RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CELSR2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000068740

Ensembl transcript IDs: ENSMUST00000090558.10, ENSMUST00000090558.11, ENSMUST00000147251.2

Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAACCCAGACCTGGCACCTGTGCTGGGGGCCCCTCAGGGCCACCATaGCAGCTCTGCGCTTACCCTTCCTCCTGGGACCGCCCACACAGC +
Preference number: 1 (lower is better)
Translates to: EPRPGTCAGGPSGPP*QLCAYPSSWDRPHS
Trigger: GCTGTGTGGGCGGTCCCAGGAGGAAGGGTAAGCGCAGAGCTGGCATGGTGGCCCTGAGGGGCCCCCAGCACAGGTGCCAGGTCTGGGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR GCA 90 bp CCTGGCACCTGTGCTGGGGGCCCCTCAGGGCCACCATGCCAGCTCTaGGCTTACCCTTCCTCCTGGGACCGCCCACACAGCAAAGAAGCA +
Preference number: 1 (lower is better)
Translates to: PGTCAGGPSGPPCQL*AYPSSWDRPHSKEA
Trigger: TGCTTCTTTGCTGTGTGGGCGGTCCCAGGAGGAAGGGTAAGCGCAGAGCTGGCATGGTGGCCCTGAGGGGCCCCCAGCACAGGTGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR TCA 90 bp GGAGCTGGACTCCGCTTAGCCCAACTGCCAAGCAGAGTAGCCCGGTaGAGCTCAGAGGCAGCAGTGGGTCAGTGGCTTGGGTTAGCAAGG +
Preference number: 1 (lower is better)
Translates to: GAGLRLAQLPSRVAR*SSEAAVGQWLGLAR
Trigger: CCTTGCTAACCCAAGCCACTGACCCACTGCTGCCTCTGAGCTTCACCGGGCTACTCTGCTTGGCAGTTGGGCTAAGCGGAGTCCAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
3UTR CCA 90 bp GTCCCTCTCCTCCCAGAGGCACAGGAGATGAAACTGAAGAGAGGCTaGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAG +
Preference number: 1 (lower is better)
Translates to: VPLLPEAQEMKLKRG*DTSWVVLSSLGRGK
Trigger: CTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGTTTCATCTCCTGTGCCTCTGGGAGGAGAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR CCA 90 bp CCTCCTGGGACCGCCCACACAGCAAAGAAGCAATGGAAGAGTGACTaGCCCTACCTGCAAGGGTGGGCAGGAGAAATGAAGCACTTTGGG +
Preference number: 1 (lower is better)
Translates to: PPGTAHTAKKQWKSD*PYLQGWAGEMKHFG
Trigger: CCCAAAGTGCTTCATTTCTCCTGCCCACCCTTGCAGGTAGGGCCAGTCACTCTTCCATTGCTTCTTTGCTGTGTGGGCGGTCCCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR TCA 90 bp CCTTCCTCCTGGGACCGCCCACACAGCAAAGAAGCAATGGAAGAGTaGCTGGCCCTACCTGCAAGGGTGGGCAGGAGAAATGAAGCACTT +
Preference number: 1 (lower is better)
Translates to: PSSWDRPHSKEAMEE*LALPARVGRRNEAL
Trigger: AAGTGCTTCATTTCTCCTGCCCACCCTTGCAGGTAGGGCCAGTCACTCTTCCATTGCTTCTTTGCTGTGTGGGCGGTCCCAGGAGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR TCA 90 bp CAGGTGAGAATCCATGGCAGAAAAGCCAGCGGCCAGCCTTCCAAATaGGAGACAGGGACATCTTTCCTGCCTCCTCGAGCCTTTATTCTA +
Preference number: 1 (lower is better)
Translates to: QVRIHGRKASGQPSK*ETGTSFLPPRAFIL
Trigger: TAGAATAAAGGCTCGAGGAGGCAGGAAAGATGTCCCTGTCTCTCATTTGGAAGGCTGGCCGCTGGCTTTTCTGCCATGGATTCTCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR CCA 90 bp ATTAACTCTCTCTTCGCAGGGAGCTGGGGTCAAGTAGGGGGACAATaGGGACCAAGGACCTGGTTCTTTGAAGAAGAGAGCCAATTCCAG +
Preference number: 1 (lower is better)
Translates to: INSLFAGSWGQVGGQ*GPRTWFFEEESQFQ
Trigger: CTGGAATTGGCTCTCTTCTTCAAAGAACCAGGTCCTTGGTCCCCATTGTCCCCCTACTTGACCCCAGCTCCCTGCGAAGAGAGAGTTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR TCA 90 bp AGTGACAAGTCTGGAATACATGCTCAGAGGAGAGGGGGACTCAAATaGACGGTGGTTGCAAAAACCCGAGGAGAGCAAATGGAGCGAGAG +
Preference number: 1 (lower is better)
Translates to: SDKSGIHAQRRGGLK*TVVAKTRGEQMERE
Trigger: CTCTCGCTCCATTTGCTCTCCTCGGGTTTTTGCAACCACCGTTCATTTGAGTCCCCCTCTCCTCTGAGCATGTATTCCAGACTTGTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR GCA 90 bp TGGAATACATGCTCAGAGGAGAGGGGGACTCAAATGAACGGTGGTTaGAAAAACCCGAGGAGAGCAAATGGAGCGAGAGGAAGGATGGTA +
Preference number: 1 (lower is better)
Translates to: WNTCSEERGTQMNGG*KNPRRANGARGRMV
Trigger: TACCATCCTTCCTCTCGCTCCATTTGCTCTCCTCGGGTTTTTGCAACCACCGTTCATTTGAGTCCCCCTCTCCTCTGAGCATGTATTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR CCA 90 bp AGTCTGGAATACATGCTCAGAGGAGAGGGGGACTCAAATGAACGGTaGTTGCAAAAACCCGAGGAGAGCAAATGGAGCGAGAGGAAGGAT +
Preference number: 1 (lower is better)
Translates to: SLEYMLRGEGDSNER*LQKPEESKWSERKD
Trigger: ATCCTTCCTCTCGCTCCATTTGCTCTCCTCGGGTTTTTGCAACCACCGTTCATTTGAGTCCCCCTCTCCTCTGAGCATGTATTCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR-3UTR CCA 90 bp GTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCCGGAAGGCAGGCAGGTaGGCGGTAGGGAGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: VQGPGSSDGRFVAAASEGRKAGR*AVGSRG
Trigger: GCCCCTGCTCCCTACCGCCCACCTGCCTGCCTTCCG...GCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.10
ENSMUST00000147251.2
3UTR-3UTR CCA 90 bp TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTCGGAAGGCAGGCAGGTaGGCGGTAGGGAGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: SSDGRFVAAASEGRQVGGRKAGR*AVGSRG
Trigger: GCCCCTGCTCCCTACCGCCCACCTGCCTGCCTTCCG...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.10
ENSMUST00000147251.2
3UTR-3UTR CCA 90 bp CAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCAGTGAGGGGGAGGTaGGGGAGGGACTTGGCACTA +
Preference number: 2 (lower is better)
Translates to: QAPQMDGSSLLLRKAGRWAVRGR*GRDLAL
Trigger: TAGTGCCAAGTCCCTCCCCCACCTCCCCCTCACTGC...CCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.10
ENSMUST00000147251.2
3UTR-3UTR GCA 90 bp TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGTTGGCCTTCTGGGTaGAAGGCCCAGGCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: SSDGRFVAAASEGRQVGGSWPSG*KAQAPQ
Trigger: CTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACT...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.10
ENSMUST00000147251.2
3UTR-3UTR CCA 90 bp TGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCACCCAGGCTCCTCAGATaGACGGTTCGTCGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: CKAQAPQMDGSSLLLRKAPRLLR*TVRRCC
Trigger: GCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGG...TGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.10
ENSMUST00000147251.2
3UTR-3UTR CCA 90 bp GATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGAGGGACTTGGCACTAGTTaGCCTTCTGGGTGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: DGRFVAAASEGRQVGGREGLGTS*PSGCKA
Trigger: GGCCTTGCACCCAGAAGGCCAACTAGTGCCAAGTCC...CTCCCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.10
ENSMUST00000147251.2
3UTR-3UTR GCA 90 bp CCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTAGTTGGCCTTCTGGGTaGAAGGCCCAGGCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: PGWSCPLWEGERGVHFRRSWPSG*KAQAPQ
Trigger: CTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACT...ACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.10
ENSMUST00000147251.2
3UTR-3UTR CCA 90 bp ACTGAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGCCCAGGCTCCTCAGATaGACGGTTCGTCGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: TEERLGHVLGGPVLFGKGPRLLR*TVRRCC
Trigger: GCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGG...CCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.10
ENSMUST00000147251.2
3UTR-3UTR CCA 90 bp AGGGACTTGGCACTAGTTGGCCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGGCAGTGAGGGGGAGGTaGGGGAGGGACTTGGCACTA +
Preference number: 2 (lower is better)
Translates to: RDLALVGLLGARPRLLRWAVRGR*GRDLAL
Trigger: TAGTGCCAAGTCCCTCCCCCACCTCCCCCTCACTGC...CCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACTAGTGCCAAGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.10
ENSMUST00000147251.2
3UTR-3UTR CCA 90 bp TCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGCAGCAGTGGGTCAGTaGCTTGGGTTAGCAAGGACC +
Preference number: 2 (lower is better)
Translates to: SDGRFVAAASEGRQVGGRAAVGQ*LGLART
Trigger: GGTCCTTGCTAACCCAAGCCACTGACCCACTGCTGC...CCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
3UTR-3UTR CCA 90 bp GCGAGAGGAAGGATGGTAGGCCCCAAATCCAGGGCTGCCAGGGACTCACCCAGCCTGGGCTGTAGCACATaGCCAGAGTCCAGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: ARGRMVGPKSRAARDSPSLGCST*PESRKR
Trigger: CCTTTTCCTGGACTCTGGCCATGTGCTACAGCCCAG...GCTGGGTGAGTCCCTGGCAGCCCTGGATTTGGGGCCTACCATCCTTCCTCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR-3UTR CCA 90 bp CCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTGAGCACCATGTTGTCTaGGCGCACAAGGGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: PSGCKAQAPQMDGSSLLLEHHVV*AHKGAG
Trigger: TCCAGCTCCCTTGTGCGCCCAGACAACATGGTGCTC...AAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
3UTR-3UTR CCA 90 bp TGCAAAAACCCGAGGAGAGCAAATGGAGCGAGAGGAAGGATGGTAGGCCCCAAAAGCAGAACCCAGACCTaGCACCTGTGCTGGGGGCCC +
Preference number: 2 (lower is better)
Translates to: CKNPRRANGARGRMVGPKSRTQT*HLCWGP
Trigger: GGGCCCCCAGCACAGGTGCCAGGTCTGGGTTCTGCT...TTTGGGGCCTACCATCCTTCCTCTCGCTCCATTTGCTCTCCTCGGGTTTTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR-3UTR TCA 90 bp TGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCACAACAGAGGGGACAGTaGACAGCTTCCACCAGAAAA +
Preference number: 2 (lower is better)
Translates to: CKAQAPQMDGSSLLLRKAQQRGQ*TASTRK
Trigger: TTTTCTGGTGGAAGCTGTTCACTGTCCCCTCTGTTG...TGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
3UTR-3UTR CCA 90 bp GAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAAGTGGGTCAGTGGCTTaGGTTAGCAAGGACCTCAGG +
Preference number: 2 (lower is better)
Translates to: EERLGHVLGGPVLFGKGKSGSVA*VSKDLR
Trigger: CCTGAGGTCCTTGCTAACCCAAGCCACTGACCCACT...TTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
3UTR-3UTR CCA 90 bp TCTGCGCTTACCCTTCCTCCTGGGACCGCCCACACAGCAAAGAAGCAATGGAAGCCCTACCTGCAAGGGTaGGCAGGAGAAATGAAGCAC +
Preference number: 2 (lower is better)
Translates to: SALTLPPGTAHTAKKQWKPYLQG*AGEMKH
Trigger: GTGCTTCATTTCTCCTGCCCACCCTTGCAGGTAGGG...CTTCCATTGCTTCTTTGCTGTGTGGGCGGTCCCAGGAGGAAGGGTAAGCGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR-3UTR TCA 90 bp CCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTAACAAAAGTAATCCCTaGAGTCATGAAGAGTGGAGA +
Preference number: 2 (lower is better)
Translates to: PSGCKAQAPQMDGSSLLLNKSNP*SHEEWR
Trigger: TCTCCACTCTTCATGACTTCAGGGATTACTTTTGTT...AAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.10
ENSMUST00000147251.2
3UTR-3UTR CCA 90 bp AGACAGGGACATCTTTCCTGCCTCCTCGAGCCTTTATTCTACACCTGCTCTAGAGGGACACGTCCTGGGTaGTCCTGTCCTCTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: RQGHLSCLLEPLFYTCSRGTRPG*SCPLWE
Trigger: TTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCC...TCTAGAGCAGGTGTAGAATAAAGGCTCGAGGAGGCAGGAAAGATGTCCCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR-3UTR CCA 90 bp AGACAGGGACATCTTTCCTGCCTCCTCGAGCCTTTATTCTACACCTGCTCTAGAGGCATTTGTCTGATTTaGCGGGGAGGGGGTGAGTGG +
Preference number: 2 (lower is better)
Translates to: RQGHLSCLLEPLFYTCSRGICLI*RGGGEW
Trigger: CCACTCACCCCCTCCCCGCCAAATCAGACAAATGCC...TCTAGAGCAGGTGTAGAATAAAGGCTCGAGGAGGCAGGAAAGATGTCCCTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR CAA 90 bp CTGGAATACATGCTCAGAGGAGAGGGGGACTCAAATGAACGGTGGTaGCAAAAACCCGAGGAGAGCAAATGGAGCGAGAGGAAGGATGGT +
Preference number: 2 (lower is better)
Translates to: LEYMLRGEGDSNERW*QKPEESKWSERKDG
Trigger: ACCATCCTTCCTCTCGCTCCATTTGCTCTCCTCGGGTTTTTGCAACCACCGTTCATTTGAGTCCCCCTCTCCTCTGAGCATGTATTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR-3UTR TCA 90 bp GCCTGCAATGGGCACATGAGACCCCCTGGGGACCAGACACAAACCCATCCCAACAACAAAAGTAATCCCTaGAGTCATGAAGAGTGGAGA +
Preference number: 2 (lower is better)
Translates to: ACNGHMRPPGDQTQTHPNNKSNP*SHEEWR
Trigger: TCTCCACTCTTCATGACTTCAGGGATTACTTTTGTT...GTTGGGATGGGTTTGTGTCTGGTCCCCAGGGGGTCTCATGTGCCCATTGCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR-3UTR TCA 90 bp GAAGAAGAGAGCCAATTCCAGGAAGGGGTTAAAAATAGAACATGTCTCAGAGGCTTTGGTGATGGCAAATaGGGGGCAGGCCCCCTAAGA +
Preference number: 2 (lower is better)
Translates to: EEESQFQEGVKNRTCLRGFGDGK*GAGPLR
Trigger: TCTTAGGGGGCCTGCCCCTCATTTGCCATCACCAAA...GCCTCTGAGACATGTTCTATTTTTAACCCCTTCCTGGAATTGGCTCTCTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR GCA 72 bp CCTGGCACCTGTGCTGGGGGCCCCTCAGGGCCACCATaGCAGCTCTGCGCTTACCCTTCCTCCTGGGACCGC +
Preference number: 3 (lower is better)
Translates to: PGTCAGGPSGPP*QLCAYPSSWDR
Trigger: GCGGTCCCAGGAGGAAGGGTAAGCGCAGAGCTGGCATGGTGGCCCTGAGGGGCCCCCAGCACAGGTGCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR GCA 72 bp CCTCACCAACTGAGGCCTGTCTGTCCGTCTGTCCGGTaGAGCCTTGCAGGGGCTCCTGCCCCTGGTGCACGT +
Preference number: 3 (lower is better)
Translates to: PHQLRPVCPSVR*SLAGAPAPGAR
Trigger: ACGTGCACCAGGGGCAGGAGCCCCTGCAAGGCTGCACCGGACAGACGGACAGACAGGCCTCAGTTGGTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR GCA 72 bp ACTGAGGCCTGTCTGTCCGTCTGTCCGGTGCAGCCTTaGAGGGGCTCCTGCCCCTGGTGCACGTGGCTTTGT +
Preference number: 3 (lower is better)
Translates to: TEACLSVCPVQP*RGSCPWCTWLC
Trigger: ACAAAGCCACGTGCACCAGGGGCAGGAGCCCCTGCAAGGCTGCACCGGACAGACGGACAGACAGGCCTCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR CCA 72 bp AGTGAGGGGGAGGTGGGGGAGGGACTTGGCACTAGTTaGCCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATG +
Preference number: 3 (lower is better)
Translates to: SEGEVGEGLGTS*PSGCKAQAPQM
Trigger: CATCTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACTAGTGCCAAGTCCCTCCCCCACCTCCCCCTCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.10
ENSMUST00000147251.2
3UTR CCA 72 bp CCTTCTGCCCCTGGCCGGACAGGGCTTGTCAGTTCCTaGGAGAGGTGGAACTGGCGGGTGGAAAGTGCCTTT +
Preference number: 3 (lower is better)
Translates to: PSAPGRTGLVSS*ERWNWRVESAF
