RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CELSR1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000016028

Ensembl transcript IDs: ENSMUST00000016172.10, ENSMUST00000226204.3, ENSMUST00000226840.2, ENSMUST00000239396.2, ENSMUST00000239489.2

Found 649 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGTCTGGGCCCTGAGCTCCTATGAGGGTCAAGGGCTTCCCGTCTaGACGGTCTGCGTAGAGCCAGCTGCTATGGCAGGGACCCTCACA +
Preference number: 1 (lower is better)
Translates to: RVWALSSYEGQGLPV*TVCVEPAAMAGTLT
Trigger: TGTGAGGGTCCCTGCCATAGCAGCTGGCTCTACGCAGACCGTCCAGACGGGAAGCCCTTGACCCTCATAGGAGCTCAGGGCCCAGACTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
3UTR GCA 90 bp TGGATCCATGGAGCTGAGGCACACATACGCAGCACATGTGCCGTGTaGTCCAAAGGCCAGCGGAACACCCACACTCCCTGGCCGGAAGCA +
Preference number: 1 (lower is better)
Translates to: WIHGAEAHIRSTCAV*SKGQRNTHTPWPEA
Trigger: TGCTTCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTGCTGCGTATGTGTGCCTCAGCTCCATGGATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 90 bp TTTAAAACCCAGGGTGCCGTTGCAGAGGCACCGCTAGGCTGGTGGTaGTGGGCTTGTACCACAAGGAGAGGCCTGCGGGGACAGTTGAAG +
Preference number: 1 (lower is better)
Translates to: FKTQGAVAEAPLGWW*WACTTRRGLRGQLK
Trigger: CTTCAACTGTCCCCGCAGGCCTCTCCTTGTGGTACAAGCCCATCACCACCAGCCTAGCGGTGCCTCTGCAACGGCACCCTGGGTTTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR CCA 90 bp CTCCAGGCTCCCATCCCTTGGCCTTGGCTGCACCGTGGCTCTCAGTaGGCTGGTCACAGCAGTCCTTGGTGTGAGATTCCAAAAAGAATG +
Preference number: 1 (lower is better)
Translates to: LQAPIPWPWLHRGSQ*AGHSSPWCEIPKRM
Trigger: CATTCTTTTTGGAATCTCACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCAAGGGATGGGAGCCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 90 bp AGTCAGTCACTAGCAGTCCTGTGCACTTCTGAGAGCACAGCTTGGTaGGAAGTCCTGGCCTTTGACCGCCTCGCTGAGGTTCTCCATTCC +
Preference number: 1 (lower is better)
Translates to: SQSLAVLCTSESTAW*EVLAFDRLAEVLHS
Trigger: GGAATGGAGAACCTCAGCGAGGCGGTCAAAGGCCAGGACTTCTCACCAAGCTGTGCTCTCAGAAGTGCACAGGACTGCTAGTGACTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR CCA 90 bp TGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTaGAGTCTGAAAAAGTACAACATTGGCAGGAAGGACCGTGACAGC +
Preference number: 1 (lower is better)
Translates to: WSDFRGGAPCLPREP*SLKKYNIGRKDRDS
Trigger: GCTGTCACGGTCCTTCCTGCCAATGTTGTACTTTTTCAGACTCCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 90 bp TCACAGCCCATATGCTCCCTACCTGGGCACTGGGACCAGCTGAGTTaGCTCATTCCAGATTCAAGTACAACTGTGCAAGCTTCCTTGGGC +
Preference number: 1 (lower is better)
Translates to: SQPICSLPGHWDQLS*LIPDSSTTVQASLG
Trigger: GCCCAAGGAAGCTTGCACAGTTGTACTTGAATCTGGAATGAGTCAACTCAGCTGGTCCCAGTGCCCAGGTAGGGAGCATATGGGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR CCA 90 bp TATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTaGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTATGAG +
Preference number: 1 (lower is better)
Translates to: YASLNEVHVSLWRHL*LWHFVRVWALSSYE
Trigger: CTCATAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
3UTR TCA 90 bp GCTGCACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTaGGATTCCAAAAAGAATGTGGTAACCATTGAAAACGGGCACTCT +
Preference number: 1 (lower is better)
Translates to: AAPWLSVGWSQQSLV*DSKKNVVTIENGHS
Trigger: AGAGTGCCCGTTTTCAATGGTTACCACATTCTTTTTGGAATCTCACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR CCA 90 bp AGCTGCAGAAGCTGTGTCAACTTCACAGCCCATATGCTCCCTACCTaGGCACTGGGACCAGCTGAGTTGACTCATTCCAGATTCAAGTAC +
Preference number: 1 (lower is better)
Translates to: SCRSCVNFTAHMLPT*ALGPAELTHSRFKY
Trigger: GTACTTGAATCTGGAATGAGTCAACTCAGCTGGTCCCAGTGCCCAGGTAGGGAGCATATGGGCTGTGAAGTTGACACAGCTTCTGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR CCA 90 bp GGGACAGTTGAAGGGCCCGGTACAATGATTCACCAAGTCCAGCTCTaGCTCAATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCA +
Preference number: 1 (lower is better)
Translates to: GTVEGPGTMIHQVQL*LNGLLYSMVWILSS
Trigger: TGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCATTGAGCCAGAGCTGGACTTGGTGAATCATTGTACCGGGCCCTTCAACTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR CCA 90 bp GCTTCCTTGGGCAATAGAGTGAGATGCCATTTCATGGCTCTCCAGTaGCTGCAGAGTCAAAGCAGTGTAAAGCATACACAGCTCCCATCT +
Preference number: 1 (lower is better)
Translates to: ASLGNRVRCHFMALQ*LQSQSSVKHTQLPS
Trigger: AGATGGGAGCTGTGTATGCTTTACACTGCTTTGACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCTCACTCTATTGCCCAAGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 90 bp TTCCAGATTCAAGTACAACTGTGCAAGCTTCCTTGGGCAATAGAGTaGGATGCCATTTCATGGCTCTCCAGTGGCTGCAGAGTCAAAGCA +
Preference number: 1 (lower is better)
Translates to: FQIQVQLCKLPWAIE*DAISWLSSGCRVKA
Trigger: TGCTTTGACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCTCACTCTATTGCCCAAGGAAGCTTGCACAGTTGTACTTGAATCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 90 bp GTTTGTTTTGCTAATAGTTGTGATCGAATCAAAAACTTCACCTTCTaGGGTGGCGTGGGTTGCGGAGTTGTCACGGTGCTGTACCTCCTG +
Preference number: 1 (lower is better)
Translates to: VCFANSCDRIKNFTF*GGVGCGVVTVLYLL
Trigger: CAGGAGGTACAGCACCGTGACAACTCCGCAACCCACGCCACCTCAGAAGGTGAAGTTTTTGATTCGATCACAACTATTAGCAAAACAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR CAA 90 bp CCAGGGTGCCGTTGCAGAGGCACCGCTAGGCTGGTGGTGATGGGCTaGTACCACAAGGAGAGGCCTGCGGGGACAGTTGAAGGGCCCGGT +
Preference number: 2 (lower is better)
Translates to: PGCRCRGTARLVVMG*YHKERPAGTVEGPG
Trigger: ACCGGGCCCTTCAACTGTCCCCGCAGGCCTCTCCTTGTGGTACAAGCCCATCACCACCAGCCTAGCGGTGCCTCTGCAACGGCACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CCA 90 bp CTCCAGGCTCCCATCCCTTGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTAGGACCGTGACAGCGTaGAAGACCTCTGGGCTCCCT +
Preference number: 2 (lower is better)
Translates to: LQAPIPWPWLHRGSQWAGRTVTA*KTSGLP
Trigger: AGGGAGCCCAGAGGTCTTCCACGCTGTCACGGTCCT...ACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCAAGGGATGGGAGCCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp CTCCAGGCTCCCATCCCTTGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCTGGATCCATGGAGCTaGGGCACACATACGCAGCAC +
Preference number: 2 (lower is better)
Translates to: LQAPIPWPWLHRGSQWAGLDPWS*GTHTQH
Trigger: GTGCTGCGTATGTGTGCCTCAGCTCCATGGATCCAG...ACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCAAGGGATGGGAGCCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp CTCCCAGTCACCTGTGAGGGGACGCCTGGGGCTCTAGGGACCCTGGGTGTGGAAGGCAGTCTGTGGGGTTaGCTGTGCCTCATGGTTTCC +
Preference number: 2 (lower is better)
Translates to: LPVTCEGTPGALGTLGVEGSLWG*LCLMVS
Trigger: GGAAACCATGAGGCACAGTCAACCCCACAGACTGCC...TTCCACACCCAGGGTCCCTAGAGCCCCAGGCGTCCCCTCACAGGTGACTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
3UTR-3UTR TCA 90 bp TGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCCGCTGCGCACTGGGCTaGCTGGGAAAGGCTCCAGAG +
Preference number: 2 (lower is better)
Translates to: CARSLCILAILGLPGPPVRCALG*LGKAPE
Trigger: CTCTGGAGCCTTTCCCAGTCAGCCCAGTGCGCAGCG...GACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp ATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTaGGGGCTTGACCGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: MAGTLTQGACLSHRQQSQAGFKV*GLDRQS
Trigger: AGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGC...CTGGGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
3UTR-3UTR TCA 90 bp TCACCTTCTGAGGTGGCGTGGGTTGCGGAGTTGTCACGGTGCTGTACCTCCTGGCCCACTCCTCACAGGTaGGCCCTGACCTGGATCCAT +
Preference number: 2 (lower is better)
Translates to: SPSEVAWVAELSRCCTSWPTPHR*ALTWIH
Trigger: ATGGATCCAGGTCAGGGCTCACCTGTGAGGAGTGGG...CCAGGAGGTACAGCACCGTGACAACTCCGCAACCCACGCCACCTCAGAAGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR GCA 90 bp TGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCTCCCTTGGCCTTGGCTaGACCGTGGCTCTCAGTGGG +
Preference number: 2 (lower is better)
Translates to: CARSLCILAILGLPGPPVSLGLG*TVALSG
Trigger: CCCACTGAGAGCCACGGTGCAGCCAAGGCCAAGGGA...GACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp TCCCCTGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCTCACAGGTGAGCCCTaGCCTGGATCCATGGAGCTG +
Preference number: 2 (lower is better)
Translates to: SPVLGHSVSLPSLGYLGLLTGEP*PGSMEL
Trigger: CAGCTCCATGGATCCAGGTCAGGGCTCACCTGTGAG...GAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp TTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTGACCAGTCCTGTGCACTTCTaGGAGCACAGCTTGGTGAGA +
Preference number: 2 (lower is better)
Translates to: LPSLGYLGLPSASWQCVTSPVHF*EHSLVR
Trigger: TCTCACCAAGCTGTGCTCTCAGAAGTGCACAGGACT...GGTCACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CCA 90 bp GTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGAAGGACCGTGACAGCGTaGAAGACCTCTGGGCTCCCT +
Preference number: 2 (lower is better)
Translates to: VIGQISGVEHPACLESPGRTVTA*KTSGLP
Trigger: AGGGAGCCCAGAGGTCTTCCACGCTGTCACGGTCCT...TCCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp TTTGTCAGAGTCTGGGCCCTGAGCTCCTATGAGGGTCAAGGGCTTCCCGTCTGGGGCAGTCTGTGGGGTTaGCTGTGCCTCATGGTTTCC +
Preference number: 2 (lower is better)
Translates to: FVRVWALSSYEGQGLPVWGSLWG*LCLMVS
Trigger: GGAAACCATGAGGCACAGTCAACCCCACAGACTGCC...CCAGACGGGAAGCCCTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000226840.2
ENSMUST00000239489.2
3UTR-3UTR GCA 90 bp GTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTAGCACATGTGCCGTGTaGTCCAAAGGCCAGCGGAAC +
Preference number: 2 (lower is better)
Translates to: VTLYPCHPWATWASRQPLSTCAV*SKGQRN
Trigger: GTTCCGCTGGCCTTTGGAGCACACGGCACATGTGCT...AAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CCA 90 bp TCACCTTCTGAGGTGGCGTGGGTTGCGGAGTTGTCACGGTGCTGTACCTCCTGGGTCCACGTCTCCCTCTaGAGACATCTGTGGCTTTGG +
Preference number: 2 (lower is better)
Translates to: SPSEVAWVAELSRCCTSWVHVSL*RHLWLW
Trigger: CCAAAGCCACAGATGTCTCCAGAGGGAGACGTGGAC...CCAGGAGGTACAGCACCGTGACAACTCCGCAACCCACGCCACCTCAGAAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp CGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTGGGCAGGCTTCAAGGTCTaGGGGCTTGACCGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: RSYASLNEVHVSLWRHLWAGFKV*GLDRQS
Trigger: AGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGC...CCACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
3UTR-3UTR TCA 90 bp TGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCGAGAGCACAGCTTGGTaGGAAGTCCTGGCCTTTGAC +
Preference number: 2 (lower is better)
Translates to: CARSLCILAILGLPGPPVESTAW*EVLAFD
Trigger: GTCAAAGGCCAGGACTTCTCACCAAGCTGTGCTCTC...GACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR GCA 90 bp GTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGACTGGCCGGAAGCAGCTaGAGAAGCTGTGTCAACTTC +
Preference number: 2 (lower is better)
Translates to: VIGQISGVEHPACLESPGLAGSS*RSCVNF
Trigger: GAAGTTGACACAGCTTCTGCAGCTGCTTCCGGCCAG...TCCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR GCA 90 bp GTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTCTGGCCGGAAGCAGCTaGAGAAGCTGTGTCAACTTC +
Preference number: 2 (lower is better)
Translates to: VTLYPCHPWATWASRQPLLAGSS*RSCVNF
Trigger: GAAGTTGACACAGCTTCTGCAGCTGCTTCCGGCCAG...AAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp TGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCGGCACTGGGACCAGCTaGGTTGACTCATTCCAGATT +
Preference number: 2 (lower is better)
Translates to: CARSLCILAILGLPGPPVGTGTS*VDSFQI
Trigger: AATCTGGAATGAGTCAACTCAGCTGGTCCCAGTGCC...GACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR GCA 90 bp TCACCTTCTGAGGTGGCGTGGGTTGCGGAGTTGTCACGGTGCTGTACCTCCTGGTCACTAGCAGTCCTGTaGACTTCTGAGAGCACAGCT +
Preference number: 2 (lower is better)
Translates to: SPSEVAWVAELSRCCTSWSLAVL*TSESTA
Trigger: AGCTGTGCTCTCAGAAGTGCACAGGACTGCTAGTGA...CCAGGAGGTACAGCACCGTGACAACTCCGCAACCCACGCCACCTCAGAAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR GCA 90 bp CTCCAGGCTCCCATCCCTTGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTATTCAAGTACAACTGTaGAAGCTTCCTTGGGCAATA +
Preference number: 2 (lower is better)
Translates to: LQAPIPWPWLHRGSQWAGIQVQL*KLPWAI
Trigger: TATTGCCCAAGGAAGCTTGCACAGTTGTACTTGAAT...ACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCAAGGGATGGGAGCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CCA 90 bp TCACCTTCTGAGGTGGCGTGGGTTGCGGAGTTGTCACGGTGCTGTACCTCCTGGCTCTGGAGACATCTGTaGCTTTGGCACTTTGTCAGA +
Preference number: 2 (lower is better)
Translates to: SPSEVAWVAELSRCCTSWLWRHL*LWHFVR
Trigger: TCTGACAAAGTGCCAAAGCCACAGATGTCTCCAGAG...CCAGGAGGTACAGCACCGTGACAACTCCGCAACCCACGCCACCTCAGAAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp TCCTTGGGCAATAGAGTGAGATGCCATTTCATGGCTCTCCAGTGGCTGCAGAGTTCAGAGTCTGGGCCCTaGGCTCCTATGAGGGTCAAG +
Preference number: 2 (lower is better)
Translates to: SLGNRVRCHFMALQWLQSSESGP*APMRVK
Trigger: CTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGA...ACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCTCACTCTATTGCCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp TCCCCTGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCGAGAGCCCTGGAGTCTaGAAAAGTACAACATTGGCA +
Preference number: 2 (lower is better)
Translates to: SPVLGHSVSLPSLGYLGLESPGV*KSTTLA
Trigger: TGCCAATGTTGTACTTTTTCAGACTCCAGGGCTCTC...GAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp TGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCGAGAGCCCTGGAGTCTaGAAAAGTACAACATTGGCA +
Preference number: 2 (lower is better)
Translates to: CARSLCILAILGLPGPPVESPGV*KSTTLA
Trigger: TGCCAATGTTGTACTTTTTCAGACTCCAGGGCTCTC...GACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR GCA 90 bp CTTGACCGGCAGTCTGTGGGGTTGACTGTGCCTCATGGTTTCCTGATGGTTCAAGTGTGTGGGAAGAATTaGCAGGCGTGTGGAAGGGTC +
Preference number: 2 (lower is better)
Translates to: LDRQSVGLTVPHGFLMVQVCGKN*QACGRV
Trigger: GACCCTTCCACACGCCTGGCAATTCTTCCCACACAC...TTGAACCATCAGGAAACCATGAGGCACAGTCAACCCCACAGACTGCCGGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
3UTR-3UTR CCA 90 bp GGCGTGGGGGTGGCAGGGTGGTCAGAGTTTCATATCATAGCTATGGCGCCCACTCTCTGGAGACATCTGTaGCTTTGGCACTTTGTCAGA +
Preference number: 2 (lower is better)
Translates to: GVGVAGWSEFHIIAMAPTLWRHL*LWHFVR
Trigger: TCTGACAAAGTGCCAAAGCCACAGATGTCTCCAGAG...AGTGGGCGCCATAGCTATGATATGAAACTCTGACCACCCTGCCACCCCCACGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CCA 90 bp AGGCACACATACGCAGCACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCGCCTCTTGTACAGCATaGTTTGGATTCTGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: RHTYAAHVPCAPKASGTPASCTA*FGFCLQ
Trigger: CTGAAGACAGAATCCAAACCATGCTGTACAAGAGGC...GGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTGCTGCGTATGTGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CCA 90 bp CACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTGAGATTCCAAAACACCAAGTCCAGCTCTaGCTCAATGGCCTCTTGTAC +
Preference number: 2 (lower is better)
Translates to: HRGSQWAGHSSPWCEIPKHQVQL*LNGLLY
Trigger: GTACAAGAGGCCATTGAGCCAGAGCTGGACTTGGTG...TTTTGGAATCTCACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp TTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTGACCTCATTTGAAGCAAAGTaGTGTCATTGGTCAGATTTC +
Preference number: 2 (lower is better)
Translates to: LPSLGYLGLPSASWQCVTSFEAK*CHWSDF
Trigger: GAAATCTGACCAATGACATCACTTTGCTTCAAATGA...GGTCACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp ATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTGCACAATTGGTCATTTaGAGCAAAGTGATGTCATTG +
Preference number: 2 (lower is better)
Translates to: ILAILGLPGPPVSLLAVRAQLVI*SKVMSL
Trigger: CAATGACATCACTTTGCTTCAAATGACCAATTGTGC...ACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CCA 90 bp ATTGAAGTTTCATTACTGCCTCTGTGTGTGGGAAGAATTGCCAGGCGTGTGGAAGGTGTGGAAAGCTGGTaGCTCCCTCCCTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: IEVSLLPLCVGRIARRVEGVESW*LPPSQS
Trigger: GCTCTGGGAGGGAGGGAGCCACCAGCTTTCCACACC...TTCCACACGCCTGGCAATTCTTCCCACACACAGAGGCAGTAATGAAACTTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
3UTR CAA 90 bp TTCACAGCCCATATGCTCCCTACCTGGGCACTGGGACCAGCTGAGTaGACTCATTCCAGATTCAAGTACAACTGTGCAAGCTTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: FTAHMLPTWALGPAE*THSRFKYNCASFLG
Trigger: CCCAAGGAAGCTTGCACAGTTGTACTTGAATCTGGAATGAGTCAACTCAGCTGGTCCCAGTGCCCAGGTAGGGAGCATATGGGCTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp CTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTATGCCAGTCAGAGTCTGGGCCCTaGGCTCCTATGAGGGTCAAG +
Preference number: 2 (lower is better)
Translates to: LVQHGLDSVFSLRTELCQSESGP*APMRVK
Trigger: CTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGA...CTGGCATAGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp TTCAAATTGAAGTTTCATTACTGCCTCTGTGTGTGGGAAGAATTGCCAGGCGTGGCAGGCTTCAAGGTCTaGGGGCTTGACCGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: FKLKFHYCLCVWEELPGVAGFKV*GLDRQS
Trigger: AGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGC...CACGCCTGGCAATTCTTCCCACACACAGAGGCAGTAATGAAACTTCAATTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
3UTR-3UTR CCA 90 bp TGGCTGCAGAGTCAAAGCAGTGTAAAGCATACACAGCTCCCATCTTCTCCCAAGCACTTTGTCAGAGTCTaGGCCCTGAGCTCCTATGAG +
Preference number: 2 (lower is better)
Translates to: WLQSQSSVKHTQLPSSPKHFVRV*ALSSYE
Trigger: CTCATAGGAGCTCAGGGCCCAGACTCTGACAAAGTG...CTTGGGAGAAGATGGGAGCTGTGTATGCTTTACACTGCTTTGACTCTGCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CCA 90 bp AAAAAGAATGTGGTAACCATTGAAAACGGGCACTCTGGCTTTGTTTCTTTGCACCCTCCCGCTGCGCACTaGGCTGACTGGGAAAGGCTC +
Preference number: 2 (lower is better)
Translates to: KKNVVTIENGHSGFVSLHPPAAH*ADWERL
Trigger: GAGCCTTTCCCAGTCAGCCCAGTGCGCAGCGGGAGG...GTGCAAAGAAACAAAGCCAGAGTGCCCGTTTTCAATGGTTACCACATTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR GCA 90 bp TGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCCTGGCTTTGTTTCTTTaGACAATTGGTCATTTGAAG +
Preference number: 2 (lower is better)
Translates to: CARSLCILAILGLPGPPVLALFL*TIGHLK
Trigger: CTTCAAATGACCAATTGTGCAAAGAAACAAAGCCAG...GACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CCA 90 bp GCTCTGGCTCAATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTACACTTTGTCAGAGTCTaGGCCCTGAGCTCCTATGAG +
Preference number: 2 (lower is better)
Translates to: ALAQWPLVQHGLDSVFSLHFVRV*ALSSYE
Trigger: CTCATAGGAGCTCAGGGCCCAGACTCTGACAAAGTG...TAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCATTGAGCCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp AAAAAGAATGTGGTAACCATTGAAAACGGGCACTCTGGCTTTGTTTCTTTGCACCTCACAGGTGAGCCCTaGCCTGGATCCATGGAGCTG +
Preference number: 2 (lower is better)
Translates to: KKNVVTIENGHSGFVSLHLTGEP*PGSMEL
Trigger: CAGCTCCATGGATCCAGGTCAGGGCTCACCTGTGAG...GTGCAAAGAAACAAAGCCAGAGTGCCCGTTTTCAATGGTTACCACATTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR GCA 90 bp ATAGATGCATCATCTCACCTGTGTTGCCATCCAGTGCTGAACAGTAATAAATACAGCACATGTGCCGTGTaGTCCAAAGGCCAGCGGAAC +
Preference number: 2 (lower is better)
Translates to: IDASSHLCCHPVLNSNKYSTCAV*SKGQRN
Trigger: GTTCCGCTGGCCTTTGGAGCACACGGCACATGTGCT...GTATTTATTACTGTTCAGCACTGGATGGCAACACAGGTGAGATGATGCATCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR GCA 90 bp CACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTGAGATTCCAAAACTGGCTTTGTTTCTTTaGACAATTGGTCATTTGAAG +
Preference number: 2 (lower is better)
Translates to: HRGSQWAGHSSPWCEIPKLALFL*TIGHLK
Trigger: CTTCAAATGACCAATTGTGCAAAGAAACAAAGCCAG...TTTTGGAATCTCACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR GCA 90 bp CCAAAAATCTTAATTTATTATAGATGCATCATCTCACCTGTGTTGCCATCCAGTTCAGCCTCTTGGCAGTaGGTGACCCCAGGCCATGTC +
Preference number: 2 (lower is better)
Translates to: PKILIYYRCIISPVLPSSSASWQ*VTPGHV
Trigger: GACATGGCCTGGGGTCACGCACTGCCAAGAGGCTGA...ACTGGATGGCAACACAGGTGAGATGATGCATCTATAATAAATTAAGATTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CCA 90 bp ATAGATGCATCATCTCACCTGTGTTGCCATCCAGTGCTGAACAGTAATAAATACCACTCTGAGAGCTTATaGGAGCAGGAGCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: IDASSHLCCHPVLNSNKYHSESL*EQEQKS
Trigger: GGACTTCTGCTCCTGCTCCCATAAGCTCTCAGAGTG...GTATTTATTACTGTTCAGCACTGGATGGCAACACAGGTGAGATGATGCATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp ATAGATGCATCATCTCACCTGTGTTGCCATCCAGTGCTGAACAGTAATAAATACCCTTGGGCAATAGAGTaGGATGCCATTTCATGGCTC +
Preference number: 2 (lower is better)
Translates to: IDASSHLCCHPVLNSNKYPWAIE*DAISWL
Trigger: GAGCCATGAAATGGCATCTCACTCTATTGCCCAAGG...GTATTTATTACTGTTCAGCACTGGATGGCAACACAGGTGAGATGATGCATCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR TCA 90 bp ATAGATGCATCATCTCACCTGTGTTGCCATCCAGTGCTGAACAGTAATAAATACCAGCAGTCCTTGGTGTaGGATTCCAAAAAGAATGTG +
Preference number: 2 (lower is better)
Translates to: IDASSHLCCHPVLNSNKYQQSLV*DSKKNV
Trigger: CACATTCTTTTTGGAATCTCACACCAAGGACTGCTG...GTATTTATTACTGTTCAGCACTGGATGGCAACACAGGTGAGATGATGCATCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CCA 90 bp CCAAAAATCTTAATTTATTATAGATGCATCATCTCACCTGTGTTGCCATCCAGTCTGCCTAGAGAGCCCTaGAGTCTGAAAAAGTACAAC +
Preference number: 2 (lower is better)
Translates to: PKILIYYRCIISPVLPSSLPREP*SLKKYN
Trigger: GTTGTACTTTTTCAGACTCCAGGGCTCTCTAGGCAG...ACTGGATGGCAACACAGGTGAGATGATGCATCTATAATAAATTAAGATTTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 72 bp CAGGGTGCCGTTGCAGAGGCACCGCTAGGCTGGTGGTaGTGGGCTTGTACCACAAGGAGAGGCCTGCGGGGA +
Preference number: 3 (lower is better)
Translates to: QGAVAEAPLGWW*WACTTRRGLRG
Trigger: TCCCCGCAGGCCTCTCCTTGTGGTACAAGCCCATCACCACCAGCCTAGCGGTGCCTCTGCAACGGCACCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CAA 90 bp TCACCTTCTGAGGTGGCGTGGGTTGCGGAGTTGTCACGGTGCTGTACCTCCTGGCCAGGCTCCCATCCCTaGGCCTTGGCTGCACCGTGG +
Preference number: 3 (lower is better)
Translates to: SPSEVAWVAELSRCCTSWPGSHP*ALAAPW
Trigger: CCACGGTGCAGCCAAGGCCAAGGGATGGGAGCCTGG...CCAGGAGGTACAGCACCGTGACAACTCCGCAACCCACGCCACCTCAGAAGGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR CCA 72 bp ACTCCAGGCTCCCATCCCTTGGCCTTGGCTGCACCGTaGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTG +
Preference number: 3 (lower is better)
Translates to: TPGSHPLALAAP*LSVGWSQQSLV
Trigger: CACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCAAGGGATGGGAGCCTGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 72 bp GCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTaGCCGGCAGTCTGTGGGGTTGACTGTGCCTCATGG +
Preference number: 3 (lower is better)
Translates to: AAVPGRLQGLRA*PAVCGVDCASW
Trigger: CCATGAGGCACAGTCAACCCCACAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
3UTR GCA 72 bp AGGGCTTCCCGTCTGGACGGTCTGCGTAGAGCCAGCTaGTATGGCAGGGACCCTCACACAAGGTGCCTGCTT +
Preference number: 3 (lower is better)
Translates to: RASRLDGLRRAS*YGRDPHTRCLL
Trigger: AAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGGCTCTACGCAGACCGTCCAGACGGGAAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
3UTR TCA 72 bp TCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTaGGGGCTTGACCGGCAGTCTGTGGGGTTGACTGTG +
Preference number: 3 (lower is better)
Translates to: SHRQQSQAGFKV*GLDRQSVGLTV
Trigger: CACAGTCAACCCCACAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
3UTR TCA 72 bp GCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTaGCCCCAGGCCATGTCTTGTAGGCTTTCATCTCAC +
Preference number: 3 (lower is better)
Translates to: ATWASRQPLGSA*PQAMSCRLSSH
