: ACAGAAGGCAGAGGGTAATCTGGGCCCTCGGCTGCATGGACTGCACCTGAGCAATATTACAGTCGGGGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | ATCCGTGGCGCTGATCAGCACCACTGTGGTGCCTGCTaGCCGGTCTTCATTAACGTTGACTGTGTAGTGGGA | + |
Preference number: 6 (lower is better) Translates to: IRGADQHHCGAC*PVFINVDCVVG Trigger: TCCCACTACACAGTCAACGTTAATGAAGACCGGCCAGCAGGCACCACAGTGGTGCTGATCAGCGCCACGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | GCCCACCGACAGGCTTACGTTGAGGATATGGCCGCCTaGGGCATCAGTATCCCTTTGCACATTGAAGACCAC | + |
Preference number: 6 (lower is better) Translates to: AHRQAYVEDMAA*GISIPLHIEDH Trigger: GTGGTCTTCAATGTGCAAAGGGATACTGATGCCCCAGGCGGCCATATCCTCAACGTAAGCCTGTCGGTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | ATGAAGTCGGCCATGTCGATGTGCCGGCTATCCACCTaGAGGTCCTTCATGCAGCCCACAAAGTGCCGCATT | + |
Preference number: 6 (lower is better) Translates to: MKSAMSMCRLST*RSFMQPTKCRI Trigger: AATGCGGCACTTTGTGGGCTGCATGAAGGACCTCCAGGTGGATAGCCGGCACATCGACATGGCCGACTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | CGTTGTGGCAAATGCTGCTGTCGCACACGATCTTCTTaGTGGGGCAGCCAGGCACAGTGCCATTGTTGGCAA | + |
Preference number: 6 (lower is better) Translates to: RCGKCCCRTRSS*WGSQAQCHCWQ Trigger: TTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGATCGTGTGCGACAGCAGCATTTGCCACAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | GTCCCAGTCATTGCTGCAGTAGCTGTTGGTAGGGCATaGATTCGAGTCACAGGGATCTGGCCAGCTACAGCC | + |
Preference number: 6 (lower is better) Translates to: VPVIAAVAVGRA*IRVTGIWPATA Trigger: GGCTGTAGCTGGCCAGATCCCTGTGACTCGAATCCATGCCCTACCAACAGCTACTGCAGCAATGACTGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | GCAAAGCTTGTCATATGGTTGCACTGGCAGCTGACGTaGCTCTCGTTACGGAAGACGACTTCGCAGCCTCGG | + |
Preference number: 6 (lower is better) Translates to: AKLVIWLHWQLT*LSLRKTTSQPR Trigger: CCGAGGCTGCGAAGTCGTCTTCCGTAACGAGAGCCACGTCAGCTGCCAGTGCAACCATATGACAAGCTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CAA 72 bp | AGAATCTCAAAGTTGCCCAGCACGGGCGGGTTATCATaGCGGTCAAGGAGGCGGACATGGACAGTAGCCCTG | + |
Preference number: 6 (lower is better) Translates to: RISKLPSTGGLS*RSRRRTWTVAL Trigger: CAGGGCTACTGTCCATGTCCGCCTCCTTGACCGCAATGATAACCCGCCCGTGCTGGGCAACTTTGAGATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | ATCTTCTTGGTGGGGCAGCCAGGCACAGTGCCATTGTaGGCAATGAAGTCGGCCATGTCGATGTGCCGGCTA | + |
Preference number: 6 (lower is better) Translates to: IFLVGQPGTVPL*AMKSAMSMCRL Trigger: TAGCCGGCACATCGACATGGCCGACTTCATTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | GCCGCTCTTCAAGGGGCCCACTACCACTATTCTCCTTaGTTGTGGTCCCAAAGTCTCCCAGCCAAGGGACCT | + |
Preference number: 6 (lower is better) Translates to: AALQGAHYHYSP*LWSQSLPAKGP Trigger: AGGTCCCTTGGCTGGGAGACTTTGGGACCACAACAAAGGAGAATAGTGGTAGTGGGCCCCTTGAAGAGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CAA 90 bp | AAGAGAAATTCAGAGCCAGAGGAGTCCTCATCCACCGTGCCTGCCTaGATGCTCATGGCGACAGGCATGACCCCATTCAGCTGTTCCTGC | + |
Preference number: 6 (lower is better) Translates to: KRNSEPEESSSTVPA*MLMATGMTPFSCSC Trigger: GCAGGAACAGCTGAATGGGGTCATGCCTGTCGCCATGAGCATCAAGGCAGGCACGGTGGATGAGGACTCCTCTGGCTCTGAATTTCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | GCACAGCAAAGCTTGTCATATGGTTGCACTGGCAGCTaGCGTGGCTCTCGTTACGGAAGACGACTTCGCAGC | + |