Trigger: AAAGGCACTTTCCACCCGCCAGTTCCACCTCTCCCAGGAACTGACAAGCCCTGTCCGGCCAGGGGCAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR CCA 72 bp GGGCCACCATGCCAGCTCTGCGCTTACCCTTCCTCCTaGGACCGCCCACACAGCAAAGAAGCAATGGAAGAG +
Preference number: 3 (lower is better)
Translates to: GPPCQLCAYPSS*DRPHSKEAMEE
Trigger: CTCTTCCATTGCTTCTTTGCTGTGTGGGCGGTCCCAGGAGGAAGGGTAAGCGCAGAGCTGGCATGGTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR-3UTR CAA 90 bp ACTGAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGGTGGTCCTGTCCTCTTaGGGAAGGGGAAAGGGGAGT +
Preference number: 3 (lower is better)
Translates to: TEERLGHVLGGPVLFGKGVVLSS*GRGKGS
Trigger: ACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCAC...CCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.10
ENSMUST00000147251.2
3UTR TCA 72 bp TGGGACCGCCCACACAGCAAAGAAGCAATGGAAGAGTaGCTGGCCCTACCTGCAAGGGTGGGCAGGAGAAAT +
Preference number: 3 (lower is better)
Translates to: WDRPHSKEAMEE*LALPARVGRRN
Trigger: ATTTCTCCTGCCCACCCTTGCAGGTAGGGCCAGTCACTCTTCCATTGCTTCTTTGCTGTGTGGGCGGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR CCA 72 bp CTCTTCGCAGGGAGCTGGGGTCAAGTAGGGGGACAATaGGGACCAAGGACCTGGTTCTTTGAAGAAGAGAGC +
Preference number: 3 (lower is better)
Translates to: LFAGSWGQVGGQ*GPRTWFFEEES
Trigger: GCTCTCTTCTTCAAAGAACCAGGTCCTTGGTCCCCATTGTCCCCCTACTTGACCCCAGCTCCCTGCGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR-3UTR CAA 90 bp TGCAAAAACCCGAGGAGAGCAAATGGAGCGAGAGGAAGGATGGTAGGCCCCAAAGTGGTCCTGTCCTCTTaGGGAAGGGGAAAGGGGAGT +
Preference number: 3 (lower is better)
Translates to: CKNPRRANGARGRMVGPKVVLSS*GRGKGS
Trigger: ACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCAC...TTTGGGGCCTACCATCCTTCCTCTCGCTCCATTTGCTCTCCTCGGGTTTTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR-3UTR CAA 90 bp GAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAACTGGTGCACGTGGCTTaGTCCTTTCCTTTTGGTGAT +
Preference number: 3 (lower is better)
Translates to: EERLGHVLGGPVLFGKGKLVHVA*SFPFGD
Trigger: ATCACCAAAAGGAAAGGACAAAGCCACGTGCACCAG...TTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR CCA 72 bp ACCGCCCACACAGCAAAGAAGCAATGGAAGAGTGACTaGCCCTACCTGCAAGGGTGGGCAGGAGAAATGAAG +
Preference number: 3 (lower is better)
Translates to: TAHTAKKQWKSD*PYLQGWAGEMK
Trigger: CTTCATTTCTCCTGCCCACCCTTGCAGGTAGGGCCAGTCACTCTTCCATTGCTTCTTTGCTGTGTGGGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR CCA 72 bp AATGAACGGTGGTTGCAAAAACCCGAGGAGAGCAAATaGAGCGAGAGGAAGGATGGTAGGCCCCAAATCCAG +
Preference number: 3 (lower is better)
Translates to: NERWLQKPEESK*SERKDGRPQIQ
Trigger: CTGGATTTGGGGCCTACCATCCTTCCTCTCGCTCCATTTGCTCTCCTCGGGTTTTTGCAACCACCGTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR TCA 72 bp TCTGGAATACATGCTCAGAGGAGAGGGGGACTCAAATaGACGGTGGTTGCAAAAACCCGAGGAGAGCAAATG +
Preference number: 3 (lower is better)
Translates to: SGIHAQRRGGLK*TVVAKTRGEQM
Trigger: CATTTGCTCTCCTCGGGTTTTTGCAACCACCGTTCATTTGAGTCCCCCTCTCCTCTGAGCATGTATTCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
3UTR-3UTR CAA 90 bp AGACAGGGACATCTTTCCTGCCTCCTCGAGCCTTTATTCTACACCTGCTCTAGACTTTGTCCTTTCCTTTaGGTGATGGCAAATGAGGGG +
Preference number: 3 (lower is better)
Translates to: RQGHLSCLLEPLFYTCSRLCPFL*VMANEG
Trigger: CCCCTCATTTGCCATCACCAAAAGGAAAGGACAAAG...TCTAGAGCAGGTGTAGAATAAAGGCTCGAGGAGGCAGGAAAGATGTCCCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.10
CDS-3UTR GCA 90 bp GCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGAGGCTGTCCCAGCCCTaGTCGCCAGGGAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: APQMDGSSLLLRKAGRWARLSQP*SPGKAA
Trigger: GGCCGCCTTCCCTGGCGAGCAGGGCTGGGACAGCCT...CGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR GCA 90 bp CCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTTCTGGGTGCCTCCGCTaGCGCCGGGCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSGCKAQAPQMDGSSLLLSGCLR*RRASSS
Trigger: GGAGGAGCTGGCCCGGCGGCAGCGGAGGCACCCAGA...AAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp CAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGCGTCGGATGCCGTGCTaGTTGGAGCGGAGGGCACGG +
Preference number: 4 (lower is better)
Translates to: QAPQMDGSSLLLRKAGRWRRMPC*LERRAR
Trigger: CCGTGCCCTCCGCTCCAACCAGCACGGCATCCGACG...CCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGCAGGGTCGGGACTaGGCTTCCGGCTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: SSDGRFVAAASEGRQVGGRQGRD*ASGCRR
Trigger: TCGCCTGCAGCCGGAAGCCCAGTCCCGACCCTGCCT...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTCGCTGGGCACTCTCATaGGCCAAGAGCCGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSDGRFVAAASEGRQVGGRWALS*AKSRVA
Trigger: GGCCACACGGCTCTTGGCTCATGAGAGTGCCCAGCG...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp CCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTGGCCCAGGGCAGCTGTaGGGTTGCGTCGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: PSGCKAQAPQMDGSSLLLGPGQL*GCVGCR
Trigger: ACGGCATCCGACGCAACCTCACAGCTGCCCTGGGCC...AAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp CCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGCGTCGCGCACCTCTGTaGGCGCGCGGTACAGGTGTA +
Preference number: 4 (lower is better)
Translates to: PGSSDGRFVAAASEGRQVRRAPL*ARGTGV
Trigger: TACACCTGTACCGCGCGCTCACAGAGGTGCGCGACG...CACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR GCA 90 bp GGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCCGAGAAGACCCTGTaGCCTGCTCCAGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GWDTSWVVLSSLGRGKGSPEKTL*PAPGAA
Trigger: GGCTGCCCCTGGAGCAGGGCACAGGGTCTTCTCGGG...ACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp GTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCGGATGCCGTGCTGGTTaGAGCGGAGGGCACGGAGGA +
Preference number: 4 (lower is better)
Translates to: VQGPGSSDGRFVAAASEGGCRAG*SGGHGG
Trigger: TCCTCCGTGCCCTCCGCTCCAACCAGCACGGCATCC...GCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp CAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCCACTGCCTCTCCCTaGCTCAGTTCTGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: QAPQMDGSSLLLRKAGRWATASP*LSSGCL
Trigger: GAGGCACCCAGAACTGAGTCAGGGAGAGGCAGTGGC...CCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp ATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGAGCTCAGGGCAGCCAAGGTaGCTCCAAGGGCCACGTATG +
Preference number: 4 (lower is better)
Translates to: MDGSSLLLRKAGRWAVGSSGQPR*LQGPRM
Trigger: CATACGTGGCCCTTGGAGTCACCTTGGCTGCCCTGA...GCTCCCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR GCA 90 bp GGGGAGGGACTTGGCACTAGTTGGCCTTCTGGGTGCAAGGCCCAGGCTCCTCAGGTACAGCCTCCCGTCTaGGTAGGGGCTGGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: GEGLGTSWPSGCKAQAPQVQPPV*VGAGAV
Trigger: AACTGCCCCAGCCCCTACGCAGACGGGAGGCTGTAC...CTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACTAGTGCCAAGTCCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR GCA 90 bp TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGCTGGGCTGACTCTTaGCGGAGCGGCTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: SSDGRFVAAASEGRQVGGSWADS*RSGWHC
Trigger: ACAGTGCCAGCCGCTCCGGCAAGAGTCAGCCCAGCT...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp TCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGCAGAGGTGTGCTGGGTaGCATTGCGCAGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SDGRFVAAASEGRQVGGRQRCAG*HCAGAG
Trigger: CCCTGCTCCTGCGCAATGCCACCCAGCACACCTCTG...CCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR GCA 90 bp GCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTGCCACCCTCTGTCTaGTGGATCAGTTCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: APQMDGSSLLLRKAGRWAVPPSV*WISSQC
Trigger: GCACTGGGAACTGATCCAGCAGACAGAGGGTGGCAC...CGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGCTCCTCCGTCTCCTaGGCTTCACCAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SSDGRFVAAASEGRQVGGSSSVS*ASPGPA
Trigger: TGCAGGACCTGGTGAAGCCCAGGAGACGGAGGAGCT...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp GCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGTCCAGAAGACACAGATaGGCTTGGTCCGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: APQMDGSSLLLRKAGRWASRRHR*AWSAPR
Trigger: CCGAGGAGCGGACCAAGCCCATCTGTGTCTTCTGGA...CGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp ATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGAGCCACTGGCAGCTGACGTaGCTCTCGTTACGGAAGACG +
Preference number: 4 (lower is better)
Translates to: MDGSSLLLRKAGRWAVGSHWQLT*LSLRKT
Trigger: CGTCTTCCGTAACGAGAGCCACGTCAGCTGCCAGTG...GCTCCCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp ATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGAGCTTGAGGATGCCTTTGTaGGGTTGGGTAGAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: MDGSSLLLRKAGRWAVGSLRMPL*GWVEGP
Trigger: GGGCCCTTCTACCCAACCTCACAAAGGCATCCTCAA...GCTCCCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp ACTGAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGCCACCGTGCCTGCCTTaGTGCTCATGGCGACAGGCA +
Preference number: 4 (lower is better)
Translates to: TEERLGHVLGGPVLFGKGPPCLP*CSWRQA
Trigger: TGCCTGTCGCCATGAGCATCAAGGCAGGCACGGTGG...CCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR GCA 90 bp CAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGTTCTTCTCGAAGCCCTaGCGTTGGGCAGCACAGGAG +
Preference number: 4 (lower is better)
Translates to: QAPQMDGSSLLLRKAGRWFFSKP*RWAAQE
Trigger: CTCCTGTGCTGCCCAACGGCAGGGCTTCGAGAAGAA...CCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR GCA 90 bp AGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGAAGACCCTGTGCCCTaGTCCAGGGGCAGCCTTAGG +
Preference number: 4 (lower is better)
Translates to: REAGTRPGWSCPLWEGEREDPVP*SRGSLR
Trigger: CCTAAGGCTGCCCCTGGAGCAGGGCACAGGGTCTTC...CCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR GCA 90 bp TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTCTCATCCACCGTGCCTaGCTTGATGCTCATGGCGAC +
Preference number: 4 (lower is better)
Translates to: SSDGRFVAAASEGRQVGGLIHRA*LDAHGD
Trigger: GTCGCCATGAGCATCAAGGCAGGCACGGTGGATGAG...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp GGGGAGGGACTTGGCACTAGTTGGCCTTCTGGGTGCAAGGCCCAGGCTCCTCAGGCAGTTGAAGAGGTTTaGGGGGAGCCAACCCCTGTG +
Preference number: 4 (lower is better)
Translates to: GEGLGTSWPSGCKAQAPQAVEEV*GEPTPV
Trigger: CACAGGGGTTGGCTCCCCCCAAACCTCTTCAACTGC...CTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACTAGTGCCAAGTCCCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp TCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGCCACCCTCTGTCTGCTaGATCAGTTCCCAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SDGRFVAAASEGRQVGGRPPSVC*ISSQCL
Trigger: GAGGCACTGGGAACTGATCCAGCAGACAGAGGGTGG...CCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp CCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGTCTGGGCAAGGGCGCTaGCGTAAGCCTCATAGTGCT +
Preference number: 4 (lower is better)
Translates to: PGSSDGRFVAAASEGRQVSGQGR*RKPHSA
Trigger: AGCACTATGAGGCTTACGCCAGCGCCCTTGCCCAGA...CACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp AGGGACTTGGCACTAGTTGGCCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGGTGCCAGCAGCCACGTaGCACTCAGCAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RDLALVGLLGARPRLLRWVPAAT*HSAAGG
Trigger: TCCTCCTGCTGCTGAGTGCCACGTGGCTGCTGGCAC...CCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACTAGTGCCAAGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp TGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAATCTCCATTCTCCCGTaGCCGCTCTTCAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CKAQAPQMDGSSLLLRKAISILP*PLFKGP
Trigger: GGGCCCCTTGAAGAGCGGCCACGGGAGAATGGAGAT...TGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp CCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTGCTGGTAGGCCACCTTaGCATCACTGCCGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: PSGCKAQAPQMDGSSLLLAGRPP*HHCRSS
Trigger: GCTACTTCGGCAGTGATGTCAAGGTGGCCTACCAGC...AAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp AGAGTGGCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGGCCGGAACTGCACGGTaGCTGGCTTGTCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: RVAEKADRGLAGATEGTVAGTAR*LACPEP
Trigger: GGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGC...CACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGCCACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp CCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTGGAGGTCAGCCTGGTTaGTGCCCAGGAGAAAGACCA +
Preference number: 4 (lower is better)
Translates to: PGWSCPLWEGERGVHFRRGGQPG*CPGERP
Trigger: TGGTCTTTCTCCTGGGCATCAACCAGGCTGACCTCC...ACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp TGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTATAAAAGCAGCAGGAGGACCGTaGAGGAGGAGCGCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: WSCPLWEGERGVHFRRIKAAGGP*RRSAGP
Trigger: CGGGCCTGCGCTCCTCCTTCACGGTCCTCCTGCTGC...TTTTATACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp AGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGTCCGGACCTCCTTGCTaGGCACCACGTAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: REAGTRPGWSCPLWEGERSGPPC*APRRRG
Trigger: TCCTCTCCTACGTGGTGCTCAGCAAGGAGGTCCGGA...CCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp GTGGCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACGCCGACTGCCCTCACTaGTGGAGGAGCCCCGAGAAG +
Preference number: 4 (lower is better)
Translates to: VAEKADRGLAGATEGTVNADCPH*WRSPEK