Trigger: GTGAGATGAAAGCCTACAAGACATGGCCTGGGGTCACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 72 bp TCCTCACAGGTGAGCCCTGACCTGGATCCATGGAGCTaGGGCACACATACGCAGCACATGTGCCGTGTGCTC +
Preference number: 3 (lower is better)
Translates to: SSQVSPDLDPWS*GTHTQHMCRVL
Trigger: GAGCACACGGCACATGTGCTGCGTATGTGTGCCTCAGCTCCATGGATCCAGGTCAGGGCTCACCTGTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CAA 90 bp TTTGTCAGAGTCTGGGCCCTGAGCTCCTATGAGGGTCAAGGGCTTCCCGTCTGGACACAAGGTGCCTGCTaGTCCCATAGGCAGCAGTCC +
Preference number: 3 (lower is better)
Translates to: FVRVWALSSYEGQGLPVWTQGAC*SHRQQS
Trigger: GGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGT...CCAGACGGGAAGCCCTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
3UTR-3UTR CAA 90 bp TCCCCTGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCACACAAGGTGCCTGCTaGTCCCATAGGCAGCAGTCC +
Preference number: 3 (lower is better)
Translates to: SPVLGHSVSLPSLGYLGLTQGAC*SHRQQS
Trigger: GGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGT...GAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CAA 90 bp CAGCTTGGTGAGAAGTCCTGGCCTTTGACCGCCTCGCTGAGGTTCTCCATTCCGCTGGTGGTGATGGGCTaGTACCACAAGGAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: QLGEKSWPLTASLRFSIPLVVMG*YHKERP
Trigger: AGGCCTCTCCTTGTGGTACAAGCCCATCACCACCAG...CGGAATGGAGAACCTCAGCGAGGCGGTCAAAGGCCAGGACTTCTCACCAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CAA 90 bp GACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTTCAAGGTCTGAGGGCTaGACCGGCAGTCTGTGGGGT +
Preference number: 3 (lower is better)
Translates to: DGAMPALMKSTSPSGDICSRSEG*TGSLWG
Trigger: ACCCCACAGACTGCCGGTCAAGCCCTCAGACCTTGA...ACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
3UTR-3UTR CAA 90 bp TCACCTTCTGAGGTGGCGTGGGTTGCGGAGTTGTCACGGTGCTGTACCTCCTGGGAGACATCTGTGGCTTaGGCACTTTGTCAGAGTCTG +
Preference number: 3 (lower is better)
Translates to: SPSEVAWVAELSRCCTSWETSVA*ALCQSL
Trigger: CAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTC...CCAGGAGGTACAGCACCGTGACAACTCCGCAACCCACGCCACCTCAGAAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 72 bp CTAGCAGTCCTGTGCACTTCTGAGAGCACAGCTTGGTaGGAAGTCCTGGCCTTTGACCGCCTCGCTGAGGTT +
Preference number: 3 (lower is better)
Translates to: LAVLCTSESTAW*EVLAFDRLAEV
Trigger: AACCTCAGCGAGGCGGTCAAAGGCCAGGACTTCTCACCAAGCTGTGCTCTCAGAAGTGCACAGGACTGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 72 bp TTGCGGAGTTGTCACGGTGCTGTACCTCCTGGGGACTaGAGCTCCCCTGTGCTAGGTCACTCTGTATCCTTG +
Preference number: 3 (lower is better)
Translates to: LRSCHGAVPPGD*SSPVLGHSVSL
Trigger: CAAGGATACAGAGTGACCTAGCACAGGGGAGCTTCAGTCCCCAGGAGGTACAGCACCGTGACAACTCCGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR CCA 72 bp CCTCAGAATCAGGAACATGAGCACTCTGAGAGCTTATaGGAGCAGGAGCAGAAGTCCTCCCGCTGCGCACTG +
Preference number: 3 (lower is better)
Translates to: PQNQEHEHSESL*EQEQKSSRCAL
Trigger: CAGTGCGCAGCGGGAGGACTTCTGCTCCTGCTCCCATAAGCTCTCAGAGTGCTCATGTTCCTGATTCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CAA 90 bp TGTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGGAGACATCTGTGGCTTaGGCACTTTGTCAGAGTCTG +
Preference number: 3 (lower is better)
Translates to: CHWSDFRGGAPCLPREPWETSVA*ALCQSL
Trigger: CAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTC...CCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CAA 90 bp TCCCCTGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCACTGTGCAAGCTTCCTaGGGCAATAGAGTGAGATGC +
Preference number: 3 (lower is better)
Translates to: SPVLGHSVSLPSLGYLGLTVQAS*GNRVRC
Trigger: GCATCTCACTCTATTGCCCAAGGAAGCTTGCACAGT...GAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR CCA 72 bp TTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTaGAGTCTGAAAAAGTACAACATTGGCAGGAAGGAC +
Preference number: 3 (lower is better)
Translates to: FRGGAPCLPREP*SLKKYNIGRKD
Trigger: GTCCTTCCTGCCAATGTTGTACTTTTTCAGACTCCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CAA 90 bp TGGCTGCAGAGTCAAAGCAGTGTAAAGCATACACAGCTCCCATCTTCTCCCAAGTCAAGGTCTGAGGGCTaGACCGGCAGTCTGTGGGGT +
Preference number: 3 (lower is better)
Translates to: WLQSQSSVKHTQLPSSPKSRSEG*TGSLWG
Trigger: ACCCCACAGACTGCCGGTCAAGCCCTCAGACCTTGA...CTTGGGAGAAGATGGGAGCTGTGTATGCTTTACACTGCTTTGACTCTGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR CCA 72 bp AGCTGTGTCAACTTCACAGCCCATATGCTCCCTACCTaGGCACTGGGACCAGCTGAGTTGACTCATTCCAGA +
Preference number: 3 (lower is better)
Translates to: SCVNFTAHMLPT*ALGPAELTHSR
Trigger: TCTGGAATGAGTCAACTCAGCTGGTCCCAGTGCCCAGGTAGGGAGCATATGGGCTGTGAAGTTGACACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 72 bp GAGTCTGAAAAAGTACAACATTGGCAGGAAGGACCGTaGCAGCGTGGAAGACCTCTGGGCTCCCTCAGAATC +
Preference number: 3 (lower is better)
Translates to: ESEKVQHWQEGP*QRGRPLGSLRI
Trigger: GATTCTGAGGGAGCCCAGAGGTCTTCCACGCTGTCACGGTCCTTCCTGCCAATGTTGTACTTTTTCAGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR-3UTR CAA 90 bp TTCAAATTGAAGTTTCATTACTGCCTCTGTGTGTGGGAAGAATTGCCAGGCGTGTCAAGGTCTGAGGGCTaGACCGGCAGTCTGTGGGGT +
Preference number: 3 (lower is better)
Translates to: FKLKFHYCLCVWEELPGVSRSEG*TGSLWG
Trigger: ACCCCACAGACTGCCGGTCAAGCCCTCAGACCTTGA...CACGCCTGGCAATTCTTCCCACACACAGAGGCAGTAATGAAACTTCAATTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
3UTR TCA 72 bp GGGAAGAATTGCCAGGCGTGTGGAAGGGTCAGTCAGTaGTGGTGGCAACTGCATGAATCCAAAGTCATTCTC +
Preference number: 3 (lower is better)
Translates to: GKNCQACGRVSQ*WWQLHESKVIL
Trigger: GAGAATGACTTTGGATTCATGCAGTTGCCACCATCACTGACTGACCCTTCCACACGCCTGGCAATTCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
3UTR CCA 72 bp AGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTaGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTC +
Preference number: 3 (lower is better)
Translates to: SYASLNEVHVSL*RHLWLWHFVRV
Trigger: GACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
3UTR CCA 72 bp GAAGGGCCCGGTACAATGATTCACCAAGTCCAGCTCTaGCTCAATGGCCTCTTGTACAGCATGGTTTGGATT +
Preference number: 3 (lower is better)
Translates to: EGPGTMIHQVQL*LNGLLYSMVWI
Trigger: AATCCAAACCATGCTGTACAAGAGGCCATTGAGCCAGAGCTGGACTTGGTGAATCATTGTACCGGGCCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 72 bp CAAGTACAACTGTGCAAGCTTCCTTGGGCAATAGAGTaGGATGCCATTTCATGGCTCTCCAGTGGCTGCAGA +
Preference number: 3 (lower is better)
Translates to: QVQLCKLPWAIE*DAISWLSSGCR
Trigger: TCTGCAGCCACTGGAGAGCCATGAAATGGCATCTCACTCTATTGCCCAAGGAAGCTTGCACAGTTGTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 72 bp ATATGCTCCCTACCTGGGCACTGGGACCAGCTGAGTTaGCTCATTCCAGATTCAAGTACAACTGTGCAAGCT +
Preference number: 3 (lower is better)
Translates to: ICSLPGHWDQLS*LIPDSSTTVQA
Trigger: AGCTTGCACAGTTGTACTTGAATCTGGAATGAGTCAACTCAGCTGGTCCCAGTGCCCAGGTAGGGAGCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 72 bp GCTAATAGTTGTGATCGAATCAAAAACTTCACCTTCTaGGGTGGCGTGGGTTGCGGAGTTGTCACGGTGCTG +
Preference number: 3 (lower is better)
Translates to: ANSCDRIKNFTF*GGVGCGVVTVL
Trigger: CAGCACCGTGACAACTCCGCAACCCACGCCACCTCAGAAGGTGAAGTTTTTGATTCGATCACAACTATTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR GCA 72 bp ACAACTGTGCAAGCTTCCTTGGGCAATAGAGTGAGATaGCATTTCATGGCTCTCCAGTGGCTGCAGAGTCAA +
Preference number: 3 (lower is better)
Translates to: TTVQASLGNRVR*HFMALQWLQSQ
Trigger: TTGACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCTCACTCTATTGCCCAAGGAAGCTTGCACAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR CCA 72 bp AAGTCCAGCTCTGGCTCAATGGCCTCTTGTACAGCATaGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCT +
Preference number: 3 (lower is better)
Translates to: KSSSGSMASCTA*FGFCLQSKDGA
Trigger: AGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCATTGAGCCAGAGCTGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR CCA 72 bp GGCAATAGAGTGAGATGCCATTTCATGGCTCTCCAGTaGCTGCAGAGTCAAAGCAGTGTAAAGCATACACAG +
Preference number: 3 (lower is better)
Translates to: GNRVRCHFMALQ*LQSQSSVKHTQ
Trigger: CTGTGTATGCTTTACACTGCTTTGACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCTCACTCTATTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 72 bp TGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTaGGATTCCAAAAAGAATGTGGTAACCATTGAAAAC +
Preference number: 3 (lower is better)
Translates to: WLSVGWSQQSLV*DSKKNVVTIEN
Trigger: GTTTTCAATGGTTACCACATTCTTTTTGGAATCTCACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 72 bp GCACTCTGGCTTTGTTTCTTTGCACAATTGGTCATTTaGAGCAAAGTGATGTCATTGGTCAGATTTCAGGGG +
Preference number: 3 (lower is better)
Translates to: ALWLCFFAQLVI*SKVMSLVRFQG
Trigger: CCCCTGAAATCTGACCAATGACATCACTTTGCTTCAAATGACCAATTGTGCAAAGAAACAAAGCCAGAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR TCA 72 bp CTTGGTGTGAGATTCCAAAAAGAATGTGGTAACCATTaGAAACGGGCACTCTGGCTTTGTTTCTTTGCACAA +
Preference number: 3 (lower is better)
Translates to: LGVRFQKECGNH*KRALWLCFFAQ
Trigger: TTGTGCAAAGAAACAAAGCCAGAGTGCCCGTTTTCAATGGTTACCACATTCTTTTTGGAATCTCACACCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp CTCCAGGCTCCCATCCCTTGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCGCCGCTCTGGCTGCTaGGTGCGAAGCGGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: LQAPIPWPWLHRGSQWAGRRSGC*VRSGCG
Trigger: CCCGCAACCGCTTCGCACTCAGCAGCCAGAGCGGCG...ACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCAAGGGATGGGAGCCTGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp CACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCACACTCCCTGGCCGGACACGGTCTCGGGCCCTaGGGGTCAGCACGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HMCRVLQRPAEHPHSLAGHGLGP*GSARCS
Trigger: GGAGCAGCGTGCTGACCCTCAGGGCCCGAGACCGTG...TCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp GGCCAGCGGAACACCCACACTCCCTGGCCGGAAGCAGCTGCAGAAGCTGTGTCACTGGCCGCAGGCAAATaGGTCCGCGCCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GQRNTHTPWPEAAAEAVSLAAGK*VRACSR
Trigger: CCGGCTGCAGGCGCGGACCCATTTGCCTGCGGCCAG...TGACACAGCTTCTGCAGCTGCTTCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp CTCCAGGCTCCCATCCCTTGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCAGACGCAGCTCAGCTaGACCTCCTGGCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LQAPIPWPWLHRGSQWAGQTQLS*TSWPQA
Trigger: TGCCTGCGGCCAGGAGGTTCAGCTGAGCTGCGTCTG...ACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCAAGGGATGGGAGCCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp CACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCACACTCCCTGGCCGGAGGGAGGGCAGGGGCTTaGGGCACATGGGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: HMCRVLQRPAEHPHSLAGGRAGA*GTWVLH
Trigger: GTGGAGGACCCATGTGCCTCAAGCCCCTGCCCTCCC...TCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCTCTCCAGACGGCCCGTaGGGCAGGCCCAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: CPIGSSPRQASRSEGLTGSPDGP*GRPRWP
Trigger: TGGCCACCTGGGCCTGCCCCACGGGCCGTCTGGAGA...GCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp CTCCAGGCTCCCATCCCTTGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTTATGTGGACGGTGGCTaGGGCACTGAGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LQAPIPWPWLHRGSQWAGYVDGG*GTEWAW
Trigger: CCAGGCCCACTCAGTGCCTCAGCCACCGTCCACATA...ACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCAAGGGATGGGAGCCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR GCA 90 bp CTCCAGGCTCCCATCCCTTGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCTGCAGCTTCTTCCCTaGCAGCACCGCCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LQAPIPWPWLHRGSQWAGLQLLP*QHRPQV
Trigger: CACCTGAGGGCGGTGCTGGCAGGGAAGAAGCTGCAG...ACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCAAGGGATGGGAGCCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CTCCAGGCTCCCATCCCTTGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTTCACGGCAGTGGCTATaGGGAGGGCAGGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LQAPIPWPWLHRGSQWAGSRQWL*GGQGLE
Trigger: CTCAAGCCCCTGCCCTCCCCATAGCCACTGCCGTGA...ACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCAAGGGATGGGAGCCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTGTCGGGCCAGCCAGCTaGGACGTGGTTGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GPSHKVPACPIGSSPRQAVGPAS*DVVGQS
Trigger: GCTCTGGCCAACCACGTCCCAGCTGGCTGGCCCGAC...AGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
3UTR CAA 72 bp GCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTaGGCAGTGCGTGACCCCAGGCCATGTCTTGTAGGC +
Preference number: 4 (lower is better)
Translates to: AILGLPGPPVSL*AVRDPRPCLVG
Trigger: GCCTACAAGACATGGCCTGGGGTCACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp GGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCAGTCTGTGGACACAGACACCTCCATaGGCGCCTCCAGTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: GSSPRQASRSEGLTGSLWTQTPP*APPVAG
Trigger: ACCGGCCACTGGAGGCGCTCATGGAGGTGTCTGTGT...CCACAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp CACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCACACTCCCTGGCCGGATGCACTGACGGCCGATaGCACCAGGCTTGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: HMCRVLQRPAEHPHSLAGCTDGR*HQACRH
Trigger: GTGCCTGCAAGCCTGGTGTCATCGGCCGTCAGTGCA...TCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTGACCCTGCAGCTTCTTCCCTaGCAGCACCGCCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LPSLGYLGLPSASWQCVTLQLLP*QHRPQV
Trigger: CACCTGAGGGCGGTGCTGGCAGGGAAGAAGCTGCAG...GGTCACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CAGAGACTCCCAGTCACCTGTGAGGGGACGCCTGGGGCTCTAGGGACCCTGGGTCCTGGGCACTCCCTGTaGGTACATTCATGGCCACCC +
Preference number: 4 (lower is better)
Translates to: QRLPVTCEGTPGALGTLGPGHSL*VHSWPP
Trigger: GGGTGGCCATGAATGTACGCACAGGGAGTGCCCAGG...ACCCAGGGTCCCTAGAGCCCCAGGCGTCCCCTCACAGGTGACTGGGAGTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
CDS-3UTR CCA 90 bp TGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTATGAGGGTCAAGGGTCCCAACTCCAGGGCTaGCAGGGCGGCGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: WLWHFVRVWALSSYEGQGSQLQG*QGGGGQ
Trigger: CTGGCCGCCGCCGCCCTGCCAGCCCTGGAGTTGGGA...CCCTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp CTCCAGGCTCCCATCCCTTGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCTCATACTCGCCGGGTaGGCACACACAGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LQAPIPWPWLHRGSQWAGLILAG*AHTVEA
Trigger: GGCTTCCACTGTGTGTGCCCACCCGGCGAGTATGAG...ACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCAAGGGATGGGAGCCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTGACCCGGCTGTGGGAGCCGTaGGGGAAACAGTCACAGGGA +
Preference number: 4 (lower is better)
Translates to: LPSLGYLGLPSASWQCVTRLWEP*GKQSQG
Trigger: TCCCTGTGACTGTTTCCCCCACGGCTCCCACAGCCG...GGTCACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTTCGCAGGCACGGCTGTaGGAGCCGTGGGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: WPWLHRGSQWAGHSSPWCSQARL*EPWGKQ
Trigger: CTGTTTCCCCCACGGCTCCCACAGCCGTGCCTGCGA...ACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CTCCAGGCTCCCATCCCTTGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTTACCCACGGATCCTTTaGGGCATGGCACCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LQAPIPWPWLHRGSQWAGYPRIL*GMAPLL
Trigger: CAGCAGCGGTGCCATGCCCCAAAGGATCCGTGGGTA...ACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCAAGGGATGGGAGCCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTGACCCTCAGCCCTGGGCTCTaGTTGTGCCGTGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LPSLGYLGLPSASWQCVTLSPGL*LCREWG
Trigger: ACCCCACTCACGGCACAACCAGAGCCCAGGGCTGAG...GGTCACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GGCCAGCGGAACACCCACACTCCCTGGCCGGAAGCAGCTGCAGAAGCTGTGTCACCTTTCCGCTGCTCCTaGGGCTGGCTGCTAAGCACG +
Preference number: 4 (lower is better)
Translates to: GQRNTHTPWPEAAAEAVSPFRCS*GWLLST
Trigger: CGTGCTTAGCAGCCAGCCCCAGGAGCAGCGGAAAGG...TGACACAGCTTCTGCAGCTGCTTCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CAGAGACTCCCAGTCACCTGTGAGGGGACGCCTGGGGCTCTAGGGACCCTGGGTGAGATGCTCACGGCCTaGCTCCCTCCTCGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: QRLPVTCEGTPGALGTLGEMLTA*LPPRSL
Trigger: AAGACTCCGAGGAGGGAGCCAGGCCGTGAGCATCTC...ACCCAGGGTCCCTAGAGCCCCAGGCGTCCCCTCACAGGTGACTGGGAGTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
CDS-3UTR TCA 90 bp TCACCTTCTGAGGTGGCGTGGGTTGCGGAGTTGTCACGGTGCTGTACCTCCTGGCTCCTGCAGGTCCTCTaGCGGGAAGAACCGGCCACG +
Preference number: 4 (lower is better)
Translates to: SPSEVAWVAELSRCCTSWLLQVL*REEPAT
Trigger: CGTGGCCGGTTCTTCCCGTCAGAGGACCTGCAGGAG...CCAGGAGGTACAGCACCGTGACAACTCCGCAACCCACGCCACCTCAGAAGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp GCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCTGGCTGACAGCACAGTaGCAGGGGCCACACACCGGG +
Preference number: 4 (lower is better)
Translates to: ACPIGSSPRQASRSEGLTWLTAQ*QGPHTG
Trigger: CCCGGTGTGTGGCCCCTGTCACTGTGCTGTCAGCCA...GGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTAGCCCTTCTCCCCGCTaGAGTGCCGGACTGCGTTAC +
Preference number: 4 (lower is better)
Translates to: WPWLHRGSQWAGHSSPWCSPSPR*SAGLRY
Trigger: GTAACGCAGTCCGGCACTGCAGCGGGGAGAAGGGCT...ACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCACACTCCCTGGCCGGAGCCGAGTCATCCAGCTaGAGCTTCTTCCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: HMCRVLQRPAEHPHSLAGAESSS*SFFPAS
Trigger: GCTGGCAGGGAAGAAGCTGCAGCTGGATGACTCGGC...TCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CGTAGAGCCAGCTGCTATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCAACTCGCCCAGGGCGGTaGGGAGCATGTCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: RRASCYGRDPHTRCLLVPTRPGR*GACLAL
Trigger: AAGGGCCAGACATGCTCCGCACCGCCCTGGGCGAGT...TGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGGCTCTACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp GGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCAGTCTGTGGCCTGGGCACTCCCTGTaGGTACATTCATGGCCACCC +
Preference number: 4 (lower is better)
Translates to: GSSPRQASRSEGLTGSLWPGHSL*VHSWPP
Trigger: GGGTGGCCATGAATGTACGCACAGGGAGTGCCCAGG...CCACAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS-3UTR CCA 90 bp CCAGCTGCTATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGCTGACACCTGGTAGCTaGGCAGCGGGAACTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PAAMAGTLTQGACLSHRQLTPGS*AAGTAG
Trigger: GCCCGCAGTTCCCGCTGCCCAGCTACCAGGTGTCAG...CTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp TTTGTCAGAGTCTGGGCCCTGAGCTCCTATGAGGGTCAAGGGCTTCCCGTCTGGGGCCGGCCCCCATCCTaGGCTTTGATGCGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: FVRVWALSSYEGQGLPVWGRPPS*ALMRRV
Trigger: CACCCTGCGCATCAAAGCCCAGGATGGGGGCCGGCC...CCAGACGGGAAGCCCTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGACAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp TGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTCGGCTGTGGGAGCCGTaGGGGAAACAGTCACAGGGA +
Preference number: 4 (lower is better)
Translates to: WPWLHRGSQWAGHSSPWCRLWEP*GKQSQG
Trigger: TCCCTGTGACTGTTTCCCCCACGGCTCCCACAGCCG...ACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CGTAGAGCCAGCTGCTATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCATCGCAGGCACGGCTGTaGGAGCCGTGGGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: RRASCYGRDPHTRCLLVPSQARL*EPWGKQ
Trigger: CTGTTTCCCCCACGGCTCCCACAGCCGTGCCTGCGA...TGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGGCTCTACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCGCCTCTGCAGAGAGCTaGGGAGTGGGGTTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: CPIGSSPRQASRSEGLTGASAES*GVGFPH
Trigger: GTGAGGGAACCCCACTCCCCAGCTCTCTGCAGAGGC...GCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp GTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTCGGTGGCTGAGGCACTaGGTGGGCCTGGATTGCGAC +
Preference number: 4 (lower is better)
Translates to: VTLYPCHPWATWASRQPLRWLRH*VGLDCD
Trigger: GTCGCAATCCAGGCCCACTCAGTGCCTCAGCCACCG...AAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp GCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCTCCGGGTCCGGAACATaGGCCCCAGGTACCAAGGCA +
Preference number: 4 (lower is better)
Translates to: ACPIGSSPRQASRSEGLTSGSGT*APGTKA
Trigger: TGCCTTGGTACCTGGGGCTCATGTTCCGGACCCGGA...GGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp GCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCTGCACTGACGGCCGATaGCACCAGGCTTGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: ACPIGSSPRQASRSEGLTCTDGR*HQACRH
Trigger: GTGCCTGCAAGCCTGGTGTCATCGGCCGTCAGTGCA...GGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp GCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCTTCACAGCCCTTGGCTaGCCACCCTCCAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: ACPIGSSPRQASRSEGLTFTALG*PPSSPT
Trigger: GGTGGGACTGGAGGGTGGTCAGCCAAGGGCTGTGAA...GGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp TCACCTTCTGAGGTGGCGTGGGTTGCGGAGTTGTCACGGTGCTGTACCTCCTGGTTCACAGCCCTTGGCTaGCCACCCTCCAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: SPSEVAWVAELSRCCTSWFTALG*PPSSPT
Trigger: GGTGGGACTGGAGGGTGGTCAGCCAAGGGCTGTGAA...CCAGGAGGTACAGCACCGTGACAACTCCGCAACCCACGCCACCTCAGAAGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCACACTCCCTGGCCGGAGGAGCCTGGAAGACGTaGCAGCTGTGGCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: HMCRVLQRPAEHPHSLAGGAWKT*QLWLPS
Trigger: TGATGGAAGCCACAGCTGGCACGTCTTCCAGGCTCC...TCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp ATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTGTTCCTCAGAGCCTTTaGCAGCCGCAGGGACCGGTT +
Preference number: 4 (lower is better)
Translates to: ILAILGLPGPPVSLLAVRVPQSL*QPQGPV
Trigger: AACCGGTCCCTGCGGCTGGCAAAGGCTCTGAGGAAC...ACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTGACCGATCTGTTCCCACGATaGCTCTGTAGCTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LPSLGYLGLPSASWQCVTDLFPR*LCSWGQ
Trigger: CTGGCCCCAGCTACAGAGGCATCGTGGGAACAGATC...GGTCACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CAGAGACTCCCAGTCACCTGTGAGGGGACGCCTGGGGCTCTAGGGACCCTGGGTGAGGATGTGGGGCTCTaGTCACAATCAGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QRLPVTCEGTPGALGTLGEDVGL*SQSASF
Trigger: GAAGCTGGCTGATTGTGAGCAGAGCCCCACATCCTC...ACCCAGGGTCCCTAGAGCCCCAGGCGTCCCCTCACAGGTGACTGGGAGTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
CDS-3UTR CCA 90 bp GCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCAAGGGCAGCACTCGCTaGGCGGAGATGGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: ACPIGSSPRQASRSEGLTKGSTR*AEMVVS
Trigger: GCTCACCACCATCTCCGCCCAGCGAGTGCTGCCCTT...GGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp GGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTGGGGCAGGCCCAGGTaGCCAATGTTGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GPSHKVPACPIGSSPRQAWGRPR*PMLGLL
Trigger: CAACAAGCCCAACATTGGCCACCTGGGCCTGCCCCA...AGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CAGCTTGGTGAGAAGTCCTGGCCTTTGACCGCCTCGCTGAGGTTCTCCATTCCGGGATCCTTTGGGGCATaGCACCGCTGCTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QLGEKSWPLTASLRFSIPGSFGA*HRCWLP
Trigger: GGGCAGCCAGCAGCGGTGCCATGCCCCAAAGGATCC...CGGAATGGAGAACCTCAGCGAGGCGGTCAAAGGCCAGGACTTCTCACCAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GGCCAGCGGAACACCCACACTCCCTGGCCGGAAGCAGCTGCAGAAGCTGTGTCACACTGGCAAGTGACGTaGGTCCGGTTCCTCGACAGA +
Preference number: 4 (lower is better)
Translates to: GQRNTHTPWPEAAAEAVSHWQVT*VRFLDR