Preference number: 6 (lower is better) Translates to: AQQSLSYGCTGS*RGSRYGRRLRS Trigger: GCTGCGAAGTCGTCTTCCGTAACGAGAGCCACGTCAGCTGCCAGTGCAACCATATGACAAGCTTTGCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS GCA 72 bp | ATTGTTAATGGTGAAGGGAAAGTCGTGCCCAACCCCTaGCAGGCTATACTCGAGGCGGGCGTTATCACCAGC | + |
Preference number: 6 (lower is better) Translates to: IVNGEGKVVPNP*QAILEAGVITS Trigger: GCTGGTGATAACGCCCGCCTCGAGTATAGCCTGGCAGGGGTTGGGCACGACTTTCCCTTCACCATTAACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | AAATTCAGAGCCAGAGGAGTCCTCATCCACCGTGCCTaGCTTGATGCTCATGGCGACAGGCATGACCCCATT | + |
Preference number: 6 (lower is better) Translates to: KFRARGVLIHRA*LDAHGDRHDPI Trigger: AATGGGGTCATGCCTGTCGCCATGAGCATCAAGGCAGGCACGGTGGATGAGGACTCCTCTGGCTCTGAATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | ATGGTGACACGTAGCGAGCACTGGGCTGTCACACTGTaGACACCATCTGACACCAGCACACTCATGATGGCT | + |
Preference number: 6 (lower is better) Translates to: MVTRSEHWAVTL*TPSDTSTLMMA Trigger: AGCCATCATGAGTGTGCTGGTGTCAGATGGTGTCCACAGTGTGACAGCCCAGTGCTCGCTACGTGTCACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | CGTCCTGAGCCCGGATCCGAAGCGTATACTCTTTGGTaGTCTCATAGTCGAGTGGGCTTACCACATCCAGGG | + |
Preference number: 6 (lower is better) Translates to: RPEPGSEAYTLW*SHSRVGLPHPG Trigger: CCCTGGATGTGGTAAGCCCACTCGACTATGAGACAACCAAAGAGTATACGCTTCGGATCCGGGCTCAGGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | TCCAACTCTGCGGCCACAGAGATCCAGCCTGTGCCATaGTTAATGGTGAAGGGAAAGTCGTGCCCAACCCCT | + |
Preference number: 6 (lower is better) Translates to: SNSAATEIQPVP*LMVKGKSCPTP Trigger: AGGGGTTGGGCACGACTTTCCCTTCACCATTAACAATGGCACAGGCTGGATCTCTGTGGCCGCAGAGTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 90 bp | CATTTGAAACCTCCCACCAACAGGTTGACACAGGTACCCCCGTTCTaGCAGACACCTGGAGTACAACGGCCTGAGTGGGTACTCGCTTCA | + |
Preference number: 6 (lower is better) Translates to: HLKPPTNRLTQVPPF*QTPGVQRPEWVLAS Trigger: TGAAGCGAGTACCCACTCAGGCCGTTGTACTCCAGGTGTCTGCAAGAACGGGGGTACCTGTGTCAACCTGTTGGTGGGAGGTTTCAAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | CATCCAGATAGAACTGGCCCCGAGCATTGCCACTCATaGTGCTGTAGTGCACTAGGGCATTGCTGCCCTTGT | + |
Preference number: 6 (lower is better) Translates to: HPDRTGPEHCHS*CCSALGHCCPC Trigger: ACAAGGGCAGCAATGCCCTAGTGCACTACAGCATCATGAGTGGCAATGCTCGGGGCCAGTTCTATCTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | AGCAGAGCCCAGGAGAAGGTGCAGAGGTACAGGAAATaGAGCAGGATAGCGATGACTGTACAGGCAAAAGGG | + |
Preference number: 6 (lower is better) Translates to: SRAQEKVQRYRK*SRIAMTVQAKG Trigger: CCCTTTTGCCTGTACAGTCATCGCTATCCTGCTGCATTTCCTGTACCTCTGCACCTTCTCCTGGGCTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CCA 72 bp | ACTCAAGTCGACCCGCCTCACCCTCATCTGGATCAATaGCTCTTAAGGATGCAACAGAGGTACCAGCAGGCT | + |
Preference number: 6 (lower is better) Translates to: TQVDPPHPHLDQ*LLRMQQRYQQA Trigger: AGCCTGCTGGTACCTCTGTTGCATCCTTAAGAGCCATTGATCCAGATGAGGGTGAGGCGGGTCGACTTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | CACCGTCCTGAGCCCGGATCCGAAGCGTATACTCTTTaGTTGTCTCATAGTCGAGTGGGCTTACCACATCCA | + |
Preference number: 6 (lower is better) Translates to: HRPEPGSEAYTL*LSHSRVGLPHP Trigger: TGGATGTGGTAAGCCCACTCGACTATGAGACAACCAAAGAGTATACGCTTCGGATCCGGGCTCAGGACGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | CCGTGGGGTGTATTGGGTTTTCGGGTACACACGGACTaGTGCTCGCATGGGTTCAGGTCACACACATTTGTA | + |