Trigger: CTTCTCGGGGCTCCTCCATCAGTGAGGGCAGTCGGC...GTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR GCA 90 bp CCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTGTTGACAGAGAGCAGTaGCAGCAGCCACGTGGCACT +
Preference number: 4 (lower is better)
Translates to: PGWSCPLWEGERGVHFRRVDREQ*QQPRGT
Trigger: AGTGCCACGTGGCTGCTGGCACTGCTCTCTGTCAAC...ACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp TCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGTGTACATCCTGTGTaGCGGATAGCCCAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: SSDGRFVAAASEGRQVGGSVHPV*RIAQSP
Trigger: GGGGCTTTGGGCTATCCGCCACACAGGATGTACACT...ACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp GCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGCATAACGGGGCAGCTTaGTCCCAGCAAAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: ARPRLLRWTVRRCCFGRQHNGAA*SQQSSP
Trigger: AGGGGAACTTTGCTGGGACCAAGCTGCCCCGTTATG...CTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp AGAGTGGCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGTCCCTGACTCAGTTCTaGGTGCCTCCGCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RVAEKADRGLAGATEGTVSLTQF*VPPLPP
Trigger: CGGCGGCAGCGGAGGCACCCAGAACTGAGTCAGGGA...CACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGCCACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp ACTGAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGCGTCTGCGTAGGGGCTaGGGCAGTTATAGGACGAGG +
Preference number: 4 (lower is better)
Translates to: TEERLGHVLGGPVLFGKGRLRRG*GSYRTR
Trigger: CCTCGTCCTATAACTGCCCCAGCCCCTACGCAGACG...CCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp GGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTAGTTCCTCGTCGTCGTaGACGCTGATGCTCACCACA +
Preference number: 4 (lower is better)
Translates to: GWDTSWVVLSSLGRGKGSSSSSS*TLMLTT
Trigger: TGTGGTGAGCATCAGCGTTCACGACGACGAGGAACT...ACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp CCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTGGCTGCTCTTTTCGCTaGTGGTGGGCAGACACTTCT +
Preference number: 4 (lower is better)
Translates to: PGWSCPLWEGERGVHFRRGCSFR*WWADTS
Trigger: AGAAGTGTCTGCCCACCATCAGCGAAAAGAGCAGCC...ACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR GCA 90 bp GCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACAGCTGTGCTGGGTGGCATTaGGCAGGAGCAGGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: AEKADRGLAGATEGTVNSCAGWH*AGAGLA
Trigger: GGCTAGCCCTGCTCCTGCGCAATGCCACCCAGCACA...GCTGTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR GCA 90 bp CAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGTGGATCAGTTCCCAGTaGCTCTTGTTGGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: QAPQMDGSSLLLRKAGRWWISSQ*LLLAAS
Trigger: GGATGCAGCCAACAAGAGGCACTGGGAACTGATCCA...CCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACAGCGAGCCAAGAGCCGTGTaGCCAGCTGGTAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: AEKADRGLAGATEGTVNSEPRAV*PAGRPP
Trigger: AGGTGGCCTACCAGCTGGCCACACGGCTCTTGGCTC...GCTGTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp GCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACAGCCCCAGTGCCTCTTGTTaGCTGCATCCAGGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: AEKADRGLAGATEGTVNSPSASC*LHPGGR
Trigger: GCGCCCTCCTGGATGCAGCCAACAAGAGGCACTGGG...GCTGTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp ACTGAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAGAAGGGGATGTAGCTaGGCTGACTCTTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: TEERLGHVLGGPVLFGKGRRGCS*ADSCRS
Trigger: GCTCCGGCAAGAGTCAGCCCAGCTACATCCCCTTCT...CCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp GAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGCCAGGGTTCAGCGTaGACTCCTCCCTCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: EERLGHVLGGPVLFGKGKGQGSA*TPPSAR
Trigger: TCTTGCTGAGGGAGGAGTCCACGCTGAACCCTGGCC...TTTCCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACAGCGGTTGCACTGGCAGCTaGCGTGGCTCTCGTTACGGA +
Preference number: 4 (lower is better)
Translates to: AEKADRGLAGATEGTVNSGCTGS*RGSRYG
Trigger: TCCGTAACGAGAGCCACGTCAGCTGCCAGTGCAACC...GCTGTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp ATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGAGCGCAGACACTTCTTCTTaGGGATGCCTTTGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: MDGSSLLLRKAGRWAVGSADTSS*GCLCEV
Trigger: AACCTCACAAAGGCATCCTCAAGAAGAAGTGTCTGC...GCTCCCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp CCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGCAAAGCTTGTCATATaGTTGCACTGGCAGCTGACG +
Preference number: 4 (lower is better)
Translates to: PGSSDGRFVAAASEGRQVAKLVI*LHWQLT
Trigger: CGTCAGCTGCCAGTGCAACCATATGACAAGCTTTGC...CACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp GTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTATAAAGGCTGCAGGCGAACTTaGGTGCTTTCCGGACCTCCT +
Preference number: 4 (lower is better)
Translates to: VVLSSLGRGKGSPLPAYKGCRRT*VLSGPP
Trigger: AGGAGGTCCGGAAAGCACTCAAGTTCGCCTGCAGCC...TTTATACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp GTGGCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACTCCTTGGGGGTACTGTaGAGGGGCAGTCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VAEKADRGLAGATEGTVNSLGVL*RGSLSA
Trigger: AGCTGAGAGACTGCCCCTTCACAGTACCCCCAAGGA...GTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp TGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAAACAGCAAAGGCCACTaGTCCAGCAAAGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: CKAQAPQMDGSSLLLRKANSKGH*SSKAPD
Trigger: ATCTGGAGCTTTGCTGGACCAGTGGCCTTTGCTGTT...TGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp GTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCCAGATTCTGGCAAAATaGCTGTGGTCTCAAGATCTG +
Preference number: 4 (lower is better)
Translates to: VQGPGSSDGRFVAAASEGQILAK*LWSQDL
Trigger: CAGATCTTGAGACCACAGTCATTTTGCCAGAATCTG...GCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp GCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACAGCGCAGAGTGTCACTGTTaGCAGAGAGCAGTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: AEKADRGLAGATEGTVNSAECHC*QRAVPA
Trigger: TGCTGGCACTGCTCTCTGTCAACAGTGACACTCTGC...GCTGTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR GCA 90 bp CCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTCAGAGGTACAGGAAATaGAGCAGGATAGCGATGACT +
Preference number: 4 (lower is better)
Translates to: PGWSCPLWEGERGVHFRRQRYRK*SRIAMT
Trigger: AGTCATCGCTATCCTGCTGCATTTCCTGTACCTCTG...ACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCACCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp GTGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTATAAAAGACACAGATGGGCTTaGTCCGCTCCTCGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VVLSSLGRGKGSPLPAYKRHRWA*SAPRSP
Trigger: TGGAGACCGAGGAGCGGACCAAGCCCATCTGTGTCT...TTTATACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp GTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCTCTGAAGACAGATTCTaGCAAAATGACTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: VQGPGSSDGRFVAAASEGSEDRF*QNDCGL
Trigger: GAGACCACAGTCATTTTGCCAGAATCTGTCTTCAGA...GCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR TCA 90 bp GTGGCAGAGAAGGCAGACAGAGGGTTAGCTGGAGCAACAGAGGGGACAGTGAACGCCACTGACCAGGATTaGATGGTTCCAGAAGACACA +
Preference number: 4 (lower is better)
Translates to: VAEKADRGLAGATEGTVNATDQD*MVPEDT
Trigger: TGTGTCTTCTGGAACCATTCAATCCTGGTCAGTGGC...GTTCACTGTCCCCTCTGTTGCTCCAGCTAACCCTCTGTCTGCCTTCTCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR GCA 90 bp CGAAGGAACACCGGCCCAGGGTTAATGCAGGAAGTTAAAGAAGAGAAATCTGGAGTGCCTCTTGTTGGCTaGATCCAGGAGGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: RRNTGPGLMQEVKEEKSGVPLVG*IQEGAA
Trigger: GGCAGCGCCCTCCTGGATGCAGCCAACAAGAGGCAC...TCCAGATTTCTCTTCTTTAACTTCCTGCATTAACCCTGGGCCGGTGTTCCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR GCA 90 bp TGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTATAAAAGATGACACTGGCCACTaGCTCTCCCTGACTCAGTTC +
Preference number: 4 (lower is better)
Translates to: WSCPLWEGERGVHFRRIKDDTGH*LSLTQF
Trigger: GAACTGAGTCAGGGAGAGGCAGTGGCCAGTGTCATC...TTTTATACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR GCA 90 bp CGAAGGAACACCGGCCCAGGGTTAATGCAGGAAGTTAAAGAAGAGAAATCTGGATTGCGTCGGATGCCGTaGTGGTTGGAGCGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RRNTGPGLMQEVKEEKSGLRRMP*WLERRA
Trigger: TGCCCTCCGCTCCAACCAGCACGGCATCCGACGCAA...TCCAGATTTCTCTTCTTTAACTTCCTGCATTAACCCTGGGCCGGTGTTCCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp AGGGACTTGGCACTAGTTGGCCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGCTGACCAGGATTGAATaGTTCCAGAAGACACAGATG +
Preference number: 4 (lower is better)
Translates to: RDLALVGLLGARPRLLRWLTRIE*FQKTQM
Trigger: CATCTGTGTCTTCTGGAACCATTCAATCCTGGTCAG...CCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGGCCAACTAGTGCCAAGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CCA 90 bp CGAAGGAACACCGGCCCAGGGTTAATGCAGGAAGTTAAAGAAGAGAAATCTGGATGTCTGATGAGTGGGTaGAGGCATAGGAACCACTCT +
Preference number: 4 (lower is better)
Translates to: RRNTGPGLMQEVKEEKSGCLMSG*RHRNHS
Trigger: AGAGTGGTTCCTATGCCTCCACCCACTCATCAGACA...TCCAGATTTCTCTTCTTTAACTTCCTGCATTAACCCTGGGCCGGTGTTCCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS GCA 90 bp GCCCGAAGCTGCAGGGTGATGGTGCTGCGCCCCCTGGTGACGGCCTaGAGCAGGACGCCATCTGCCTGGCGTGTGCGGAACATGAGGCTG +
Preference number: 5 (lower is better)
Translates to: ARSCRVMVLRPLVTA*SRTPSAWRVRNMRL
Trigger: CAGCCTCATGTTCCGCACACGCCAGGCAGATGGCGTCCTGCTGCAGGCCGTCACCAGGGGGCGCAGCACCATCACCCTGCAGCTTCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS-3UTR CAA 90 bp GTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCCGGATGCCGTGCTGGTaGGAGCGGAGGGCACGGAGG +
Preference number: 5 (lower is better)
Translates to: VQGPGSSDGRFVAAASEGRMPCW*ERRARR
Trigger: CCTCCGTGCCCTCCGCTCCAACCAGCACGGCATCCG...GCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS TCA 90 bp TGGGCTTGGTCCGCTCCTCGGTCTCCAGCAGCCGGAACTGCACGGTaGCTGGCTTGTCCAGAGCCCGCGGCAGGAGTTCCTCGTCGTCGT +
Preference number: 5 (lower is better)
Translates to: WAWSAPRSPAAGTAR*LACPEPAAGVPRRR
Trigger: ACGACGACGAGGAACTCCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGCTGCTGGAGACCGAGGAGCGGACCAAGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 90 bp GGGCAGCAGTCCAGCCAGGGTGTGGTAGATGATGACACTGGCCACTaGCTCTCCCTGACTCAGTTCTGGGTGCCTCCGCTGCCGCCGGGC +
Preference number: 5 (lower is better)
Translates to: GQQSSQGVVDDDTGH*LSLTQFWVPPLPPG
Trigger: GCCCGGCGGCAGCGGAGGCACCCAGAACTGAGTCAGGGAGAGGCAGTGGCCAGTGTCATCATCTACCACACCCTGGCTGGACTGCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CCA 90 bp TCCTCTGAAGGCAGAAAGGGTGGCCCACCCCCGGGTCCTGGAGGCTaGCCCACCGACAGGCTTACGTTGAGGATATGGCCGCCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: SSEGRKGGPPPGPGG*PTDRLTLRIWPPGA
Trigger: TGCCCCAGGCGGCCATATCCTCAACGTAAGCCTGTCGGTGGGCCAGCCTCCAGGACCCGGGGGTGGGCCACCCTTTCTGCCTTCAGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp CTCATGGCGACAGGCATGACCCCATTCAGCTGTTCCTGCAGAGACTaGCGCGGAGGTGGGCGGGGAGGAGGTCCGTGCCGACTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: LMATGMTPFSCSCRD*RGGGRGGGPCRLPS
Trigger: TGAGGGCAGTCGGCACGGACCTCCTCCCCGCCCACCTCCGCGCCAGTCTCTGCAGGAACAGCTGAATGGGGTCATGCCTGTCGCCATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS-3UTR CAA 90 bp TCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGCTCGAAGCCCTGCCGTaGGGCAGCACAGGAGGCTCG +
Preference number: 5 (lower is better)
Translates to: SDGRFVAAASEGRQVGGRLEALP*GSTGGS
Trigger: CGAGCCTCCTGTGCTGCCCAACGGCAGGGCTTCGAG...CCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS GCA 90 bp TGGCTCGGCCTGGCTCAAGACGCAGAGATGACGCCTGGAGCCCTGTaGCCTCCACACTTAGCACTACGTGGCCTGCCCGAAGCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: WLGLAQDAEMTPGAL*PPHLALRGLPEAAG
Trigger: CCCTGCAGCTTCGGGCAGGCCACGTAGTGCTAAGTGTGGAGGGCACAGGGCTCCAGGCGTCATCTCTGCGTCTTGAGCCAGGCCGAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 90 bp ACACAGATGGGCTTGGTCCGCTCCTCGGTCTCCAGCAGCCGGAACTaGACGGTGACTGGCTTGTCCAGAGCCCGCGGCAGGAGTTCCTCG +
Preference number: 5 (lower is better)
Translates to: TQMGLVRSSVSSSRN*TVTGLSRARGRSSS
Trigger: CGAGGAACTCCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGCTGCTGGAGACCGAGGAGCGGACCAAGCCCATCTGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 90 bp AAGGAGGAGCGCAGGCCCGAGACAGGCCCTTTCTTCTCGAAGCCCTaGCGTTGGGCAGCACAGGAGGCTCGGGCCGACAGGATGTACAGG +
Preference number: 5 (lower is better)
Translates to: KEERRPETGPFFSKP*RWAAQEARADRMYR
Trigger: CCTGTACATCCTGTCGGCCCGAGCCTCCTGTGCTGCCCAACGGCAGGGCTTCGAGAAGAAAGGGCCTGTCTCGGGCCTGCGCTCCTCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 90 bp GCCTTGATGCTCATGGCGACAGGCATGACCCCATTCAGCTGTTCCTaGAGAGACTGGCGCGGAGGTGGGCGGGGAGGAGGTCCGTGCCGA +
Preference number: 5 (lower is better)
Translates to: ALMLMATGMTPFSCS*RDWRGGGRGGGPCR
Trigger: TCGGCACGGACCTCCTCCCCGCCCACCTCCGCGCCAGTCTCTGCAGGAACAGCTGAATGGGGTCATGCCTGTCGCCATGAGCATCAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CCA 90 bp CCAGAGGTGTGCTGGGTGGCATTGCGCAGGAGCAGGGCTAGCCTCTaGGAGCGTCCTGAGTCCAGGCCTGATTCGTTCCTCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: PEVCWVALRRSRASL*ERPESRPDSFLCSR
Trigger: GCGGCTGCAGAGGAACGAATCAGGCCTGGACTCAGGACGCTCCCAGAGGCTAGCCCTGCTCCTGCGCAATGCCACCCAGCACACCTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CCA 90 bp CTTGGTCCGCTCCTCGGTCTCCAGCAGCCGGAACTGCACGGTGACTaGCTTGTCCAGAGCCCGCGGCAGGAGTTCCTCGTCGTCGTGAAC +