Trigger: TCTGTCGAGGAACCGGACCCACGTCACTTGCCAGTG...TGACACAGCTTCTGCAGCTGCTTCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCAGTCTGTGGCGTGGTAGAACCGCATaGGCCCAGTGTCGATGTTGC +
Preference number: 4 (lower is better)
Translates to: GSSPRQASRSEGLTGSLWRGRTA*AQCRCC
Trigger: GCAACATCGACACTGGGCCCATGCGGTTCTACCACG...CCACAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CTCCAGGCTCCCATCCCTTGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCTGTGGGCCACGCAGTaGAACAGGAGGACAAAGATG +
Preference number: 4 (lower is better)
Translates to: LQAPIPWPWLHRGSQWAGLWATQ*NRRTKM
Trigger: CATCTTTGTCCTCCTGTTCCACTGCGTGGCCCACAG...ACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCAAGGGATGGGAGCCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCCAGAGCATCTGCTTTTaGGGTGCTATGGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: CPIGSSPRQASRSEGLTGQSICF*GAMGGA
Trigger: GGCCCCGCCCATAGCACCCCAAAAGCAGATGCTCTG...GCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000239489.2
CDS-3UTR CCA 90 bp GCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGCTAAGCACGGCCACTaGCTTGGCCAGGACCCCACT +
Preference number: 4 (lower is better)
Translates to: ACPIGSSPRQASRSEGLTAKHGH*LGQDPT
Trigger: AGTGGGGTCCTGGCCAAGCCAGTGGCCGTGCTTAGC...GGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR TCA 90 bp TGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTTCTAGCACGGCAGCCTaGAAGGGGCTGCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: WPWLHRGSQWAGHSSPWCSSTAA*KGLLTK
Trigger: CTTTGTGAGCAGCCCCTTTCAGGCTGCCGTGCTAGA...ACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp TGTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGTCCGGGTCCGGAACATaGGCCCCAGGTACCAAGGCA +
Preference number: 4 (lower is better)
Translates to: CHWSDFRGGAPCLPREPWSGSGT*APGTKA
Trigger: TGCCTTGGTACCTGGGGCTCATGTTCCGGACCCGGA...CCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp TTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTGACCAGGTGTTGTTGCAGTTaGGGGAGCGCGTTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LPSLGYLGLPSASWQCVTRCCCS*GSALAE
Trigger: CTCTGCTAACGCGCTCCCTCAACTGCAACAACACCT...GGTCACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCTGTATGGCTGCATTCTaGCCCTGGTCCCGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: CPIGSSPRQASRSEGLTGCMAAF*PWSRSV
Trigger: CACTGACCGGGACCAGGGGCAGAATGCAGCCATACA...GCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR GCA 90 bp ATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTACCTGTTCACACAGGTaGCCCCGTTCTGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: ILAILGLPGPPVSLLAVRTCSHR*PRSGMR
Trigger: CCTCATGCCAGAACGGGGGCACCTGTGTGAACAGGT...ACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTGATCTGTTCCCACGATaGCTCTGTAGCTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WPWLHRGSQWAGHSSPWCDLFPR*LCSWGQ
Trigger: CTGGCCCCAGCTACAGAGGCATCGTGGGAACAGATC...ACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp GGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCAGTCTGTGGAAATGCCTCAGTAGCTaGGCTGCACCAGCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: GSSPRQASRSEGLTGSLWKCLSS*AAPASL
Trigger: AAGCGAGGCTGGTGCAGCGCAGCTACTGAGGCATTT...CCACAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCACACTCCCTGGCCGGAGCCCAGTGTCGATGTTaGGCACTTCTGTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: HMCRVLQRPAEHPHSLAGAQCRC*ALLSAC
Trigger: GCATGCTGACAGAAGTGCGCAACATCGACACTGGGC...TCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CGTAGAGCCAGCTGCTATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCAGCCGAGTCATCCAGCTaGAGCTTCTTCCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RRASCYGRDPHTRCLLVPAESSS*SFFPAS
Trigger: GCTGGCAGGGAAGAAGCTGCAGCTGGATGACTCGGC...TGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGGCTCTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CCAGCTGCTATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGCCTGGGCACTCCCTGTaGGTACATTCATGGCCACCC +
Preference number: 4 (lower is better)
Translates to: PAAMAGTLTQGACLSHRQPGHSL*VHSWPP
Trigger: GGGTGGCCATGAATGTACGCACAGGGAGTGCCCAGG...CTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR CCA 90 bp TGTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGGCCTCCACCAGCAGCTaGTACTCAGCCGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: CHWSDFRGGAPCLPREPWASTSS*YSAASS
Trigger: TGAGGAGGCGGCTGAGTACCAGCTGCTGGTGGAGGC...CCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp TCACCTTCTGAGGTGGCGTGGGTTGCGGAGTTGTCACGGTGCTGTACCTCCTGGCCTGGATTGCGACCCTaGTCATTGGCCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SPSEVAWVAELSRCCTSWPGLRP*SLASTS
Trigger: GCTGGTGGAGGCCAATGACCAGGGTCGCAATCCAGG...CCAGGAGGTACAGCACCGTGACAACTCCGCAACCCACGCCACCTCAGAAGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp TGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTGGGGTGGGAAGCTCCTaGTGCTCACTTCACAGTAGG +
Preference number: 4 (lower is better)
Translates to: WPWLHRGSQWAGHSSPWCGVGSS*CSLHSR
Trigger: CCTACTGTGAAGTGAGCACCAGGAGCTTCCCACCCC...ACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TGTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGCGTTCCTGTCCTGGGTaGCAAACGCCAGGGAGACGG +
Preference number: 4 (lower is better)
Translates to: CHWSDFRGGAPCLPREPWRSCPG*QTPGRR
Trigger: CCGTCTCCCTGGCGTTTGCCACCCAGGACAGGAACG...CCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GGCCAGCGGAACACCCACACTCCCTGGCCGGAAGCAGCTGCAGAAGCTGTGTCATCAGGGTGGCAATGTTaGTGGACGTCTCTCCCATCC +
Preference number: 4 (lower is better)
Translates to: GQRNTHTPWPEAAAEAVSSGWQC*WTSLPS
Trigger: GGATGGGAGAGACGTCCACCAACATTGCCACCCTGA...TGACACAGCTTCTGCAGCTGCTTCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTGCATGGCACCGCTGCTaGCTGCCCAAATTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: GPSHKVPACPIGSSPRQAAWHRC*LPKFRL
Trigger: CAGACGAAATTTGGGCAGCCAGCAGCGGTGCCATGC...AGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCACACTCCCTGGCCGGAAGGTCAAAGCCCTGCTaGCGGCTCTCATGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: HMCRVLQRPAEHPHSLAGRSKPC*RLSCCK
Trigger: CTTACAGCATGAGAGCCGCCAGCAGGGCTTTGACCT...TCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CAGCTTGGTGAGAAGTCCTGGCCTTTGACCGCCTCGCTGAGGTTCTCCATTCCGGCCTCTGCAGAGAGCTaGGGAGTGGGGTTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: QLGEKSWPLTASLRFSIPASAES*GVGFPH
Trigger: GTGAGGGAACCCCACTCCCCAGCTCTCTGCAGAGGC...CGGAATGGAGAACCTCAGCGAGGCGGTCAAAGGCCAGGACTTCTCACCAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCCACTGGCAAGTGACGTaGGTCCGGTTCCTCGACAGA +
Preference number: 4 (lower is better)
Translates to: VPACPIGSSPRQASRSEGHWQVT*VRFLDR
Trigger: TCTGTCGAGGAACCGGACCCACGTCACTTGCCAGTG...GCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp ATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTGGATGCTGTGCAGGTTaGAGCGCAGTGTCCGAACGA +
Preference number: 4 (lower is better)
Translates to: ILAILGLPGPPVSLLAVRGCCAG*SAVSER
Trigger: TCGTTCGGACACTGCGCTCCAACCTGCACAGCATCC...ACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GGACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGGTCGGGCCAGCCAGCTaGGACGTGGTTGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GRSYASLNEVHVSLWRHLVGPAS*DVVGQS
Trigger: GCTCTGGCCAACCACGTCCCAGCTGGCTGGCCCGAC...CAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR CCA 90 bp TGTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGGCTAAGCACGGCCACTaGCTTGGCCAGGACCCCACT +
Preference number: 4 (lower is better)
Translates to: CHWSDFRGGAPCLPREPWAKHGH*LGQDPT
Trigger: AGTGGGGTCCTGGCCAAGCCAGTGGCCGTGCTTAGC...CCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CGTAGAGCCAGCTGCTATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCAGAGATGCTCACGGCCTaGCTCCCTCCTCGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: RRASCYGRDPHTRCLLVPEMLTA*LPPRSL
Trigger: AAGACTCCGAGGAGGGAGCCAGGCCGTGAGCATCTC...TGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGGCTCTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
3UTR CAA 72 bp CGTTGCAGAGGCACCGCTAGGCTGGTGGTGATGGGCTaGTACCACAAGGAGAGGCCTGCGGGGACAGTTGAA +
Preference number: 4 (lower is better)
Translates to: RCRGTARLVVMG*YHKERPAGTVE
Trigger: TTCAACTGTCCCCGCAGGCCTCTCCTTGTGGTACAAGCCCATCACCACCAGCCTAGCGGTGCCTCTGCAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR CAA 72 bp TCCCCTGTGCTAGGTCACTCTGTATCCTTGCCATCCTaGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SPVLGHSVSLPS*GYLGLPSASWQ
Trigger: CTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp TTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTGACCCACCGAGACCAGTCCTaGGGAATTAATGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LPSLGYLGLPSASWQCVTHRDQS*GINERR
Trigger: CCTCCTCTCATTAATTCCTCAGGACTGGTCTCGGTG...GGTCACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp GGCGTGGGGGTGGCAGGGTGGTCAGAGTTTCATATCATAGCTATGGCGCCCACTCATTGTCCTGAGCCGTaGTGGCCAGCGTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: GVGVAGWSEFHIIAMAPTHCPEP*WPACRQ
Trigger: CTGCCTACACGCTGGCCATCACGGCTCAGGACAATG...AGTGGGCGCCATAGCTATGATATGAAACTCTGACCACCCTGCCACCCCCACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp TGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTATGAGGGTCAAGGGGGGCGGAGATGGTGGTaGGCAGTGTCCGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: WLWHFVRVWALSSYEGQGGRRWW*AVSGSG
Trigger: ACCTGAACCGGACACTGCTCACCACCATCTCCGCCC...CCCTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp GTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCCAGTGTCCGAACGAGTaGGAGAAGGACAAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VPACPIGSSPRQASRSEGQCPNE*EKDKGH
Trigger: GTGGCCTTTGTCCTTCTCTCACTCGTTCGGACACTG...GCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp ATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTAGGTGTTGTTGCAGTTaGGGGAGCGCGTTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: ILAILGLPGPPVSLLAVRRCCCS*GSALAE
Trigger: CTCTGCTAACGCGCTCCCTCAACTGCAACAACACCT...ACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CAGCTTGGTGAGAAGTCCTGGCCTTTGACCGCCTCGCTGAGGTTCTCCATTCCGGCTCTGGCTGCTGAGTaGGAAGCGGTTGCGGGTGTT +
Preference number: 4 (lower is better)
Translates to: QLGEKSWPLTASLRFSIPALAAE*EAVAGV
Trigger: AACACCCGCAACCGCTTCGCACTCAGCAGCCAGAGC...CGGAATGGAGAACCTCAGCGAGGCGGTCAAAGGCCAGGACTTCTCACCAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR GCA 90 bp CGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTGGTGGAGCCGCTCTGAGTaGCCTGGGCAGCGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RSYASLNEVHVSLWRHLWWSRSE*PGQRSC
Trigger: ACAGCTGCGCTGCCCAGGGCACTCAGAGCGGCTCCA...CCACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp GGACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTGGAGCCGCTCTGAGTaGCCTGGGCAGCGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GRSYASLNEVHVSLWRHLWSRSE*PGQRSC
Trigger: ACAGCTGCGCTGCCCAGGGCACTCAGAGCGGCTCCA...CAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp GGGCGTGGGGGTGGCAGGGTGGTCAGAGTTTCATATCATAGCTATGGCGCCCACGGAGCCTGGAAGACGTaGCAGCTGTGGCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: GRGGGRVVRVSYHSYGAHGAWKT*QLWLPS
Trigger: TGATGGAAGCCACAGCTGGCACGTCTTCCAGGCTCC...GTGGGCGCCATAGCTATGATATGAAACTCTGACCACCCTGCCACCCCCACGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TCCCTCTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCAGCCCTTCTCCCCGCTaGAGTGCCGGACTGCGTTAC +
Preference number: 4 (lower is better)
Translates to: SLWRHLWLWHFVRVWALSSPSPR*SAGLRY
Trigger: GTAACGCAGTCCGGCACTGCAGCGGGGAGAAGGGCT...GCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTCCGTGCGCACATCATTaGCAAAGAGGGTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: WPWLHRGSQWAGHSSPWCPCAHH*QRGCCS
Trigger: GGAACAGCACCCTCTTTGGCAATGATGTGCGCACGG...ACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp GTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCCCGTGCGCACATCATTaGCAAAGAGGGTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VPACPIGSSPRQASRSEGPCAHH*QRGCCS
Trigger: GGAACAGCACCCTCTTTGGCAATGATGTGCGCACGG...GCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCACACTCCCTGGCCGGAGAAGCTGGTAGGCCGTaGGCACATCATTGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: HMCRVLQRPAEHPHSLAGEAGRP*AHHCQR
Trigger: TCTTTGGCAATGATGTGCGCACGGCCTACCAGCTTC...TCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTGACCTCTCATGCTGTAAGATaGGGGCCAGAAGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LPSLGYLGLPSASWQCVTSHAVR*GPEAGR
Trigger: CCTACCAGCTTCTGGCCCGCATCTTACAGCATGAGA...GGTCACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CAGAGACTCCCAGTCACCTGTGAGGGGACGCCTGGGGCTCTAGGGACCCTGGGTCTTTGTTTTTCAGGATaGCTTTCCGCTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QRLPVTCEGTPGALGTLGLCFSG*LSAAPG
Trigger: CCCAGGAGCAGCGGAAAGGCATCCTGAAAAACAAAG...ACCCAGGGTCCCTAGAGCCCCAGGCGTCCCCTCACAGGTGACTGGGAGTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
CDS-3UTR CCA 90 bp CACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCACACTCCCTGGCCGGACGATGCTGTAGTGTATaGCTGCATTCTGCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: HMCRVLQRPAEHPHSLAGRCCSV*LHSAPG
Trigger: ACCAGGGGCAGAATGCAGCCATACACTACAGCATCG...TCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp TGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCGAGCGAACGTTCACCTaGCAATGCTCCCCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: CPIGSSPRQASRSEGLTGERTFT*QCSPVK
Trigger: CTTCACTGGGGAGCATTGCCAGGTGAACGTTCGCTC...GCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp ATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCAGTCTGGGTGGGCACACACAGTaGAAGCCTCCAATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: IGSSPRQASRSEGLTGSLGGHTQ*KPPMSR
Trigger: CCTGCTCATTGGAGGCTTCCACTGTGTGTGCCCACC...CAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CAGCTTGGTGAGAAGTCCTGGCCTTTGACCGCCTCGCTGAGGTTCTCCATTCCGCTCATACTCGCCGGGTaGGCACACACAGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: QLGEKSWPLTASLRFSIPLILAG*AHTVEA
Trigger: GGCTTCCACTGTGTGTGCCCACCCGGCGAGTATGAG...CGGAATGGAGAACCTCAGCGAGGCGGTCAAAGGCCAGGACTTCTCACCAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TCACCTTCTGAGGTGGCGTGGGTTGCGGAGTTGTCACGGTGCTGTACCTCCTGGAACGAAGGACTGGGGTaGGAAGCTCCTGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: SPSEVAWVAELSRCCTSWNEGLG*EAPGAH
Trigger: GTGAGCACCAGGAGCTTCCCACCCCAGTCCTTCGTT...CCAGGAGGTACAGCACCGTGACAACTCCGCAACCCACGCCACCTCAGAAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TGTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGAGGGAGACGGTGAAGTaGAAGCGTTGCCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: CHWSDFRGGAPCLPREPWRETVK*KRCRRP
Trigger: AGGCCTGCGGCAACGCTTCCACTTCACCGTCTCCCT...CCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGATGGGGCAGGCCCAGGTaGCCAATGTTGGGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: VIGQISGVEHPACLESPGWGRPR*PMLGLL
Trigger: CAACAAGCCCAACATTGGCCACCTGGGCCTGCCCCA...TCCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp ATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTAGTCTTCTGGCAGGTTaGGGACACCACCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: ILAILGLPGPPVSLLAVRSLLAG*GHHPEA
Trigger: TGCTTCTGGGTGGTGTCCCCAACCTGCCAGAAGACT...ACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp AACATTGGCAGGAAGGACCGTGACAGCGTGGAAGACCTCTGGGCTCCCTCAGAATCACGGCAGTGGCTATaGGGAGGGCAGGGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: NIGRKDRDSVEDLWAPSESRQWL*GGQGLE
Trigger: CTCAAGCCCCTGCCCTCCCCATAGCCACTGCCGTGA...TTCTGAGGGAGCCCAGAGGTCTTCCACGCTGTCACGGTCCTTCCTGCCAATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCTCCCCCACCAGCCTTTaGGGCACGGAAGGTCGACTT +
Preference number: 4 (lower is better)
Translates to: CARSLCILAILGLPGPPVSPTSL*GTEGRL
Trigger: AAGTCGACCTTCCGTGCCCCAAAGGCTGGTGGGGGA...GACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTGAGATTCCAAAAGGATCCTTTGGGGCATaGCACCGCTGCTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HRGSQWAGHSSPWCEIPKGSFGA*HRCWLP
Trigger: GGGCAGCCAGCAGCGGTGCCATGCCCCAAAGGATCC...TTTTGGAATCTCACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCAGGTCAAAGCCCTGCTaGCGGCTCTCATGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: VPACPIGSSPRQASRSEGRSKPC*RLSCCK
Trigger: CTTACAGCATGAGAGCCGCCAGCAGGGCTTTGACCT...GCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp ATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCAGTCTGCAGAGAGCTGGGGAGTaGGGTTCCCTCACTGTACAC +
Preference number: 4 (lower is better)
Translates to: IGSSPRQASRSEGLTGSLQRAGE*GSLTVH
Trigger: GTGTACAGTGAGGGAACCCCACTCCCCAGCTCTCTG...CAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp AGGCACACATACGCAGCACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCGAAGTTCACAGCCCTTaGCTGACCACCCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: RHTYAAHVPCAPKASGTPEVHSP*LTTLQS
Trigger: GGACTGGAGGGTGGTCAGCCAAGGGCTGTGAACTTC...GGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTGCTGCGTATGTGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TCCCTCTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCGCCGAATGGCTGCACTaGCAAGTGACGTGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: SLWRHLWLWHFVRVWALSAEWLH*QVTWVR
Trigger: CCGGACCCACGTCACTTGCCAGTGCAGCCATTCGGC...GCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp ATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCAGTCTGAGGCGAAGGTGCCCATaGAGACGTAGTGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: IGSSPRQASRSEGLTGSLRRRCP*RRSAGG
Trigger: TCCTCCTGCACTACGTCTCCATGGGCACCTTCGCCT...CAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTATGTGCGGGAGGATGTaGGGCTCTGCTCACAATCAG +
Preference number: 4 (lower is better)
Translates to: WPWLHRGSQWAGHSSPWCMCGRM*GSAHNQ
Trigger: CTGATTGTGAGCAGAGCCCCACATCCTCCCGCACAT...ACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCATGTGCGGGAGGATGTaGGGCTCTGCTCACAATCAG +
Preference number: 4 (lower is better)
Translates to: CPIGSSPRQASRSEGLTGMCGRM*GSAHNQ
Trigger: CTGATTGTGAGCAGAGCCCCACATCCTCCCGCACAT...GCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR CCA 90 bp CAGCTTGGTGAGAAGTCCTGGCCTTTGACCGCCTCGCTGAGGTTCTCCATTCCGGAGATGCTCACGGCCTaGCTCCCTCCTCGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: QLGEKSWPLTASLRFSIPEMLTA*LPPRSL
Trigger: AAGACTCCGAGGAGGGAGCCAGGCCGTGAGCATCTC...CGGAATGGAGAACCTCAGCGAGGCGGTCAAAGGCCAGGACTTCTCACCAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp AAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGAGATGCTCACGGCCTaGCTCCCTCCTCGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: KVPACPIGSSPRQASRSEEMLTA*LPPRSL
Trigger: AAGACTCCGAGGAGGGAGCCAGGCCGTGAGCATCTC...CTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR TCA 90 bp ATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGTTACATCCAGCACTGTaGTGGACACGCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: MAGTLTQGACLSHRQQSQLHPAL*WTRWQR
Trigger: CCTCTGCCAGCGTGTCCATCACAGTGCTGGATGTAA...CTGGGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp GCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGAGTGCAGAGAGCGGTaGCACTGTGGATACCATCTG +
Preference number: 4 (lower is better)
Translates to: ACPIGSSPRQASRSEGLTECRER*HCGYHL
Trigger: CAGATGGTATCCACAGTGTCACCGCTCTCTGCACTC...GGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp TGTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGACCGGTCAGATCCAGTaGCTTCTTGGAGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: CHWSDFRGGAPCLPREPWTGQIQ*LLGAAL
Trigger: CAGAGCGGCTCCAAGAAGTCACTGGATCTGACCGGT...CCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp AAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGCACTCCTCAGTTCTATaGGCAGGTGATGCCACCCCC +
Preference number: 4 (lower is better)
Translates to: KVPACPIGSSPRQASRSEHSSVL*AGDATP
Trigger: GGGGGTGGCATCACCTGCTCATAGAACTGAGGAGTG...CTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CCAGCTGCTATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGACGATAGCGCATGTTTaGGTTGGAAGGGGCATCCCC +
Preference number: 4 (lower is better)
Translates to: PAAMAGTLTQGACLSHRQTIAHV*VGRGIP
Trigger: GGGGATGCCCCTTCCAACGCAAACATGCGCTATCGT...CTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR GCA 90 bp CGTAGAGCCAGCTGCTATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCAAACGTGAGCTGCAGCTaGTCCTCCACAATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRASCYGRDPHTRCLLVPNVSCS*SSTISR
Trigger: CCTGGAGATTGTGGAGGAGCAGCTGCAGCTCACGTT...TGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGGCTCTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp GGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCAGTCTGTGGGGCCATTGGTCTTGTTaGAGTCGGGATCAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: GSSPRQASRSEGLTGSLWGHWSC*SRDQSL
Trigger: AAGGCTTTGATCCCGACTGCAACAAGACCAATGGCC...CCACAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp GCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGTGTCTCCTCCGTCTaGTGGATGAGGTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: ACPIGSSPRQASRSEGLTGVSSV*WMRFPS
Trigger: AGAGGGAAACCTCATCCAGCAGACGGAGGAGACACC...GGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp GACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTACTCGCCCAGGGCGGTaGGGAGCATGTCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: DGAMPALMKSTSPSGDICTRPGR*GACLAL
Trigger: AAGGGCCAGACATGCTCCGCACCGCCCTGGGCGAGT...ACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp ATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGTTGGCCAGAGCATCTaGTTTTGGGGTGCTATGGGC +
Preference number: 4 (lower is better)
Translates to: MAGTLTQGACLSHRQQSQVGQSI*FWGAMG
Trigger: GCCCATAGCACCCCAAAAGCAGATGCTCTGGCCAAC...CTGGGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000239489.2
CDS-3UTR CCA 90 bp GGCCAGCGGAACACCCACACTCCCTGGCCGGAAGCAGCTGCAGAAGCTGTGTCACAACCGGAGCTGTTGTaGATTTGGAAGGGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: GQRNTHTPWPEAAAEAVSQPELL*IWKGKS
Trigger: AGACTTCCCCTTCCAAATCCACAACAGCTCCGGTTG...TGACACAGCTTCTGCAGCTGCTTCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp TGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCTCTGTAGCAGAGACCTaGAGGACACTGGTAGATGGG +
Preference number: 4 (lower is better)
Translates to: CPIGSSPRQASRSEGLTGSVAET*RTLVDG
Trigger: CCCATCTACCAGTGTCCTCCAGGTCTCTGCTACAGA...GCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp ATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCAGTCTGGAGCGAACGTTCACCTaGCAATGCTCCCCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: IGSSPRQASRSEGLTGSLERTFT*QCSPVK
Trigger: CTTCACTGGGGAGCATTGCCAGGTGAACGTTCGCTC...CAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTAACGAAGGACTGGGGTaGGAAGCTCCTGGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: VTLYPCHPWATWASRQPLNEGLG*EAPGAH
Trigger: GTGAGCACCAGGAGCTTCCCACCCCAGTCCTTCGTT...AAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GGGCGTGGGGGTGGCAGGGTGGTCAGAGTTTCATATCATAGCTATGGCGCCCACAAGGTAACGAAGGACTaGGGTGGGAAGCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GRGGGRVVRVSYHSYGAHKVTKD*GGKLLV
Trigger: CACCAGGAGCTTCCCACCCCAGTCCTTCGTTACCTT...GTGGGCGCCATAGCTATGATATGAAACTCTGACCACCCTGCCACCCCCACGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TCCCTCTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCAGGGAGACGGTGAAGTaGAAGCGTTGCCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SLWRHLWLWHFVRVWALSRETVK*KRCRRP