Preference number: 6 (lower is better) Translates to: PWGVLGFRVHTD*CSHGFRSHTFV Trigger: TACAAATGTGTGTGACCTGAACCCATGCGAGCACCAGTCCGTGTGTACCCGAAAACCCAATACACCCCACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | TTGGTAAACACTCGCAGATGTAGCCGTGGGGTGTATTaGGTTTTCGGGTACACACGGACTGGTGCTCGCATG | + |
Preference number: 6 (lower is better) Translates to: LVNTRRCSRGVY*VFGYTRTGARM Trigger: CATGCGAGCACCAGTCCGTGTGTACCCGAAAACCCAATACACCCCACGGCTACATCTGCGAGTGTTTACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | AAGGGTTTCTCAAAGTCCCCGGAGGGGCAGTCACATTaGAAACCTCCCACCAACAGGTTGACACAGGTACCC | + |
Preference number: 6 (lower is better) Translates to: KGFSKSPEGQSH*KPPTNRLTQVP Trigger: GGGTACCTGTGTCAACCTGTTGGTGGGAGGTTTCAAATGTGACTGCCCCTCCGGGGACTTTGAGAAACCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 90 bp | TTGTTAAAGAGAATCTCAAAGTTGCCCAGCACGGGCGGGTTATCATaGCGGTCAAGGAGGCGGACATGGACAGTAGCCCTGCTCACCAAG | + |
Preference number: 6 (lower is better) Translates to: LLKRISKLPSTGGLS*RSRRRTWTVALLTK Trigger: CTTGGTGAGCAGGGCTACTGTCCATGTCCGCCTCCTTGACCGCAATGATAACCCGCCCGTGCTGGGCAACTTTGAGATTCTCTTTAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS GCA 72 bp | TGGGGTGTATTGGGTTTTCGGGTACACACGGACTGGTaGTCGCATGGGTTCAGGTCACACACATTTGTACAG | + |
Preference number: 6 (lower is better) Translates to: WGVLGFRVHTDW*SHGFRSHTFVQ Trigger: CTGTACAAATGTGTGTGACCTGAACCCATGCGAGCACCAGTCCGTGTGTACCCGAAAACCCAATACACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | AGAAATGATTGGAGCGGCTATCAAAGAGGGCATCCATaGTGTACTCAAGTCGACCCGCCTCACCCTCATCTG | + |
Preference number: 6 (lower is better) Translates to: RNDWSGYQRGHP*CTQVDPPHPHL Trigger: CAGATGAGGGTGAGGCGGGTCGACTTGAGTACACCATGGATGCCCTCTTTGATAGCCGCTCCAATCATTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | ATCCAGCTCCTCAGCTGTGGTGACAACACCGGTGATTaGGTCCAAGGAGAAGAAATGATTGGAGCGGCTATC | + |
Preference number: 6 (lower is better) Translates to: IQLLSCGDNTGD*VQGEEMIGAAI Trigger: GATAGCCGCTCCAATCATTTCTTCTCCTTGGACCCAATCACCGGTGTTGTCACCACAGCTGAGGAGCTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 90 bp | CGATGTCGACTCTACAATAAAGTCACCGTCCCCATCATCTCCTCCTaGGAAGGTGTAGAAAACCCTGCCATTCAGACCGGAGTCTCGATC | + |
Preference number: 6 (lower is better) Translates to: RCRLYNKVTVPIISS*EGVENPAIQTGVSI Trigger: GATCGAGACTCCGGTCTGAATGGCAGGGTTTTCTACACCTTCCAAGGAGGAGATGATGGGGACGGTGACTTTATTGTAGAGTCGACATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 90 bp | TCTCGTCGTGACATATCCATAAGCACAGCAAAGCTTGTCATATGGTaGCACTGGCAGCTGACGTGGCTCTCGTTACGGAAGACGACTTCG | + |
Preference number: 6 (lower is better) Translates to: SRRDISISTAKLVIW*HWQLTWLSLRKTTS Trigger: CGAAGTCGTCTTCCGTAACGAGAGCCACGTCAGCTGCCAGTGCAACCATATGACAAGCTTTGCTGTGCTTATGGATATGTCACGACGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS TCA 72 bp | GTGACAACACCGGTGATTGGGTCCAAGGAGAAGAAATaGTTGGAGCGGCTATCAAAGAGGGCATCCATGGTG | + |
Preference number: 6 (lower is better) Translates to: VTTPVIGSKEKK*LERLSKRASMV Trigger: CACCATGGATGCCCTCTTTGATAGCCGCTCCAATCATTTCTTCTCCTTGGACCCAATCACCGGTGTTGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | ATTGGGTTTTCGGGTACACACGGACTGGTGCTCGCATaGGTTCAGGTCACACACATTTGTACAGTTGTCACC | + |