Preference number: 5 (lower is better)
Translates to: LGPLLGLQQPELHGD*LVQSPRQEFLVVVN
Trigger: GTTCACGACGACGAGGAACTCCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGCTGCTGGAGACCGAGGAGCGGACCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CCA 90 bp AGGCATGACCCCATTCAGCTGTTCCTGCAGAGACTGGCGCGGAGGTaGGCGGGGAGGAGGTCCGTGCCGACTGCCCTCACTGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: RHDPIQLFLQRLARR*AGRRSVPTALTDGG
Trigger: TCCTCCATCAGTGAGGGCAGTCGGCACGGACCTCCTCCCCGCCCACCTCCGCGCCAGTCTCTGCAGGAACAGCTGAATGGGGTCATGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CCA 90 bp GACACCCTGCAAACAGCCCCGGAAGCCACGGGCCACTCCGCTGGCTaGCCCAGGAACTCCCCCGACTGTAATATTGCTCAGGTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: DTLQTAPEATGHSAG*PRNSPDCNIAQVQS
Trigger: GGACTGCACCTGAGCAATATTACAGTCGGGGGAGTTCCTGGGCCAGCCAGCGGAGTGGCCCGTGGCTTCCGGGGCTGTTTGCAGGGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp GAGCGCAGGCCCGAGACAGGCCCTTTCTTCTCGAAGCCCTGCCGTTaGGCAGCACAGGAGGCTCGGGCCGACAGGATGTACAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: ERRPETGPFFSKPCR*AAQEARADRMYRKT
Trigger: TGTCTTCCTGTACATCCTGTCGGCCCGAGCCTCCTGTGCTGCCCAACGGCAGGGCTTCGAGAAGAAAGGGCCTGTCTCGGGCCTGCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS-3UTR CAA 90 bp GCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGAAGACACAGATGGGCTaGGTCCGCTCCTCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: APQMDGSSLLLRKAGRWAKTQMG*VRSSVS
Trigger: GGAGACCGAGGAGCGGACCAAGCCCATCTGTGTCTT...CGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CAA 90 bp GATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGAGGGGAGGTCAGCCTGGTaGATGCCCAGGAGAAAGACC +
Preference number: 5 (lower is better)
Translates to: DGRFVAAASEGRQVGGREGRSAW*MPRRKT
Trigger: GGTCTTTCTCCTGGGCATCAACCAGGCTGACCTCCC...CTCCCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS TCA 90 bp GTGACTGGCTTGTCCAGAGCCCGCGGCAGGAGTTCCTCGTCGTCGTaGACGCTGATGCTCACCACAGGGGTGTTGATGACGGGGCGCTTG +
Preference number: 5 (lower is better)
Translates to: VTGLSRARGRSSSSS*TLMLTTGVLMTGRL
Trigger: CAAGCGCCCCGTCATCAACACCCCTGTGGTGAGCATCAGCGTTCACGACGACGAGGAACTCCTGCCGCGGGCTCTGGACAAGCCAGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 90 bp CCCCACCCAGCAACAAGGGCCCTGTCAGGTCCAGAGACTTCTTGCTaGCTCCTTGGGTGCCCTGGGCAGCACAGGAGTAGTTGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: PHPATRALSGPETSC*LLGCPGQHRSSCPA
Trigger: TGCTGGGCAACTACTCCTGTGCTGCCCAGGGCACCCAAGGAGGCAGCAAGAAGTCTCTGGACCTGACAGGGCCCTTGTTGCTGGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 90 bp ATGTGCCGGCTATCCACCTGGAGGTCCTTCATGCAGCCCACAAAGTaGCGCATTCGGACGGGGAAGCTCTCGGGCAGATCCGGCACCCCA +
Preference number: 5 (lower is better)
Translates to: MCRLSTWRSFMQPTK*RIRTGKLSGRSGTP
Trigger: TGGGGTGCCGGATCTGCCCGAGAGCTTCCCCGTCCGAATGCGGCACTTTGTGGGCTGCATGAAGGACCTCCAGGTGGATAGCCGGCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 90 bp GTCAAAGGACAGAATGGCATGGCCAGGGCCCCCGCTGGCTCCCAGTaGCAGCTGTGCATGATGCCAGTCACCATCATTGGCTCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VKGQNGMARAPAGSQ*QLCMMPVTIIGSAW
Trigger: CCAGGCCGAGCCAATGATGGTGACTGGCATCATGCACAGCTGGCACTGGGAGCCAGCGGGGGCCCTGGCCATGCCATTCTGTCCTTTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 90 bp TCTAGACTGCTGATACCCTCAGGTGTCTCGCTTACCCTGACACCCTaGAAACAGCCCCGGAAGCCACGGGCCACTCCGCTGGCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: SRLLIPSGVSLTLTP*KQPRKPRATPLAGP
Trigger: TGGGCCAGCCAGCGGAGTGGCCCGTGGCTTCCGGGGCTGTTTGCAGGGTGTCAGGGTAAGCGAGACACCTGAGGGTATCAGCAGTCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp AGCCCGTTACGCTCCTTGGTAGCAAACGAGAGGGCCAGGGTGAAGTaGAAGCGCTGGCGCAGGCCACGGAAGGTGATGAAGGAGCGGGCA +
Preference number: 5 (lower is better)
Translates to: SPLRSLVANERARVK*KRWRRPRKVMKERA
Trigger: TGCCCGCTCCTTCATCACCTTCCGTGGCCTGCGCCAGCGCTTCCACTTCACCCTGGCCCTCTCGTTTGCTACCAAGGAGCGTAACGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp CGCTGGCTCCCAGTGCCAGCTGTGCATGATGCCAGTCACCATCATTaGCTCGGCCTGGCTCAAGACGCAGAGATGACGCCTGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: RWLPVPAVHDASHHH*LGLAQDAEMTPGAL
Trigger: CAGGGCTCCAGGCGTCATCTCTGCGTCTTGAGCCAGGCCGAGCCAATGATGGTGACTGGCATCATGCACAGCTGGCACTGGGAGCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp CAGGTAGCCCGAACCGCGTGCGGGGCCACCAGATCCCAGCCTCTATaGCCCGTGGGCAGCTGTCGTAATTCACTTCACAGCCATTGGTGG +
Preference number: 5 (lower is better)
Translates to: QVARTACGATRSQPL*PVGSCRNSLHSHWW
Trigger: CCACCAATGGCTGTGAAGTGAATTACGACAGCTGCCCACGGGCCATAGAGGCTGGGATCTGGTGGCCCCGCACGCGGTTCGGGCTACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS-3UTR CAA 90 bp ACTGAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGAGGGCAGCTGTGAGGTaGCGTCGGATGCCGTGCTGG +
Preference number: 5 (lower is better)
Translates to: TEERLGHVLGGPVLFGKGRAAVR*RRMPCW
Trigger: CCAGCACGGCATCCGACGCAACCTCACAGCTGCCCT...CCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CAA 90 bp CCTTCTGGGTGCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGCTGCAGGCGAACTaGAGTGCTTTCCGGACCTCC +
Preference number: 5 (lower is better)
Translates to: PSGCKAQAPQMDGSSLLLRLQAN*SAFRTS
Trigger: GGAGGTCCGGAAAGCACTCAAGTTCGCCTGCAGCCG...AAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCACCCAGAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS GCA 90 bp GGTAAGCGTGGCCAAGGCACTCCGTCGGGGCATACCGTGATCCTGTaGAGTGACCCTGAAGACGTGGGTGCTCTTGGTCTCCCGATCCAG +
Preference number: 5 (lower is better)
Translates to: GKRGQGTPSGHTVIL*SDPEDVGALGLPIQ
Trigger: CTGGATCGGGAGACCAAGAGCACCCACGTCTTCAGGGTCACTGCACAGGATCACGGTATGCCCCGACGGAGTGCCTTGGCCACGCTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 90 bp AGTCGGCCATGTCGATGTGCCGGCTATCCACCTGGAGGTCCTTCATaGAGCCCACAAAGTGCCGCATTCGGACGGGGAAGCTCTCGGGCA +
Preference number: 5 (lower is better)
Translates to: SRPCRCAGYPPGGPS*SPQSAAFGRGSSRA
Trigger: TGCCCGAGAGCTTCCCCGTCCGAATGCGGCACTTTGTGGGCTGCATGAAGGACCTCCAGGTGGATAGCCGGCACATCGACATGGCCGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 90 bp CAAGGGCGCTGGCGTAAGCCTCATAGTGCTGGAGCAGCCAGGCGGTaGCACCCTCTGTCTGCTGGATCAGTTCCCAGTGCCTCTTGTTGG +
Preference number: 5 (lower is better)
Translates to: QGRWRKPHSAGAARR*HPLSAGSVPSASCW
Trigger: CCAACAAGAGGCACTGGGAACTGATCCAGCAGACAGAGGGTGGCACCGCCTGGCTGCTCCAGCACTATGAGGCTTACGCCAGCGCCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 90 bp TGGACTCCTCCCTCAGCAAGAAGGGGATGTAGCTGGGCTGACTCTTaGCGGAGCGGCTGGCACTGTGCAACGAGCCAGCCGAATCTCCGT +
Preference number: 5 (lower is better)
Translates to: WTPPSARRGCSWADS*RSGWHCATSQPNLR
Trigger: ACGGAGATTCGGCTGGCTCGTTGCACAGTGCCAGCCGCTCCGGCAAGAGTCAGCCCAGCTACATCCCCTTCTTGCTGAGGGAGGAGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CCA 90 bp GGCATTGCTGCCCTTGTCTCTATCGGAGGCGGTGACTCGGAGAACTaGGGCTCCTGGGGTCACATCCTCCCGCACCTGGACCACATAACG +
Preference number: 5 (lower is better)
Translates to: GIAALVSIGGGDSEN*GSWGHILPHLDHIT
Trigger: CGTTATGTGGTCCAGGTGCGGGAGGATGTGACCCCAGGAGCCCCAGTTCTCCGAGTCACCGCCTCCGATAGAGACAAGGGCAGCAATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp CACATCCAGGACAGTAACTGTCACTTCCATGGGTGTGCGGGCTGGTaGCATGCCCTTGTCCACCGCATAGGCCCGCAGGACGTACTGGGC +
Preference number: 5 (lower is better)
Translates to: HIQDSNCHFHGCAGW*HALVHRIGPQDVLG
Trigger: GCCCAGTACGTCCTGCGGGCCTATGCGGTGGACAAGGGCATGCCACCAGCCCGCACACCCATGGAAGTGACAGTTACTGTCCTGGATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp TCACCATCATTGGCTCGGCCTGGCTCAAGACGCAGAGATGACGCCTaGAGCCCTGTGCCCTCCACACTTAGCACTACGTGGCCTGCCCGA +
Preference number: 5 (lower is better)
Translates to: SPSLARPGSRRRDDA*SPVPSTLSTTWPAR
Trigger: TCGGGCAGGCCACGTAGTGCTAAGTGTGGAGGGCACAGGGCTCCAGGCGTCATCTCTGCGTCTTGAGCCAGGCCGAGCCAATGATGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS-3UTR CAA 90 bp GCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGATGCCTTTGTGAGGTaGGGTAGAAGGGCCCGGAAG +
Preference number: 5 (lower is better)
Translates to: ARPRLLRWTVRRCCFGRQDAFVR*GRRARK
Trigger: CTTCCGGGCCCTTCTACCCAACCTCACAAAGGCATC...CTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS TCA 90 bp TGTAGTGCACTAGGGCATTGCTGCCCTTGTCTCTATCGGAGGCGGTaGCTCGGAGAACTGGGGCTCCTGGGGTCACATCCTCCCGCACCT +
Preference number: 5 (lower is better)
Translates to: CSALGHCCPCLYRRR*LGELGLLGSHPPAP
Trigger: AGGTGCGGGAGGATGTGACCCCAGGAGCCCCAGTTCTCCGAGTCACCGCCTCCGATAGAGACAAGGGCAGCAATGCCCTAGTGCACTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 90 bp GCCGTGGGGCCTTTAAGCAAGGGTGCTCTTCAGGCAGGGTCAGCGTaGCTTGTGGAGAAAGGTGTCCTCCGATACCCAGGAGACGACAGC +
Preference number: 5 (lower is better)
Translates to: AVGPLSKGALQAGSA*LVEKGVLRYPGDDS
Trigger: GCTGTCGTCTCCTGGGTATCGGAGGACACCTTTCTCCACAAGGCACGCTGACCCTGCCTGAAGAGCACCCTTGCTTAAAGGCCCCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 90 bp CCGTGTAGCCATCCAGACAGAGGCAGGTATAGCCACCCTCTCGGCTaGGGCAGCGCCCATGGGGTCCACAAGGTCTTGAGTAACAGAGGT +
Preference number: 5 (lower is better)
Translates to: PCSHPDRGRYSHPLG*GSAHGVHKVLSNRG
Trigger: ACCTCTGTTACTCAAGACCTTGTGGACCCCATGGGCGCTGCCGCAGCCGAGAGGGTGGCTATACCTGCCTCTGTCTGGATGGCTACACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 90 bp CAAGGCAGGGTCGGGACTGGGCTTCCGGCTGCAGGCGAACTTGAGTaGTTTCCGGACCTCCTTGCTGAGCACCACGTAGGAGAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: QGRVGTGLPAAGELE*FPDLLAEHHVGEED
Trigger: ATCTTCCTCTCCTACGTGGTGCTCAGCAAGGAGGTCCGGAAAGCACTCAAGTTCGCCTGCAGCCGGAAGCCCAGTCCCGACCCTGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CCA 90 bp TTGCCCAGCACGGGCGGGTTATCATTGCGGTCAAGGAGGCGGACATaGACAGTAGCCCTGCTCACCAAGGGAGCAGACGTAGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: LPSTGGLSLRSRRRT*TVALLTKGADVAWM
Trigger: CATCCAGGCTACGTCTGCTCCCTTGGTGAGCAGGGCTACTGTCCATGTCCGCCTCCTTGACCGCAATGATAACCCGCCCGTGCTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp CCGGGTCCTGGAGGCTGGCCCACCGACAGGCTTACGTTGAGGATATaGCCGCCTGGGGCATCAGTATCCCTTTGCACATTGAAGACCACC +
Preference number: 5 (lower is better)
Translates to: PGPGGWPTDRLTLRI*PPGASVSLCTLKTT
Trigger: GGTGGTCTTCAATGTGCAAAGGGATACTGATGCCCCAGGCGGCCATATCCTCAACGTAAGCCTGTCGGTGGGCCAGCCTCCAGGACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS-3UTR CAA 90 bp GATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGGCGGTAGGGAGAAGCTTGTCATATGGTaGCACTGGCAGCTGACGTGG +
Preference number: 5 (lower is better)
Translates to: DGRFVAAASEGRQVGGREKLVIW*HWQLTW
Trigger: CCACGTCAGCTGCCAGTGCAACCATATGACAAGCTT...CTCCCTACCGCCCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS TCA 90 bp ACCAAGATGGTAAGCGTGGCCAAGGCACTCCGTCGGGGCATACCGTaGTCCTGTGCAGTGACCCTGAAGACGTGGGTGCTCTTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: TKMVSVAKALRRGIP*SCAVTLKTWVLLVS
Trigger: GGAGACCAAGAGCACCCACGTCTTCAGGGTCACTGCACAGGATCACGGTATGCCCCGACGGAGTGCCTTGGCCACGCTTACCATCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp CGGAAGGTGATGAAGGAGCGGGCAGGGAAGCTGCGTGTGGTCACCTaGCAGAAGGGTTTCTCAAAGTCCCCGGAGGGGCAGTCACATTTG +
Preference number: 5 (lower is better)
Translates to: RKVMKERAGKLRVVT*QKGFSKSPEGQSHL
Trigger: CAAATGTGACTGCCCCTCCGGGGACTTTGAGAAACCCTTCTGCCAGGTGACCACACGCAGCTTCCCTGCCCGCTCCTTCATCACCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp GTTGCCCATAGTCAAAGGACAGAATGGCATGGCCAGGGCCCCCGCTaGCTCCCAGTGCCAGCTGTGCATGATGCCAGTCACCATCATTGG +
Preference number: 5 (lower is better)
Translates to: VAHSQRTEWHGQGPR*LPVPAVHDASHHHW
Trigger: CCAATGATGGTGACTGGCATCATGCACAGCTGGCACTGGGAGCCAGCGGGGGCCCTGGCCATGCCATTCTGTCCTTTGACTATGGGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp GCTGCAGTAGCTGTTGGTAGGGCATGGATTCGAGTCACAGGGATCTaGCCAGCTACAGCCTGGCTCCACATTGATGCTCTCCCCGCGGCT +
Preference number: 5 (lower is better)
Translates to: AAVAVGRAWIRVTGI*PATAWLHIDALPAA
Trigger: AGCCGCGGGGAGAGCATCAATGTGGAGCCAGGCTGTAGCTGGCCAGATCCCTGTGACTCGAATCCATGCCCTACCAACAGCTACTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp TCAGCAAGAAGGGGATGTAGCTGGGCTGACTCTTGCCGGAGCGGCTaGCACTGTGCAACGAGCCAGCCGAATCTCCGTAAGGCTGGTACA +
Preference number: 5 (lower is better)
Translates to: SARRGCSWADSCRSG*HCATSQPNLRKAGT
Trigger: TGTACCAGCCTTACGGAGATTCGGCTGGCTCGTTGCACAGTGCCAGCCGCTCCGGCAAGAGTCAGCCCAGCTACATCCCCTTCTTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS-3UTR CAA 90 bp TGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTATAAAATGCACGGTGACTGGCTaGTCCAGAGCCCGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: WSCPLWEGERGVHFRRIKCTVTG*SRARGR
Trigger: CCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCA...TTTTATACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CAA 90 bp GCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGATCATGTTGTTGGGCTaGGCCTTCCAAGAACAGGCC +
Preference number: 5 (lower is better)
Translates to: ARPRLLRWTVRRCCFGRQIMLLG*AFQEQA
Trigger: GGCCTGTTCTTGGAAGGCCAAGCCCAACAACATGAT...CTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS TCA 90 bp CCACATGATCCGGGGGTGTGGCCAACGTGGCTGCCACGGCCTGAATaGAGAGTCCCAGCAGTGGTGAGAGAAAGCGTTCTGGAGACATGT +
Preference number: 5 (lower is better)
Translates to: PHDPGVWPTWLPRPE*RVPAVVRESVLETC
Trigger: ACATGTCTCCAGAACGCTTTCTCTCACCACTGCTGGGACTCTTCATTCAGGCCGTGGCAGCCACGTTGGCCACACCCCCGGATCATGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 90 bp CGATCTTCTTGGTGGGGCAGCCAGGCACAGTGCCATTGTTGGCAATaGAGTCGGCCATGTCGATGTGCCGGCTATCCACCTGGAGGTCCT +
Preference number: 5 (lower is better)