Trigger: AGGCCTGCGGCAACGCTTCCACTTCACCGTCTCCCT...GCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp ATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGGGTGGCAATGTTGGTaGACGTCTCTCCCATCCTCA +
Preference number: 4 (lower is better)
Translates to: MAGTLTQGACLSHRQQSQGWQCW*TSLPSS
Trigger: TGAGGATGGGAGAGACGTCCACCAACATTGCCACCC...CTGGGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGCATGGCACCGCTGCTaGCTGCCCAAATTTCGTCTG +
Preference number: 4 (lower is better)
Translates to: VTLYPCHPWATWASRQPLAWHRC*LPKFRL
Trigger: CAGACGAAATTTGGGCAGCCAGCAGCGGTGCCATGC...AAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTACTCAGCCCTGGGCTCTaGTTGTGCCGTGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LETSVALALCQSLGPELLLSPGL*LCREWG
Trigger: ACCCCACTCACGGCACAACCAGAGCCCAGGGCTGAG...TAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTCAGAGAGCTGGGGAGTaGGGTTCCCTCACTGTACAC +
Preference number: 4 (lower is better)
Translates to: VTLYPCHPWATWASRQPLQRAGE*GSLTVH
Trigger: GTGTACAGTGAGGGAACCCCACTCCCCAGCTCTCTG...AAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GGCGTGGGGGTGGCAGGGTGGTCAGAGTTTCATATCATAGCTATGGCGCCCACTGAAGTTCACAGCCCTTaGCTGACCACCCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GVGVAGWSEFHIIAMAPTEVHSP*LTTLQS
Trigger: GGACTGGAGGGTGGTCAGCCAAGGGCTGTGAACTTC...AGTGGGCGCCATAGCTATGATATGAAACTCTGACCACCCTGCCACCCCCACGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGATGCTGTGCAGGTTaGAGCGCAGTGTCCGAACGA +
Preference number: 4 (lower is better)
Translates to: VTLYPCHPWATWASRQPLGCCAG*SAVSER
Trigger: TCGTTCGGACACTGCGCTCCAACCTGCACAGCATCC...AAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCCGTGGTAGAACCGCATaGGCCCAGTGTCGATGTTGC +
Preference number: 4 (lower is better)
Translates to: CARSLCILAILGLPGPPVRGRTA*AQCRCC
Trigger: GCAACATCGACACTGGGCCCATGCGGTTCTACCACG...GACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTACCTTTCCGCTGCTCCTaGGGCTGGCTGCTAAGCACG +
Preference number: 4 (lower is better)
Translates to: LETSVALALCQSLGPELLPFRCS*GWLLST
Trigger: CGTGCTTAGCAGCCAGCCCCAGGAGCAGCGGAAAGG...TAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR TCA 90 bp TCCCTCTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTTGGATGTGCAGGACTaGGTGGCCGAGGGGCACATT +
Preference number: 4 (lower is better)
Translates to: SLWRHLWLWHFVRVWALSLDVQD*VAEGHI
Trigger: AATGTGCCCCTCGGCCACTCAGTCCTGCACATCCAA...GCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp AAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGTCTCCAGGCGGACAGTaGTGCTGTTGGTCAGCATGT +
Preference number: 4 (lower is better)
Translates to: KVPACPIGSSPRQASRSESPGGQ*CCWSAC
Trigger: ACATGCTGACCAACAGCATCACTGTCCGCCTGGAGA...CTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp AACATTGGCAGGAAGGACCGTGACAGCGTGGAAGACCTCTGGGCTCCCTCAGAACACTCCTCAGTTCTATaGGCAGGTGATGCCACCCCC +
Preference number: 4 (lower is better)
Translates to: NIGRKDRDSVEDLWAPSEHSSVL*AGDATP
Trigger: GGGGGTGGCATCACCTGCTCATAGAACTGAGGAGTG...TTCTGAGGGAGCCCAGAGGTCTTCCACGCTGTCACGGTCCTTCCTGCCAATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp CGTAGAGCCAGCTGCTATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCACTTGGGAGCTCTTCCTaGATGTCCTCAAACCTTGGC +
Preference number: 4 (lower is better)
Translates to: RRASCYGRDPHTRCLLVPLGSSS*MSSNLG
Trigger: GCCAAGGTTTGAGGACATTCAGGAAGAGCTCCCAAG...TGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGGCTCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp GCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCCAAATCAGGGTATCCTaGAGGGACAGCCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ACPIGSSPRQASRSEGLTQIRVS*RDSQQK
Trigger: CTTCTGCTGGCTGTCCCTTCAGGATACCCTGATTTG...GGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp ATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGCAAATCAGGGTATCCTaGAGGGACAGCCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: MAGTLTQGACLSHRQQSQQIRVS*RDSQQK
Trigger: CTTCTGCTGGCTGTCCCTTCAGGATACCCTGATTTG...CTGGGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp GTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGATGCCCTGCAAGCAGCTaGAGGCAGCAAAGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: VIGQISGVEHPACLESPGCPASS*RQQRGS
Trigger: ACTACCTCTTTGCTGCCTTCAGCTGCTTGCAGGGCA...TCCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp AAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCCAGAGGACACACTaGGTTTCTGGACCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: KVPACPIGSSPRQASRSEGQRTH*VSGPLH
Trigger: ATGAAGGGGTCCAGAAACTCAGTGTGTCCTCTGGCC...CTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CACACATACGCAGCACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCACAGCAGGTTCACGCAGGTaGCCCCGTTTTTGCATACTC +
Preference number: 4 (lower is better)
Translates to: HTYAAHVPCAPKASGTPTAGSRR*PRFCIL
Trigger: GAGTATGCAAAAACGGGGGCACCTGCGTGAACCTGC...TGTGGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTGCTGCGTATGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp AAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGAACGTGAGCTGCAGCTaGTCCTCCACAATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KVPACPIGSSPRQASRSENVSCS*SSTISR
Trigger: CCTGGAGATTGTGGAGGAGCAGCTGCAGCTCACGTT...CTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TCCCCTGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCCATCCTCACTCCCTaGATACAGCCTCGGAAACCA +
Preference number: 4 (lower is better)
Translates to: SPVLGHSVSLPSLGYLGLPILTP*IQPRKP
Trigger: TGGTTTCCGAGGCTGTATGCAGGGAGTGAGGATGGG...GAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCGGCCATTGGTCTTGTTaGAGTCGGGATCAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: CPIGSSPRQASRSEGLTGGHWSC*SRDQSL
Trigger: AAGGCTTTGATCCCGACTGCAACAAGACCAATGGCC...GCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp GTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTTCTGTGGCCACCAGATaGCAGCCTCAAATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VTLYPCHPWATWASRQPLSVATR*QPQMLW
Trigger: CCAGAGCATTTGAGGCTGGCATCTGGTGGCCACAGA...AAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTGGGTTCCTCAGAGCCTTTaGCAGCCGCAGGGACCGGTT +
Preference number: 4 (lower is better)
Translates to: RSYASLNEVHVSLWRHLWVPQSL*QPQGPV
Trigger: AACCGGTCCCTGCGGCTGGCAAAGGCTCTGAGGAAC...CCACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TGTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGGGTGTCTCCTCCGTCTaGTGGATGAGGTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CHWSDFRGGAPCLPREPWGVSSV*WMRFPS
Trigger: AGAGGGAAACCTCATCCAGCAGACGGAGGAGACACC...CCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp AGGCACACATACGCAGCACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCTTCTTGTGGATGCTGTaGAGGTTGGAGCGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RHTYAAHVPCAPKASGTPFLWML*RLERSV
Trigger: GACACTGCGCTCCAACCTGCACAGCATCCACAAGAA...GGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTGCTGCGTATGTGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp GGCGTGGGGGTGGCAGGGTGGTCAGAGTTTCATATCATAGCTATGGCGCCCACTGAGGATGTGGGGCTCTaGTCACAATCAGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GVGVAGWSEFHIIAMAPTEDVGL*SQSASF
Trigger: GAAGCTGGCTGATTGTGAGCAGAGCCCCACATCCTC...AGTGGGCGCCATAGCTATGATATGAAACTCTGACCACCCTGCCACCCCCACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp AAGGACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCCTGTCCAGCCGGCGCTaGGTACGGATCACACCAGAC +
Preference number: 4 (lower is better)
Translates to: KDGAMPALMKSTSPSGDILSSRR*VRITPD
Trigger: GTCTGGTGTGATCCGTACCCAGCGCCGGCTGGACAG...GATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp CACACATACGCAGCACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCACAGTCAGGCAACTCCGGTaGGTTGTCATTCTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: HTYAAHVPCAPKASGTPTVRQLR*VVILVQ
Trigger: CTGGACCAGAATGACAACCCACCGGAGTTGCCTGAC...TGTGGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTGCTGCGTATGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp CAGCTTGGTGAGAAGTCCTGGCCTTTGACCGCCTCGCTGAGGTTCTCCATTCCGAAGGTAACGAAGGACTaGGGTGGGAAGCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QLGEKSWPLTASLRFSIPKVTKD*GGKLLV
Trigger: CACCAGGAGCTTCCCACCCCAGTCCTTCGTTACCTT...CGGAATGGAGAACCTCAGCGAGGCGGTCAAAGGCCAGGACTTCTCACCAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTCGTTCCTGTCCTGGGTaGCAAACGCCAGGGAGACGG +
Preference number: 4 (lower is better)
Translates to: DGAMPALMKSTSPSGDICRSCPG*QTPGRR
Trigger: CCGTCTCCCTGGCGTTTGCCACCCAGGACAGGAACG...ACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CAGCTTGGTGAGAAGTCCTGGCCTTTGACCGCCTCGCTGAGGTTCTCCATTCCGTCAGGGTGGCAATGTTaGTGGACGTCTCTCCCATCC +
Preference number: 4 (lower is better)
Translates to: QLGEKSWPLTASLRFSIPSGWQC*WTSLPS
Trigger: GGATGGGAGAGACGTCCACCAACATTGCCACCCTGA...CGGAATGGAGAACCTCAGCGAGGCGGTCAAAGGCCAGGACTTCTCACCAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGACTTGAAGGTGTCAGCTaGGAAGGACACGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: VIGQISGVEHPACLESPGLEGVS*EGHGGL
Trigger: GAGTCCTCCGTGTCCTTCCCAGCTGACACCTTCAAG...TCCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GGACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGCAGAGCATCTGCTTTTaGGGTGCTATGGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GRSYASLNEVHVSLWRHLQSICF*GAMGGA
Trigger: GGCCCCGCCCATAGCACCCCAAAAGCAGATGCTCTG...CAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000239489.2
CDS-3UTR TCA 90 bp GGACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGACCGGTCAGATCCAGTaGCTTCTTGGAGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: GRSYASLNEVHVSLWRHLTGQIQ*LLGAAL
Trigger: CAGAGCGGCTCCAAGAAGTCACTGGATCTGACCGGT...CAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp ATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTGGGAGGGCAGGGGCTTaGGGCACATGGGTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: MASCTAWFGFCLQSKDGAGRAGA*GTWVLH
Trigger: GTGGAGGACCCATGTGCCTCAAGCCCCTGCCCTCCC...AGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp CACACATACGCAGCACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCACACTTGGGAGCTCTTCCTaGATGTCCTCAAACCTTGGC +
Preference number: 4 (lower is better)
Translates to: HTYAAHVPCAPKASGTPTLGSSS*MSSNLG
Trigger: GCCAAGGTTTGAGGACATTCAGGAAGAGCTCCCAAG...TGTGGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTGCTGCGTATGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp AAGGACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCCCTCCGTCTGCTGGATaGGGTTTCCCTCTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: KDGAMPALMKSTSPSGDIPPSAG*GFPLSP
Trigger: AGGGCTGAGAGGGAAACCTCATCCAGCAGACGGAGG...GATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTGGGTAGTCCAGGGGCAGTaGCAAGGTGATAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: RSYASLNEVHVSLWRHLWVVQGQ*QGDKAT
Trigger: GGTGGCCTTATCACCTTGGCACTGCCCCTGGACTAC...CCACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR GCA 90 bp AAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGTGGGAAGCTCCTGGTaGTCACTTCACAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: KVPACPIGSSPRQASRSEVGSSW*SLHSRD
Trigger: ATCCCTACTGTGAAGTGAGCACCAGGAGCTTCCCAC...CTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp GTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTACCCTCTGTCACAGATaGAGGAGTAGCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: VTLYPCHPWATWASRQPLTLCHR*RSSCPM
Trigger: CATGGGACAGCTACTCCTGCATCTGTGACAGAGGGT...AAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp AAGGACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCGGCACCGCTGCTGGCTaGCCAAATTTCGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KDGAMPALMKSTSPSGDIGTAAG*PNFVCG
Trigger: GCCACAGACGAAATTTGGGCAGCCAGCAGCGGTGCC...GATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TGTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGGAAGCTGGTAGGCCGTaGGCACATCATTGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: CHWSDFRGGAPCLPREPWEAGRP*AHHCQR
Trigger: TCTTTGGCAATGATGTGCGCACGGCCTACCAGCTTC...CCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TCCCCTGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCTCTCATGCTGTAAGATaGGGGCCAGAAGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: SPVLGHSVSLPSLGYLGLSHAVR*GPEAGR
Trigger: CCTACCAGCTTCTGGCCCGCATCTTACAGCATGAGA...GAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TCCCTCTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCAAATGCCTCAGTAGCTaGGCTGCACCAGCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: SLWRHLWLWHFVRVWALSKCLSS*AAPASL
Trigger: AAGCGAGGCTGGTGCAGCGCAGCTACTGAGGCATTT...GCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TCACACAAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTTCTTGTGGATGCTGTaGAGGTTGGAGCGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SHKVPACPIGSSPRQASRFLWML*RLERSV
Trigger: GACACTGCGCTCCAACCTGCACAGCATCCACAAGAA...CCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp ATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTGCACTTCTGTCAGCATaGGGTAGACATGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: ILAILGLPGPPVSLLAVRALLSA*GRHASS
Trigger: AGAACTTGCATGTCTACCGCATGCTGACAGAAGTGC...ACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp ATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTCCTAGGGATGAAGGATaGATCTGGTTCTCCATGGTT +
Preference number: 4 (lower is better)
Translates to: ILAILGLPGPPVSLLAVRPRDEG*IWFSMV
Trigger: AACCATGGAGAACCAGATGCATCCTTCATCCCTAGG...ACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TCACCTTCTGAGGTGGCGTGGGTTGCGGAGTTGTCACGGTGCTGTACCTCCTGGCTTTGTTTTTCAGGATaGCTTTCCGCTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPSEVAWVAELSRCCTSWLCFSG*LSAAPG
Trigger: CCCAGGAGCAGCGGAAAGGCATCCTGAAAAACAAAG...CCAGGAGGTACAGCACCGTGACAACTCCGCAACCCACGCCACCTCAGAAGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TCCCTCTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCGAGGATGTGGGGCTCTaGTCACAATCAGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLWRHLWLWHFVRVWALSEDVGL*SQSASF
Trigger: GAAGCTGGCTGATTGTGAGCAGAGCCCCACATCCTC...GCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR CCA 90 bp CTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTATGCCAGAGGCCACCGCCGCTCTaGCTGCTGAGTGCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: LVQHGLDSVFSLRTELCQRPPPL*LLSAKR
Trigger: CCGCTTCGCACTCAGCAGCCAGAGCGGCGGTGGCCT...CTGGCATAGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp GTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCGTCCTTCTCAAACACTaGGGGGTTGTCGTTAATGTC +
Preference number: 4 (lower is better)
Translates to: VPACPIGSSPRQASRSEGVLLKH*GVVVNV
Trigger: GACATTAACGACAACCCCCCAGTGTTTGAGAAGGAC...GCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp TCCTTGGGCAATAGAGTGAGATGCCATTTCATGGCTCTCCAGTGGCTGCAGAGTGACGGATGTGCACGGTaGCCCGGCTTACCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SLGNRVRCHFMALQWLQSDGCAR*PGLPEE
Trigger: CTCCTCTGGTAAGCCGGGCCACCGTGCACATCCGTC...ACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCTCACTCTATTGCCCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp TCCCCTGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCTTTTGCATACTCCACTaGCACAGCGGCCTGAGCGAA +
Preference number: 4 (lower is better)
Translates to: SPVLGHSVSLPSLGYLGLFCILH*HSGLSE
Trigger: TTCGCTCAGGCCGCTGTGCCAGTGGAGTATGCAAAA...GAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TCCCTCTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCGGGTGGCAATGTTGGTaGACGTCTCTCCCATCCTCA +
Preference number: 4 (lower is better)
Translates to: SLWRHLWLWHFVRVWALSGWQCW*TSLPSS
Trigger: TGAGGATGGGAGAGACGTCCACCAACATTGCCACCC...GCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GCTCTGGCTCAATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTACGATGCCTCTGTAGCTaGGGCCAGGAGGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: ALAQWPLVQHGLDSVFSLRCLCS*GQEGAA
Trigger: GGCAGCGCCCTCCTGGCCCCAGCTACAGAGGCATCG...TAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCATTGAGCCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTATGCCAGGTCGGGCCAGCCAGCTaGGACGTGGTTGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LVQHGLDSVFSLRTELCQVGPAS*DVVGQS
Trigger: GCTCTGGCCAACCACGTCCCAGCTGGCTGGCCCGAC...CTGGCATAGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GACCGGCAGTCTGTGGGGTTGACTGTGCCTCATGGTTTCCTGATGGTTCAAATTGCTAAGCACGGCCACTaGCTTGGCCAGGACCCCACT +
Preference number: 4 (lower is better)
Translates to: DRQSVGLTVPHGFLMVQIAKHGH*LGQDPT
Trigger: AGTGGGGTCCTGGCCAAGCCAGTGGCCGTGCTTAGC...AATTTGAACCATCAGGAAACCATGAGGCACAGTCAACCCCACAGACTGCCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
CDS-3UTR CCA 90 bp GACCGGCAGTCTGTGGGGTTGACTGTGCCTCATGGTTTCCTGATGGTTCAAATTCCTTTCCGCTGCTCCTaGGGCTGGCTGCTAAGCACG +
Preference number: 4 (lower is better)
Translates to: DRQSVGLTVPHGFLMVQIPFRCS*GWLLST
Trigger: CGTGCTTAGCAGCCAGCCCCAGGAGCAGCGGAAAGG...AATTTGAACCATCAGGAAACCATGAGGCACAGTCAACCCCACAGACTGCCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
CDS-3UTR TCA 90 bp ATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTTGGCTGACAGCACAGTaGCAGGGGCCACACACCGGG +
Preference number: 4 (lower is better)
Translates to: MASCTAWFGFCLQSKDGAWLTAQ*QGPHTG
Trigger: CCCGGTGTGTGGCCCCTGTCACTGTGCTGTCAGCCA...AGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp CGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTGGTCTCGTTCAAGGCCTTaGGGTCCACAAAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RSYASLNEVHVSLWRHLWSRSRP*GPQRSQ
Trigger: CTGGCTCCTTTGTGGACCTCAAGGCCTTGAACGAGA...CCACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TCACACAAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGAGGGCGATGAAGTCATaGTTCTCATTGAAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SHKVPACPIGSSPRQASRRAMKS*FSLKRP
Trigger: TGGCCGCTTCAATGAGAAGCATGACTTCATCGCCCT...CCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp GGACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTCTGTGGCCACCAGATaGCAGCCTCAAATGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GRSYASLNEVHVSLWRHLSVATR*QPQMLW
Trigger: CCAGAGCATTTGAGGCTGGCATCTGGTGGCCACAGA...CAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTGTCGAAGATGTCAACTaGAAGAATCATGTTGGCGGT +
Preference number: 4 (lower is better)
Translates to: WPWLHRGSQWAGHSSPWCVEDVN*KNHVGG
Trigger: ACCGCCAACATGATTCTTGCAGTTGACATCTTCGAC...ACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CCAGCTGCTATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGGCACTTCTGTCAGCATaGGGTAGACATGCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: PAAMAGTLTQGACLSHRQALLSA*GRHASS
Trigger: AGAACTTGCATGTCTACCGCATGCTGACAGAAGTGC...CTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTGGGTTGGCCAGAGCATCTaGTTTTGGGGTGCTATGGGC +
Preference number: 4 (lower is better)
Translates to: RSYASLNEVHVSLWRHLWVGQSI*FWGAMG
Trigger: GCCCATAGCACCCCAAAAGCAGATGCTCTGGCCAAC...CCACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000239489.2
CDS-3UTR GCA 90 bp TGTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGCTTTGTTTTTCAGGATaGCTTTCCGCTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CHWSDFRGGAPCLPREPWLCFSG*LSAAPG
Trigger: CCCAGGAGCAGCGGAAAGGCATCCTGAAAAACAAAG...CCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TGTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGAGACTGCTCAAAGACTaGGCTGTGGTCGTTAGTGTC +
Preference number: 4 (lower is better)
Translates to: CHWSDFRGGAPCLPREPWRLLKD*AVVVSV
Trigger: GACACTAACGACCACAGCCCAGTCTTTGAGCAGTCT...CCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp TCCCTCTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCGAGCTGTTGTGGATTTaGAAGGGGAAGTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SLWRHLWLWHFVRVWALSELLWI*KGKSGA
Trigger: TGCCCCAGACTTCCCCTTCCAAATCCACAACAGCTC...GCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp TGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTATGAGGGTCAAGGGTTTTGCATACTCCACTaGCACAGCGGCCTGAGCGAA +
Preference number: 4 (lower is better)
Translates to: WLWHFVRVWALSSYEGQGFCILH*HSGLSE
Trigger: TTCGCTCAGGCCGCTGTGCCAGTGGAGTATGCAAAA...CCCTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTGAGATTCCAAAAAGTCTTCTGGCAGGTTaGGGACACCACCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: HRGSQWAGHSSPWCEIPKSLLAG*GHHPEA
Trigger: TGCTTCTGGGTGGTGTCCCCAACCTGCCAGAAGACT...TTTTGGAATCTCACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTCAGCCTCGGAAACCATaGCGGACAGAGACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: DGAMPALMKSTSPSGDICQPRKP*RTETLS
Trigger: GGACAAGGTCTCTGTCCGCCATGGTTTCCGAGGCTG...ACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TCACCTTCTGAGGTGGCGTGGGTTGCGGAGTTGTCACGGTGCTGTACCTCCTGGCATTCATGTTCAGGGTaGCAATGTTGGTGGACGTCT +
Preference number: 4 (lower is better)
Translates to: SPSEVAWVAELSRCCTSWHSCSG*QCWWTS
Trigger: AGACGTCCACCAACATTGCCACCCTGAACATGAATG...CCAGGAGGTACAGCACCGTGACAACTCCGCAACCCACGCCACCTCAGAAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTGAGATTCCAAAACCCAAATTTCGTCTGTaGCCACCAGATGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: HRGSQWAGHSSPWCEIPKPKFRL*PPDASL
Trigger: GAGGCTGGCATCTGGTGGCCACAGACGAAATTTGGG...TTTTGGAATCTCACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp ATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGATGAAGGATGCATCTaGTTCTCCATGGTTACCACG +
Preference number: 4 (lower is better)
Translates to: MAGTLTQGACLSHRQQSQDEGCI*FSMVTT
Trigger: CGTGGTAACCATGGAGAACCAGATGCATCCTTCATC...CTGGGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTAATGTGCGGGAGGATGTaGGGCTCTGCTCACAATCAG +
Preference number: 4 (lower is better)
Translates to: LETSVALALCQSLGPELLMCGRM*GSAHNQ
Trigger: CTGATTGTGAGCAGAGCCCCACATCCTCCCGCACAT...TAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR TCA 90 bp TTTCATCTCACCAGTCAGTCACTAGCAGTCCTGTGCACTTCTGAGAGCACAGCTGGAGCTCATGGCTGGTaGGCCATGGTCCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: FHLTSQSLAVLCTSESTAGAHGW*AMVHCF
Trigger: GAAGCAGTGGACCATGGCTCACCAGCCATGAGCTCC...AGCTGTGCTCTCAGAAGTGCACAGGACTGCTAGTGACTGACTGGTGAGATGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp GGCGTGGGGGTGGCAGGGTGGTCAGAGTTTCATATCATAGCTATGGCGCCCACTCCACGATCTGATACATaGTCTGAGCATTCGGACCTT +
Preference number: 4 (lower is better)
Translates to: GVGVAGWSEFHIIAMAPTPRSDT*SEHSDL
Trigger: AAGGTCCGAATGCTCAGATCATGTATCAGATCGTGG...AGTGGGCGCCATAGCTATGATATGAAACTCTGACCACCCTGCCACCCCCACGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR GCA 90 bp AACATTGGCAGGAAGGACCGTGACAGCGTGGAAGACCTCTGGGCTCCCTCAGAAAGGGCGATGAAGTCATaGTTCTCATTGAAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: NIGRKDRDSVEDLWAPSERAMKS*FSLKRP
Trigger: TGGCCGCTTCAATGAGAAGCATGACTTCATCGCCCT...TTCTGAGGGAGCCCAGAGGTCTTCCACGCTGTCACGGTCCTTCCTGCCAATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TTTCATCTCACCAGTCAGTCACTAGCAGTCCTGTGCACTTCTGAGAGCACAGCTGGCTTGCAGGCACACTaGCCAGTGTCCATGTCGCAG +
Preference number: 4 (lower is better)
Translates to: FHLTSQSLAVLCTSESTAGLQAH*PVSMSQ