Preference number: 6 (lower is better) Translates to: IGFSGTHGLVLA*VQVTHICTVVT Trigger: GGTGACAACTGTACAAATGTGTGTGACCTGAACCCATGCGAGCACCAGTCCGTGTGTACCCGAAAACCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | TGGAAAGGGGTGCTGACAAAGATGGGGGCGTTATCGTaGATGTCTAGGACTTGCACTGTTACTAGGCCAGAG | + |
Preference number: 6 (lower is better) Translates to: WKGVLTKMGALS*MSRTCTVTRPE Trigger: CTCTGGCCTAGTAACAGTGCAAGTCCTAGACATCAACGATAACGCCCCCATCTTTGTCAGCACCCCTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CCA 72 bp | GTACAGGAAGACACTCATCGAAACAGCAAAGGCCACTaGTCCAGCAAAGCTCCAGATGAGGGTATCATAGAC | + |
Preference number: 6 (lower is better) Translates to: VQEDTHRNSKGH*SSKAPDEGIID Trigger: GTCTATGATACCCTCATCTGGAGCTTTGCTGGACCAGTGGCCTTTGCTGTTTCGATGAGTGTCTTCCTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CAA 72 bp | CTCTACAATAAAGTCACCGTCCCCATCATCTCCTCCTaGGAAGGTGTAGAAAACCCTGCCATTCAGACCGGA | + |
Preference number: 6 (lower is better) Translates to: LYNKVTVPIISS*EGVENPAIQTG Trigger: TCCGGTCTGAATGGCAGGGTTTTCTACACCTTCCAAGGAGGAGATGATGGGGACGGTGACTTTATTGTAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | CGGACTGGTGCTCGCATGGGTTCAGGTCACACACATTaGTACAGTTGTCACCATAGTAACCTAGAACACAGC | + |
Preference number: 6 (lower is better) Translates to: RTGARMGSGHTH*YSCHHSNLEHS Trigger: GCTGTGTTCTAGGTTACTATGGTGACAACTGTACAAATGTGTGTGACCTGAACCCATGCGAGCACCAGTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | GACATATCCATAAGCACAGCAAAGCTTGTCATATGGTaGCACTGGCAGCTGACGTGGCTCTCGTTACGGAAG | + |
Preference number: 6 (lower is better) Translates to: DISISTAKLVIW*HWQLTWLSLRK Trigger: CTTCCGTAACGAGAGCCACGTCAGCTGCCAGTGCAACCATATGACAAGCTTTGCTGTGCTTATGGATATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |
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CDS CAA 90 bp | GGCAAGGTTGGTCAATCCTGGTCTCACAATATGGCCCAAGGTAATTaGGTAAACACTCGCAGATGTAGCCGTGGGGTGTATTGGGTTTTC | + |
Preference number: 6 (lower is better) Translates to: GKVGQSWSHNMAQGN*VNTRRCSRGVYWVF Trigger: GAAAACCCAATACACCCCACGGCTACATCTGCGAGTGTTTACCAAATTACCTTGGGCCATATTGTGAGACCAGGATTGACCAACCTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 72 bp | GGTCAATCCTGGTCTCACAATATGGCCCAAGGTAATTaGGTAAACACTCGCAGATGTAGCCGTGGGGTGTAT | + |
Preference number: 6 (lower is better) Translates to: GQSWSHNMAQGN*VNTRRCSRGVY Trigger: ATACACCCCACGGCTACATCTGCGAGTGTTTACCAAATTACCTTGGGCCATATTGTGAGACCAGGATTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS CAA 90 bp | GGGTACACACGGACTGGTGCTCGCATGGGTTCAGGTCACACACATTaGTACAGTTGTCACCATAGTAACCTAGAACACAGCTACAAGAAT | + |
Preference number: 6 (lower is better) Translates to: GYTRTGARMGSGHTH*YSCHHSNLEHSYKN Trigger: ATTCTTGTAGCTGTGTTCTAGGTTACTATGGTGACAACTGTACAAATGTGTGTGACCTGAACCCATGCGAGCACCAGTCCGTGTGTACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090558.11 |
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CDS TCA 72 bp | GGTCTTCAGTGGCAAGATCTCACCGTTCTCTCGTCGTaGCATATCCATAAGCACAGCAAAGCTTGTCATATG | + |
Preference number: 6 (lower is better) Translates to: GLQWQDLTVLSS*HIHKHSKACHM Trigger: CATATGACAAGCTTTGCTGTGCTTATGGATATGTCACGACGAGAGAACGGTGAGATCTTGCCACTGAAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090558.11 ENSMUST00000147251.2 |