Translates to: RSSWWGSQAQCHCWQ*SRPCRCAGYPPGGP
Trigger: AGGACCTCCAGGTGGATAGCCGGCACATCGACATGGCCGACTTCATTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp GAGGACGGCCACCGTCCTGAGCCCGGATCCGAAGCGTATACTCTTTaGTTGTCTCATAGTCGAGTGGGCTTACCACATCCAGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: EDGHRPEPGSEAYTL*LSHSRVGLPHPGLQ
Trigger: CTGGAGCCCTGGATGTGGTAAGCCCACTCGACTATGAGACAACCAAAGAGTATACGCTTCGGATCCGGGCTCAGGACGGTGGCCGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp ATTCACATCCAGGACAGTAACTGTCACTTCCATGGGTGTGCGGGCTaGTGGCATGCCCTTGTCCACCGCATAGGCCCGCAGGACGTACTG +
Preference number: 5 (lower is better)
Translates to: IHIQDSNCHFHGCAG*WHALVHRIGPQDVL
Trigger: CAGTACGTCCTGCGGGCCTATGCGGTGGACAAGGGCATGCCACCAGCCCGCACACCCATGGAAGTGACAGTTACTGTCCTGGATGTGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 90 bp GGCCAACGTGGCTGCCACGGCCTGAATGAAGAGTCCCAGCAGTGGTaGGAGAAAGCGTTCTGGAGACATGTCTTCCAAGCGCAGCGTGAT +
Preference number: 5 (lower is better)
Translates to: GQRGCHGLNEESQQW*EKAFWRHVFQAQRD
Trigger: ATCACGCTGCGCTTGGAAGACATGTCTCCAGAACGCTTTCTCTCACCACTGCTGGGACTCTTCATTCAGGCCGTGGCAGCCACGTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 90 bp AGCTTGCAAGACTGGCATCTGAGCCGTGGGGCCTTTAAGCAAGGGTaGTCTTCAGGCAGGGTCAGCGTGCCTTGTGGAGAAAGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: SLQDWHLSRGAFKQG*SSGRVSVPCGERCP
Trigger: AGGACACCTTTCTCCACAAGGCACGCTGACCCTGCCTGAAGAGCACCCTTGCTTAAAGGCCCCACGGCTCAGATGCCAGTCTTGCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 90 bp GCCTGTGCCATTGTTAATGGTGAAGGGAAAGTCGTGCCCAACCCCTaGCAGGCTATACTCGAGGCGGGCGTTATCACCAGCGTCAGCATC +
Preference number: 5 (lower is better)
Translates to: ACAIVNGEGKVVPNP*QAILEAGVITSVSI
Trigger: GATGCTGACGCTGGTGATAACGCCCGCCTCGAGTATAGCCTGGCAGGGGTTGGGCACGACTTTCCCTTCACCATTAACAATGGCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp CAGAGGTACCAGCAGGCTGGTTCTCAGGCACTGTGGCCTGGTAGCTaGGAGGCTGGAACTGGGGAGCTGTATTCACATTCCTTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: QRYQQAGSQALWPGS*EAGTGELYSHSFSC
Trigger: GCAGGAAAAGGAATGTGAATACAGCTCCCCAGTTCCAGCCTCCCAGCTACCAGGCCACAGTGCCTGAGAACCAGCCTGCTGGTACCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp TCGCAGCTGAACGCATTCCACTGGTTCACACAGGTGCCACCGTTGTaGCAAATGCTGCTGTCGCACACGATCTTCTTGGTGGGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: SQLNAFHWFTQVPPL*QMLLSHTIFLVGQP
Trigger: TGGCTGCCCCACCAAGAAGATCGTGTGCGACAGCAGCATTTGCCACAACGGTGGCACCTGTGTGAACCAGTGGAATGCGTTCAGCTGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS-3UTR CAA 90 bp CAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGGCAGGTGGACAGAGATGACAATGTaGGGTGTGACGATGGTGAAG +
Preference number: 5 (lower is better)
Translates to: QAPQMDGSSLLLRKAGRWTEMTM*GVTMVK
Trigger: CTTCACCATCGTCACACCCAACATTGTCATCTCTGT...CCACCTGCCTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS-3UTR CAA 90 bp TGGTCCTGTCCTCTTTGGGAAGGGGAAAGGGGAGTCCACTTCCGGCGTATAAAATCCACCGTGCCTGCCTaGATGCTCATGGCGACAGGC +
Preference number: 5 (lower is better)
Translates to: WSCPLWEGERGVHFRRIKSTVPA*MLMATG
Trigger: GCCTGTCGCCATGAGCATCAAGGCAGGCACGGTGGA...TTTTATACGCCGGAAGTGGACTCCCCTTTCCCCTTCCCAAAGAGGACAGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS TCA 90 bp TTTTCGCTGATGGTGGGCAGACACTTCTTCTTGAGGATGCCTTTGTaGGGTTGGGTAGAAGGGCCCGGAAGGGGTCCCAGAGACCCTTCC +
Preference number: 5 (lower is better)
Translates to: FSLMVGRHFFLRMPL*GWVEGPGRGPRDPS
Trigger: GGAAGGGTCTCTGGGACCCCTTCCGGGCCCTTCTACCCAACCTCACAAAGGCATCCTCAAGAAGAAGTGTCTGCCCACCATCAGCGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 90 bp ATTGCTCAGGTGCAGTCCATGCAGCCGAGGGCCCAGATTACCCTCTaGCTTCTGTTGCCCATAGTCAAAGGACAGAATGGCATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: IAQVQSMQPRAQITL*LLLPIVKGQNGMAR
Trigger: CCTGGCCATGCCATTCTGTCCTTTGACTATGGGCAACAGAAGGCAGAGGGTAATCTGGGCCCTCGGCTGCATGGACTGCACCTGAGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp TGGAGGCTGGCCCACCGACAGGCTTACGTTGAGGATATGGCCGCCTaGGGCATCAGTATCCCTTTGCACATTGAAGACCACCACATGATC +
Preference number: 5 (lower is better)
Translates to: WRLAHRQAYVEDMAA*GISIPLHIEDHHMI
Trigger: GATCATGTGGTGGTCTTCAATGTGCAAAGGGATACTGATGCCCCAGGCGGCCATATCCTCAACGTAAGCCTGTCGGTGGGCCAGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS-3UTR CAA 90 bp GCAAGGCCCAGGCTCCTCAGATGGACGGTTCGTCGCTGCTGCTTCGGAAGGCAGTACCACTATTCTCCTTaGTTGTGGTCCCAAAGTCTC +
Preference number: 5 (lower is better)
Translates to: ARPRLLRWTVRRCCFGRQYHYSP*LWSQSL
Trigger: GAGACTTTGGGACCACAACAAAGGAGAATAGTGGTA...CTGCCTTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS GCA 90 bp ACAGAGATCCAGCCTGTGCCATTGTTAATGGTGAAGGGAAAGTCGTaGCCAACCCCTGCCAGGCTATACTCGAGGCGGGCGTTATCACCA +
Preference number: 5 (lower is better)
Translates to: TEIQPVPLLMVKGKS*PTPARLYSRRALSP
Trigger: TGGTGATAACGCCCGCCTCGAGTATAGCCTGGCAGGGGTTGGGCACGACTTTCCCTTCACCATTAACAATGGCACAGGCTGGATCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp TTAAGGATGCAACAGAGGTACCAGCAGGCTGGTTCTCAGGCACTGTaGCCTGGTAGCTGGGAGGCTGGAACTGGGGAGCTGTATTCACAT +
Preference number: 5 (lower is better)
Translates to: LRMQQRYQQAGSQAL*PGSWEAGTGELYSH
Trigger: ATGTGAATACAGCTCCCCAGTTCCAGCCTCCCAGCTACCAGGCCACAGTGCCTGAGAACCAGCCTGCTGGTACCTCTGTTGCATCCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp GGTCTCCCGATCCAGCTCCTCAGCTGTGGTGACAACACCGGTGATTaGGTCCAAGGAGAAGAAATGATTGGAGCGGCTATCAAAGAGGGC +
Preference number: 5 (lower is better)
Translates to: GLPIQLLSCGDNTGD*VQGEEMIGAAIKEG
Trigger: GCCCTCTTTGATAGCCGCTCCAATCATTTCTTCTCCTTGGACCCAATCACCGGTGTTGTCACCACAGCTGAGGAGCTGGATCGGGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp TGTGTCACAGCCATCCACGGACACCACGGCTACCTTCTGCTCAGATaGACCTTGGGGAAGCCCTGTCTGACCCAACAGTGGCTTGTTATA +
Preference number: 5 (lower is better)
Translates to: CVTAIHGHHGYLLLR*TLGKPCLTQQWLVI
Trigger: TATAACAAGCCACTGTTGGGTCAGACAGGGCTTCCCCAAGGTCCATCTGAGCAGAAGGTAGCCGTGGTGTCCGTGGATGGCTGTGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS-3UTR CAA 90 bp ACTGAAGAGAGGCTGGGACACGTCCTGGGTGGTCCTGTCCTCTTTGGGAAGGGGCACTATTCTCCTTTGTaGTGGTCCCAAAGTCTCCCA +
Preference number: 5 (lower is better)
Translates to: TEERLGHVLGGPVLFGKGHYSPL*WSQSLP
Trigger: TGGGAGACTTTGGGACCACAACAAAGGAGAATAGTG...CCCCTTCCCAAAGAGGACAGGACCACCCAGGACGTGTCCCAGCCTCTCTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS TCA 90 bp CAGTCTGAGCATCCAGATAGAACTGGCCCCGAGCATTGCCACTCATaGTGCTGTAGTGCACTAGGGCATTGCTGCCCTTGTCTCTATCGG +
Preference number: 5 (lower is better)
Translates to: QSEHPDRTGPEHCHS*CCSALGHCCPCLYR
Trigger: CCGATAGAGACAAGGGCAGCAATGCCCTAGTGCACTACAGCATCATGAGTGGCAATGCTCGGGGCCAGTTCTATCTGGATGCTCAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp CCATGGTGTACTCAAGTCGACCCGCCTCACCCTCATCTGGATCAATaGCTCTTAAGGATGCAACAGAGGTACCAGCAGGCTGGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: PWCTQVDPPHPHLDQ*LLRMQQRYQQAGSQ
Trigger: CTGAGAACCAGCCTGCTGGTACCTCTGTTGCATCCTTAAGAGCCATTGATCCAGATGAGGGTGAGGCGGGTCGACTTGAGTACACCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 90 bp GGTGACATTCACTACTATCTGAGCTGTGTCCTGCCTTGTGCCATCTaGGGCAGTCACTGCCAGCACATACTGCCGCTCGAGTTTGTAGTC +
Preference number: 5 (lower is better)
Translates to: GDIHYYLSCVLPCAI*GSHCQHILPLEFVV
Trigger: GACTACAAACTCGAGCGGCAGTATGTGCTGGCAGTGACTGCCTCAGATGGCACAAGGCAGGACACAGCTCAGATAGTAGTGAATGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 90 bp AAAGAAGAGAAATTCAGAGCCAGAGGAGTCCTCATCCACCGTGCCTaGCTTGATGCTCATGGCGACAGGCATGACCCCATTCAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: KEEKFRARGVLIHRA*LDAHGDRHDPIQLF
Trigger: GAACAGCTGAATGGGGTCATGCCTGTCGCCATGAGCATCAAGGCAGGCACGGTGGATGAGGACTCCTCTGGCTCTGAATTTCTCTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp CCAAGGAGAAGAAATGATTGGAGCGGCTATCAAAGAGGGCATCCATaGTGTACTCAAGTCGACCCGCCTCACCCTCATCTGGATCAATGG +
Preference number: 5 (lower is better)
Translates to: PRRRNDWSGYQRGHP*CTQVDPPHPHLDQW
Trigger: CCATTGATCCAGATGAGGGTGAGGCGGGTCGACTTGAGTACACCATGGATGCCCTCTTTGATAGCCGCTCCAATCATTTCTTCTCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp CAAGGTAATTTGGTAAACACTCGCAGATGTAGCCGTGGGGTGTATTaGGTTTTCGGGTACACACGGACTGGTGCTCGCATGGGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: QGNLVNTRRCSRGVY*VFGYTRTGARMGSG
Trigger: ACCTGAACCCATGCGAGCACCAGTCCGTGTGTACCCGAAAACCCAATACACCCCACGGCTACATCTGCGAGTGTTTACCAAATTACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp CGTGACATATCCATAAGCACAGCAAAGCTTGTCATATGGTTGCACTaGCAGCTGACGTGGCTCTCGTTACGGAAGACGACTTCGCAGCCT +
Preference number: 5 (lower is better)
Translates to: RDISISTAKLVIWLH*QLTWLSLRKTTSQP
Trigger: AGGCTGCGAAGTCGTCTTCCGTAACGAGAGCCACGTCAGCTGCCAGTGCAACCATATGACAAGCTTTGCTGTGCTTATGGATATGTCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 90 bp CTCTACACCAAAGCTGTAGAAATCAACCTCTTCCCGATCCAACTCTaGGGCCACAGAGATCCAGCCTGTGCCATTGTTAATGGTGAAGGG +
Preference number: 5 (lower is better)
Translates to: LYTKAVEINLFPIQL*GHRDPACAIVNGEG
Trigger: CCCTTCACCATTAACAATGGCACAGGCTGGATCTCTGTGGCCGCAGAGTTGGATCGGGAAGAGGTTGATTTCTACAGCTTTGGTGTAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 90 bp GTGGGGTGTATTGGGTTTTCGGGTACACACGGACTGGTGCTCGCATaGGTTCAGGTCACACACATTTGTACAGTTGTCACCATAGTAACC +
Preference number: 5 (lower is better)
Translates to: VGCIGFSGTHGLVLA*VQVTHICTVVTIVT
Trigger: GGTTACTATGGTGACAACTGTACAAATGTGTGTGACCTGAACCCATGCGAGCACCAGTCCGTGTGTACCCGAAAACCCAATACACCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 90 bp TCAGCTGTGGTGACAACACCGGTGATTGGGTCCAAGGAGAAGAAATaGTTGGAGCGGCTATCAAAGAGGGCATCCATGGTGTACTCAAGT +
Preference number: 5 (lower is better)
Translates to: SAVVTTPVIGSKEKK*LERLSKRASMVYSS
Trigger: ACTTGAGTACACCATGGATGCCCTCTTTGATAGCCGCTCCAATCATTTCTTCTCCTTGGACCCAATCACCGGTGTTGTCACCACAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp GCGGCTGGTGTAGAGCCAGAGGTTCGAAGCAGAGGCTaGGCAGAGCCAGCCCACGGGGGCGCAGGCCCCAGA +
Preference number: 6 (lower is better)
Translates to: AAGVEPEVRSRG*AEPAHGGAGPR
Trigger: TCTGGGGCCTGCGCCCCCGTGGGCTGGCTCTGCCCAGCCTCTGCTTCGAACCTCTGGCTCTACACCAGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp GCGCCCCCTGGTGACGGCCTGCAGCAGGACGCCATCTaGCTGGCGTGTGCGGAACATGAGGCTGAGGTGCCA +
Preference number: 6 (lower is better)
Translates to: APPGDGLQQDAI*LACAEHEAEVP
Trigger: TGGCACCTCAGCCTCATGTTCCGCACACGCCAGGCAGATGGCGTCCTGCTGCAGGCCGTCACCAGGGGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp GGCTTGGTCCGCTCCTCGGTCTCCAGCAGCCGGAACTaGACGGTGACTGGCTTGTCCAGAGCCCGCGGCAGG +
Preference number: 6 (lower is better)
Translates to: GLVRSSVSSSRN*TVTGLSRARGR
Trigger: CCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGCTGCTGGAGACCGAGGAGCGGACCAAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 72 bp AGGCCCAGGGCAGCTGTGAGGTTGCGTCGGATGCCGTaGTGGTTGGAGCGGAGGGCACGGAGGAGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: RPRAAVRLRRMP*WLERRARRRVR
Trigger: CCTCACCCTCCTCCGTGCCCTCCGCTCCAACCAGCACGGCATCCGACGCAACCTCACAGCTGCCCTGGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 72 bp CGCAGGCCCGAGACAGGCCCTTTCTTCTCGAAGCCCTaGCGTTGGGCAGCACAGGAGGCTCGGGCCGACAGG +
Preference number: 6 (lower is better)
Translates to: RRPETGPFFSKP*RWAAQEARADR
Trigger: CCTGTCGGCCCGAGCCTCCTGTGCTGCCCAACGGCAGGGCTTCGAGAAGAAAGGGCCTGTCTCGGGCCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 72 bp CCCTCCACACTTAGCACTACGTGGCCTGCCCGAAGCTaGAGGGTGATGGTGCTGCGCCCCCTGGTGACGGCC +
Preference number: 6 (lower is better)
Translates to: PSTLSTTWPARS*RVMVLRPLVTA
Trigger: GGCCGTCACCAGGGGGCGCAGCACCATCACCCTGCAGCTTCGGGCAGGCCACGTAGTGCTAAGTGTGGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp CCCAGGGCAGCTGTGAGGTTGCGTCGGATGCCGTGCTaGTTGGAGCGGAGGGCACGGAGGAGGGTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: PRAAVRLRRMPC*LERRARRRVRK
Trigger: CTTCCTCACCCTCCTCCGTGCCCTCCGCTCCAACCAGCACGGCATCCGACGCAACCTCACAGCTGCCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS TCA 72 bp CGTCCCCCGGATCCCAGAGAACGACAGGGCCCCACTTaGTCTCCCAGTAGTGGCGACGGTGGCAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: RPPDPRERQGPT*SPSSGDGGSSS
Trigger: GCTGCTGCTGCCACCGTCGCCACTACTGGGAGATCAAGTGGGGCCCTGTCGTTCTCTGGGATCCGGGGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp GCTGCGGTTGAGGTACAGGCGCTCCTGGAGATCCTCTaGAGGCAGAAAGGGTGGCCCACCCCCGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: AAVEVQALLEIL*RQKGWPTPGSW
Trigger: CCAGGACCCGGGGGTGGGCCACCCTTTCTGCCTTCAGAGGATCTCCAGGAGCGCCTGTACCTCAACCGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp TCCGCTCCTCGGTCTCCAGCAGCCGGAACTGCACGGTaGCTGGCTTGTCCAGAGCCCGCGGCAGGAGTTCCT +
Preference number: 6 (lower is better)
Translates to: SAPRSPAAGTAR*LACPEPAAGVP
Trigger: AGGAACTCCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGCTGCTGGAGACCGAGGAGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CCA 72 bp GCCTGGAGCCCTGTGCCCTCCACACTTAGCACTACGTaGCCTGCCCGAAGCTGCAGGGTGATGGTGCTGCGC +
Preference number: 6 (lower is better)
Translates to: AWSPVPSTLSTT*PARSCRVMVLR
Trigger: GCGCAGCACCATCACCCTGCAGCTTCGGGCAGGCCACGTAGTGCTAAGTGTGGAGGGCACAGGGCTCCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp CTCCTCGGTCTCCAGCAGCCGGAACTGCACGGTGACTaGCTTGTCCAGAGCCCGCGGCAGGAGTTCCTCGTC +
Preference number: 6 (lower is better)
Translates to: LLGLQQPELHGD*LVQSPRQEFLV
Trigger: GACGAGGAACTCCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGCTGCTGGAGACCGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CAA 72 bp ACGCGCTGCGCCGAGATGGCGGTGAGCAGGCTGCGGTaGAGGTACAGGCGCTCCTGGAGATCCTCTGAAGGC +