Trigger: CTGCGACATGGACACTGGGCAGTGTGCCTGCAAGCC...AGCTGTGCTCTCAGAAGTGCACAGGACTGCTAGTGACTGACTGGTGAGATGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CCATGTCTTGTAGGCTTTCATCTCACCAGTCAGTCACTAGCAGTCCTGTGCACTGGCACCGCTGCTGGCTaGCCAAATTTCGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PCLVGFHLTSQSLAVLCTGTAAG*PNFVCG
Trigger: GCCACAGACGAAATTTGGGCAGCCAGCAGCGGTGCC...AGTGCACAGGACTGCTAGTGACTGACTGGTGAGATGAAAGCCTACAAGACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp ATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTTTCTCCCCGCTGCAGTaGCGGACTGCGTTACCCACG +
Preference number: 4 (lower is better)
Translates to: MASCTAWFGFCLQSKDGAFSPLQ*RTALPT
Trigger: CGTGGGTAACGCAGTCCGGCACTGCAGCGGGGAGAA...AGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CCATGTCTTGTAGGCTTTCATCTCACCAGTCAGTCACTAGCAGTCCTGTGCACTACCAGGATAGGCCTCTaGAGAGAGCTGGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PCLVGFHLTSQSLAVLCTTRIGL*RELGSG
Trigger: CCCACTCCCCAGCTCTCTGCAGAGGCCTATCCTGGT...AGTGCACAGGACTGCTAGTGACTGACTGGTGAGATGAAAGCCTACAAGACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TGTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGATACACAGACAGGTTTaGTTCGTTCCTCCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: CHWSDFRGGAPCLPREPWIHRQV*FVPPSP
Trigger: TGGAGACGGAGGAACGAAGCAAACCTGTCTGTGTAT...CCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTGAGATTCCAAAAAGGACAAAGATGCCCTaGAAGCAGCTGAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: HRGSQWAGHSSPWCEIPKRTKMP*KQLKAA
Trigger: TGCTGCCTTCAGCTGCTTGCAGGGCATCTTTGTCCT...TTTTGGAATCTCACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp AAGGACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCATGTGCAGGACTGAGTaGCCGAGGGGCACATTCTCT +
Preference number: 4 (lower is better)
Translates to: KDGAMPALMKSTSPSGDIMCRTE*PRGTFS
Trigger: AGAGAATGTGCCCCTCGGCCACTCAGTCCTGCACAT...GATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp TCCTTGGGCAATAGAGTGAGATGCCATTTCATGGCTCTCCAGTGGCTGCAGAGTTCTGGAGATGGAGCCTaGAAGACGTGCCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SLGNRVRCHFMALQWLQSSGDGA*KTCQLW
Trigger: CCACAGCTGGCACGTCTTCCAGGCTCCATCTCCAGA...ACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCTCACTCTATTGCCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TTTGTCAGAGTCTGGGCCCTGAGCTCCTATGAGGGTCAAGGGCTTCCCGTCTGGCAGCCTCAAATGCTCTaGGACACCCATTGTAGATCA +
Preference number: 4 (lower is better)
Translates to: FVRVWALSSYEGQGLPVWQPQML*DTHCRS
Trigger: TGATCTACAATGGGTGTCCCAGAGCATTTGAGGCTG...CCAGACGGGAAGCCCTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GTTGACTCATTCCAGATTCAAGTACAACTGTGCAAGCTTCCTTGGGCAATAGAGCGATGCCTCTGTAGCTaGGGCCAGGAGGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: VDSFQIQVQLCKLPWAIERCLCS*GQEGAA
Trigger: GGCAGCGCCCTCCTGGCCCCAGCTACAGAGGCATCG...CTCTATTGCCCAAGGAAGCTTGCACAGTTGTACTTGAATCTGGAATGAGTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp AGATGCCATTTCATGGCTCTCCAGTGGCTGCAGAGTCAAAGCAGTGTAAAGCATGCCGAATGGCTGCACTaGCAAGTGACGTGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: RCHFMALQWLQSQSSVKHAEWLH*QVTWVR
Trigger: CCGGACCCACGTCACTTGCCAGTGCAGCCATTCGGC...ATGCTTTACACTGCTTTGACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp AAGGACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCCTGTGGGCCACGCAGTaGAACAGGAGGACAAAGATG +
Preference number: 4 (lower is better)
Translates to: KDGAMPALMKSTSPSGDILWATQ*NRRTKM
Trigger: CATCTTTGTCCTCCTGTTCCACTGCGTGGCCCACAG...GATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp GCTCTGGCTCAATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGCGGGGAAGTTGGTaGTGGCCTCAAGCACCGAAG +
Preference number: 4 (lower is better)
Translates to: ALAQWPLVQHGLDSVFSLRRGSW*WPQAPK
Trigger: CTTCGGTGCTTGAGGCCATCACCAACTTCCCCGCCT...TAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCATTGAGCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp AAAAAGAATGTGGTAACCATTGAAAACGGGCACTCTGGCTTTGTTTCTTTGCACGCGCGCGCAGTTCGATaGCCGCAGTGCCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KKNVVTIENGHSGFVSLHARAVR*PQCPQA
Trigger: AGCCTGCGGGCACTGCGGTCATCGAACTGCGCGCGC...GTGCAAAGAAACAAAGCCAGAGTGCCCGTTTTCAATGGTTACCACATTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp CGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTGGCATAGCGCTTCTCACTaGACTGGGGGTAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: RSYASLNEVHVSLWRHLWHSASH*TGGSCH
Trigger: ATGACAACTACCCCCAGTTCAGTGAGAAGCGCTATG...CCACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp GCTCTGGCTCAATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAGGAATGCCATTGTCCTaGGCCGTGATGGCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: ALAQWPLVQHGLDSVFSLGMPLS*AVMASV
Trigger: CACGCTGGCCATCACGGCTCAGGACAATGGCATTCC...TAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCATTGAGCCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp TTTCATCTCACCAGTCAGTCACTAGCAGTCCTGTGCACTTCTGAGAGCACAGCTAGTGGAAGCCTCCAATaGGCAGGTTCACGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: FHLTSQSLAVLCTSESTASGSLQ*AGSRRC
Trigger: GCACCTGCGTGAACCTGCTCATTGGAGGCTTCCACT...AGCTGTGCTCTCAGAAGTGCACAGGACTGCTAGTGACTGACTGGTGAGATGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp TGGCTGCAGAGTCAAAGCAGTGTAAAGCATACACAGCTCCCATCTTCTCCCAAGAGTGGAAGCCTCCAATaGGCAGGTTCACGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: WLQSQSSVKHTQLPSSPKSGSLQ*AGSRRC
Trigger: GCACCTGCGTGAACCTGCTCATTGGAGGCTTCCACT...CTTGGGAGAAGATGGGAGCTGTGTATGCTTTACACTGCTTTGACTCTGCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp CTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTAAAGGCACAGAGATGGTaGTGTCAAGGTCACTCCACA +
Preference number: 4 (lower is better)
Translates to: LETSVALALCQSLGPELLKAQRW*CQGHST
Trigger: TGTGGAGTGACCTTGACATCACCATCTCTGTGCCTT...TAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp CTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTATTCATTACTGCCTTCTaGGTCAGAACCGTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LETSVALALCQSLGPELLFITAF*VRTVGL
Trigger: CAGGCCAACGGTTCTGACTCAGAAGGCAGTAATGAA...TAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR TCA 90 bp CGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTGGTTCATTACTGCCTTCTaGGTCAGAACCGTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RSYASLNEVHVSLWRHLWFITAF*VRTVGL
Trigger: CAGGCCAACGGTTCTGACTCAGAAGGCAGTAATGAA...CCACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR GCA 90 bp CGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTGGCTTTGTTTTTCAGGATaGCTTTCCGCTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RSYASLNEVHVSLWRHLWLCFSG*LSAAPG
Trigger: CCCAGGAGCAGCGGAAAGGCATCCTGAAAAACAAAG...CCACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR CCA 90 bp ATTTTTAGACAGCAATTTAAAACCCAGGGTGCCGTTGCAGAGGCACCGCTAGGCTTGGAAGGGGAAGTCTaGGGCAGAGGCAGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: IFRQQFKTQGAVAEAPLGLEGEV*GRGRVL
Trigger: GAGAACCCTGCCTCTGCCCCAGACTTCCCCTTCCAA...GCCTAGCGGTGCCTCTGCAACGGCACCCTGGGTTTTAAATTGCTGTCTAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp AACATTGGCAGGAAGGACCGTGACAGCGTGGAAGACCTCTGGGCTCCCTCAGAACAAAGATGTCATCCTTaGTGGTGGACAGTACTGTGG +
Preference number: 4 (lower is better)
Translates to: NIGRKDRDSVEDLWAPSEQRCHP*WWTVLW
Trigger: CCACAGTACTGTCCACCACCAAGGATGACATCTTTG...TTCTGAGGGAGCCCAGAGGTCTTCCACGCTGTCACGGTCCTTCCTGCCAATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp AAAAAGAATGTGGTAACCATTGAAAACGGGCACTCTGGCTTTGTTTCTTTGCACTCTCCAGACGGCCCGTaGGGCAGGCCCAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KKNVVTIENGHSGFVSLHSPDGP*GRPRWP
Trigger: TGGCCACCTGGGCCTGCCCCACGGGCCGTCTGGAGA...GTGCAAAGAAACAAAGCCAGAGTGCCCGTTTTCAATGGTTACCACATTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TTTCATCTCACCAGTCAGTCACTAGCAGTCCTGTGCACTTCTGAGAGCACAGCTCAGCCTCGGAAACCATaGCGGACAGAGACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: FHLTSQSLAVLCTSESTAQPRKP*RTETLS
Trigger: GGACAAGGTCTCTGTCCGCCATGGTTTCCGAGGCTG...AGCTGTGCTCTCAGAAGTGCACAGGACTGCTAGTGACTGACTGGTGAGATGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTATGAGGGTCAAGGGCATTCATGTTCAGGGTaGCAATGTTGGTGGACGTCT +
Preference number: 4 (lower is better)
Translates to: WLWHFVRVWALSSYEGQGHSCSG*QCWWTS
Trigger: AGACGTCCACCAACATTGCCACCCTGAACATGAATG...CCCTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTAACTGGCATTGGCCATTaGTCTTGTTGCAGTCGGGAT +
Preference number: 4 (lower is better)
Translates to: LETSVALALCQSLGPELLTGIGH*SCCSRD
Trigger: ATCCCGACTGCAACAAGACCAATGGCCAATGCCAGT...TAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp GACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTGCAAGCATCCTGGGCTaGGGGCTTGTAGTAATTCTC +
Preference number: 4 (lower is better)
Translates to: DGAMPALMKSTSPSGDICASILG*GLVVIL
Trigger: GAGAATTACTACAAGCCCCCAGCCCAGGATGCTTGC...ACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTATGAGGGTCAAGGGCAGCCTCAAATGCTCTaGGACACCCATTGTAGATCA +
Preference number: 4 (lower is better)
Translates to: WLWHFVRVWALSSYEGQGQPQML*DTHCRS
Trigger: TGATCTACAATGGGTGTCCCAGAGCATTTGAGGCTG...CCCTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TCCTTGGGCAATAGAGTGAGATGCCATTTCATGGCTCTCCAGTGGCTGCAGAGTCTTGAAGGTGTCAGCTaGGAAGGACACGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: SLGNRVRCHFMALQWLQSLEGVS*EGHGGL
Trigger: GAGTCCTCCGTGTCCTTCCCAGCTGACACCTTCAAG...ACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCTCACTCTATTGCCCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp ATTTTTAGACAGCAATTTAAAACCCAGGGTGCCGTTGCAGAGGCACCGCTAGGCTCTCGTTCAAGGCCTTaGGGTCCACAAAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: IFRQQFKTQGAVAEAPLGSRSRP*GPQRSQ
Trigger: CTGGCTCCTTTGTGGACCTCAAGGCCTTGAACGAGA...GCCTAGCGGTGCCTCTGCAACGGCACCCTGGGTTTTAAATTGCTGTCTAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp GCTCTGGCTCAATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAACCTGTTCACACAGGTaGCCCCGTTCTGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: ALAQWPLVQHGLDSVFSLTCSHR*PRSGMR
Trigger: CCTCATGCCAGAACGGGGGCACCTGTGTGAACAGGT...TAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCATTGAGCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TGGCTGCAGAGTCAAAGCAGTGTAAAGCATACACAGCTCCCATCTTCTCCCAAGGCCCAGTGTCGATGTTaGGCACTTCTGTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: WLQSQSSVKHTQLPSSPKAQCRC*ALLSAC
Trigger: GCATGCTGACAGAAGTGCGCAACATCGACACTGGGC...CTTGGGAGAAGATGGGAGCTGTGTATGCTTTACACTGCTTTGACTCTGCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CCAGCTGCTATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGTTGAAGTTTCATTACTaGCTTCTGAGTCAGAACCGT +
Preference number: 4 (lower is better)
Translates to: PAAMAGTLTQGACLSHRQLKFHY*LLSQNR
Trigger: ACGGTTCTGACTCAGAAGGCAGTAATGAAACTTCAA...CTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR CCA 90 bp GCTCTGGCTCAATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAGGTGGGCACACACAGTaGAAGCCTCCAATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ALAQWPLVQHGLDSVFSLGGHTQ*KPPMSR
Trigger: CCTGCTCATTGGAGGCTTCCACTGTGTGTGCCCACC...TAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCATTGAGCCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp AGATGCCATTTCATGGCTCTCCAGTGGCTGCAGAGTCAAAGCAGTGTAAAGCATGGGGTGGGAAGCTCCTaGTGCTCACTTCACAGTAGG +
Preference number: 4 (lower is better)
Translates to: RCHFMALQWLQSQSSVKHGVGSS*CSLHSR
Trigger: CCTACTGTGAAGTGAGCACCAGGAGCTTCCCACCCC...ATGCTTTACACTGCTTTGACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp ATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTAGGCGAAGGTGCCCATaGAGACGTAGTGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: MASCTAWFGFCLQSKDGARRRCP*RRSAGG
Trigger: TCCTCCTGCACTACGTCTCCATGGGCACCTTCGCCT...AGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp TCCTTGGGCAATAGAGTGAGATGCCATTTCATGGCTCTCCAGTGGCTGCAGAGTAAGGCACAGAGATGGTaGTGTCAAGGTCACTCCACA +
Preference number: 4 (lower is better)
Translates to: SLGNRVRCHFMALQWLQSKAQRW*CQGHST
Trigger: TGTGGAGTGACCTTGACATCACCATCTCTGTGCCTT...ACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCTCACTCTATTGCCCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp AGATGCCATTTCATGGCTCTCCAGTGGCTGCAGAGTCAAAGCAGTGTAAAGCATCAGTGTCCGAACGAGTaGGAGAAGGACAAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: RCHFMALQWLQSQSSVKHQCPNE*EKDKGH
Trigger: GTGGCCTTTGTCCTTCTCTCACTCGTTCGGACACTG...ATGCTTTACACTGCTTTGACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp AGATGCCATTTCATGGCTCTCCAGTGGCTGCAGAGTCAAAGCAGTGTAAAGCATGGCCAGAGGACACACTaGGTTTCTGGACCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: RCHFMALQWLQSQSSVKHGQRTH*VSGPLH
Trigger: ATGAAGGGGTCCAGAAACTCAGTGTGTCCTCTGGCC...ATGCTTTACACTGCTTTGACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp GCTCTGGCTCAATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTACCCATCCTCACTCCCTaGATACAGCCTCGGAAACCA +
Preference number: 4 (lower is better)
Translates to: ALAQWPLVQHGLDSVFSLPILTP*IQPRKP
Trigger: TGGTTTCCGAGGCTGTATGCAGGGAGTGAGGATGGG...TAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCATTGAGCCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CCATGTCTTGTAGGCTTTCATCTCACCAGTCAGTCACTAGCAGTCCTGTGCACTAGGACAAAGATGCCCTaGAAGCAGCTGAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PCLVGFHLTSQSLAVLCTRTKMP*KQLKAA
Trigger: TGCTGCCTTCAGCTGCTTGCAGGGCATCTTTGTCCT...AGTGCACAGGACTGCTAGTGACTGACTGGTGAGATGAAAGCCTACAAGACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp GCTCTGGCTCAATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAGAGGATGTGGGGCTCTaGTCACAATCAGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ALAQWPLVQHGLDSVFSLEDVGL*SQSASF
Trigger: GAAGCTGGCTGATTGTGAGCAGAGCCCCACATCCTC...TAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCATTGAGCCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TTTGTCAGAGTCTGGGCCCTGAGCTCCTATGAGGGTCAAGGGCTTCCCGTCTGGTTGAAGTTTCATTACTaGCTTCTGAGTCAGAACCGT +
Preference number: 4 (lower is better)
Translates to: FVRVWALSSYEGQGLPVWLKFHY*LLSQNR
Trigger: ACGGTTCTGACTCAGAAGGCAGTAATGAAACTTCAA...CCAGACGGGAAGCCCTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR CCA 90 bp TGGCTGCAGAGTCAAAGCAGTGTAAAGCATACACAGCTCCCATCTTCTCCCAAGGACGGCTACGTCTTCTaGGACTTGAACCACATAGCG +
Preference number: 4 (lower is better)
Translates to: WLQSQSSVKHTQLPSSPKDGYVF*DLNHIA
Trigger: CGCTATGTGGTTCAAGTCCCAGAAGACGTAGCCGTC...CTTGGGAGAAGATGGGAGCTGTGTATGCTTTACACTGCTTTGACTCTGCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp GCTCTGGCTCAATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAATCTCGCAGGAACCTaGGCGCGTTGTCATTGGCGT +
Preference number: 4 (lower is better)
Translates to: ALAQWPLVQHGLDSVFSLNLAGT*ARCHWR
Trigger: ACGCCAATGACAACGCGCCCAGGTTCCTGCGAGATT...TAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCATTGAGCCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp TTGAAGTTTCATTACTGCCTCTGTGTGTGGGAAGAATTGCCAGGCGTGTGGAAGATGTGCGGGAGGATGTaGGGCTCTGCTCACAATCAG +
Preference number: 4 (lower is better)
Translates to: LKFHYCLCVWEELPGVWKMCGRM*GSAHNQ
Trigger: CTGATTGTGAGCAGAGCCCCACATCCTCCCGCACAT...CTTCCACACGCCTGGCAATTCTTCCCACACACAGAGGCAGTAATGAAACTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
3UTR CAA 72 bp CCAGCTCTGGCTCAATGGCCTCTTGTACAGCATGGTTaGGATTCTGTCTTCAGTCTAAGGACGGAGCTATGC +
Preference number: 4 (lower is better)
Translates to: PALAQWPLVQHG*DSVFSLRTELC
Trigger: GCATAGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCATTGAGCCAGAGCTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
3UTR CAA 72 bp CATATGCTCCCTACCTGGGCACTGGGACCAGCTGAGTaGACTCATTCCAGATTCAAGTACAACTGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: HMLPTWALGPAE*THSRFKYNCAS
Trigger: GCTTGCACAGTTGTACTTGAATCTGGAATGAGTCAACTCAGCTGGTCCCAGTGCCCAGGTAGGGAGCATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp CTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTATGCCAGCCGTCAGCTGGTAGGTaGTCACACTATTGGCATCAC +
Preference number: 4 (lower is better)
Translates to: LVQHGLDSVFSLRTELCQPSAGR*SHYWHH
Trigger: GTGATGCCAATAGTGTGATCACCTACCAGCTGACGG...CTGGCATAGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR TCA 90 bp CCATGTCTTGTAGGCTTTCATCTCACCAGTCAGTCACTAGCAGTCCTGTGCACTACTGTGGATACCATCTaGCACAGACACCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: PCLVGFHLTSQSLAVLCTTVDTI*HRHLHE
Trigger: CTCATGGAGGTGTCTGTGTCAGATGGTATCCACAGT...AGTGCACAGGACTGCTAGTGACTGACTGGTGAGATGAAAGCCTACAAGACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR GCA 90 bp CTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTATGCCAGGTGGGAAGCTCCTGGTaGTCACTTCACAGTAGGGAT +
Preference number: 4 (lower is better)
Translates to: LVQHGLDSVFSLRTELCQVGSSW*SLHSRD
Trigger: ATCCCTACTGTGAAGTGAGCACCAGGAGCTTCCCAC...CTGGCATAGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp ATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTACCCTCTGTCACAGATaGAGGAGTAGCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: MASCTAWFGFCLQSKDGATLCHR*RSSCPM
Trigger: CATGGGACAGCTACTCCTGCATCTGTGACAGAGGGT...AGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp ATAGATGCATCATCTCACCTGTGTTGCCATCCAGTGCTGAACAGTAATAAATACTTCTCCCCGCTGCAGTaGCGGACTGCGTTACCCACG +
Preference number: 4 (lower is better)
Translates to: IDASSHLCCHPVLNSNKYFSPLQ*RTALPT
Trigger: CGTGGGTAACGCAGTCCGGCACTGCAGCGGGGAGAA...GTATTTATTACTGTTCAGCACTGGATGGCAACACAGGTGAGATGATGCATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp AAGGACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTTGGCAGGAAACCTTTaGAGACAGGACAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: KDGAMPALMKSTSPSGDILAGNL*RQDKDD
Trigger: GTCATCTTTGTCCTGTCTGCAAAGGTTTCCTGCCAA...GATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTATGCCAGGCAAGCATCCTGGGCTaGGGGCTTGTAGTAATTCTC +
Preference number: 4 (lower is better)
Translates to: LVQHGLDSVFSLRTELCQASILG*GLVVIL
Trigger: GAGAATTACTACAAGCCCCCAGCCCAGGATGCTTGC...CTGGCATAGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp AAAAAGAATGTGGTAACCATTGAAAACGGGCACTCTGGCTTTGTTTCTTTGCACGCTAAGCACGGCCACTaGCTTGGCCAGGACCCCACT +
Preference number: 4 (lower is better)
Translates to: KKNVVTIENGHSGFVSLHAKHGH*LGQDPT
Trigger: AGTGGGGTCCTGGCCAAGCCAGTGGCCGTGCTTAGC...GTGCAAAGAAACAAAGCCAGAGTGCCCGTTTTCAATGGTTACCACATTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp ATAGATGCATCATCTCACCTGTGTTGCCATCCAGTGCTGAACAGTAATAAATACCCTTTCCGCTGCTCCTaGGGCTGGCTGCTAAGCACG +
Preference number: 4 (lower is better)
Translates to: IDASSHLCCHPVLNSNKYPFRCS*GWLLST
Trigger: CGTGCTTAGCAGCCAGCCCCAGGAGCAGCGGAAAGG...GTATTTATTACTGTTCAGCACTGGATGGCAACACAGGTGAGATGATGCATCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp AAAAAGAATGTGGTAACCATTGAAAACGGGCACTCTGGCTTTGTTTCTTTGCACCCTCCGTCTGCTGGATaGGGTTTCCCTCTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: KKNVVTIENGHSGFVSLHPPSAG*GFPLSP
Trigger: AGGGCTGAGAGGGAAACCTCATCCAGCAGACGGAGG...GTGCAAAGAAACAAAGCCAGAGTGCCCGTTTTCAATGGTTACCACATTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTATGCCAGGGCTGCTCACAAAGATaGGCGCATTGTCGTTCACAT +
Preference number: 4 (lower is better)
Translates to: LVQHGLDSVFSLRTELCQGCSQR*AHCRSH
Trigger: ATGTGAACGACAATGCGCCCATCTTTGTGAGCAGCC...CTGGCATAGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp ATAGATGCATCATCTCACCTGTGTTGCCATCCAGTGCTGAACAGTAATAAATACTCCCCCACCAGCCTTTaGGGCACGGAAGGTCGACTT +
Preference number: 4 (lower is better)
Translates to: IDASSHLCCHPVLNSNKYSPTSL*GTEGRL
Trigger: AAGTCGACCTTCCGTGCCCCAAAGGCTGGTGGGGGA...GTATTTATTACTGTTCAGCACTGGATGGCAACACAGGTGAGATGATGCATCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTATGCCAGACTGGCATTGGCCATTaGTCTTGTTGCAGTCGGGAT +
Preference number: 4 (lower is better)
Translates to: LVQHGLDSVFSLRTELCQTGIGH*SCCSRD
Trigger: ATCCCGACTGCAACAAGACCAATGGCCAATGCCAGT...CTGGCATAGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp ATAGATGCATCATCTCACCTGTGTTGCCATCCAGTGCTGAACAGTAATAAATACTACCCACGGATCCTTTaGGGCATGGCACCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: IDASSHLCCHPVLNSNKYYPRIL*GMAPLL
Trigger: CAGCAGCGGTGCCATGCCCCAAAGGATCCGTGGGTA...GTATTTATTACTGTTCAGCACTGGATGGCAACACAGGTGAGATGATGCATCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp TGGCTGCAGAGTCAAAGCAGTGTAAAGCATACACAGCTCCCATCTTCTCCCAAGGTCGAAGATGTCAACTaGAAGAATCATGTTGGCGGT +
Preference number: 4 (lower is better)
Translates to: WLQSQSSVKHTQLPSSPKVEDVN*KNHVGG
Trigger: ACCGCCAACATGATTCTTGCAGTTGACATCTTCGAC...CTTGGGAGAAGATGGGAGCTGTGTATGCTTTACACTGCTTTGACTCTGCAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp TGGCTGCAGAGTCAAAGCAGTGTAAAGCATACACAGCTCCCATCTTCTCCCAAGACGTCCGTGTCGTTCTaGATGTTGAAGACAAAGATG +
Preference number: 4 (lower is better)
Translates to: WLQSQSSVKHTQLPSSPKTSVSF*MLKTKM
Trigger: CATCTTTGTCTTCAACATCCAGAACGACACGGACGT...CTTGGGAGAAGATGGGAGCTGTGTATGCTTTACACTGCTTTGACTCTGCAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp AAAAAGAATGTGGTAACCATTGAAAACGGGCACTCTGGCTTTGTTTCTTTGCACTCTGGAGATGGAGCCTaGAAGACGTGCCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KKNVVTIENGHSGFVSLHSGDGA*KTCQLW
Trigger: CCACAGCTGGCACGTCTTCCAGGCTCCATCTCCAGA...GTGCAAAGAAACAAAGCCAGAGTGCCCGTTTTCAATGGTTACCACATTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp ATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTGATGAAGGATGCATCTaGTTCTCCATGGTTACCACG +
Preference number: 4 (lower is better)
Translates to: MASCTAWFGFCLQSKDGADEGCI*FSMVTT
Trigger: CGTGGTAACCATGGAGAACCAGATGCATCCTTCATC...AGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR TCA 90 bp AAAAAGAATGTGGTAACCATTGAAAACGGGCACTCTGGCTTTGTTTCTTTGCACTGCCCTGCAAGCAGCTaGAGGCAGCAAAGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: KKNVVTIENGHSGFVSLHCPASS*RQQRGS
Trigger: ACTACCTCTTTGCTGCCTTCAGCTGCTTGCAGGGCA...GTGCAAAGAAACAAAGCCAGAGTGCCCGTTTTCAATGGTTACCACATTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp AAAAAGAATGTGGTAACCATTGAAAACGGGCACTCTGGCTTTGTTTCTTTGCACCCCAAATTTCGTCTGTaGCCACCAGATGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KKNVVTIENGHSGFVSLHPKFRL*PPDASL
Trigger: GAGGCTGGCATCTGGTGGCCACAGACGAAATTTGGG...GTGCAAAGAAACAAAGCCAGAGTGCCCGTTTTCAATGGTTACCACATTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CCAAAAATCTTAATTTATTATAGATGCATCATCTCACCTGTGTTGCCATCCAGTGGCTTGCAGGCACACTaGCCAGTGTCCATGTCGCAG +
Preference number: 4 (lower is better)
Translates to: PKILIYYRCIISPVLPSSGLQAH*PVSMSQ
Trigger: CTGCGACATGGACACTGGGCAGTGTGCCTGCAAGCC...ACTGGATGGCAACACAGGTGAGATGATGCATCTATAATAAATTAAGATTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CCA 90 bp CCAAAAATCTTAATTTATTATAGATGCATCATCTCACCTGTGTTGCCATCCAGTTGGCAGAGGAGCTCATaGCTGGTGAGCCATGGTCCA +
Preference number: 4 (lower is better)
Translates to: PKILIYYRCIISPVLPSSWQRSS*LVSHGP
Trigger: TGGACCATGGCTCACCAGCCATGAGCTCCTCTGCCA...ACTGGATGGCAACACAGGTGAGATGATGCATCTATAATAAATTAAGATTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CCA 90 bp GTTGACTCATTCCAGATTCAAGTACAACTGTGCAAGCTTCCTTGGGCAATAGAGTTGTTGAAAAGGATCTaGAAGTCAGGCAACTCCGGT +
Preference number: 4 (lower is better)
Translates to: VDSFQIQVQLCKLPWAIELLKRI*KSGNSG
Trigger: ACCGGAGTTGCCTGACTTCCAGATCCTTTTCAACAA...CTCTATTGCCCAAGGAAGCTTGCACAGTTGTACTTGAATCTGGAATGAGTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR GCA 90 bp ATAGATGCATCATCTCACCTGTGTTGCCATCCAGTGCTGAACAGTAATAAATACATACACAGACAGGTTTaGTTCGTTCCTCCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: IDASSHLCCHPVLNSNKYIHRQV*FVPPSP
Trigger: TGGAGACGGAGGAACGAAGCAAACCTGTCTGTGTAT...GTATTTATTACTGTTCAGCACTGGATGGCAACACAGGTGAGATGATGCATCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CCAAAAATCTTAATTTATTATAGATGCATCATCTCACCTGTGTTGCCATCCAGTCCTAGGGATGAAGGATaGATCTGGTTCTCCATGGTT +
Preference number: 4 (lower is better)
Translates to: PKILIYYRCIISPVLPSSPRDEG*IWFSMV
Trigger: AACCATGGAGAACCAGATGCATCCTTCATCCCTAGG...ACTGGATGGCAACACAGGTGAGATGATGCATCTATAATAAATTAAGATTTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR GCA 90 bp CCAAAAATCTTAATTTATTATAGATGCATCATCTCACCTGTGTTGCCATCCAGTTTGGCAGGAAACCTTTaGAGACAGGACAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: PKILIYYRCIISPVLPSSLAGNL*RQDKDD
Trigger: GTCATCTTTGTCCTGTCTGCAAAGGTTTCCTGCCAA...ACTGGATGGCAACACAGGTGAGATGATGCATCTATAATAAATTAAGATTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 90 bp ACCAAGCTCGGGGCCGTCGGGGCGCCGCGGGCGACCAGCCGGACCTaGAGCGGCAGCAGCCTCCCGGCCAAGCGGGCACAGCCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: TKLGAVGAPRATSRT*SGSSLPAKRAQPRV
Trigger: GACTCTGGGCTGTGCCCGCTTGGCCGGGAGGCTGCTGCCGCTGCAGGTCCGGCTGGTCGCCCGCGGCGCCCCGACGGCCCCGAGCTTGGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 90 bp ACAGCCCAGAGTCCCCGCGCCAAGCCCAAGCCTCCGACCGGCTGCTaGCCCCTCGCGGCTCACGTCCAGCAGCTCCCGAGGCGTGCGCGT +
Preference number: 5 (lower is better)
Translates to: TAQSPRAKPKPPTGC*PLAAHVQQLPRRAR
Trigger: ACGCGCACGCCTCGGGAGCTGCTGGACGTGAGCCGCGAGGGGCCAGCAGCCGGTCGGAGGCTTGGGCTTGGCGCGGGGACTCTGGGCTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 90 bp AGCCGGTCCCGGCGACCGGCGGGCAGCTGCAGGCGGGGAAGTTGGTaGTGGCCTCAAGCACCGAAGTCAGCGAGGCTGCGCCGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: SRSRRPAGSCRRGSW*WPQAPKSARLRRRL
Trigger: CAGGCGGCGGCGCAGCCTCGCTGACTTCGGTGCTTGAGGCCATCACCAACTTCCCCGCCTGCAGCTGCCCGCCGGTCGCCGGGACCGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 90 bp GGCGCCTGCCGCGCGTCCCAGGGCGCACACCAGACGCAGCTCAGCTaGACCTCCTGGCCGCAGGCAAATGGGTCCGCGCCTGCAGCCGGT +
Preference number: 5 (lower is better)
Translates to: GACRASQGAHQTQLS*TSWPQANGSAPAAG
Trigger: ACCGGCTGCAGGCGCGGACCCATTTGCCTGCGGCCAGGAGGTTCAGCTGAGCTGCGTCTGGTGTGCGCCCTGGGACGCGCGGCAGGCGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 90 bp GCAGCTCAGCTGAACCTCCTGGCCGCAGGCAAATGGGTCCGCGCCTaGAGCCGGTCCCGGCGACCGGCGGGCAGCTGCAGGCGGGGAAGT +
Preference number: 5 (lower is better)
Translates to: AAQLNLLAAGKWVRA*SRSRRPAGSCRRGS
Trigger: ACTTCCCCGCCTGCAGCTGCCCGCCGGTCGCCGGGACCGGCTGCAGGCGCGGACCCATTTGCCTGCGGCCAGGAGGTTCAGCTGAGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 90 bp CGCACACCAGACGCAGCTCAGCTGAACCTCCTGGCCGCAGGCAAATaGGTCCGCGCCTGCAGCCGGTCCCGGCGACCGGCGGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RTPDAAQLNLLAAGK*VRACSRSRRPAGSC
Trigger: GCAGCTGCCCGCCGGTCGCCGGGACCGGCTGCAGGCGCGGACCCATTTGCCTGCGGCCAGGAGGTTCAGCTGAGCTGCGTCTGGTGTGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 90 bp CCGCAGTGCCCGCAGGCTCATTCTCAGGCACTGACACCTGGTAGCTaGGCAGCGGGAACTGCGGGCTCGTGCTGCTGCCCGTGCCCCGCC +
Preference number: 5 (lower is better)
Translates to: PQCPQAHSQALTPGS*AAGTAGSCCCPCPA
Trigger: GGCGGGGCACGGGCAGCAGCACGAGCCCGCAGTTCCCGCTGCCCAGCTACCAGGTGTCAGTGCCTGAGAATGAGCCTGCGGGCACTGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 90 bp GGCGGGGAAGTTGGTGATGGCCTCAAGCACCGAAGTCAGCGAGGCTaGGCCGCCGCCTGCGGCCGGGAAGCAGAGCGCATCTCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: GGEVGDGLKHRSQRG*AAACGREAERISKS
Trigger: GGACTTGGAGATGCGCTCTGCTTCCCGGCCGCAGGCGGCGGCGCAGCCTCGCTGACTTCGGTGCTTGAGGCCATCACCAACTTCCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 90 bp CTGCCCGTGCCCCGCCTAGACCGTCGCACCACCCCCGCCCGAGGTTaGGACAGGTTAAGCAACGATGGCGACACCGAGGGCGACTCTGAG +
Preference number: 5 (lower is better)
Translates to: LPVPRLDRRTTPARG*DRLSNDGDTEGDSE
Trigger: CTCAGAGTCGCCCTCGGTGTCGCCATCGTTGCTTAACCTGTCCCAACCTCGGGCGGGGGTGGTGCGACGGTCTAGGCGGGGCACGGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 90 bp GATGCCTTTCCGCTGCTCCTGGGGCTGGCTGCTAAGCACGGCCACTaGCTTGGCCAGGACCCCACTTTCCGGGTCAGAGGGCCGGTCGCC +
Preference number: 5 (lower is better)
Translates to: DAFPLLLGLAAKHGH*LGQDPTFRVRGPVA
Trigger: GGCGACCGGCCCTCTGACCCGGAAAGTGGGGTCCTGGCCAAGCCAGTGGCCGTGCTTAGCAGCCAGCCCCAGGAGCAGCGGAAAGGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS GCA 90 bp GAGCGCGTTAGCAGAGTGGCCCGAGTGGTGGCCGAGTCATCCAGCTaGAGCTTCTTCCCTGCCAGCACCGCCCTCAGGTGCTTCCGCACC +
Preference number: 5 (lower is better)
Translates to: ERVSRVARVVAESSS*SFFPASTALRCFRT
Trigger: GGTGCGGAAGCACCTGAGGGCGGTGCTGGCAGGGAAGAAGCTGCAGCTGGATGACTCGGCCACCACTCGGGCCACTCTGCTAACGCGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
CDS TCA 90 bp GGCGTCCTGCATCGCCTTCGTCTGGGTCGTGCGCGCGCAGTTCGATaGCCGCAGTGCCCGCAGGCTCATTCTCAGGCACTGACACCTGGT +
Preference number: 5 (lower is better)
Translates to: GVLHRLRLGRARAVR*PQCPQAHSQALTPG
Trigger: ACCAGGTGTCAGTGCCTGAGAATGAGCCTGCGGGCACTGCGGTCATCGAACTGCGCGCGCACGACCCAGACGAAGGCGATGCAGGACGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 90 bp TTGGCCAGGACCCCACTTTCCGGGTCAGAGGGCCGGTCGCCACAGTaGTTGCCCTGCGCCTGCCGGTGTAACTCCACGCTGACCTTGGTC +
Preference number: 5 (lower is better)
Translates to: LARTPLSGSEGRSPQ*LPCACRCNSTLTLV
Trigger: GACCAAGGTCAGCGTGGAGTTACACCGGCAGGCGCAGGGCAATCACTGTGGCGACCGGCCCTCTGACCCGGAAAGTGGGGTCCTGGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS CCA 90 bp CATAGTGGCCGGGTCCGCACTCGCAGGAGTAGCCTCGAGGAGTGTTaGGGGAGCGCACACAGGCTGCCACGTGCTTGCAGGGGTTCAGGA +
Preference number: 5 (lower is better)
Translates to: HSGRVRTRRSSLEEC*GSAHRLPRACRGSG
Trigger: TCCTGAACCCCTGCAAGCACGTGGCAGCCTGTGTGCGCTCCCCCAACACTCCTCGAGGCTACTCCTGCGAGTGCGGACCCGGCCACTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 90 bp CTCCTCACTGTCACTCCCAGCCAGGCTCTCGTCGGGCCAGCCAGCTaGGACGTGGTTGGCCAGAGCATCTTTTGGGGTGCTATGGGCGGG +
Preference number: 5 (lower is better)
Translates to: LLTVTPSQALVGPAS*DVVGQSIFWGAMGG
Trigger: CCCGCCCATAGCACCCCAAAAGATGCTCTGGCCAACCACGTCCCAGCTGGCTGGCCCGACGAGAGCCTGGCTGGGAGTGACAGTGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp GTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCGGGGAGGGCAGGGGCTaGAGGCACATGGGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: VPACPIGSSPRQASRSEGGEGRG*RHMGPP
Trigger: TGGAGGACCCATGTGCCTCAAGCCCCTGCCCTCCCC...GCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp CTCCAGGCTCCCATCCCTTGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTTTCCCCCACCAGCCTTaGGGGCACGGAAGGTCGACT +
Preference number: 5 (lower is better)
Translates to: LQAPIPWPWLHRGSQWAGFPHQP*GHGRST
Trigger: AGTCGACCTTCCGTGCCCCAAAGGCTGGTGGGGGAA...ACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCAAGGGATGGGAGCCTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 90 bp GCTGTCCCATGTGTCACGGCAGTGGCTATGGGGAGGGCAGGGGCTTaGGGCACATGGGTCCTCCACGTCACAGCCGTCCTTCACCCTGAC +
Preference number: 5 (lower is better)
Translates to: AVPCVTAVAMGRAGA*GTWVLHVTAVLHPD
Trigger: GTCAGGGTGAAGGACGGCTGTGACGTGGAGGACCCATGTGCCTCAAGCCCCTGCCCTCCCCATAGCCACTGCCGTGACACATGGGACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 90 bp GAGTCATCCAGCTGCAGCTTCTTCCCTGCCAGCACCGCCCTCAGGTaGTTCCGCACCTCCCTGTGGGCCACGCAGTGGAACAGGAGGACA +
Preference number: 5 (lower is better)
Translates to: ESSSCSFFPASTALR*FRTSLWATQWNRRT
Trigger: TGTCCTCCTGTTCCACTGCGTGGCCCACAGGGAGGTGCGGAAGCACCTGAGGGCGGTGCTGGCAGGGAAGAAGCTGCAGCTGGATGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
CDS CCA 90 bp CTCCTCACTGTCACTCCCAGCCAGGCTCTCGTCGGGCCAGCCAGCTaGGACGTGGTTGGCCAGAGCATCTGCTTTTGGGGTGCTATGGGC +
Preference number: 5 (lower is better)
Translates to: LLTVTPSQALVGPAS*DVVGQSICFWGAMG
Trigger: GCCCATAGCACCCCAAAAGCAGATGCTCTGGCCAACCACGTCCCAGCTGGCTGGCCCGACGAGAGCCTGGCTGGGAGTGACAGTGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000239489.2
CDS-3UTR CAA 90 bp GGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCAGTCTGTGGCTCACCACGGGGGTGTaGATGACAGGCCGGTTAGGC +
Preference number: 5 (lower is better)
Translates to: GSSPRQASRSEGLTGSLWLTTGV*MTGRLG
Trigger: GCCTAACCGGCCTGTCATCAACACCCCCGTGGTGAG...CCACAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp GGCCAGCGGAACACCCACACTCCCTGGCCGGAAGCAGCTGCAGAAGCTGTGTCACTCACCACGGGGGTGTaGATGACAGGCCGGTTAGGC +
Preference number: 5 (lower is better)
Translates to: GQRNTHTPWPEAAAEAVSLTTGV*MTGRLG
Trigger: GCCTAACCGGCCTGTCATCAACACCCCCGTGGTGAG...TGACACAGCTTCTGCAGCTGCTTCCGGCCAGGGAGTGTGGGTGTTCCGCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp ATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTAGCACGGCCACTGGCTaGGCCAGGACCCCACTTTCC +
Preference number: 5 (lower is better)
Translates to: ILAILGLPGPPVSLLAVRSTATG*ARTPLS
Trigger: GGAAAGTGGGGTCCTGGCCAAGCCAGTGGCCGTGCT...ACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 90 bp ACCAGCACCGAATGCCACCGCCCATCGCTCACACCTCCAGGAACCTaGGGTGTCACCGTGGTTGTGGTCTCACCTGCCGAGAACGTGAGC +
Preference number: 5 (lower is better)
Translates to: TSTECHRPSLTPPGT*GVTVVVVSPAENVS
Trigger: GCTCACGTTCTCGGCAGGTGAGACCACAACCACGGTGACACCGCAGGTTCCTGGAGGTGTGAGCGATGGGCGGTGGCATTCGGTGCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 90 bp GGGCCAGAAGCTGGTAGGCCGTGCGCACATCATTGCCAAAGAGGGTaGTGTTCCCCTGCGTGGCGTTCCTCAGAGCCTTTGCCAGCCGCA +
Preference number: 5 (lower is better)
Translates to: GPEAGRPCAHHCQRG*CSPAWRSSEPLPAA
Trigger: TGCGGCTGGCAAAGGCTCTGAGGAACGCCACGCAGGGGAACAGCACCCTCTTTGGCAATGATGTGCGCACGGCCTACCAGCTTCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 90 bp GGGCAACAGCAAACTGGCCAGGCTCATCGGGGTGTCTCCTCCGTCTaGTGGATGAGGTTTCCCTCTCAGCCCTGGGCTCTGGTTGTGCCG +
Preference number: 5 (lower is better)
Translates to: GQQQTGQAHRGVSSV*WMRFPSQPWALVVP
Trigger: CGGCACAACCAGAGCCCAGGGCTGAGAGGGAAACCTCATCCAGCAGACGGAGGAGACACCCCGATGAGCCTGGCCAGTTTGCTGTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 90 bp AGGGCGTTCCTGTCCTGGGTGGCAAACGCCAGGGAGACGGTGAAGTaGAAGCGTTGCCGCAGGCCTCGGAAGGTAACGAAGGACTGGGGT +
Preference number: 5 (lower is better)
Translates to: RAFLSWVANARETVK*KRCRRPRKVTKDWG
Trigger: ACCCCAGTCCTTCGTTACCTTCCGAGGCCTGCGGCAACGCTTCCACTTCACCGTCTCCCTGGCGTTTGCCACCCAGGACAGGAACGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 90 bp CCCGCTGCAGTGCCGGACTGCGTTACCCACGGATCCTTTGGGGCATaGCACCGCTGCTGGCTGCCCAAATTTCGTCTGTGGCCACCAGAT +
Preference number: 5 (lower is better)
Translates to: PAAVPDCVTHGSFGA*HRCWLPKFRLWPPD
Trigger: ATCTGGTGGCCACAGACGAAATTTGGGCAGCCAGCAGCGGTGCCATGCCCCAAAGGATCCGTGGGTAACGCAGTCCGGCACTGCAGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 90 bp AGCACCGCCCTCAGGTGCTTCCGCACCTCCCTGTGGGCCACGCAGTaGAACAGGAGGACAAAGATGCCCTGCAAGCAGCTGAAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: STALRCFRTSLWATQ*NRRTKMPCKQLKAA
Trigger: TGCTGCCTTCAGCTGCTTGCAGGGCATCTTTGTCCTCCTGTTCCACTGCGTGGCCCACAGGGAGGTGCGGAAGCACCTGAGGGCGGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
CDS TCA 90 bp GAGCGCCTCGGGGAGCCGTGGTCCACAGCACTAACTTTGAGTACATaGGTGTCCTTGGTCTCCCGGTCCAGGGAGCGGGCTGTGGTCACT +
Preference number: 5 (lower is better)
Translates to: ERLGEPWSTALTLST*VSLVSRSRERAVVT
Trigger: AGTGACCACAGCCCGCTCCCTGGACCGGGAGACCAAGGACACTCATGTACTCAAAGTTAGTGCTGTGGACCACGGCTCCCCGAGGCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 90 bp AGCAAACTGGCCAGGCTCATCGGGGTGTCTCCTCCGTCTGCTGGATaGGGTTTCCCTCTCAGCCCTGGGCTCTGGTTGTGCCGTGAGTGG +
Preference number: 5 (lower is better)
Translates to: SKLARLIGVSPPSAG*GFPLSPGLWLCREW
Trigger: CCACTCACGGCACAACCAGAGCCCAGGGCTGAGAGGGAAACCTCATCCAGCAGACGGAGGAGACACCCCGATGAGCCTGGCCAGTTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 90 bp CGGTGCGGAGCATGTCTGGCCCTTCGCTGTAGGTGTTGTTGCAGTTaGGGGAGCGCGTTAGCAGAGTGGCCCGAGTGGTGGCCGAGTCAT +
Preference number: 5 (lower is better)
Translates to: RCGACLALRCRCCCS*GSALAEWPEWWPSH
Trigger: ATGACTCGGCCACCACTCGGGCCACTCTGCTAACGCGCTCCCTCAACTGCAACAACACCTACAGCGAAGGGCCAGACATGCTCCGCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
CDS TCA 90 bp GGTCGCCACAGTGATTGCCCTGCGCCTGCCGGTGTAACTCCACGCTaGCCTTGGTCTCCACCTTCAGGTGGGGCTCAGTGTCCAACTCCT +
Preference number: 5 (lower is better)
Translates to: GRHSDCPAPAGVTPR*PWSPPSGGAQCPTP
Trigger: AGGAGTTGGACACTGAGCCCCACCTGAAGGTGGAGACCAAGGTCAGCGTGGAGTTACACCGGCAGGCGCAGGGCAATCACTGTGGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS GCA 90 bp ATGAGTGTCCTTGGTCTCCCGGTCCAGGGAGCGGGCTGTGGTCACTaGACCCGTGGCGGCATCGATGAGGAAGTAGCCATTAGAGCGCTC +
Preference number: 5 (lower is better)
Translates to: MSVLGLPVQGAGCGH*TRGGIDEEVAIRAL
Trigger: GAGCGCTCTAATGGCTACTTCCTCATCGATGCCGCCACGGGTGCAGTGACCACAGCCCGCTCCCTGGACCGGGAGACCAAGGACACTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 90 bp AGATCTGCTCCTGCAGGTCCTCTGACGGGAAGAACCGGCCACGGGTaGCACCGGGGAGCAGTGCCGAGAAAGTCACGTTCAGGATGTTGG +
Preference number: 5 (lower is better)
Translates to: RSAPAGPLTGRTGHG*HRGAVPRKSRSGCW
Trigger: CCAACATCCTGAACGTGACTTTCTCGGCACTGCTCCCCGGTGGCACCCGTGGCCGGTTCTTCCCGTCAGAGGACCTGCAGGAGCAGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 90 bp CACACCTCCAGGAACCTGCGGTGTCACCGTGGTTGTGGTCTCACCTaGCGAGAACGTGAGCTGCAGCTGCTCCTCCACAATCTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: HTSRNLRCHRGCGLT*RERELQLLLHNLQG
Trigger: GCCCTGGAGATTGTGGAGGAGCAGCTGCAGCTCACGTTCTCGGCAGGTGAGACCACAACCACGGTGACACCGCAGGTTCCTGGAGGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 90 bp GGCGGCTCTCATGCTGTAAGATGCGGGCCAGAAGCTGGTAGGCCGTaGGCACATCATTGCCAAAGAGGGTGCTGTTCCCCTGCGTGGCGT +
Preference number: 5 (lower is better)
Translates to: GGSHAVRCGPEAGRP*AHHCQRGCCSPAWR
Trigger: ACGCCACGCAGGGGAACAGCACCCTCTTTGGCAATGATGTGCGCACGGCCTACCAGCTTCTGGCCCGCATCTTACAGCATGAGAGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 90 bp GCCTGCCGGTGTAACTCCACGCTGACCTTGGTCTCCACCTTCAGGTaGGGCTCAGTGTCCAACTCCTCACTGTCACTCCCAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: ACRCNSTLTLVSTFR*GSVSNSSLSLPARL
Trigger: GAGCCTGGCTGGGAGTGACAGTGAGGAGTTGGACACTGAGCCCCACCTGAAGGTGGAGACCAAGGTCAGCGTGGAGTTACACCGGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR CAA 90 bp TTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTGACCAGAAGTTCACAGCCCTaGGCTGACCACCCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: LPSLGYLGLPSASWQCVTRSSQP*ADHPPV
Trigger: GACTGGAGGGTGGTCAGCCAAGGGCTGTGAACTTCT...GGTCACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 90 bp GCTGTAAGATGCGGGCCAGAAGCTGGTAGGCCGTGCGCACATCATTaGCAAAGAGGGTGCTGTTCCCCTGCGTGGCGTTCCTCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: AVRCGPEAGRPCAHH*QRGCCSPAWRSSEP
Trigger: AGGCTCTGAGGAACGCCACGCAGGGGAACAGCACCCTCTTTGGCAATGATGTGCGCACGGCCTACCAGCTTCTGGCCCGCATCTTACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp GGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTGGCAACTCCGGTGGGTaGTCATTCTGGTCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: GPSHKVPACPIGSSPRQAGNSGG*SFWSRR
Trigger: TCTCCTGGACCAGAATGACAACCCACCGGAGTTGCC...AGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CAA 90 bp TGTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGCAGGCTGCCACGTGCTaGCAGGGGTTCAGGAGACAC +
Preference number: 5 (lower is better)
Translates to: CHWSDFRGGAPCLPREPWQAATC*QGFRRH
Trigger: GTGTCTCCTGAACCCCTGCAAGCACGTGGCAGCCTG...CCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TTTGTCAGAGTCTGGGCCCTGAGCTCCTATGAGGGTCAAGGGCTTCCCGTCTGGTTCCCCCACCAGCCTTaGGGGCACGGAAGGTCGACT +
Preference number: 5 (lower is better)
Translates to: FVRVWALSSYEGQGLPVWFPHQP*GHGRST
Trigger: AGTCGACCTTCCGTGCCCCAAAGGCTGGTGGGGGAA...CCAGACGGGAAGCCCTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGACAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TGTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGAGCCCTGGGCTCTGGTaGTGCCGTGAGTGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: CHWSDFRGGAPCLPREPWSPGLW*CREWGS
Trigger: ACTACCCCACTCACGGCACAACCAGAGCCCAGGGCT...CCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp GGGCGTGGGGGTGGCAGGGTGGTCAGAGTTTCATATCATAGCTATGGCGCCCACTGGATGCTGTGCAGGTaGGAGCGCAGTGTCCGAACG +
Preference number: 5 (lower is better)
Translates to: GRGGGRVVRVSYHSYGAHWMLCR*ERSVRT
Trigger: CGTTCGGACACTGCGCTCCAACCTGCACAGCATCCA...GTGGGCGCCATAGCTATGATATGAAACTCTGACCACCCTGCCACCCCCACGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTATGAGGGTCAAGGGAGCACGGCCACTGGCTaGGCCAGGACCCCACTTTCC +
Preference number: 5 (lower is better)
Translates to: WLWHFVRVWALSSYEGQGSTATG*ARTPLS
Trigger: GGAAAGTGGGGTCCTGGCCAAGCCAGTGGCCGTGCT...CCCTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR CAA 90 bp TCACCTTCTGAGGTGGCGTGGGTTGCGGAGTTGTCACGGTGCTGTACCTCCTGGTTCATGGCCACCCCATaGAGATGCTCACGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: SPSEVAWVAELSRCCTSWFMATP*RCSRPG
Trigger: GCCAGGCCGTGAGCATCTCAATGGGGTGGCCATGAA...CCAGGAGGTACAGCACCGTGACAACTCCGCAACCCACGCCACCTCAGAAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp CGTAGAGCCAGCTGCTATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCATTCATGGCCACCCCATaGAGATGCTCACGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: RRASCYGRDPHTRCLLVPFMATP*RCSRPG
Trigger: GCCAGGCCGTGAGCATCTCAATGGGGTGGCCATGAA...TGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGGCTCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS TCA 90 bp CCAGCAGCAGCAGGCTCAGCTCGTTGCCTTGCAGAAAGGTGTAATTaGGGCTGTCAGATAGGTCAGGGTCGTGGGCTGGGATGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: PAAAGSARCLAERCN*GCQIGQGRGLGCGR
Trigger: TCGGCCGCATCCCAGCCCACGACCCTGACCTATCTGACAGCCTCAATTACACCTTTCTGCAAGGCAACGAGCTGAGCCTGCTGCTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 90 bp GTAGCTGGGGCCAGGAGGGCGCTGCCTGTATGGACGACATCCTCATaGAAATTAGCCTCTCGGGTGGCTGCTAGGTCAAAGCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: VAGARRALPVWTTSS*KLASRVAARSKPCW
Trigger: CCAGCAGGGCTTTGACCTAGCAGCCACCCGAGAGGCTAATTTTCATGAGGATGTCGTCCATACAGGCAGCGCCCTCCTGGCCCCAGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 90 bp CGGGGTCATAGTGTTCAGGCAGCAGCTGACCCAGGGTCCGGTAAATaGCAACCAGGGCAACAGCAAACTGGCCAGGCTCATCGGGGTGTC +
Preference number: 5 (lower is better)
Translates to: RGHSVQAAADPGSGK*QPGQQQTGQAHRGV
Trigger: GACACCCCGATGAGCCTGGCCAGTTTGCTGTTGCCCTGGTTGTCATTTACCGGACCCTGGGTCAGCTGCTGCCTGAACACTATGACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp AACATTGGCAGGAAGGACCGTGACAGCGTGGAAGACCTCTGGGCTCCCTCAGAACACCCCCGCCCGAGGTaGGGACAGGTTAAGCAACGA +
Preference number: 5 (lower is better)
Translates to: NIGRKDRDSVEDLWAPSEHPRPR*GQVKQR
Trigger: TCGTTGCTTAACCTGTCCCAACCTCGGGCGGGGGTG...TTCTGAGGGAGCCCAGAGGTCTTCCACGCTGTCACGGTCCTTCCTGCCAATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CAA 90 bp AGGCACACATACGCAGCACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCGTCACGTTCAGGATGTaGGAGCTGACGTCCGTGTCG +
Preference number: 5 (lower is better)
Translates to: RHTYAAHVPCAPKASGTPVTFRM*ELTSVS
Trigger: CGACACGGACGTCAGCTCCAACATCCTGAACGTGAC...GGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTGCTGCGTATGTGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CAA 90 bp AAGGACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCGGGGAGGGCAGGGGCTaGAGGCACATGGGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: KDGAMPALMKSTSPSGDIGEGRG*RHMGPP
Trigger: TGGAGGACCCATGTGCCTCAAGCCCCTGCCCTCCCC...GATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp AACATTGGCAGGAAGGACCGTGACAGCGTGGAAGACCTCTGGGCTCCCTCAGAACAGGCTGCCACGTGCTaGCAGGGGTTCAGGAGACAC +
Preference number: 5 (lower is better)
Translates to: NIGRKDRDSVEDLWAPSEQAATC*QGFRRH
Trigger: GTGTCTCCTGAACCCCTGCAAGCACGTGGCAGCCTG...TTCTGAGGGAGCCCAGAGGTCTTCCACGCTGTCACGGTCCTTCCTGCCAATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGGCAGTGCGTGACCCTCCTTGCACTGGCATaGGCCATTGGTCTTGTTGCA +
Preference number: 5 (lower is better)
Translates to: LPSLGYLGLPSASWQCVTLLALA*AIGLVA
Trigger: TGCAACAAGACCAATGGCCAATGCCAGTGCAAGGAG...GGTCACGCACTGCCAAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp GTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGAGCCAGAGGTGCAGTaGAAGAGCTCTGGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: VTLYPCHPWATWASRQPLEPEVQ*KSSGGS
Trigger: GCTTCCCCCAGAGCTCTTCAACTGCACCTCTGGCTC...AAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp AGGCACACATACGCAGCACATGTGCCGTGTGCTCCAAAGGCCAGCGGAACACCCGCCGTGCGCACATCATaGCCAAAGAGGGTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: RHTYAAHVPCAPKASGTPAVRTS*PKRVLF
Trigger: GAACAGCACCCTCTTTGGCAATGATGTGCGCACGGC...GGGTGTTCCGCTGGCCTTTGGAGCACACGGCACATGTGCTGCGTATGTGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TGGCCTTGGCTGCACCGTGGCTCTCAGTGGGCTGGTCACAGCAGTCCTTGGTGTGCCGTGATGAGGTTCTaGTGGATGCTGTGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: WPWLHRGSQWAGHSSPWCAVMRF*WMLCRL
Trigger: CAACCTGCACAGCATCCACAAGAACCTCATCACGGC...ACACCAAGGACTGCTGTGACCAGCCCACTGAGAGCCACGGTGCAGCCAAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp GGACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGAGCACGGCCACTGGCTaGGCCAGGACCCCACTTTCC +
Preference number: 5 (lower is better)
Translates to: GRSYASLNEVHVSLWRHLSTATG*ARTPLS
Trigger: GGAAAGTGGGGTCCTGGCCAAGCCAGTGGCCGTGCT...CAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR CAA 90 bp CAGAGACTCCCAGTCACCTGTGAGGGGACGCCTGGGGCTCTAGGGACCCTGGGTTCCCTCCTCGGAGTCTaGATGGTAATGACACAGTCA +
Preference number: 5 (lower is better)
Translates to: QRLPVTCEGTPGALGTLGSLLGV*MVMTQS
Trigger: TGACTGTGTCATTACCATCAAGACTCCGAGGAGGGA...ACCCAGGGTCCCTAGAGCCCCAGGCGTCCCCTCACAGGTGACTGGGAGTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
CDS GCA 90 bp GCAGAGGACCGGTCAGATCCAGTGACTTCTTGGAGCCGCTCTGAGTaGCCTGGGCAGCGCAGCTGTAGTTCCCCACGTAACTTCCAAAGT +
Preference number: 5 (lower is better)
Translates to: AEDRSDPVTSWSRSE*PGQRSCSSPRNFQS
Trigger: ACTTTGGAAGTTACGTGGGGAACTACAGCTGCGCTGCCCAGGGCACTCAGAGCGGCTCCAAGAAGTCACTGGATCTGACCGGTCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 90 bp TGGCTGCTAGGTCAAAGCCCTGCTGGCGGCTCTCATGCTGTAAGATaGGGGCCAGAAGCTGGTAGGCCGTGCGCACATCATTGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: WLLGQSPAGGSHAVR*GPEAGRPCAHHCQR
Trigger: TCTTTGGCAATGATGTGCGCACGGCCTACCAGCTTCTGGCCCGCATCTTACAGCATGAGAGCCGCCAGCAGGGCTTTGACCTAGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 90 bp GCTCCTGGTGCTCACTTCACAGTAGGGATGCTCATACTCGCCGGGTaGGCACACACAGTGGAAGCCTCCAATGAGCAGGTTCACGCAGGT +
Preference number: 5 (lower is better)
Translates to: APGAHFTVGMLILAG*AHTVEASNEQVHAG
Trigger: ACCTGCGTGAACCTGCTCATTGGAGGCTTCCACTGTGTGTGCCCACCCGGCGAGTATGAGCATCCCTACTGTGAAGTGAGCACCAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 90 bp GTGGAAGCGTTGCCGCAGGCCTCGGAAGGTAACGAAGGACTGGGGTaGGAAGCTCCTGGTGCTCACTTCACAGTAGGGATGCTCATACTC +
Preference number: 5 (lower is better)
Translates to: VEALPQASEGNEGLG*EAPGAHFTVGMLIL
Trigger: GAGTATGAGCATCCCTACTGTGAAGTGAGCACCAGGAGCTTCCCACCCCAGTCCTTCGTTACCTTCCGAGGCCTGCGGCAACGCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 90 bp AGCCAGCTTCTCTCGCAGCCGGGACTTCAGTGGCTGCTCTGGCAATaGCGGCGGGTAGGTGACTTTGTTTTTCAGGATGCCTTTCCGCTG +
Preference number: 5 (lower is better)
Translates to: SQLLSQPGLQWLLWQ*RRVGDFVFQDAFPL