Preference number: 6 (lower is better)
Translates to: TRCAEMAVSRLR*RYRRSWRSSEG
Trigger: GCCTTCAGAGGATCTCCAGGAGCGCCTGTACCTCAACCGCAGCCTGCTCACCGCCATCTCGGCGCAGCGCGT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp TCGGTCTCCAGCAGCCGGAACTGCACGGTGACTGGCTaGTCCAGAGCCCGCGGCAGGAGTTCCTCGTCGTCG +
Preference number: 6 (lower is better)
Translates to: SVSSSRNCTVTG*SRARGRSSSSS
Trigger: CGACGACGAGGAACTCCTGCCGCGGGCTCTGGACAAGCCAGTCACCGTGCAGTTCCGGCTGCTGGAGACCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS TCA 72 bp TCTGTGCGTTGGTCCCTTCATCTGGGTCAGTGGCTGTaGCCCGGGCCACGGCCAGCCCGATGGGGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: SVRWSLHLGQWL*PGPRPARWGCS
Trigger: AGAACAGCCCCATCGGGCTGGCCGTGGCCCGGGTCACAGCCACTGACCCAGATGAAGGGACCAACGCACAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp CCGAGCGAGGATCGATCTCAAAGGCGTCTGAGGGGCTaGCTCCGGCCCCCTCCAGCAGGCGGTACAGAATGT +
Preference number: 6 (lower is better)
Translates to: PSEDRSQRRLRG*LRPPPAGGTEC
Trigger: ACATTCTGTACCGCCTGCTGGAGGGGGCCGGAGGCAGCCCCTCAGACGCCTTTGAGATCGATCCTCGCTCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp CACTGCCGAAGTAGCCAGAGGTGTGCTGGGTGGCATTaGGCAGGAGCAGGGCTAGCCTCTGGGAGCGTCCTG +
Preference number: 6 (lower is better)
Translates to: HCRSSQRCAGWH*AGAGLASGSVL
Trigger: CAGGACGCTCCCAGAGGCTAGCCCTGCTCCTGCGCAATGCCACCCAGCACACCTCTGGCTACTTCGGCAGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 72 bp CCCTCAGCAAGAAGGGGATGTAGCTGGGCTGACTCTTaGCGGAGCGGCTGGCACTGTGCAACGAGCCAGCCG +
Preference number: 6 (lower is better)
Translates to: PSARRGCSWADS*RSGWHCATSQP
Trigger: CGGCTGGCTCGTTGCACAGTGCCAGCCGCTCCGGCAAGAGTCAGCCCAGCTACATCCCCTTCTTGCTGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 72 bp CTCATGGCGACAGGCATGACCCCATTCAGCTGTTCCTaGAGAGACTGGCGCGGAGGTGGGCGGGGAGGAGGT +
Preference number: 6 (lower is better)
Translates to: LMATGMTPFSCS*RDWRGGGRGGG
Trigger: ACCTCCTCCCCGCCCACCTCCGCGCCAGTCTCTGCAGGAACAGCTGAATGGGGTCATGCCTGTCGCCATGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CCA 72 bp CACCAAACCCTCAGGCCATCGTGGTGGGGCACCAGGTaGCCGGTCAGCTCAATGCCCGATTCTCTGCAGCGG +
Preference number: 6 (lower is better)
Translates to: HQTLRPSWWGTR*PVSSMPDSLQR
Trigger: CCGCTGCAGAGAATCGGGCATTGAGCTGACCGGCCACCTGGTGCCCCACCACGATGGCCTGAGGGTTTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp GCCCCTGATTCTGGACACCAAACCCTCAGGCCATCGTaGTGGGGCACCAGGTGGCCGGTCAGCTCAATGCCC +
Preference number: 6 (lower is better)
Translates to: APDSGHQTLRPS*WGTRWPVSSMP
Trigger: GGGCATTGAGCTGACCGGCCACCTGGTGCCCCACCACGATGGCCTGAGGGTTTGGTGTCCAGAATCAGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp GCCCTTGTCTCTATCGGAGGCGGTGACTCGGAGAACTaGGGCTCCTGGGGTCACATCCTCCCGCACCTGGAC +
Preference number: 6 (lower is better)
Translates to: ALVSIGGGDSEN*GSWGHILPHLD
Trigger: GTCCAGGTGCGGGAGGATGTGACCCCAGGAGCCCCAGTTCTCCGAGTCACCGCCTCCGATAGAGACAAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp CCCGAGACAGGCCCTTTCTTCTCGAAGCCCTGCCGTTaGGCAGCACAGGAGGCTCGGGCCGACAGGATGTAC +
Preference number: 6 (lower is better)
Translates to: PETGPFFSKPCR*AAQEARADRMY
Trigger: GTACATCCTGTCGGCCCGAGCCTCCTGTGCTGCCCAACGGCAGGGCTTCGAGAAGAAAGGGCCTGTCTCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CAA 72 bp GCAGGGTCGGGACTGGGCTTCCGGCTGCAGGCGAACTaGAGTGCTTTCCGGACCTCCTTGCTGAGCACCACG +
Preference number: 6 (lower is better)
Translates to: AGSGLGFRLQAN*SAFRTSLLSTT
Trigger: CGTGGTGCTCAGCAAGGAGGTCCGGAAAGCACTCAAGTTCGCCTGCAGCCGGAAGCCCAGTCCCGACCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CAA 90 bp GGCCCACCCCCGGGTCCTGGAGGCTGGCCCACCGACAGGCTTACGTaGAGGATATGGCCGCCTGGGGCATCAGTATCCCTTTGCACATTG +
Preference number: 6 (lower is better)
Translates to: GPPPGPGGWPTDRLT*RIWPPGASVSLCTL
Trigger: CAATGTGCAAAGGGATACTGATGCCCCAGGCGGCCATATCCTCAACGTAAGCCTGTCGGTGGGCCAGCCTCCAGGACCCGGGGGTGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp CAGAATGGCATGGCCAGGGCCCCCGCTGGCTCCCAGTaGCAGCTGTGCATGATGCCAGTCACCATCATTGGC +
Preference number: 6 (lower is better)
Translates to: QNGMARAPAGSQ*QLCMMPVTIIG
Trigger: GCCAATGATGGTGACTGGCATCATGCACAGCTGGCACTGGGAGCCAGCGGGGGCCCTGGCCATGCCATTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp CTGATACCCTCAGGTGTCTCGCTTACCCTGACACCCTaGAAACAGCCCCGGAAGCCACGGGCCACTCCGCTG +
Preference number: 6 (lower is better)
Translates to: LIPSGVSLTLTP*KQPRKPRATPL
Trigger: CAGCGGAGTGGCCCGTGGCTTCCGGGGCTGTTTGCAGGGTGTCAGGGTAAGCGAGACACCTGAGGGTATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp GGCCGGTCAGCTCAATGCCCGATTCTCTGCAGCGGCTaGTGTAGAGCCAGAGGTTCGAAGCAGAGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: GRSAQCPILCSG*CRARGSKQRLG
Trigger: GCCCAGCCTCTGCTTCGAACCTCTGGCTCTACACCAGCCGCTGCAGAGAATCGGGCATTGAGCTGACCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp CAAACAGCCCCGGAAGCCACGGGCCACTCCGCTGGCTaGCCCAGGAACTCCCCCGACTGTAATATTGCTCAG +
Preference number: 6 (lower is better)
Translates to: QTAPEATGHSAG*PRNSPDCNIAQ
Trigger: CTGAGCAATATTACAGTCGGGGGAGTTCCTGGGCCAGCCAGCGGAGTGGCCCGTGGCTTCCGGGGCTGTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp CGAACCGCGTGCGGGGCCACCAGATCCCAGCCTCTATaGCCCGTGGGCAGCTGTCGTAATTCACTTCACAGC +
Preference number: 6 (lower is better)
Translates to: RTACGATRSQPL*PVGSCRNSLHS
Trigger: GCTGTGAAGTGAATTACGACAGCTGCCCACGGGCCATAGAGGCTGGGATCTGGTGGCCCCGCACGCGGTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp GCGTGGACTCCTCCCTCAGCAAGAAGGGGATGTAGCTaGGCTGACTCTTGCCGGAGCGGCTGGCACTGTGCA +
Preference number: 6 (lower is better)
Translates to: AWTPPSARRGCS*ADSCRSGWHCA
Trigger: TGCACAGTGCCAGCCGCTCCGGCAAGAGTCAGCCCAGCTACATCCCCTTCTTGCTGAGGGAGGAGTCCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CAA 72 bp CCGGGTCCTGGAGGCTGGCCCACCGACAGGCTTACGTaGAGGATATGGCCGCCTGGGGCATCAGTATCCCTT +
Preference number: 6 (lower is better)
Translates to: PGPGGWPTDRLT*RIWPPGASVSL
Trigger: AAGGGATACTGATGCCCCAGGCGGCCATATCCTCAACGTAAGCCTGTCGGTGGGCCAGCCTCCAGGACCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp CCCAGCAACAAGGGCCCTGTCAGGTCCAGAGACTTCTaGCTGCCTCCTTGGGTGCCCTGGGCAGCACAGGAG +
Preference number: 6 (lower is better)
Translates to: PSNKGPVRSRDF*LPPWVPWAAQE
Trigger: CTCCTGTGCTGCCCAGGGCACCCAAGGAGGCAGCAAGAAGTCTCTGGACCTGACAGGGCCCTTGTTGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp CCGCTGGCTGGCCCAGGAACTCCCCCGACTGTAATATaGCTCAGGTGCAGTCCATGCAGCCGAGGGCCCAGA +
Preference number: 6 (lower is better)
Translates to: PLAGPGTPPTVI*LRCSPCSRGPR
Trigger: TCTGGGCCCTCGGCTGCATGGACTGCACCTGAGCAATATTACAGTCGGGGGAGTTCCTGGGCCAGCCAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp CATGTTGTTGGGCTTGGCCTTCCAAGAACAGGCCGCTaGGGTCCCCTAGGCCAGGGGGAACCTGGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: HVVGLGLPRTGR*GPLGQGEPGQG
Trigger: ACCCTGGCCAGGTTCCCCCTGGCCTAGGGGACCCAAGCGGCCTGTTCTTGGAAGGCCAAGCCCAACAACATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CAA 90 bp CGGGCCACTCCGCTGGCTGGCCCAGGAACTCCCCCGACTGTAATATaGCTCAGGTGCAGTCCATGCAGCCGAGGGCCCAGATTACCCTCT +
Preference number: 6 (lower is better)
Translates to: RATPLAGPGTPPTVI*LRCSPCSRGPRLPS
Trigger: AGAGGGTAATCTGGGCCCTCGGCTGCATGGACTGCACCTGAGCAATATTACAGTCGGGGGAGTTCCTGGGCCAGCCAGCGGAGTGGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp GCCCTGGGGCCTGTGCCAGCTTGCAAGACTGGCATCTaGGCCGTGGGGCCTTTAAGCAAGGGTGCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: ALGPVPACKTGI*AVGPLSKGALQ
Trigger: CTGAAGAGCACCCTTGCTTAAAGGCCCCACGGCTCAGATGCCAGTCTTGCAAGCTGGCACAGGCCCCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp GTAAGCGTGGCCAAGGCACTCCGTCGGGGCATACCGTaGTCCTGTGCAGTGACCCTGAAGACGTGGGTGCTC +
Preference number: 6 (lower is better)
Translates to: VSVAKALRRGIP*SCAVTLKTWVL
Trigger: GAGCACCCACGTCTTCAGGGTCACTGCACAGGATCACGGTATGCCCCGACGGAGTGCCTTGGCCACGCTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp CCGGGGGTGTGGCCAACGTGGCTGCCACGGCCTGAATaGAGAGTCCCAGCAGTGGTGAGAGAAAGCGTTCTG +
Preference number: 6 (lower is better)
Translates to: PGVWPTWLPRPE*RVPAVVRESVL
Trigger: CAGAACGCTTTCTCTCACCACTGCTGGGACTCTTCATTCAGGCCGTGGCAGCCACGTTGGCCACACCCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp GAGCCAAGAGCCGTGTGGCCAGCTGGTAGGCCACCTTaGCATCACTGCCGAAGTAGCCAGAGGTGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: EPRAVWPAGRPP*HHCRSSQRCAG
Trigger: CCCAGCACACCTCTGGCTACTTCGGCAGTGATGTCAAGGTGGCCTACCAGCTGGCCACACGGCTCTTGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 72 bp GCACCAGGTGGCCGGTCAGCTCAATGCCCGATTCTCTaGAGCGGCTGGTGTAGAGCCAGAGGTTCGAAGCAG +
Preference number: 6 (lower is better)
Translates to: APGGRSAQCPIL*SGWCRARGSKQ
Trigger: CTGCTTCGAACCTCTGGCTCTACACCAGCCGCTGCAGAGAATCGGGCATTGAGCTGACCGGCCACCTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp GGCCAAGGCACTCCGTCGGGGCATACCGTGATCCTGTaGAGTGACCCTGAAGACGTGGGTGCTCTTGGTCTC +
Preference number: 6 (lower is better)
Translates to: GQGTPSGHTVIL*SDPEDVGALGL
Trigger: GAGACCAAGAGCACCCACGTCTTCAGGGTCACTGCACAGGATCACGGTATGCCCCGACGGAGTGCCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp CATCCAGACAGAGGCAGGTATAGCCACCCTCTCGGCTaGGGCAGCGCCCATGGGGTCCACAAGGTCTTGAGT +
Preference number: 6 (lower is better)
Translates to: HPDRGRYSHPLG*GSAHGVHKVLS
Trigger: ACTCAAGACCTTGTGGACCCCATGGGCGCTGCCGCAGCCGAGAGGGTGGCTATACCTGCCTCTGTCTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp CTGGCTCAAGACGCAGAGATGACGCCTGGAGCCCTGTaGCCTCCACACTTAGCACTACGTGGCCTGCCCGAA +
Preference number: 6 (lower is better)
Translates to: LAQDAEMTPGAL*PPHLALRGLPE
Trigger: TTCGGGCAGGCCACGTAGTGCTAAGTGTGGAGGGCACAGGGCTCCAGGCGTCATCTCTGCGTCTTGAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp TGGCGTAAGCCTCATAGTGCTGGAGCAGCCAGGCGGTaGCACCCTCTGTCTGCTGGATCAGTTCCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: WRKPHSAGAARR*HPLSAGSVPSA
Trigger: GGCACTGGGAACTGATCCAGCAGACAGAGGGTGGCACCGCCTGGCTGCTCCAGCACTATGAGGCTTACGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 72 bp GTCGGGACTGGGCTTCCGGCTGCAGGCGAACTTGAGTaGTTTCCGGACCTCCTTGCTGAGCACCACGTAGGA +
Preference number: 6 (lower is better)
Translates to: VGTGLPAAGELE*FPDLLAEHHVG
Trigger: TCCTACGTGGTGCTCAGCAAGGAGGTCCGGAAAGCACTCAAGTTCGCCTGCAGCCGGAAGCCCAGTCCCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CCA 72 bp CCTGATTCTGGACACCAAACCCTCAGGCCATCGTGGTaGGGCACCAGGTGGCCGGTCAGCTCAATGCCCGAT +
Preference number: 6 (lower is better)
Translates to: PDSGHQTLRPSW*GTRWPVSSMPD
Trigger: ATCGGGCATTGAGCTGACCGGCCACCTGGTGCCCCACCACGATGGCCTGAGGGTTTGGTGTCCAGAATCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp GACAGTAACTGTCACTTCCATGGGTGTGCGGGCTGGTaGCATGCCCTTGTCCACCGCATAGGCCCGCAGGAC +
Preference number: 6 (lower is better)
Translates to: DSNCHFHGCAGW*HALVHRIGPQD
Trigger: GTCCTGCGGGCCTATGCGGTGGACAAGGGCATGCCACCAGCCCGCACACCCATGGAAGTGACAGTTACTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp CAGGACAGTAACTGTCACTTCCATGGGTGTGCGGGCTaGTGGCATGCCCTTGTCCACCGCATAGGCCCGCAG +
Preference number: 6 (lower is better)
Translates to: QDSNCHFHGCAG*WHALVHRIGPQ
Trigger: CTGCGGGCCTATGCGGTGGACAAGGGCATGCCACCAGCCCGCACACCCATGGAAGTGACAGTTACTGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp AAGCTGTACGTCAGGCTGTCTGAGATATCGGGGTCGTaGGCAGGCACACGGCCTATGGCACCACCGGGGAAG +
Preference number: 6 (lower is better)
Translates to: KLYVRLSEISGS*AGTRPMAPPGK
Trigger: CTTCCCCGGTGGTGCCATAGGCCGTGTGCCTGCCCACGACCCCGATATCTCAGACAGCCTGACGTACAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp ATGAAGGAGCGGGCAGGGAAGCTGCGTGTGGTCACCTaGCAGAAGGGTTTCTCAAAGTCCCCGGAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: MKERAGKLRVVT*QKGFSKSPEGQ
Trigger: CTGCCCCTCCGGGGACTTTGAGAAACCCTTCTGCCAGGTGACCACACGCAGCTTCCCTGCCCGCTCCTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp CGCTCCTTGGTAGCAAACGAGAGGGCCAGGGTGAAGTaGAAGCGCTGGCGCAGGCCACGGAAGGTGATGAAG +
Preference number: 6 (lower is better)
Translates to: RSLVANERARVK*KRWRRPRKVMK
Trigger: CTTCATCACCTTCCGTGGCCTGCGCCAGCGCTTCCACTTCACCCTGGCCCTCTCGTTTGCTACCAAGGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp AGTCAAAGGACAGAATGGCATGGCCAGGGCCCCCGCTaGCTCCCAGTGCCAGCTGTGCATGATGCCAGTCAC +
Preference number: 6 (lower is better)
Translates to: SQRTEWHGQGPR*LPVPAVHDASH
Trigger: GTGACTGGCATCATGCACAGCTGGCACTGGGAGCCAGCGGGGGCCCTGGCCATGCCATTCTGTCCTTTGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp AGGGGATGTAGCTGGGCTGACTCTTGCCGGAGCGGCTaGCACTGTGCAACGAGCCAGCCGAATCTCCGTAAG +
Preference number: 6 (lower is better)
Translates to: RGCSWADSCRSG*HCATSQPNLRK
Trigger: CTTACGGAGATTCGGCTGGCTCGTTGCACAGTGCCAGCCGCTCCGGCAAGAGTCAGCCCAGCTACATCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CAA 72 bp GACACCAGCACACTCATGATGGCTTCCAGGGGCCGGTaGTTGTCCAGTGCCCGGCTCAGTCTCAGCTCACCG +
Preference number: 6 (lower is better)
Translates to: DTSTLMMASRGR*LSSARLSLSSP
Trigger: CGGTGAGCTGAGACTGAGCCGGGCACTGGACAACAACCGGCCCCTGGAAGCCATCATGAGTGTGCTGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 90 bp ACACCATCTGACACCAGCACACTCATGATGGCTTCCAGGGGCCGGTaGTTGTCCAGTGCCCGGCTCAGTCTCAGCTCACCGGTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: TPSDTSTLMMASRGR*LSSARLSLSSPVEA
Trigger: TGCCTCCACCGGTGAGCTGAGACTGAGCCGGGCACTGGACAACAACCGGCCCCTGGAAGCCATCATGAGTGTGCTGGTGTCAGATGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 90 bp CAGCAACAAGGGCCCTGTCAGGTCCAGAGACTTCTTGCTGCCTCCTaGGGTGCCCTGGGCAGCACAGGAGTAGTTGCCCAGCATAGCTCC +
Preference number: 6 (lower is better)