Trigger: CAGCGGAAAGGCATCCTGAAAAACAAAGTCACCTACCCGCCGCCATTGCCAGAGCAGCCACTGAAGTCCCGGCTGCGAGAGAAGCTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS CCA 90 bp GGCTCCCTCCTCGGAGTCTTGATGGTAATGACACAGTCAGTGGCATaGACACCATCGCCAGAGCCAAGGGAGGATGTGCGGGAGGATGTG +
Preference number: 5 (lower is better)
Translates to: GSLLGVLMVMTQSVA*TPSPEPREDVREDV
Trigger: CACATCCTCCCGCACATCCTCCCTTGGCTCTGGCGATGGTGTCCATGCCACTGACTGTGTCATTACCATCAAGACTCCGAGGAGGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS-3UTR CAA 90 bp GGGCGTGGGGGTGGCAGGGTGGTCAGAGTTTCATATCATAGCTATGGCGCCCACTCGAAGTCCAGCGGGTaGATAACATCCAGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: GRGGGRVVRVSYHSYGAHSKSSG*ITSRLP
Trigger: TGGGAGCCTGGATGTTATCAACCCGCTGGACTTCGA...GTGGGCGCCATAGCTATGATATGAAACTCTGACCACCCTGCCACCCCCACGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CAA 90 bp GGCGTGGGGGTGGCAGGGTGGTCAGAGTTTCATATCATAGCTATGGCGCCCACTCAGGTGCCCCCGTTTTaGCATACTCCACTGGCACAG +
Preference number: 5 (lower is better)
Translates to: GVGVAGWSEFHIIAMAPTQVPPF*HTPLAQ
Trigger: CTGTGCCAGTGGAGTATGCAAAAACGGGGGCACCTG...AGTGGGCGCCATAGCTATGATATGAAACTCTGACCACCCTGCCACCCCCACGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTATGAGGGTCAAGGGGAGCCAGAGGTGCAGTaGAAGAGCTCTGGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: WLWHFVRVWALSSYEGQGEPEVQ*KSSGGS
Trigger: GCTTCCCCCAGAGCTCTTCAACTGCACCTCTGGCTC...CCCTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TCCCCTGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCGCCGTGCGCACATCATaGCCAAAGAGGGTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: SPVLGHSVSLPSLGYLGLAVRTS*PKRVLF
Trigger: GAACAGCACCCTCTTTGGCAATGATGTGCGCACGGC...GAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp GGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCAGTCTGTGGACTGCAAGAATCATGTaGGCGGTGACGATGACGAAG +
Preference number: 5 (lower is better)
Translates to: GSSPRQASRSEGLTGSLWTARIM*AVTMTK
Trigger: CTTCGTCATCGTCACCGCCAACATGATTCTTGCAGT...CCACAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp AACATTGGCAGGAAGGACCGTGACAGCGTGGAAGACCTCTGGGCTCCCTCAGAATGGATGCTGTGCAGGTaGGAGCGCAGTGTCCGAACG +
Preference number: 5 (lower is better)
Translates to: NIGRKDRDSVEDLWAPSEWMLCR*ERSVRT
Trigger: CGTTCGGACACTGCGCTCCAACCTGCACAGCATCCA...TTCTGAGGGAGCCCAGAGGTCTTCCACGCTGTCACGGTCCTTCCTGCCAATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TGTGCTAGGTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAACTCCACGCTGACCTaGGTCTCCACCTTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: CARSLCILAILGLPGPPVNSTLT*VSTFRW
Trigger: CCACCTGAAGGTGGAGACCAAGGTCAGCGTGGAGTT...GACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGACCTAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 90 bp TGTCATTCTCGTCTTCTACCACTATGTGGACGGTGGCTGAGGCACTaGGTGGGCCTGGATTGCGACCCTGGTCATTGGCCTCCACCAGCA +
Preference number: 5 (lower is better)
Translates to: CHSRLLPLCGRWLRH*VGLDCDPGHWPPPA
Trigger: TGCTGGTGGAGGCCAATGACCAGGGTCGCAATCCAGGCCCACTCAGTGCCTCAGCCACCGTCCACATAGTGGTAGAAGACGAGAATGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 90 bp ACGCAGCCATGTCCACAATCCGGCCATCGATGGACAGGTTTCGCATaGATCCCACAAACTGACGGCTGTGCACGGGGAAGTCTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: TQPCPQSGHRWTGFA*IPQTDGCARGSLLA
Trigger: TGCCAGAAGACTTCCCCGTGCACAGCCGTCAGTTTGTGGGATGCATGCGAAACCTGTCCATCGATGGCCGGATTGTGGACATGGCTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 90 bp GGAGCGGGCACTCACATAAGTACGTGTTCCACCTGTTCACACAGGTaGCCCCGTTCTGGCATGAGGTCCCATCGCAGAAGTTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: GAGTHISTCSTCSHR*PRSGMRSHRRSSSE
Trigger: CTCAGAGGAACTTCTGCGATGGGACCTCATGCCAGAACGGGGGCACCTGTGTGAACAGGTGGAACACGTACTTATGTGAGTGCCCGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 90 bp AGAACCGCATGGGCCCAGTGTCGATGTTGCGCACTTCTGTCAGCATaGGGTAGACATGCAAGTTCTCCACAAGGGTCCAGGCGAAGGTGC +
Preference number: 5 (lower is better)
Translates to: RTAWAQCRCCALLSA*GRHASSPQGSRRRC
Trigger: GCACCTTCGCCTGGACCCTTGTGGAGAACTTGCATGTCTACCGCATGCTGACAGAAGTGCGCAACATCGACACTGGGCCCATGCGGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 90 bp CCCAGCCCACCACGTGGTAGAACCGCATGGGCCCAGTGTCGATGTTaGGCACTTCTGTCAGCATGCGGTAGACATGCAAGTTCTCCACAA +
Preference number: 5 (lower is better)
Translates to: PSPPRGRTAWAQCRC*ALLSACGRHASSPQ
Trigger: TTGTGGAGAACTTGCATGTCTACCGCATGCTGACAGAAGTGCGCAACATCGACACTGGGCCCATGCGGTTCTACCACGTGGTGGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 90 bp TCCTTTGGGGCATGGCACCGCTGCTGGCTGCCCAAATTTCGTCTGTaGCCACCAGATGCCAGCCTCAAATGCTCTGGGACACCCATTGTA +
Preference number: 5 (lower is better)
Translates to: SFGAWHRCWLPKFRL*PPDASLKCSGTPIV
Trigger: TACAATGGGTGTCCCAGAGCATTTGAGGCTGGCATCTGGTGGCCACAGACGAAATTTGGGCAGCCAGCAGCGGTGCCATGCCCCAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 90 bp GCTCTGCTCACAATCAGCCAGCTTCTCTCGCAGCCGGGACTTCAGTaGCTGCTCTGGCAATGGCGGCGGGTAGGTGACTTTGTTTTTCAG +
Preference number: 5 (lower is better)
Translates to: ALLTISQLLSQPGLQ*LLWQWRRVGDFVFQ
Trigger: CTGAAAAACAAAGTCACCTACCCGCCGCCATTGCCAGAGCAGCCACTGAAGTCCCGGCTGCGAGAGAAGCTGGCTGATTGTGAGCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS CCA 90 bp CCCTGTGCGTACATTCATGGCCACCCCATTGAGATGCTCACGGCCTaGCTCCCTCCTCGGAGTCTTGATGGTAATGACACAGTCAGTGGC +
Preference number: 5 (lower is better)
Translates to: PCAYIHGHPIEMLTA*LPPRSLDGNDTVSG
Trigger: GCCACTGACTGTGTCATTACCATCAAGACTCCGAGGAGGGAGCCAGGCCGTGAGCATCTCAATGGGGTGGCCATGAATGTACGCACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS-3UTR CAA 90 bp CGTAGAGCCAGCTGCTATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCAATCCAACCGGAGCTGTaGTGGATTTGGAAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: RRASCYGRDPHTRCLLVPIQPEL*WIWKGK
Trigger: CTTCCCCTTCCAAATCCACAACAGCTCCGGTTGGAT...TGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGGCTCTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CAA 90 bp TGTCATTGGTCAGATTTCAGGGGTGGAGCACCCTGCCTGCCTAGAGAGCCCTGGGCGAGAGCCCAAAGGTaGTACACGGCCACATTCTCT +
Preference number: 5 (lower is better)
Translates to: CHWSDFRGGAPCLPREPWARAQR*YTATFS
Trigger: AGAGAATGTGGCCGTGTACAACCTTTGGGCTCTCGC...CCAGGGCTCTCTAGGCAGGCAGGGTGCTCCACCCCTGAAATCTGACCAATGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CAA 90 bp GGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTAGGGTGTGGCATAGCTaGTTCACAGTTCTTTCCACC +
Preference number: 5 (lower is better)
Translates to: GPSHKVPACPIGSSPRQARVWHS*FTVLST
Trigger: GGTGGAAAGAACTGTGAACAAGCTATGCCACACCCT...AGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp GGGCGTGGGGGTGGCAGGGTGGTCAGAGTTTCATATCATAGCTATGGCGCCCACTCCTTCACCCTGACCTaGAGGGCGTCATTCATGTTC +
Preference number: 5 (lower is better)
Translates to: GRGGGRVVRVSYHSYGAHSFTLT*RASFMF
Trigger: GAACATGAATGACGCCCTCAAGGTCAGGGTGAAGGA...GTGGGCGCCATAGCTATGATATGAAACTCTGACCACCCTGCCACCCCCACGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCCCCGTGAAGTTCAGCTaGTCGAAGATGTCAACTGCA +
Preference number: 5 (lower is better)
Translates to: CPIGSSPRQASRSEGLTGPVKFS*SKMSTA
Trigger: TGCAGTTGACATCTTCGACAAGCTGAACTTCACGGG...GCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp GTCACTCTGTATCCTTGCCATCCTTGGGCTACCTGGGCCTCCCGTCAGCCTCTTGCCGTGATGAGGTTCTaGTGGATGCTGTGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: VTLYPCHPWATWASRQPLAVMRF*WMLCRL
Trigger: CAACCTGCACAGCATCCACAAGAACCTCATCACGGC...AAGAGGCTGACGGGAGGCCCAGGTAGCCCAAGGATGGCAAGGATACAGAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTATGAGGGTCAAGGGCCAGCTGGGACGTGGTaGGCCAGAGCATCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: WLWHFVRVWALSSYEGQGPAGTW*ARASAF
Trigger: AAAAGCAGATGCTCTGGCCAACCACGTCCCAGCTGG...CCCTTGACCCTCATAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000239489.2
CDS-3UTR CAA 90 bp GACCGGCAGTCTGTGGGGTTGACTGTGCCTCATGGTTTCCTGATGGTTCAAATTAGCACGGCCACTGGCTaGGCCAGGACCCCACTTTCC +
Preference number: 5 (lower is better)
Translates to: DRQSVGLTVPHGFLMVQISTATG*ARTPLS
Trigger: GGAAAGTGGGGTCCTGGCCAAGCCAGTGGCCGTGCT...AATTTGAACCATCAGGAAACCATGAGGCACAGTCAACCCCACAGACTGCCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
CDS GCA 90 bp ACCCCTTCTACAAAGAGGGACAGCAGCGGGGACAGGAACTTCTCCTaGGACATGTTCTCCAGGCGGACAGTGATGCTGTTGGTCAGCATG +
Preference number: 5 (lower is better)
Translates to: TPSTKRDSSGDRNFS*DMFSRRTVMLLVSM
Trigger: CATGCTGACCAACAGCATCACTGTCCGCCTGGAGAACATGTCGCAGGAGAAGTTCCTGTCCCCGCTGCTGTCCCTCTTTGTAGAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 90 bp GTCACTCCACAACACGACGCTCTCACCAGTGAAGCGCTGAGGGTGTaGCATAGCTTGTTCACAGTTCTTTCCACCAAAGCGGAGCGGGCA +
Preference number: 5 (lower is better)
Translates to: VTPQHDALTSEALRV*HSLFTVLSTKAERA
Trigger: TGCCCGCTCCGCTTTGGTGGAAAGAACTGTGAACAAGCTATGCCACACCCTCAGCGCTTCACTGGTGAGAGCGTCGTGTTGTGGAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp AACATTGGCAGGAAGGACCGTGACAGCGTGGAAGACCTCTGGGCTCCCTCAGAACCTGCCCTGGTACCATaGTTGGCAATAAACGCAGCC +
Preference number: 5 (lower is better)
Translates to: NIGRKDRDSVEDLWAPSEPALVP*LAINAA
Trigger: GGCTGCGTTTATTGCCAACAATGGTACCAGGGCAGG...TTCTGAGGGAGCCCAGAGGTCTTCCACGCTGTCACGGTCCTTCCTGCCAATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TCACACAAGGTGCCTGCTTGTCCCATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTGGCCATTGGTCTTGTaGCAGTCGGGATCAAAGCCT +
Preference number: 5 (lower is better)
Translates to: SHKVPACPIGSSPRQASRWPLVL*QSGSKP
Trigger: AGGCTTTGATCCCGACTGCAACAAGACCAATGGCCA...CCTTGAAGCCTGCCTGGGACTGCTGCCTATGGGACAAGCAGGCACCTTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp ATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCAGTCTGCCCGTGAAGTTCAGCTaGTCGAAGATGTCAACTGCA +
Preference number: 5 (lower is better)
Translates to: IGSSPRQASRSEGLTGSLPVKFS*SKMSTA
Trigger: TGCAGTTGACATCTTCGACAAGCTGAACTTCACGGG...CAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TCCTTGGGCAATAGAGTGAGATGCCATTTCATGGCTCTCCAGTGGCTGCAGAGTAGCCCTGGGCTCTGGTaGTGCCGTGAGTGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: SLGNRVRCHFMALQWLQSSPGLW*CREWGS
Trigger: ACTACCCCACTCACGGCACAACCAGAGCCCAGGGCT...ACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCTCACTCTATTGCCCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp CTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCTCCTAAACTCCACGCTGACCTaGGTCTCCACCTTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LETSVALALCQSLGPELLNSTLT*VSTFRW
Trigger: CCACCTGAAGGTGGAGACCAAGGTCAGCGTGGAGTT...TAGGAGCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR CAA 90 bp ATAGGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCAGTCTGTCCCTCCTCGGAGTCTaGATGGTAATGACACAGTCA +
Preference number: 5 (lower is better)
Translates to: IGSSPRQASRSEGLTGSLSLLGV*MVMTQS
Trigger: TGACTGTGTCATTACCATCAAGACTCCGAGGAGGGA...CAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS TCA 90 bp CGAAGGGCCTCAGATAGGTCCTCTTCACATTTCGTGCCACGTTGCTaGAGTATGCCTCGAAATGCCTCAGTAGCTGCGCTGCACCAGCCT +
Preference number: 5 (lower is better)
Translates to: RRASDRSSSHFVPRC*SMPRNASVAALHQP
Trigger: AGGCTGGTGCAGCGCAGCTACTGAGGCATTTCGAGGCATACTTCAGCAACGTGGCACGAAATGTGAAGAGGACCTATCTGAGGCCCTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 90 bp TTTGTCTTCAGCCTCTCCGCCATCATCCTCGCTGTCCGATGTGTGTaGAGAGGCGTAGGAACTACTGTGCTCGTCCAGGGACAGCTCACT +
Preference number: 5 (lower is better)
Translates to: FVFSLSAIILAVRCV*RGVGTTVLVQGQLT
Trigger: AGTGAGCTGTCCCTGGACGAGCACAGTAGTTCCTACGCCTCTTCACACACATCGGACAGCGAGGATGATGGCGGAGAGGCTGAAGACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
CDS GCA 90 bp AGGCAGCCTGGTCCTCATAGTCCAGTTCCGTCATGGTATAGATGGTaGCAGTGTCCGGGTCAATGCGGAACTGTGGTACGGGATCCTCTA +
Preference number: 5 (lower is better)
Translates to: RQPGPHSPVPSWYRW*QCPGQCGTVVRDPL
Trigger: TAGAGGATCCCGTACCACAGTTCCGCATTGACCCGGACACTGGCACCATCTATACCATGACGGAACTGGACTATGAGGACCAGGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 90 bp TGGCTGCCCAAATTTCGTCTGTGGCCACCAGATGCCAGCCTCAAATaGTCTGGGACACCCATTGTAGATCACTTCACAGCCGAGCGAGGT +
Preference number: 5 (lower is better)
Translates to: WLPKFRLWPPDASLK*SGTPIVDHFTAERG
Trigger: ACCTCGCTCGGCTGTGAAGTGATCTACAATGGGTGTCCCAGAGCATTTGAGGCTGGCATCTGGTGGCCACAGACGAAATTTGGGCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 90 bp ATGGCACCGCTGCTGGCTGCCCAAATTTCGTCTGTGGCCACCAGATaGCAGCCTCAAATGCTCTGGGACACCCATTGTAGATCACTTCAC +
Preference number: 5 (lower is better)
Translates to: MAPLLAAQISSVATR*QPQMLWDTHCRSLH
Trigger: GTGAAGTGATCTACAATGGGTGTCCCAGAGCATTTGAGGCTGGCATCTGGTGGCCACAGACGAAATTTGGGCAGCCAGCAGCGGTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 90 bp ACAATCAGCCAGCTTCTCTCGCAGCCGGGACTTCAGTGGCTGCTCTaGCAATGGCGGCGGGTAGGTGACTTTGTTTTTCAGGATGCCTTT +
Preference number: 5 (lower is better)
Translates to: TISQLLSQPGLQWLL*QWRRVGDFVFQDAF
Trigger: AAAGGCATCCTGAAAAACAAAGTCACCTACCCGCCGCCATTGCCAGAGCAGCCACTGAAGTCCCGGCTGCGAGAGAAGCTGGCTGATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS-3UTR CAA 90 bp GACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTCAGGTGCCCCCGTTTTaGCATACTCCACTGGCACAG +
Preference number: 5 (lower is better)
Translates to: DGAMPALMKSTSPSGDICQVPPF*HTPLAQ
Trigger: CTGTGCCAGTGGAGTATGCAAAAACGGGGGCACCTG...ACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp CAGCTTGGTGAGAAGTCCTGGCCTTTGACCGCCTCGCTGAGGTTCTCCATTCCGCATTGGCCATTGGTCTaGTTGCAGTCGGGATCAAAG +
Preference number: 5 (lower is better)
Translates to: QLGEKSWPLTASLRFSIPHWPLV*LQSGSK
Trigger: CTTTGATCCCGACTGCAACAAGACCAATGGCCAATG...CGGAATGGAGAACCTCAGCGAGGCGGTCAAAGGCCAGGACTTCTCACCAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp GGCAGCAGTCCCAGGCAGGCTTCAAGGTCTGAGGGCTTGACCGGCAGTCTGTGGATAATGGTGCTTTCTTaGGCAGGAAACCTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: GSSPRQASRSEGLTGSLWIMVLS*AGNLCR
Trigger: TCTGCAAAGGTTTCCTGCCAAAGAAAGCACCATTAT...CCACAGACTGCCGGTCAAGCCCTCAGACCTTGAAGCCTGCCTGGGACTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp GACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTCCAGCTGGGACGTGGTaGGCCAGAGCATCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: DGAMPALMKSTSPSGDICPAGTW*ARASAF
Trigger: AAAAGCAGATGCTCTGGCCAACCACGTCCCAGCTGG...ACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000239489.2
CDS-3UTR CAA 90 bp GGCGTGGGGGTGGCAGGGTGGTCAGAGTTTCATATCATAGCTATGGCGCCCACTTCCCTCCTCGGAGTCTaGATGGTAATGACACAGTCA +
Preference number: 5 (lower is better)
Translates to: GVGVAGWSEFHIIAMAPTSLLGV*MVMTQS
Trigger: TGACTGTGTCATTACCATCAAGACTCCGAGGAGGGA...AGTGGGCGCCATAGCTATGATATGAAACTCTGACCACCCTGCCACCCCCACGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 90 bp AGCTGGGAGAAGAACAGAGCCGTGATGAGGTTCTTGTGGATGCTGTaGAGGTTGGAGCGCAGTGTCCGAACGAGTGAGAGAAGGACAAAG +
Preference number: 5 (lower is better)
Translates to: SWEKNRAVMRFLWML*RLERSVRTSERRTK
Trigger: CTTTGTCCTTCTCTCACTCGTTCGGACACTGCGCTCCAACCTGCACAGCATCCACAAGAACCTCATCACGGCTCTGTTCTTCTCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TCCCTCTGGAGACATCTGTGGCTTTGGCACTTTGTCAGAGTCTGGGCCCTGAGCCATTGGCCATTGGTCTaGTTGCAGTCGGGATCAAAG +
Preference number: 5 (lower is better)
Translates to: SLWRHLWLWHFVRVWALSHWPLV*LQSGSK
Trigger: CTTTGATCCCGACTGCAACAAGACCAATGGCCAATG...GCTCAGGGCCCAGACTCTGACAAAGTGCCAAAGCCACAGATGTCTCCAGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 90 bp ATGTCAAGGTCACTCCACAACACGACGCTCTCACCAGTGAAGCGCTaGGGGTGTGGCATAGCTTGTTCACAGTTCTTTCCACCAAAGCGG +
Preference number: 5 (lower is better)
Translates to: MSRSLHNTTLSPVKR*GCGIACSQFFPPKR
Trigger: CCGCTTTGGTGGAAAGAACTGTGAACAAGCTATGCCACACCCTCAGCGCTTCACTGGTGAGAGCGTCGTGTTGTGGAGTGACCTTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 90 bp ATGAAGATGAGCTGGGAGAAGAACAGAGCCGTGATGAGGTTCTTGTaGATGCTGTGCAGGTTGGAGCGCAGTGTCCGAACGAGTGAGAGA +
Preference number: 5 (lower is better)
Translates to: MKMSWEKNRAVMRFL*MLCRLERSVRTSER
Trigger: TCTCTCACTCGTTCGGACACTGCGCTCCAACCTGCACAGCATCCACAAGAACCTCATCACGGCTCTGTTCTTCTCCCAGCTCATCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp CGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTGGTTGGCATCTGTAACGTaGATAAAGACCTGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: RSYASLNEVHVSLWRHLWLASVT*IKTCAV
Trigger: CACCGCGCAGGTCTTTATCAACGTTACAGATGCCAA...CCACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CAA 90 bp GCTCTGGCTCAATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTATTACCCACGGATCCTTaGGGGCATGGCACCGCTGCT +
Preference number: 5 (lower is better)
Translates to: ALAQWPLVQHGLDSVFSLLPTDP*GHGTAA
Trigger: AGCAGCGGTGCCATGCCCCAAAGGATCCGTGGGTAA...TAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCATTGAGCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TCCTTGGGCAATAGAGTGAGATGCCATTTCATGGCTCTCCAGTGGCTGCAGAGTACCGGCCTGTGGGTGTaGGCATCTGTAACGTTGATA +
Preference number: 5 (lower is better)
Translates to: SLGNRVRCHFMALQWLQSTGLWV*ASVTLI
Trigger: TATCAACGTTACAGATGCCAACACCCACAGGCCGGT...ACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCTCACTCTATTGCCCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CAA 90 bp ATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTCTGGGCGCGTTGTCATaGGCGTCGAGGATAAGGATC +
Preference number: 5 (lower is better)
Translates to: MASCTAWFGFCLQSKDGALGALS*ASRIRI
Trigger: GATCCTTATCCTCGACGCCAATGACAACGCGCCCAG...AGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CAA 90 bp AAGGACGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCCGGACAGTGATGCTGTaGGTCAGCATGTCATCTGTA +
Preference number: 5 (lower is better)
Translates to: KDGAMPALMKSTSPSGDIRTVML*VSMSSV
Trigger: TACAGATGACATGCTGACCAACAGCATCACTGTCCG...GATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CAA 90 bp TGGCTGCAGAGTCAAAGCAGTGTAAAGCATACACAGCTCCCATCTTCTCCCAAGTTCAGGGTGGCAATGTaGGTGGACGTCTCTCCCATC +
Preference number: 5 (lower is better)
Translates to: WLQSQSSVKHTQLPSSPKFRVAM*VDVSPI
Trigger: GATGGGAGAGACGTCCACCAACATTGCCACCCTGAA...CTTGGGAGAAGATGGGAGCTGTGTATGCTTTACACTGCTTTGACTCTGCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp ATGGCCTCTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTAGAAGTTCACAGCCCTaGGCTGACCACCCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: MASCTAWFGFCLQSKDGARSSQP*ADHPPV
Trigger: GACTGGAGGGTGGTCAGCCAAGGGCTGTGAACTTCT...AGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAGAGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp CGTAGAGCCAGCTGCTATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCAACAAAGATGACTGTGTaGATGATTATAACCGTTCCG +
Preference number: 5 (lower is better)
Translates to: RRASCYGRDPHTRCLLVPTKMTV*MIITVP
Trigger: CGGAACGGTTATAATCATCAACACAGTCATCTTTGT...TGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGGCTCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp CCAGCTGCTATGGCAGGGACCCTCACACAAGGTGCCTGCTTGTCCCATAGGCAGACAAAGATGACTGTGTaGATGATTATAACCGTTCCG +
Preference number: 5 (lower is better)
Translates to: PAAMAGTLTQGACLSHRQTKMTV*MIITVP
Trigger: CGGAACGGTTATAATCATCAACACAGTCATCTTTGT...CTGCCTATGGGACAAGCAGGCACCTTGTGTGAGGGTCCCTGCCATAGCAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp ATTGAAGTTTCATTACTGCCTCTGTGTGTGGGAAGAATTGCCAGGCGTGTGGAATTCATGGCCACCCCATaGAGATGCTCACGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: IEVSLLPLCVGRIARRVEFMATP*RCSRPG
Trigger: GCCAGGCCGTGAGCATCTCAATGGGGTGGCCATGAA...TTCCACACGCCTGGCAATTCTTCCCACACACAGAGGCAGTAATGAAACTTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239396.2
CDS CCA 90 bp CAAATTGAAGTTTCATTACTGCCTTCTGAGTCAGAACCGTTGGCCTaGGCACTCCCTGTGCGTACATTCATGGCCACCCCATTGAGATGC +
Preference number: 5 (lower is better)
Translates to: QIEVSLLPSESEPLA*ALPVRTFMATPLRC
Trigger: GCATCTCAATGGGGTGGCCATGAATGTACGCACAGGGAGTGCCCAGGCCAACGGTTCTGACTCAGAAGGCAGTAATGAAACTTCAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS-3UTR CAA 90 bp CCATGTCTTGTAGGCTTTCATCTCACCAGTCAGTCACTAGCAGTCCTGTGCACTTCCTTCACCCTGACCTaGAGGGCGTCATTCATGTTC +
Preference number: 5 (lower is better)
Translates to: PCLVGFHLTSQSLAVLCTSFTLT*RASFMF
Trigger: GAACATGAATGACGCCCTCAAGGTCAGGGTGAAGGA...AGTGCACAGGACTGCTAGTGACTGACTGGTGAGATGAAAGCCTACAAGACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp GTTGACTCATTCCAGATTCAAGTACAACTGTGCAAGCTTCCTTGGGCAATAGAGTTACCCACGGATCCTTaGGGGCATGGCACCGCTGCT +
Preference number: 5 (lower is better)
Translates to: VDSFQIQVQLCKLPWAIELPTDP*GHGTAA
Trigger: AGCAGCGGTGCCATGCCCCAAAGGATCCGTGGGTAA...CTCTATTGCCCAAGGAAGCTTGCACAGTTGTACTTGAATCTGGAATGAGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TCCTTGGGCAATAGAGTGAGATGCCATTTCATGGCTCTCCAGTGGCTGCAGAGTACTGCAAGAATCATGTaGGCGGTGACGATGACGAAG +
Preference number: 5 (lower is better)
Translates to: SLGNRVRCHFMALQWLQSTARIM*AVTMTK
Trigger: CTTCGTCATCGTCACCGCCAACATGATTCTTGCAGT...ACTCTGCAGCCACTGGAGAGCCATGAAATGGCATCTCACTCTATTGCCCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 90 bp CAGGTTTTCTCGAATTCGCTCTCGATACTCAGACTGCTCAAAGACTaGGCTGTGGTCGTTAGTGTCACTGACAGTTACGGTGAGGTAGGT +
Preference number: 5 (lower is better)
Translates to: QVFSNSLSILRLLKD*AVVVSVTDSYGEVG
Trigger: ACCTACCTCACCGTAACTGTCAGTGACACTAACGACCACAGCCCAGTCTTTGAGCAGTCTGAGTATCGAGAGCGAATTCGAGAAAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CAA 90 bp ATTTTTAGACAGCAATTTAAAACCCAGGGTGCCGTTGCAGAGGCACCGCTAGGCGCTCAGCTCGTTGCCTaGCAGAAAGGTGTAATTGAG +
Preference number: 5 (lower is better)
Translates to: IFRQQFKTQGAVAEAPLGAQLVA*QKGVIE
Trigger: CTCAATTACACCTTTCTGCAAGGCAACGAGCTGAGC...GCCTAGCGGTGCCTCTGCAACGGCACCCTGGGTTTTAAATTGCTGTCTAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS-3UTR CAA 90 bp CTTGTACAGCATGGTTTGGATTCTGTCTTCAGTCTAAGGACGGAGCTATGCCAGTGGCCATTGGTCTTGTaGCAGTCGGGATCAAAGCCT +
Preference number: 5 (lower is better)
Translates to: LVQHGLDSVFSLRTELCQWPLVL*QSGSKP
Trigger: AGGCTTTGATCCCGACTGCAACAAGACCAATGGCCA...CTGGCATAGCTCCGTCCTTAGACTGAAGACAGAATCCAAACCATGCTGTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp CGGAGCTATGCCAGCCTTAATGAAGTCCACGTCTCCCTCTGGAGACATCTGTGGATAATGGTGCTTTCTTaGGCAGGAAACCTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: RSYASLNEVHVSLWRHLWIMVLS*AGNLCR
Trigger: TCTGCAAAGGTTTCCTGCCAAAGAAAGCACCATTAT...CCACAGATGTCTCCAGAGGGAGACGTGGACTTCATTAAGGCTGGCATAGCTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp TTTCATCTCACCAGTCAGTCACTAGCAGTCCTGTGCACTTCTGAGAGCACAGCTTCCCTCCTCGGAGTCTaGATGGTAATGACACAGTCA +
Preference number: 5 (lower is better)
Translates to: FHLTSQSLAVLCTSESTASLLGV*MVMTQS
Trigger: TGACTGTGTCATTACCATCAAGACTCCGAGGAGGGA...AGCTGTGCTCTCAGAAGTGCACAGGACTGCTAGTGACTGACTGGTGAGATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp GTTGACTCATTCCAGATTCAAGTACAACTGTGCAAGCTTCCTTGGGCAATAGAGCTCCTTGCACTGGCATaGGCCATTGGTCTTGTTGCA +
Preference number: 5 (lower is better)
Translates to: VDSFQIQVQLCKLPWAIELLALA*AIGLVA
Trigger: TGCAACAAGACCAATGGCCAATGCCAGTGCAAGGAG...CTCTATTGCCCAAGGAAGCTTGCACAGTTGTACTTGAATCTGGAATGAGTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp CCAAAAATCTTAATTTATTATAGATGCATCATCTCACCTGTGTTGCCATCCAGTCCTGCCCTGGTACCATaGTTGGCAATAAACGCAGCC +
Preference number: 5 (lower is better)
Translates to: PKILIYYRCIISPVLPSSPALVP*LAINAA
Trigger: GGCTGCGTTTATTGCCAACAATGGTACCAGGGCAGG...ACTGGATGGCAACACAGGTGAGATGATGCATCTATAATAAATTAAGATTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp CCAAAAATCTTAATTTATTATAGATGCATCATCTCACCTGTGTTGCCATCCAGTTTCAGGGTGGCAATGTaGGTGGACGTCTCTCCCATC +
Preference number: 5 (lower is better)