Translates to: QQQGPCQVQRLLAAS*GALGSTGVVAQHSS
Trigger: GGAGCTATGCTGGGCAACTACTCCTGTGCTGCCCAGGGCACCCAAGGAGGCAGCAAGAAGTCTCTGGACCTGACAGGGCCCTTGTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 90 bp GTGCAGTCCATGCAGCCGAGGGCCCAGATTACCCTCTGCCTTCTGTaGCCCATAGTCAAAGGACAGAATGGCATGGCCAGGGCCCCCGCT +
Preference number: 6 (lower is better)
Translates to: VQSMQPRAQITLCLL*PIVKGQNGMARAPA
Trigger: AGCGGGGGCCCTGGCCATGCCATTCTGTCCTTTGACTATGGGCAACAGAAGGCAGAGGGTAATCTGGGCCCTCGGCTGCATGGACTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp CTAGGGCATTGCTGCCCTTGTCTCTATCGGAGGCGGTaGCTCGGAGAACTGGGGCTCCTGGGGTCACATCCT +
Preference number: 6 (lower is better)
Translates to: LGHCCPCLYRRR*LGELGLLGSHP
Trigger: AGGATGTGACCCCAGGAGCCCCAGTTCTCCGAGTCACCGCCTCCGATAGAGACAAGGGCAGCAATGCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp TTGTCCAGAGCCCGCGGCAGGAGTTCCTCGTCGTCGTaGACGCTGATGCTCACCACAGGGGTGTTGATGACG +
Preference number: 6 (lower is better)
Translates to: LSRARGRSSSSS*TLMLTTGVLMT
Trigger: CGTCATCAACACCCCTGTGGTGAGCATCAGCGTTCACGACGACGAGGAACTCCTGCCGCGGGCTCTGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 72 bp GCAACAAGGGCCCTGTCAGGTCCAGAGACTTCTTGCTaGCTCCTTGGGTGCCCTGGGCAGCACAGGAGTAGT +
Preference number: 6 (lower is better)
Translates to: ATRALSGPETSC*LLGCPGQHRSS
Trigger: ACTACTCCTGTGCTGCCCAGGGCACCCAAGGAGGCAGCAAGAAGTCTCTGGACCTGACAGGGCCCTTGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp CTATCCACCTGGAGGTCCTTCATGCAGCCCACAAAGTaGCGCATTCGGACGGGGAAGCTCTCGGGCAGATCC +
Preference number: 6 (lower is better)
Translates to: LSTWRSFMQPTK*RIRTGKLSGRS
Trigger: GGATCTGCCCGAGAGCTTCCCCGTCCGAATGCGGCACTTTGTGGGCTGCATGAAGGACCTCCAGGTGGATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp TGTCGATGTGCCGGCTATCCACCTGGAGGTCCTTCATaGAGCCCACAAAGTGCCGCATTCGGACGGGGAAGC +
Preference number: 6 (lower is better)
Translates to: CRCAGYPPGGPS*SPQSAAFGRGS
Trigger: GCTTCCCCGTCCGAATGCGGCACTTTGTGGGCTGCATGAAGGACCTCCAGGTGGATAGCCGGCACATCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp TCCAGCCAGGGTGTGGTAGATGATGACACTGGCCACTaGCTCTCCCTGACTCAGTTCTGGGTGCCTCCGCTG +
Preference number: 6 (lower is better)
Translates to: SSQGVVDDDTGH*LSLTQFWVPPL
Trigger: CAGCGGAGGCACCCAGAACTGAGTCAGGGAGAGGCAGTGGCCAGTGTCATCATCTACCACACCCTGGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CCA 72 bp CATTATCATCCTCCACCGACAGGAAAACAATGGCTGTaGAACTCCGCGGGCCTGGGTCCCGGCCCTGGTCAC +
Preference number: 6 (lower is better)
Translates to: HYHPPPTGKQWL*NSAGLGPGPGH
Trigger: GTGACCAGGGCCGGGACCCAGGCCCGCGGAGTTCCACAGCCATTGTTTTCCTGTCGGTGGAGGATGATAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp TGGATTCGAGTCACAGGGATCTGGCCAGCTACAGCCTaGCTCCACATTGATGCTCTCCCCGCGGCTGGGATC +
Preference number: 6 (lower is better)
Translates to: WIRVTGIWPATA*LHIDALPAAGI
Trigger: GATCCCAGCCGCGGGGAGAGCATCAATGTGGAGCCAGGCTGTAGCTGGCCAGATCCCTGTGACTCGAATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp TTAGGTAGGTGTGCCGCATATTCTGGGCAAGGGCGCTaGCGTAAGCCTCATAGTGCTGGAGCAGCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: LGRCAAYSGQGR*RKPHSAGAARR
Trigger: CCGCCTGGCTGCTCCAGCACTATGAGGCTTACGCCAGCGCCCTTGCCCAGAATATGCGGCACACCTACCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CAA 72 bp GCGATGACTGTACAGGCAAAAGGGAGGTCAGCCTGGTaGATGCCCAGGAGAAAGACCAGCTGGGCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: AMTVQAKGRSAW*MPRRKTSWARP
Trigger: GGGCCTGGCCCAGCTGGTCTTTCTCCTGGGCATCAACCAGGCTGACCTCCCTTTTGCCTGTACAGTCATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS TCA 72 bp GCATCAGTATCCCTTTGCACATTGAAGACCACCACATaGTCCGGGGGTGTGGCCAACGTGGCTGCCACGGCC +
Preference number: 6 (lower is better)
Translates to: ASVSLCTLKTTT*SGGVANVAATA
Trigger: GGCCGTGGCAGCCACGTTGGCCACACCCCCGGATCATGTGGTGGTCTTCAATGTGCAAAGGGATACTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp TGGTGGGGCAGCCAGGCACAGTGCCATTGTTGGCAATaGAGTCGGCCATGTCGATGTGCCGGCTATCCACCT +
Preference number: 6 (lower is better)
Translates to: WWGSQAQCHCWQ*SRPCRCAGYPP
Trigger: AGGTGGATAGCCGGCACATCGACATGGCCGACTTCATTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp GACTGGCATCTGAGCCGTGGGGCCTTTAAGCAAGGGTaGTCTTCAGGCAGGGTCAGCGTGCCTTGTGGAGAA +
Preference number: 6 (lower is better)
Translates to: DWHLSRGAFKQG*SSGRVSVPCGE
Trigger: TTCTCCACAAGGCACGCTGACCCTGCCTGAAGAGCACCCTTGCTTAAAGGCCCCACGGCTCAGATGCCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp CAGCCTGTGCCATTGTTAATGGTGAAGGGAAAGTCGTaGCCAACCCCTGCCAGGCTATACTCGAGGCGGGCG +
Preference number: 6 (lower is better)
Translates to: QPVPLLMVKGKS*PTPARLYSRRA
Trigger: CGCCCGCCTCGAGTATAGCCTGGCAGGGGTTGGGCACGACTTTCCCTTCACCATTAACAATGGCACAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp TGGGAGCGTCCTGAGTCCAGGCCTGATTCGTTCCTCTaGAGCCGCTCAGCGAAGCCCTTTAGCTCTGAGAAG +
Preference number: 6 (lower is better)
Translates to: WERPESRPDSFL*SRSAKPFSSEK
Trigger: CTTCTCAGAGCTAAAGGGCTTCGCTGAGCGGCTGCAGAGGAACGAATCAGGCCTGGACTCAGGACGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CCA 72 bp CAGCAGGCTGGTTCTCAGGCACTGTGGCCTGGTAGCTaGGAGGCTGGAACTGGGGAGCTGTATTCACATTCC +
Preference number: 6 (lower is better)
Translates to: QQAGSQALWPGS*EAGTGELYSHS
Trigger: GGAATGTGAATACAGCTCCCCAGTTCCAGCCTCCCAGCTACCAGGCCACAGTGCCTGAGAACCAGCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp ACGGGCGGGTTATCATTGCGGTCAAGGAGGCGGACATaGACAGTAGCCCTGCTCACCAAGGGAGCAGACGTA +
Preference number: 6 (lower is better)
Translates to: TGGLSLRSRRRT*TVALLTKGADV
Trigger: TACGTCTGCTCCCTTGGTGAGCAGGGCTACTGTCCATGTCCGCCTCCTTGACCGCAATGATAACCCGCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp GGAGGCTGGCCCACCGACAGGCTTACGTTGAGGATATaGCCGCCTGGGGCATCAGTATCCCTTTGCACATTG +
Preference number: 6 (lower is better)
Translates to: GGWPTDRLTLRI*PPGASVSLCTL
Trigger: CAATGTGCAAAGGGATACTGATGCCCCAGGCGGCCATATCCTCAACGTAAGCCTGTCGGTGGGCCAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp CCAGTGCCAGCTGTGCATGATGCCAGTCACCATCATTaGCTCGGCCTGGCTCAAGACGCAGAGATGACGCCT +
Preference number: 6 (lower is better)
Translates to: PVPAVHDASHHH*LGLAQDAEMTP
Trigger: AGGCGTCATCTCTGCGTCTTGAGCCAGGCCGAGCCAATGATGGTGACTGGCATCATGCACAGCTGGCACTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp AGTGCCCGGCTCAGTCTCAGCTCACCGGTGGAGGCATaGAGCAGGACCAAGCTGAGTTCATTTCCTCGCTCG +
Preference number: 6 (lower is better)
Translates to: SARLSLSSPVEA*SRTKLSSFPRS
Trigger: CGAGCGAGGAAATGAACTCAGCTTGGTCCTGCTCAATGCCTCCACCGGTGAGCTGAGACTGAGCCGGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp TCAGAGCCAGAGGAGTCCTCATCCACCGTGCCTGCCTaGATGCTCATGGCGACAGGCATGACCCCATTCAGC +
Preference number: 6 (lower is better)
Translates to: SEPEESSSTVPA*MLMATGMTPFS
Trigger: GCTGAATGGGGTCATGCCTGTCGCCATGAGCATCAAGGCAGGCACGGTGGATGAGGACTCCTCTGGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CAA 90 bp TCGCACACGATCTTCTTGGTGGGGCAGCCAGGCACAGTGCCATTGTaGGCAATGAAGTCGGCCATGTCGATGTGCCGGCTATCCACCTGG +
Preference number: 6 (lower is better)
Translates to: SHTIFLVGQPGTVPL*AMKSAMSMCRLSTW
Trigger: CCAGGTGGATAGCCGGCACATCGACATGGCCGACTTCATTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGATCGTGTGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 90 bp CTGTCGCACACGATCTTCTTGGTGGGGCAGCCAGGCACAGTGCCATaGTTGGCAATGAAGTCGGCCATGTCGATGTGCCGGCTATCCACC +
Preference number: 6 (lower is better)
Translates to: LSHTIFLVGQPGTVP*LAMKSAMSMCRLST
Trigger: GGTGGATAGCCGGCACATCGACATGGCCGACTTCATTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGATCGTGTGCGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 90 bp GACGGCCACCGTCCTGAGCCCGGATCCGAAGCGTATACTCTTTGGTaGTCTCATAGTCGAGTGGGCTTACCACATCCAGGGCTCCAGTCT +
Preference number: 6 (lower is better)
Translates to: DGHRPEPGSEAYTLW*SHSRVGLPHPGLQS
Trigger: AGACTGGAGCCCTGGATGTGGTAAGCCCACTCGACTATGAGACAACCAAAGAGTATACGCTTCGGATCCGGGCTCAGGACGGTGGCCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 90 bp CAGGTGCCACCGTTGTGGCAAATGCTGCTGTCGCACACGATCTTCTaGGTGGGGCAGCCAGGCACAGTGCCATTGTTGGCAATGAAGTCG +
Preference number: 6 (lower is better)
Translates to: QVPPLWQMLLSHTIF*VGQPGTVPLLAMKS
Trigger: CGACTTCATTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGATCGTGTGCGACAGCAGCATTTGCCACAACGGTGGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 90 bp CACTCGCAGCTGAACGCATTCCACTGGTTCACACAGGTGCCACCGTaGTGGCAAATGCTGCTGTCGCACACGATCTTCTTGGTGGGGCAG +
Preference number: 6 (lower is better)
Translates to: HSQLNAFHWFTQVPP*WQMLLSHTIFLVGQ
Trigger: CTGCCCCACCAAGAAGATCGTGTGCGACAGCAGCATTTGCCACAACGGTGGCACCTGTGTGAACCAGTGGAATGCGTTCAGCTGCGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 90 bp TCTCCCGTGGCCGCTCTTCAAGGGGCCCACTACCACTATTCTCCTTaGTTGTGGTCCCAAAGTCTCCCAGCCAAGGGACCTTCCCAGAAC +
Preference number: 6 (lower is better)
Translates to: SPVAALQGAHYHYSP*LWSQSLPAKGPSQN
Trigger: GTTCTGGGAAGGTCCCTTGGCTGGGAGACTTTGGGACCACAACAAAGGAGAATAGTGGTAGTGGGCCCCTTGAAGAGCGGCCACGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS TCA 72 bp GCCTTCAGAGGATGGCGGAAGAGGGATATGAGCCCCTaGTTCTGGACACCAAACCCTCAGGCCATCGTGGTG +
Preference number: 6 (lower is better)
Translates to: AFRGWRKRDMSP*FWTPNPQAIVV
Trigger: CACCACGATGGCCTGAGGGTTTGGTGTCCAGAATCAGGGGCTCATATCCCTCTTCCGCCATCCTCTGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp CCAGAGACATTGGAGAGTGGAGGACGGCCACCGTCCTaGGCCCGGATCCGAAGCGTATACTCTTTGGTTGTC +
Preference number: 6 (lower is better)
Translates to: PETLESGGRPPS*ARIRSVYSLVV
Trigger: GACAACCAAAGAGTATACGCTTCGGATCCGGGCTCAGGACGGTGGCCGTCCTCCACTCTCCAATGTCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp TCACACTGTGGACACCATCTGACACCAGCACACTCATaGTGGCTTCCAGGGGCCGGTTGTTGTCCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: SHCGHHLTPAHS*WLPGAGCCPVP
Trigger: GGGCACTGGACAACAACCGGCCCCTGGAAGCCATCATGAGTGTGCTGGTGTCAGATGGTGTCCACAGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp TCACTCAGAGCCAGAGGAGTCCTCATCCACCGTGCCTaGCTTGATGCTCATGGCGACAGGCATGACCCCATT +
Preference number: 6 (lower is better)
Translates to: SLRARGVLIHRA*LDAHGDRHDPI
Trigger: AATGGGGTCATGCCTGTCGCCATGAGCATCAAGGCAGGCACGGTGGATGAGGACTCCTCTGGCTCTGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147251.2
CDS CCA 72 bp TGTCTAGGACTTGCACTGTTACTAGGCCAGAGACATTaGAGAGTGGAGGACGGCCACCGTCCTGAGCCCGGA +
Preference number: 6 (lower is better)
Translates to: CLGLALLLGQRH*RVEDGHRPEPG
Trigger: TCCGGGCTCAGGACGGTGGCCGTCCTCCACTCTCCAATGTCTCTGGCCTAGTAACAGTGCAAGTCCTAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp CGTCCTCGGGGTCACAGACTCGGGACAAAGAACCAGTaGGGTAACAGTCACACAAGAGACAAGTGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: RPRGHRLGTKNQ*GNSHTRDKWGC
Trigger: GCAGCCCCACTTGTCTCTTGTGTGACTGTTACCCCACTGGTTCTTTGTCCCGAGTCTGTGACCCCGAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp AGGTCACTGTCAGAGTCCGTGTCGGGATCATGTTGTTaGGCTTGGCCTTCCAAGAACAGGCCGCTTGGGTCC +
Preference number: 6 (lower is better)
Translates to: RSLSESVSGSCC*AWPSKNRPLGS
Trigger: GGACCCAAGCGGCCTGTTCTTGGAAGGCCAAGCCCAACAACATGATCCCGACACGGACTCTGACAGTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CAA 72 bp CCTCCCACCAACAGGTTGACACAGGTACCCCCGTTCTaGCAGACACCTGGAGTACAACGGCCTGAGTGGGTA +
Preference number: 6 (lower is better)
Translates to: PPTNRLTQVPPF*QTPGVQRPEWV
Trigger: TACCCACTCAGGCCGTTGTACTCCAGGTGTCTGCAAGAACGGGGGTACCTGTGTCAACCTGTTGGTGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp ACGATCTTCTTGGTGGGGCAGCCAGGCACAGTGCCATaGTTGGCAATGAAGTCGGCCATGTCGATGTGCCGG +
Preference number: 6 (lower is better)
Translates to: TIFLVGQPGTVP*LAMKSAMSMCR
Trigger: CCGGCACATCGACATGGCCGACTTCATTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp CCGTTGTGGCAAATGCTGCTGTCGCACACGATCTTCTaGGTGGGGCAGCCAGGCACAGTGCCATTGTTGGCA +
Preference number: 6 (lower is better)
Translates to: PLWQMLLSHTIF*VGQPGTVPLLA
Trigger: TGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGATCGTGTGCGACAGCAGCATTTGCCACAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp CAGGTCACTGTCAGAGTCCGTGTCGGGATCATGTTGTaGGGCTTGGCCTTCCAAGAACAGGCCGCTTGGGTC +
Preference number: 6 (lower is better)
Translates to: QVTVRVRVGIML*GLAFQEQAAWV
Trigger: GACCCAAGCGGCCTGTTCTTGGAAGGCCAAGCCCAACAACATGATCCCGACACGGACTCTGACAGTGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CAA 90 bp TCTTCCCGATCCAACTCTGCGGCCACAGAGATCCAGCCTGTGCCATaGTTAATGGTGAAGGGAAAGTCGTGCCCAACCCCTGCCAGGCTA +
Preference number: 6 (lower is better)
Translates to: SSRSNSAATEIQPVP*LMVKGKSCPTPARL
Trigger: TAGCCTGGCAGGGGTTGGGCACGACTTTCCCTTCACCATTAACAATGGCACAGGCTGGATCTCTGTGGCCGCAGAGTTGGATCGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 90 bp CAGGCTTACGTTGAGGATATGGCCGCCTGGGGCATCAGTATCCCTTaGCACATTGAAGACCACCACATGATCCGGGGGTGTGGCCAACGT +
Preference number: 6 (lower is better)
Translates to: QAYVEDMAAWGISIP*HIEDHHMIRGCGQR
Trigger: ACGTTGGCCACACCCCCGGATCATGTGGTGGTCTTCAATGTGCAAAGGGATACTGATGCCCCAGGCGGCCATATCCTCAACGTAAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp CACTACTATCTGAGCTGTGTCCTGCCTTGTGCCATCTaGGGCAGTCACTGCCAGCACATACTGCCGCTCGAG +
Preference number: 6 (lower is better)
Translates to: HYYLSCVLPCAI*GSHCQHILPLE
Trigger: CTCGAGCGGCAGTATGTGCTGGCAGTGACTGCCTCAGATGGCACAAGGCAGGACACAGCTCAGATAGTAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp ATGGTGGGCAGACACTTCTTCTTGAGGATGCCTTTGTaGGGTTGGGTAGAAGGGCCCGGAAGGGGTCCCAGA +
Preference number: 6 (lower is better)
Translates to: MVGRHFFLRMPL*GWVEGPGRGPR
Trigger: TCTGGGACCCCTTCCGGGCCCTTCTACCCAACCTCACAAAGGCATCCTCAAGAAGAAGTGTCTGCCCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 72 bp GTGCAGTCCATGCAGCCGAGGGCCCAGATTACCCTCTaGCTTCTGTTGCCCATAGTCAAAGGACAGAATGGC +
Preference number: 6 (lower is better)
Translates to: VQSMQPRAQITL*LLLPIVKGQNG
Trigger: GCCATTCTGTCCTTTGACTATGGGCAACAGAAGGCAGAGGGTAATCTGGGCCCTCGGCTGCATGGACTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp ACTCCCCCGACTGTAATATTGCTCAGGTGCAGTCCATaGAGCCGAGGGCCCAGATTACCCTCTGCCTTCTGT +
Preference number: 6 (lower is better)
Translates to: TPPTVILLRCSP*SRGPRLPSAFC
Trigger: ACAGAAGGCAGAGGGTAATCTGGGCCCTCGGCTGCATGGACTGCACCTGAGCAATATTACAGTCGGGGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp ATCCGTGGCGCTGATCAGCACCACTGTGGTGCCTGCTaGCCGGTCTTCATTAACGTTGACTGTGTAGTGGGA +
Preference number: 6 (lower is better)
Translates to: IRGADQHHCGAC*PVFINVDCVVG
Trigger: TCCCACTACACAGTCAACGTTAATGAAGACCGGCCAGCAGGCACCACAGTGGTGCTGATCAGCGCCACGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp GCCCACCGACAGGCTTACGTTGAGGATATGGCCGCCTaGGGCATCAGTATCCCTTTGCACATTGAAGACCAC +
Preference number: 6 (lower is better)
Translates to: AHRQAYVEDMAA*GISIPLHIEDH
Trigger: GTGGTCTTCAATGTGCAAAGGGATACTGATGCCCCAGGCGGCCATATCCTCAACGTAAGCCTGTCGGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp ATGAAGTCGGCCATGTCGATGTGCCGGCTATCCACCTaGAGGTCCTTCATGCAGCCCACAAAGTGCCGCATT +
Preference number: 6 (lower is better)
Translates to: MKSAMSMCRLST*RSFMQPTKCRI
Trigger: AATGCGGCACTTTGTGGGCTGCATGAAGGACCTCCAGGTGGATAGCCGGCACATCGACATGGCCGACTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp CGTTGTGGCAAATGCTGCTGTCGCACACGATCTTCTTaGTGGGGCAGCCAGGCACAGTGCCATTGTTGGCAA +
Preference number: 6 (lower is better)
Translates to: RCGKCCCRTRSS*WGSQAQCHCWQ
Trigger: TTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGATCGTGTGCGACAGCAGCATTTGCCACAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp GTCCCAGTCATTGCTGCAGTAGCTGTTGGTAGGGCATaGATTCGAGTCACAGGGATCTGGCCAGCTACAGCC +
Preference number: 6 (lower is better)
Translates to: VPVIAAVAVGRA*IRVTGIWPATA
Trigger: GGCTGTAGCTGGCCAGATCCCTGTGACTCGAATCCATGCCCTACCAACAGCTACTGCAGCAATGACTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp GCAAAGCTTGTCATATGGTTGCACTGGCAGCTGACGTaGCTCTCGTTACGGAAGACGACTTCGCAGCCTCGG +
Preference number: 6 (lower is better)
Translates to: AKLVIWLHWQLT*LSLRKTTSQPR
Trigger: CCGAGGCTGCGAAGTCGTCTTCCGTAACGAGAGCCACGTCAGCTGCCAGTGCAACCATATGACAAGCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CAA 72 bp AGAATCTCAAAGTTGCCCAGCACGGGCGGGTTATCATaGCGGTCAAGGAGGCGGACATGGACAGTAGCCCTG +
Preference number: 6 (lower is better)
Translates to: RISKLPSTGGLS*RSRRRTWTVAL
Trigger: CAGGGCTACTGTCCATGTCCGCCTCCTTGACCGCAATGATAACCCGCCCGTGCTGGGCAACTTTGAGATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp ATCTTCTTGGTGGGGCAGCCAGGCACAGTGCCATTGTaGGCAATGAAGTCGGCCATGTCGATGTGCCGGCTA +
Preference number: 6 (lower is better)
Translates to: IFLVGQPGTVPL*AMKSAMSMCRL
Trigger: TAGCCGGCACATCGACATGGCCGACTTCATTGCCAACAATGGCACTGTGCCTGGCTGCCCCACCAAGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp GCCGCTCTTCAAGGGGCCCACTACCACTATTCTCCTTaGTTGTGGTCCCAAAGTCTCCCAGCCAAGGGACCT +
Preference number: 6 (lower is better)
Translates to: AALQGAHYHYSP*LWSQSLPAKGP
Trigger: AGGTCCCTTGGCTGGGAGACTTTGGGACCACAACAAAGGAGAATAGTGGTAGTGGGCCCCTTGAAGAGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CAA 90 bp AAGAGAAATTCAGAGCCAGAGGAGTCCTCATCCACCGTGCCTGCCTaGATGCTCATGGCGACAGGCATGACCCCATTCAGCTGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: KRNSEPEESSSTVPA*MLMATGMTPFSCSC
Trigger: GCAGGAACAGCTGAATGGGGTCATGCCTGTCGCCATGAGCATCAAGGCAGGCACGGTGGATGAGGACTCCTCTGGCTCTGAATTTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp GCACAGCAAAGCTTGTCATATGGTTGCACTGGCAGCTaGCGTGGCTCTCGTTACGGAAGACGACTTCGCAGC +
Preference number: 6 (lower is better)
Translates to: AQQSLSYGCTGS*RGSRYGRRLRS
Trigger: GCTGCGAAGTCGTCTTCCGTAACGAGAGCCACGTCAGCTGCCAGTGCAACCATATGACAAGCTTTGCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS GCA 72 bp ATTGTTAATGGTGAAGGGAAAGTCGTGCCCAACCCCTaGCAGGCTATACTCGAGGCGGGCGTTATCACCAGC +
Preference number: 6 (lower is better)
Translates to: IVNGEGKVVPNP*QAILEAGVITS
Trigger: GCTGGTGATAACGCCCGCCTCGAGTATAGCCTGGCAGGGGTTGGGCACGACTTTCCCTTCACCATTAACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp AAATTCAGAGCCAGAGGAGTCCTCATCCACCGTGCCTaGCTTGATGCTCATGGCGACAGGCATGACCCCATT +
Preference number: 6 (lower is better)
Translates to: KFRARGVLIHRA*LDAHGDRHDPI
Trigger: AATGGGGTCATGCCTGTCGCCATGAGCATCAAGGCAGGCACGGTGGATGAGGACTCCTCTGGCTCTGAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp ATGGTGACACGTAGCGAGCACTGGGCTGTCACACTGTaGACACCATCTGACACCAGCACACTCATGATGGCT +
Preference number: 6 (lower is better)
Translates to: MVTRSEHWAVTL*TPSDTSTLMMA
Trigger: AGCCATCATGAGTGTGCTGGTGTCAGATGGTGTCCACAGTGTGACAGCCCAGTGCTCGCTACGTGTCACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp CGTCCTGAGCCCGGATCCGAAGCGTATACTCTTTGGTaGTCTCATAGTCGAGTGGGCTTACCACATCCAGGG +
Preference number: 6 (lower is better)
Translates to: RPEPGSEAYTLW*SHSRVGLPHPG
Trigger: CCCTGGATGTGGTAAGCCCACTCGACTATGAGACAACCAAAGAGTATACGCTTCGGATCCGGGCTCAGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp TCCAACTCTGCGGCCACAGAGATCCAGCCTGTGCCATaGTTAATGGTGAAGGGAAAGTCGTGCCCAACCCCT +
Preference number: 6 (lower is better)
Translates to: SNSAATEIQPVP*LMVKGKSCPTP
Trigger: AGGGGTTGGGCACGACTTTCCCTTCACCATTAACAATGGCACAGGCTGGATCTCTGTGGCCGCAGAGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 90 bp CATTTGAAACCTCCCACCAACAGGTTGACACAGGTACCCCCGTTCTaGCAGACACCTGGAGTACAACGGCCTGAGTGGGTACTCGCTTCA +
Preference number: 6 (lower is better)
Translates to: HLKPPTNRLTQVPPF*QTPGVQRPEWVLAS
Trigger: TGAAGCGAGTACCCACTCAGGCCGTTGTACTCCAGGTGTCTGCAAGAACGGGGGTACCTGTGTCAACCTGTTGGTGGGAGGTTTCAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp CATCCAGATAGAACTGGCCCCGAGCATTGCCACTCATaGTGCTGTAGTGCACTAGGGCATTGCTGCCCTTGT +
Preference number: 6 (lower is better)
Translates to: HPDRTGPEHCHS*CCSALGHCCPC
Trigger: ACAAGGGCAGCAATGCCCTAGTGCACTACAGCATCATGAGTGGCAATGCTCGGGGCCAGTTCTATCTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp AGCAGAGCCCAGGAGAAGGTGCAGAGGTACAGGAAATaGAGCAGGATAGCGATGACTGTACAGGCAAAAGGG +
Preference number: 6 (lower is better)
Translates to: SRAQEKVQRYRK*SRIAMTVQAKG
Trigger: CCCTTTTGCCTGTACAGTCATCGCTATCCTGCTGCATTTCCTGTACCTCTGCACCTTCTCCTGGGCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CCA 72 bp ACTCAAGTCGACCCGCCTCACCCTCATCTGGATCAATaGCTCTTAAGGATGCAACAGAGGTACCAGCAGGCT +
Preference number: 6 (lower is better)
Translates to: TQVDPPHPHLDQ*LLRMQQRYQQA
Trigger: AGCCTGCTGGTACCTCTGTTGCATCCTTAAGAGCCATTGATCCAGATGAGGGTGAGGCGGGTCGACTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp CACCGTCCTGAGCCCGGATCCGAAGCGTATACTCTTTaGTTGTCTCATAGTCGAGTGGGCTTACCACATCCA +
Preference number: 6 (lower is better)
Translates to: HRPEPGSEAYTL*LSHSRVGLPHP
Trigger: TGGATGTGGTAAGCCCACTCGACTATGAGACAACCAAAGAGTATACGCTTCGGATCCGGGCTCAGGACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp CCGTGGGGTGTATTGGGTTTTCGGGTACACACGGACTaGTGCTCGCATGGGTTCAGGTCACACACATTTGTA +
Preference number: 6 (lower is better)
Translates to: PWGVLGFRVHTD*CSHGFRSHTFV
Trigger: TACAAATGTGTGTGACCTGAACCCATGCGAGCACCAGTCCGTGTGTACCCGAAAACCCAATACACCCCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp TTGGTAAACACTCGCAGATGTAGCCGTGGGGTGTATTaGGTTTTCGGGTACACACGGACTGGTGCTCGCATG +
Preference number: 6 (lower is better)
Translates to: LVNTRRCSRGVY*VFGYTRTGARM
Trigger: CATGCGAGCACCAGTCCGTGTGTACCCGAAAACCCAATACACCCCACGGCTACATCTGCGAGTGTTTACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp AAGGGTTTCTCAAAGTCCCCGGAGGGGCAGTCACATTaGAAACCTCCCACCAACAGGTTGACACAGGTACCC +
Preference number: 6 (lower is better)
Translates to: KGFSKSPEGQSH*KPPTNRLTQVP
Trigger: GGGTACCTGTGTCAACCTGTTGGTGGGAGGTTTCAAATGTGACTGCCCCTCCGGGGACTTTGAGAAACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 90 bp TTGTTAAAGAGAATCTCAAAGTTGCCCAGCACGGGCGGGTTATCATaGCGGTCAAGGAGGCGGACATGGACAGTAGCCCTGCTCACCAAG +
Preference number: 6 (lower is better)
Translates to: LLKRISKLPSTGGLS*RSRRRTWTVALLTK
Trigger: CTTGGTGAGCAGGGCTACTGTCCATGTCCGCCTCCTTGACCGCAATGATAACCCGCCCGTGCTGGGCAACTTTGAGATTCTCTTTAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS GCA 72 bp TGGGGTGTATTGGGTTTTCGGGTACACACGGACTGGTaGTCGCATGGGTTCAGGTCACACACATTTGTACAG +
Preference number: 6 (lower is better)
Translates to: WGVLGFRVHTDW*SHGFRSHTFVQ
Trigger: CTGTACAAATGTGTGTGACCTGAACCCATGCGAGCACCAGTCCGTGTGTACCCGAAAACCCAATACACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp AGAAATGATTGGAGCGGCTATCAAAGAGGGCATCCATaGTGTACTCAAGTCGACCCGCCTCACCCTCATCTG +
Preference number: 6 (lower is better)
Translates to: RNDWSGYQRGHP*CTQVDPPHPHL
Trigger: CAGATGAGGGTGAGGCGGGTCGACTTGAGTACACCATGGATGCCCTCTTTGATAGCCGCTCCAATCATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp ATCCAGCTCCTCAGCTGTGGTGACAACACCGGTGATTaGGTCCAAGGAGAAGAAATGATTGGAGCGGCTATC +
Preference number: 6 (lower is better)
Translates to: IQLLSCGDNTGD*VQGEEMIGAAI
Trigger: GATAGCCGCTCCAATCATTTCTTCTCCTTGGACCCAATCACCGGTGTTGTCACCACAGCTGAGGAGCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 90 bp CGATGTCGACTCTACAATAAAGTCACCGTCCCCATCATCTCCTCCTaGGAAGGTGTAGAAAACCCTGCCATTCAGACCGGAGTCTCGATC +
Preference number: 6 (lower is better)
Translates to: RCRLYNKVTVPIISS*EGVENPAIQTGVSI
Trigger: GATCGAGACTCCGGTCTGAATGGCAGGGTTTTCTACACCTTCCAAGGAGGAGATGATGGGGACGGTGACTTTATTGTAGAGTCGACATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 90 bp TCTCGTCGTGACATATCCATAAGCACAGCAAAGCTTGTCATATGGTaGCACTGGCAGCTGACGTGGCTCTCGTTACGGAAGACGACTTCG +
Preference number: 6 (lower is better)
Translates to: SRRDISISTAKLVIW*HWQLTWLSLRKTTS
Trigger: CGAAGTCGTCTTCCGTAACGAGAGCCACGTCAGCTGCCAGTGCAACCATATGACAAGCTTTGCTGTGCTTATGGATATGTCACGACGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS TCA 72 bp GTGACAACACCGGTGATTGGGTCCAAGGAGAAGAAATaGTTGGAGCGGCTATCAAAGAGGGCATCCATGGTG +
Preference number: 6 (lower is better)
Translates to: VTTPVIGSKEKK*LERLSKRASMV
Trigger: CACCATGGATGCCCTCTTTGATAGCCGCTCCAATCATTTCTTCTCCTTGGACCCAATCACCGGTGTTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp ATTGGGTTTTCGGGTACACACGGACTGGTGCTCGCATaGGTTCAGGTCACACACATTTGTACAGTTGTCACC +
Preference number: 6 (lower is better)
Translates to: IGFSGTHGLVLA*VQVTHICTVVT
Trigger: GGTGACAACTGTACAAATGTGTGTGACCTGAACCCATGCGAGCACCAGTCCGTGTGTACCCGAAAACCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp TGGAAAGGGGTGCTGACAAAGATGGGGGCGTTATCGTaGATGTCTAGGACTTGCACTGTTACTAGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: WKGVLTKMGALS*MSRTCTVTRPE
Trigger: CTCTGGCCTAGTAACAGTGCAAGTCCTAGACATCAACGATAACGCCCCCATCTTTGTCAGCACCCCTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CCA 72 bp GTACAGGAAGACACTCATCGAAACAGCAAAGGCCACTaGTCCAGCAAAGCTCCAGATGAGGGTATCATAGAC +
Preference number: 6 (lower is better)
Translates to: VQEDTHRNSKGH*SSKAPDEGIID
Trigger: GTCTATGATACCCTCATCTGGAGCTTTGCTGGACCAGTGGCCTTTGCTGTTTCGATGAGTGTCTTCCTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CAA 72 bp CTCTACAATAAAGTCACCGTCCCCATCATCTCCTCCTaGGAAGGTGTAGAAAACCCTGCCATTCAGACCGGA +
Preference number: 6 (lower is better)
Translates to: LYNKVTVPIISS*EGVENPAIQTG
Trigger: TCCGGTCTGAATGGCAGGGTTTTCTACACCTTCCAAGGAGGAGATGATGGGGACGGTGACTTTATTGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp CGGACTGGTGCTCGCATGGGTTCAGGTCACACACATTaGTACAGTTGTCACCATAGTAACCTAGAACACAGC +
Preference number: 6 (lower is better)
Translates to: RTGARMGSGHTH*YSCHHSNLEHS
Trigger: GCTGTGTTCTAGGTTACTATGGTGACAACTGTACAAATGTGTGTGACCTGAACCCATGCGAGCACCAGTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp GACATATCCATAAGCACAGCAAAGCTTGTCATATGGTaGCACTGGCAGCTGACGTGGCTCTCGTTACGGAAG +
Preference number: 6 (lower is better)
Translates to: DISISTAKLVIW*HWQLTWLSLRK
Trigger: CTTCCGTAACGAGAGCCACGTCAGCTGCCAGTGCAACCATATGACAAGCTTTGCTGTGCTTATGGATATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2
CDS CAA 90 bp GGCAAGGTTGGTCAATCCTGGTCTCACAATATGGCCCAAGGTAATTaGGTAAACACTCGCAGATGTAGCCGTGGGGTGTATTGGGTTTTC +
Preference number: 6 (lower is better)
Translates to: GKVGQSWSHNMAQGN*VNTRRCSRGVYWVF
Trigger: GAAAACCCAATACACCCCACGGCTACATCTGCGAGTGTTTACCAAATTACCTTGGGCCATATTGTGAGACCAGGATTGACCAACCTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 72 bp GGTCAATCCTGGTCTCACAATATGGCCCAAGGTAATTaGGTAAACACTCGCAGATGTAGCCGTGGGGTGTAT +
Preference number: 6 (lower is better)
Translates to: GQSWSHNMAQGN*VNTRRCSRGVY
Trigger: ATACACCCCACGGCTACATCTGCGAGTGTTTACCAAATTACCTTGGGCCATATTGTGAGACCAGGATTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS CAA 90 bp GGGTACACACGGACTGGTGCTCGCATGGGTTCAGGTCACACACATTaGTACAGTTGTCACCATAGTAACCTAGAACACAGCTACAAGAAT +
Preference number: 6 (lower is better)
Translates to: GYTRTGARMGSGHTH*YSCHHSNLEHSYKN
Trigger: ATTCTTGTAGCTGTGTTCTAGGTTACTATGGTGACAACTGTACAAATGTGTGTGACCTGAACCCATGCGAGCACCAGTCCGTGTGTACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090558.11
CDS TCA 72 bp GGTCTTCAGTGGCAAGATCTCACCGTTCTCTCGTCGTaGCATATCCATAAGCACAGCAAAGCTTGTCATATG +
Preference number: 6 (lower is better)
Translates to: GLQWQDLTVLSS*HIHKHSKACHM
Trigger: CATATGACAAGCTTTGCTGTGCTTATGGATATGTCACGACGAGAGAACGGTGAGATCTTGCCACTGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090558.11
ENSMUST00000147251.2