Translates to: PKILIYYRCIISPVLPSSFRVAM*VDVSPI
Trigger: GATGGGAGAGACGTCCACCAACATTGCCACCCTGAA...ACTGGATGGCAACACAGGTGAGATGATGCATCTATAATAAATTAAGATTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 90 bp CCCCTTTCTTTCATAATAATGGTGCTTTCTTTGGCAGGAAACCTTTaGAGACAGGACAAAGATGACTGTGTTGATGATTATAACCGTTCC +
Preference number: 5 (lower is better)
Translates to: PLSFIIMVLSLAGNL*RQDKDDCVDDYNRS
Trigger: GGAACGGTTATAATCATCAACACAGTCATCTTTGTCCTGTCTGCAAAGGTTTCCTGCCAAAGAAAGCACCATTATTATGAAAGAAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp CCAAAAATCTTAATTTATTATAGATGCATCATCTCACCTGTGTTGCCATCCAGTAGGGTGTGGCATAGCTaGTTCACAGTTCTTTCCACC +
Preference number: 5 (lower is better)
Translates to: PKILIYYRCIISPVLPSSRVWHS*FTVLST
Trigger: GGTGGAAAGAACTGTGAACAAGCTATGCCACACCCT...ACTGGATGGCAACACAGGTGAGATGATGCATCTATAATAAATTAAGATTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS-3UTR CAA 90 bp CCAAAAATCTTAATTTATTATAGATGCATCATCTCACCTGTGTTGCCATCCAGTACAAAGATGTCATCCTaGGTGGTGGACAGTACTGTG +
Preference number: 5 (lower is better)
Translates to: PKILIYYRCIISPVLPSSTKMSS*VVDSTV
Trigger: CACAGTACTGTCCACCACCAAGGATGACATCTTTGT...ACTGGATGGCAACACAGGTGAGATGATGCATCTATAATAAATTAAGATTTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 72 bp CCGCAGCTCCCAAGCGGCTGCTCCCAACTCCAGGGCTaGCAGGGCGGCGGCGGCCAGCAACACCAGCGCGGG +
Preference number: 6 (lower is better)
Translates to: PQLPSGCSQLQG*QGGGGQQHQRG
Trigger: CCCGCGCTGGTGTTGCTGGCCGCCGCCGCCCTGCCAGCCCTGGAGTTGGGAGCAGCCGCTTGGGAGCTGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 72 bp CTGAACCTCCTGGCCGCAGGCAAATGGGTCCGCGCCTaGAGCCGGTCCCGGCGACCGGCGGGCAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: LNLLAAGKWVRA*SRSRRPAGSCR
Trigger: CCTGCAGCTGCCCGCCGGTCGCCGGGACCGGCTGCAGGCGCGGACCCATTTGCCTGCGGCCAGGAGGTTCAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 72 bp AGTCCCCGCGCCAAGCCCAAGCCTCCGACCGGCTGCTaGCCCCTCGCGGCTCACGTCCAGCAGCTCCCGAGG +
Preference number: 6 (lower is better)
Translates to: SPRAKPKPPTGC*PLAAHVQQLPR
Trigger: CCTCGGGAGCTGCTGGACGTGAGCCGCGAGGGGCCAGCAGCCGGTCGGAGGCTTGGGCTTGGCGCGGGGACT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 72 bp GACGCAGCTCAGCTGAACCTCCTGGCCGCAGGCAAATaGGTCCGCGCCTGCAGCCGGTCCCGGCGACCGGCG +
Preference number: 6 (lower is better)
Translates to: DAAQLNLLAAGK*VRACSRSRRPA
Trigger: CGCCGGTCGCCGGGACCGGCTGCAGGCGCGGACCCATTTGCCTGCGGCCAGGAGGTTCAGCTGAGCTGCGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 72 bp CGGCGACCGGCGGGCAGCTGCAGGCGGGGAAGTTGGTaGTGGCCTCAAGCACCGAAGTCAGCGAGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: RRPAGSCRRGSW*WPQAPKSARLR
Trigger: GCGCAGCCTCGCTGACTTCGGTGCTTGAGGCCATCACCAACTTCCCCGCCTGCAGCTGCCCGCCGGTCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 72 bp CGCGCGTCCCAGGGCGCACACCAGACGCAGCTCAGCTaGACCTCCTGGCCGCAGGCAAATGGGTCCGCGCCT +
Preference number: 6 (lower is better)
Translates to: RASQGAHQTQLS*TSWPQANGSAP
Trigger: AGGCGCGGACCCATTTGCCTGCGGCCAGGAGGTTCAGCTGAGCTGCGTCTGGTGTGCGCCCTGGGACGCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CAA 90 bp CCTTTCCGCTGCTCCTGGGGCTGGCTGCTAAGCACGGCCACTGGCTaGGCCAGGACCCCACTTTCCGGGTCAGAGGGCCGGTCGCCACAG +
Preference number: 6 (lower is better)
Translates to: PFRCSWGWLLSTATG*ARTPLSGSEGRSPQ
Trigger: CTGTGGCGACCGGCCCTCTGACCCGGAAAGTGGGGTCCTGGCCAAGCCAGTGGCCGTGCTTAGCAGCCAGCCCCAGGAGCAGCGGAAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS CCA 72 bp CCGCTGCTCCTGGGGCTGGCTGCTAAGCACGGCCACTaGCTTGGCCAGGACCCCACTTTCCGGGTCAGAGGG +
Preference number: 6 (lower is better)
Translates to: PLLLGLAAKHGH*LGQDPTFRVRG
Trigger: CCCTCTGACCCGGAAAGTGGGGTCCTGGCCAAGCCAGTGGCCGTGCTTAGCAGCCAGCCCCAGGAGCAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS CAA 72 bp GTCCCGGCGACCGGCGGGCAGCTGCAGGCGGGGAAGTaGGTGATGGCCTCAAGCACCGAAGTCAGCGAGGCT +
Preference number: 6 (lower is better)
Translates to: VPATGGQLQAGK*VMASSTEVSEA
Trigger: AGCCTCGCTGACTTCGGTGCTTGAGGCCATCACCAACTTCCCCGCCTGCAGCTGCCCGCCGGTCGCCGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CAA 72 bp GCCCCGCCTAGACCGTCGCACCACCCCCGCCCGAGGTaGGGACAGGTTAAGCAACGATGGCGACACCGAGGG +
Preference number: 6 (lower is better)
Translates to: APPRPSHHPRPR*GQVKQRWRHRG
Trigger: CCCTCGGTGTCGCCATCGTTGCTTAACCTGTCCCAACCTCGGGCGGGGGTGGTGCGACGGTCTAGGCGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CAA 72 bp TGCTCCTGGGGCTGGCTGCTAAGCACGGCCACTGGCTaGGCCAGGACCCCACTTTCCGGGTCAGAGGGCCGG +
Preference number: 6 (lower is better)
Translates to: CSWGWLLSTATG*ARTPLSGSEGR
Trigger: CCGGCCCTCTGACCCGGAAAGTGGGGTCCTGGCCAAGCCAGTGGCCGTGCTTAGCAGCCAGCCCCAGGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS GCA 72 bp GGTCGCCTCTATTACCAGCTCTACCCAAACGGCGCCTaGCGCGCGTCCCAGGGCGCACACCAGACGCAGCTC +
Preference number: 6 (lower is better)
Translates to: GRLYYQLYPNGA*RASQGAHQTQL
Trigger: GAGCTGCGTCTGGTGTGCGCCCTGGGACGCGCGGCAGGCGCCGTTTGGGTAGAGCTGGTAATAGAGGCGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 72 bp CCGCAGGCTCATTCTCAGGCACTGACACCTGGTAGCTaGGCAGCGGGAACTGCGGGCTCGTGCTGCTGCCCG +
Preference number: 6 (lower is better)
Translates to: PQAHSQALTPGS*AAGTAGSCCCP
Trigger: CGGGCAGCAGCACGAGCCCGCAGTTCCCGCTGCCCAGCTACCAGGTGTCAGTGCCTGAGAATGAGCCTGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 72 bp CGGGTCCGCACTCGCAGGAGTAGCCTCGAGGAGTGTTaGGGGAGCGCACACAGGCTGCCACGTGCTTGCAGG +
Preference number: 6 (lower is better)
Translates to: RVRTRRSSLEEC*GSAHRLPRACR
Trigger: CCTGCAAGCACGTGGCAGCCTGTGTGCGCTCCCCCAACACTCCTCGAGGCTACTCCTGCGAGTGCGGACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp AGCTGCAGCTTCTTCCCTGCCAGCACCGCCCTCAGGTaGTTCCGCACCTCCCTGTGGGCCACGCAGTGGAAC +
Preference number: 6 (lower is better)
Translates to: SCSFFPASTALR*FRTSLWATQWN
Trigger: GTTCCACTGCGTGGCCCACAGGGAGGTGCGGAAGCACCTGAGGGCGGTGCTGGCAGGGAAGAAGCTGCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
CDS GCA 72 bp AGCAGAGTGGCCCGAGTGGTGGCCGAGTCATCCAGCTaGAGCTTCTTCCCTGCCAGCACCGCCCTCAGGTGC +
Preference number: 6 (lower is better)
Translates to: SRVARVVAESSS*SFFPASTALRC
Trigger: GCACCTGAGGGCGGTGCTGGCAGGGAAGAAGCTGCAGCTGGATGACTCGGCCACCACTCGGGCCACTCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
CDS CCA 72 bp CCAGCCAGGCTCTCGTCGGGCCAGCCAGCTGGGACGTaGTTGGCCAGAGCATCTTTTGGGGTGCTATGGGCG +
Preference number: 6 (lower is better)
Translates to: PARLSSGQPAGT*LARASFGVLWA
Trigger: CGCCCATAGCACCCCAAAAGATGCTCTGGCCAACCACGTCCCAGCTGGCTGGCCCGACGAGAGCCTGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226840.2
CDS TCA 72 bp CATCGCCTTCGTCTGGGTCGTGCGCGCGCAGTTCGATaGCCGCAGTGCCCGCAGGCTCATTCTCAGGCACTG +
Preference number: 6 (lower is better)
Translates to: HRLRLGRARAVR*PQCPQAHSQAL
Trigger: CAGTGCCTGAGAATGAGCCTGCGGGCACTGCGGTCATCGAACTGCGCGCGCACGACCCAGACGAAGGCGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 72 bp CAAGGTGATAAGGCCACCGCCGCTCTGGCTGCTGAGTaGGAAGCGGTTGCGGGTGTTCCCACCCGTCAGCTG +
Preference number: 6 (lower is better)
Translates to: QGDKATAALAAE*EAVAGVPTRQL
Trigger: CAGCTGACGGGTGGGAACACCCGCAACCGCTTCGCACTCAGCAGCCAGAGCGGCGGTGGCCTTATCACCTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 72 bp CCTGCAGGTCCTCTGACGGGAAGAACCGGCCACGGGTaGCACCGGGGAGCAGTGCCGAGAAAGTCACGTTCA +
Preference number: 6 (lower is better)
Translates to: PAGPLTGRTGHG*HRGAVPRKSRS
Trigger: TGAACGTGACTTTCTCGGCACTGCTCCCCGGTGGCACCCGTGGCCGGTTCTTCCCGTCAGAGGACCTGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 72 bp AGGGGCAGTGCCAAGGTGATAAGGCCACCGCCGCTCTaGCTGCTGAGTGCGAAGCGGTTGCGGGTGTTCCCA +
Preference number: 6 (lower is better)
Translates to: RGSAKVIRPPPL*LLSAKRLRVFP
Trigger: TGGGAACACCCGCAACCGCTTCGCACTCAGCAGCCAGAGCGGCGGTGGCCTTATCACCTTGGCACTGCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 72 bp TTCCCTCTCAGCCCTGGGCTCTGGTTGTGCCGTGAGTaGGGTAGTCCTCCGGTTGGTCAGCCTCACCACGGG +
Preference number: 6 (lower is better)
Translates to: FPLSPGLWLCRE*GSPPVGQPHHG
Trigger: CCCGTGGTGAGGCTGACCAACCGGAGGACTACCCCACTCACGGCACAACCAGAGCCCAGGGCTGAGAGGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp CCAGCCAGGCTCTCGTCGGGCCAGCCAGCTGGGACGTaGTTGGCCAGAGCATCTGCTTTTGGGGTGCTATGG +
Preference number: 6 (lower is better)
Translates to: PARLSSGQPAGT*LARASAFGVLW
Trigger: CCATAGCACCCCAAAAGCAGATGCTCTGGCCAACCACGTCCCAGCTGGCTGGCCCGACGAGAGCCTGGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000239489.2
CDS CAA 72 bp CACCACCTGCGCCCTCCAGCAGACGATAGCGCATGTTaGCGTTGGAAGGGGCATCCCCGTCGGTGGCACGGA +
Preference number: 6 (lower is better)
Translates to: HHLRPPADDSAC*RWKGHPRRWHG
Trigger: TCCGTGCCACCGACGGGGATGCCCCTTCCAACGCAAACATGCGCTATCGTCTGCTGGAGGGCGCAGGTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CAA 90 bp CTGAGGGGATTCGGGCTGCCCCGATCCACAGCGAGAGCCCAAAGGTaGTACACGGCCACATTCTCTCTGTCCAGCCGGCGCTGGGTACGG +
Preference number: 6 (lower is better)
Translates to: LRGFGLPRSTARAQR*YTATFSLSSRRWVR
Trigger: CCGTACCCAGCGCCGGCTGGACAGAGAGAATGTGGCCGTGTACAACCTTTGGGCTCTCGCTGTGGATCGGGGCAGCCCGAATCCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 72 bp GCCAGGCTCATCGGGGTGTCTCCTCCGTCTGCTGGATaGGGTTTCCCTCTCAGCCCTGGGCTCTGGTTGTGC +
Preference number: 6 (lower is better)
Translates to: ARLIGVSPPSAG*GFPLSPGLWLC
Trigger: GCACAACCAGAGCCCAGGGCTGAGAGGGAAACCTCATCCAGCAGACGGAGGAGACACCCCGATGAGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp CTTGGTCTCCCGGTCCAGGGAGCGGGCTGTGGTCACTaGACCCGTGGCGGCATCGATGAGGAAGTAGCCATT +
Preference number: 6 (lower is better)
Translates to: LGLPVQGAGCGH*TRGGIDEEVAI
Trigger: AATGGCTACTTCCTCATCGATGCCGCCACGGGTGCAGTGACCACAGCCCGCTCCCTGGACCGGGAGACCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 72 bp ACCACCTGCGCCCTCCAGCAGACGATAGCGCATGTTTaGGTTGGAAGGGGCATCCCCGTCGGTGGCACGGAT +
Preference number: 6 (lower is better)
Translates to: TTCALQQTIAHV*VGRGIPVGGTD
Trigger: ATCCGTGCCACCGACGGGGATGCCCCTTCCAACGCAAACATGCGCTATCGTCTGCTGGAGGGCGCAGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 72 bp CGGGAAGAACCGGCCACGGGTGCCACCGGGGAGCAGTaGCGAGAAAGTCACGTTCAGGATGTTGGAGCTGAC +
Preference number: 6 (lower is better)
Translates to: REEPATGATGEQ*RESHVQDVGAD
Trigger: GTCAGCTCCAACATCCTGAACGTGACTTTCTCGGCACTGCTCCCCGGTGGCACCCGTGGCCGGTTCTTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 72 bp GAATGCCACCGCCCATCGCTCACACCTCCAGGAACCTaGGGTGTCACCGTGGTTGTGGTCTCACCTGCCGAG +
Preference number: 6 (lower is better)
Translates to: ECHRPSLTPPGT*GVTVVVVSPAE
Trigger: CTCGGCAGGTGAGACCACAACCACGGTGACACCGCAGGTTCCTGGAGGTGTGAGCGATGGGCGGTGGCATTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp CCCACGGATCCTTTGGGGCATGGCACCGCTGCTGGCTaGCCAAATTTCGTCTGTGGCCACCAGATGCCAGCC +
Preference number: 6 (lower is better)
Translates to: PTDPLGHGTAAG*PNFVCGHQMPA
Trigger: GGCTGGCATCTGGTGGCCACAGACGAAATTTGGGCAGCCAGCAGCGGTGCCATGCCCCAAAGGATCCGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp TGCGGGCCAGAAGCTGGTAGGCCGTGCGCACATCATTaGCAAAGAGGGTGCTGTTCCCCTGCGTGGCGTTCC +
Preference number: 6 (lower is better)
Translates to: CGPEAGRPCAHH*QRGCCSPAWRS
Trigger: GGAACGCCACGCAGGGGAACAGCACCCTCTTTGGCAATGATGTGCGCACGGCCTACCAGCTTCTGGCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp GAGCCAAGGGAGGATGTGCGGGAGGATGTGGGGCTCTaGTCACAATCAGCCAGCTTCTCTCGCAGCCGGGAC +
Preference number: 6 (lower is better)
Translates to: EPREDVREDVGL*SQSASFSRSRD
Trigger: GTCCCGGCTGCGAGAGAAGCTGGCTGATTGTGAGCAGAGCCCCACATCCTCCCGCACATCCTCCCTTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS CCA 72 bp CATCTGGTAGCTAAGGCGTCCTGCATCGCCTTCGTCTaGGTCGTGCGCGCGCAGTTCGATGACCGCAGTGCC +
Preference number: 6 (lower is better)
Translates to: HLVAKASCIAFV*VVRAQFDDRSA
Trigger: GGCACTGCGGTCATCGAACTGCGCGCGCACGACCCAGACGAAGGCGATGCAGGACGCCTTAGCTACCAGATG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 72 bp CTGCGCCCTCCAGCAGACGATAGCGCATGTTTGCGTTaGAAGGGGCATCCCCGTCGGTGGCACGGATGGTCA +
Preference number: 6 (lower is better)
Translates to: LRPPADDSACLR*KGHPRRWHGWS
Trigger: TGACCATCCGTGCCACCGACGGGGATGCCCCTTCCAACGCAAACATGCGCTATCGTCTGCTGGAGGGCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 72 bp GCACACTGCCCAGTGTCCATGTCGCAGGCACGGCTGTaGGAGCCGTGGGGGAAACAGTCACAGGGAAGGCAA +
Preference number: 6 (lower is better)
Translates to: AHCPVSMSQARL*EPWGKQSQGRQ
Trigger: TTGCCTTCCCTGTGACTGTTTCCCCCACGGCTCCCACAGCCGTGCCTGCGACATGGACACTGGGCAGTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp CGCTGCAGTGCCGGACTGCGTTACCCACGGATCCTTTaGGGCATGGCACCGCTGCTGGCTGCCCAAATTTCG +
Preference number: 6 (lower is better)
Translates to: RCSAGLRYPRIL*GMAPLLAAQIS
Trigger: CGAAATTTGGGCAGCCAGCAGCGGTGCCATGCCCCAAAGGATCCGTGGGTAACGCAGTCCGGCACTGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp GGCTGTGGACTCGCCCAGGGCGGTGCGGAGCATGTCTaGCCCTTCGCTGTAGGTGTTGTTGCAGTTGAGGGA +
Preference number: 6 (lower is better)
Translates to: GCGLAQGGAEHV*PFAVGVVAVEG
Trigger: TCCCTCAACTGCAACAACACCTACAGCGAAGGGCCAGACATGCTCCGCACCGCCCTGGGCGAGTCCACAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
CDS CAA 72 bp TTCGGGCTGCCCCGATCCACAGCGAGAGCCCAAAGGTaGTACACGGCCACATTCTCTCTGTCCAGCCGGCGC +
Preference number: 6 (lower is better)
Translates to: FGLPRSTARAQR*YTATFSLSSRR
Trigger: GCGCCGGCTGGACAGAGAGAATGTGGCCGTGTACAACCTTTGGGCTCTCGCTGTGGATCGGGGCAGCCCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CAA 72 bp CCGCTGCAGTGCCGGACTGCGTTACCCACGGATCCTTaGGGGCATGGCACCGCTGCTGGCTGCCCAAATTTC +
Preference number: 6 (lower is better)
Translates to: PLQCRTALPTDP*GHGTAAGCPNF
Trigger: GAAATTTGGGCAGCCAGCAGCGGTGCCATGCCCCAAAGGATCCGTGGGTAACGCAGTCCGGCACTGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CAA 90 bp CCATCTGACACAGACACCTCCATGAGCGCCTCCAGTGGCCGGTTGTaGTCCAGATCCCGGCTGAGCTGCAACTCTCCTGTGGCGGGATCC +
Preference number: 6 (lower is better)
Translates to: PSDTDTSMSASSGRL*SRSRLSCNSPVAGS
Trigger: GGATCCCGCCACAGGAGAGTTGCAGCTCAGCCGGGATCTGGACAACAACCGGCCACTGGAGGCGCTCATGGAGGTGTCTGTGTCAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CAA 90 bp AGTGGGGTTCCCTCACTGTACACCATAGCACTCACCACGGGGGTGTaGATGACAGGCCGGTTAGGCAGTCGGAGGCTGCGATGGTCGGGG +
Preference number: 6 (lower is better)
Translates to: SGVPSLYTIALTTGV*MTGRLGSRRLRWSG
Trigger: CCCCGACCATCGCAGCCTCCGACTGCCTAACCGGCCTGTCATCAACACCCCCGTGGTGAGTGCTATGGTGTACAGTGAGGGAACCCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 72 bp CTCACGGTCCACCACAGCCCGTGTGCGCACGACACCTaGTCGTGCGTCTATCTCAAAGACACCACCTGCGCC +
Preference number: 6 (lower is better)
Translates to: LTVHHSPCAHDT*SCVYLKDTTCA
Trigger: GGCGCAGGTGGTGTCTTTGAGATAGACGCACGATCAGGTGTCGTGCGCACACGGGCTGTGGTGGACCGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 72 bp GCGTTCTCCCCTGCATCTGCGTCCACCGCTTGGATGTaGAGGACTGAGTGGCCGAGGGGCACATTCTCTAGC +
Preference number: 6 (lower is better)
Translates to: AFSPASASTAWM*RTEWPRGTFSS
Trigger: GCTAGAGAATGTGCCCCTCGGCCACTCAGTCCTGCACATCCAAGCGGTGGACGCAGATGCAGGGGAGAACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 72 bp CAAACTGGCCAGGCTCATCGGGGTGTCTCCTCCGTCTaGTGGATGAGGTTTCCCTCTCAGCCCTGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: QTGQAHRGVSSV*WMRFPSQPWAL
Trigger: CAGAGCCCAGGGCTGAGAGGGAAACCTCATCCAGCAGACGGAGGAGACACCCCGATGAGCCTGGCCAGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp TACTGTCCAGAGAGGCTGTGGACTCGCCCAGGGCGGTaGGGAGCATGTCTGGCCCTTCGCTGTAGGTGTTGT +
Preference number: 6 (lower is better)
Translates to: YCPERLWTRPGR*GACLALRCRCC
Trigger: ACAACACCTACAGCGAAGGGCCAGACATGCTCCGCACCGCCCTGGGCGAGTCCACAGCCTCTCTGGACAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
CDS CCA 72 bp CTGTCCTGGGTGGCAAACGCCAGGGAGACGGTGAAGTaGAAGCGTTGCCGCAGGCCTCGGAAGGTAACGAAG +
Preference number: 6 (lower is better)
Translates to: LSWVANARETVK*KRCRRPRKVTK
Trigger: CTTCGTTACCTTCCGAGGCCTGCGGCAACGCTTCCACTTCACCGTCTCCCTGGCGTTTGCCACCCAGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp ACTGGCCAGGCTCATCGGGGTGTCTCCTCCGTCTGCTaGATGAGGTTTCCCTCTCAGCCCTGGGCTCTGGTT +
Preference number: 6 (lower is better)
Translates to: TGQAHRGVSSVC*MRFPSQPWALV
Trigger: AACCAGAGCCCAGGGCTGAGAGGGAAACCTCATCCAGCAGACGGAGGAGACACCCCGATGAGCCTGGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CAA 72 bp TTGCCCTGCGCCTGCCGGTGTAACTCCACGCTGACCTaGGTCTCCACCTTCAGGTGGGGCTCAGTGTCCAAC +
Preference number: 6 (lower is better)
Translates to: LPCACRCNSTLT*VSTFRWGSVSN
Trigger: GTTGGACACTGAGCCCCACCTGAAGGTGGAGACCAAGGTCAGCGTGGAGTTACACCGGCAGGCGCAGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS TCA 72 bp GGGGAGCCGTGGTCCACAGCACTAACTTTGAGTACATaGGTGTCCTTGGTCTCCCGGTCCAGGGAGCGGGCT +
Preference number: 6 (lower is better)
Translates to: GEPWSTALTLST*VSLVSRSRERA
Trigger: AGCCCGCTCCCTGGACCGGGAGACCAAGGACACTCATGTACTCAAAGTTAGTGCTGTGGACCACGGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 72 bp GAGTGGCCGAGGGGCACATTCTCTAGCACGGCAGCCTaGAAGGGGCTGCTCACAAAGATGGGCGCATTGTCG +
Preference number: 6 (lower is better)
Translates to: EWPRGTFSSTAA*KGLLTKMGALS
Trigger: CGACAATGCGCCCATCTTTGTGAGCAGCCCCTTTCAGGCTGCCGTGCTAGAGAATGTGCCCCTCGGCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 72 bp GCATGTCTGGCCCTTCGCTGTAGGTGTTGTTGCAGTTaGGGGAGCGCGTTAGCAGAGTGGCCCGAGTGGTGG +
Preference number: 6 (lower is better)
Translates to: ACLALRCRCCCS*GSALAEWPEWW
Trigger: CCACCACTCGGGCCACTCTGCTAACGCGCTCCCTCAACTGCAACAACACCTACAGCGAAGGGCCAGACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
CDS TCA 72 bp AGTGATTGCCCTGCGCCTGCCGGTGTAACTCCACGCTaGCCTTGGTCTCCACCTTCAGGTGGGGCTCAGTGT +
Preference number: 6 (lower is better)
Translates to: SDCPAPAGVTPR*PWSPPSGGAQC
Trigger: ACACTGAGCCCCACCTGAAGGTGGAGACCAAGGTCAGCGTGGAGTTACACCGGCAGGCGCAGGGCAATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS GCA 72 bp CGGTCAGATCCAGTGACTTCTTGGAGCCGCTCTGAGTaGCCTGGGCAGCGCAGCTGTAGTTCCCCACGTAAC +
Preference number: 6 (lower is better)
Translates to: RSDPVTSWSRSE*PGQRSCSSPRN
Trigger: GTTACGTGGGGAACTACAGCTGCGCTGCCCAGGGCACTCAGAGCGGCTCCAAGAAGTCACTGGATCTGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp GCTGGTAGGCCGTGCGCACATCATTGCCAAAGAGGGTaGTGTTCCCCTGCGTGGCGTTCCTCAGAGCCTTTG +
Preference number: 6 (lower is better)
Translates to: AGRPCAHHCQRG*CSPAWRSSEPL
Trigger: CAAAGGCTCTGAGGAACGCCACGCAGGGGAACAGCACCCTCTTTGGCAATGATGTGCGCACGGCCTACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp GGTCAAAGCCCTGCTGGCGGCTCTCATGCTGTAAGATaGGGGCCAGAAGCTGGTAGGCCGTGCGCACATCAT +
Preference number: 6 (lower is better)
Translates to: GQSPAGGSHAVR*GPEAGRPCAHH
Trigger: ATGATGTGCGCACGGCCTACCAGCTTCTGGCCCGCATCTTACAGCATGAGAGCCGCCAGCAGGGCTTTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp CATCGCCAGAGCCAAGGGAGGATGTGCGGGAGGATGTaGGGCTCTGCTCACAATCAGCCAGCTTCTCTCGCA +
Preference number: 6 (lower is better)
Translates to: HRQSQGRMCGRM*GSAHNQPASLA
Trigger: TGCGAGAGAAGCTGGCTGATTGTGAGCAGAGCCCCACATCCTCCCGCACATCCTCCCTTGGCTCTGGCGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS CAA 72 bp ACAGACACCTCCATGAGCGCCTCCAGTGGCCGGTTGTaGTCCAGATCCCGGCTGAGCTGCAACTCTCCTGTG +
Preference number: 6 (lower is better)
Translates to: TDTSMSASSGRL*SRSRLSCNSPV
Trigger: CACAGGAGAGTTGCAGCTCAGCCGGGATCTGGACAACAACCGGCCACTGGAGGCGCTCATGGAGGTGTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CAA 72 bp AAGGCCTTGAGGTCCACAAAGGAGCCAGAGGTGCAGTaGAAGAGCTCTGGGGGAAGCCAGCCCTTCTCCCCG +
Preference number: 6 (lower is better)
Translates to: KALRSTKEPEVQ*KSSGGSQPFSP
Trigger: CGGGGAGAAGGGCTGGCTTCCCCCAGAGCTCTTCAACTGCACCTCTGGCTCCTTTGTGGACCTCAAGGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CAA 72 bp CCCTCACTGTACACCATAGCACTCACCACGGGGGTGTaGATGACAGGCCGGTTAGGCAGTCGGAGGCTGCGA +
Preference number: 6 (lower is better)
Translates to: PSLYTIALTTGV*MTGRLGSRRLR
Trigger: TCGCAGCCTCCGACTGCCTAACCGGCCTGTCATCAACACCCCCGTGGTGAGTGCTATGGTGTACAGTGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CAA 90 bp TTCTCGTTCAAGGCCTTGAGGTCCACAAAGGAGCCAGAGGTGCAGTaGAAGAGCTCTGGGGGAAGCCAGCCCTTCTCCCCGCTGCAGTGC +
Preference number: 6 (lower is better)
Translates to: FSFKALRSTKEPEVQ*KSSGGSQPFSPLQC
Trigger: GCACTGCAGCGGGGAGAAGGGCTGGCTTCCCCCAGAGCTCTTCAACTGCACCTCTGGCTCCTTTGTGGACCTCAAGGCCTTGAACGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 72 bp CCCGGTCAGTGGCCTGGACTCGAAGCACAGCCGTGTTaGCGGCTACGTCTTCTGGGACTTGAACCACATAGC +
Preference number: 6 (lower is better)
Translates to: PGQWPGLEAQPC*RLRLLGLEPHS
Trigger: GCTATGTGGTTCAAGTCCCAGAAGACGTAGCCGTCAACACGGCTGTGCTTCGAGTCCAGGCCACTGACCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 72 bp GGCATCTGTAACGTTGATAAAGACCTGCGCGGTGTGTaGACGCGTGCCATCGGACGCGGTCACAGCCAGCAC +
Preference number: 6 (lower is better)
Translates to: GICNVDKDLRGV*TRAIGRGHSQH
Trigger: GTGCTGGCTGTGACCGCGTCCGATGGCACGCGTTCACACACCGCGCAGGTCTTTATCAACGTTACAGATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 72 bp TGTCCAACACACTCACCTGAATTCCCACTGACGCACTaGGGGGATTCGGGCTGCCCCGATCCACAGCGAGAG +
Preference number: 6 (lower is better)
Translates to: CPTHSPEFPLTH*GDSGCPDPQRE
Trigger: CTCTCGCTGTGGATCGGGGCAGCCCGAATCCCCTCAGTGCGTCAGTGGGAATTCAGGTGAGTGTGTTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 72 bp CAGAGTGCAGAGAGCGGTGACACTGTGGATACCATCTaGCACAGACACCTCCATGAGCGCCTCCAGTGGCCG +
Preference number: 6 (lower is better)
Translates to: QSAESGDTVDTI*HRHLHERLQWP
Trigger: CGGCCACTGGAGGCGCTCATGGAGGTGTCTGTGTCAGATGGTATCCACAGTGTCACCGCTCTCTGCACTCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 72 bp ACCGTGGTTGTGGTCTCACCTGCCGAGAACGTGAGCTaGAGCTGCTCCTCCACAATCTCCAGGGCGATGAAG +
Preference number: 6 (lower is better)
Translates to: TVVVVSPAENVS*SCSSTISRAMK
Trigger: CTTCATCGCCCTGGAGATTGTGGAGGAGCAGCTGCAGCTCACGTTCTCGGCAGGTGAGACCACAACCACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp AGGAACCTGCGGTGTCACCGTGGTTGTGGTCTCACCTaGCGAGAACGTGAGCTGCAGCTGCTCCTCCACAAT +
Preference number: 6 (lower is better)
Translates to: RNLRCHRGCGLT*RERELQLLLHN
Trigger: ATTGTGGAGGAGCAGCTGCAGCTCACGTTCTCGGCAGGTGAGACCACAACCACGGTGACACCGCAGGTTCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp TGCGTTACCCACGGATCCTTTGGGGCATGGCACCGCTaGTGGCTGCCCAAATTTCGTCTGTGGCCACCAGAT +
Preference number: 6 (lower is better)
Translates to: CVTHGSFGAWHR*WLPKFRLWPPD
Trigger: ATCTGGTGGCCACAGACGAAATTTGGGCAGCCAGCAGCGGTGCCATGCCCCAAAGGATCCGTGGGTAACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp CTCCCTGTGCGTACATTCATGGCCACCCCATTGAGATaGTCACGGCCTGGCTCCCTCCTCGGAGTCTTGATG +
Preference number: 6 (lower is better)
Translates to: LPVRTFMATPLR*SRPGSLLGVLM
Trigger: CATCAAGACTCCGAGGAGGGAGCCAGGCCGTGAGCATCTCAATGGGGTGGCCATGAATGTACGCACAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS CCA 72 bp AGCTCCGCGCACACAGTAATCCAACCGGAGCTGTTGTaGATTTGGAAGGGGAAGTCTGGGGCAGAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: SSAHTVIQPELL*IWKGKSGAEAG
Trigger: CCCTGCCTCTGCCCCAGACTTCCCCTTCCAAATCCACAACAGCTCCGGTTGGATTACTGTGTGCGCGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 72 bp ACTCCACTGGCACAGCGGCCTGAGCGAACGTTCACCTaGCAATGCTCCCCAGTGAAGTCCTCGAAGCACTCA +
Preference number: 6 (lower is better)
Translates to: TPLAQRPERTFT*QCSPVKSSKHS
Trigger: TGAGTGCTTCGAGGACTTCACTGGGGAGCATTGCCAGGTGAACGTTCGCTCAGGCCGCTGTGCCAGTGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp GCATGGCACCGCTGCTGGCTGCCCAAATTTCGTCTGTaGCCACCAGATGCCAGCCTCAAATGCTCTGGGACA +
Preference number: 6 (lower is better)
Translates to: AWHRCWLPKFRL*PPDASLKCSGT
Trigger: TGTCCCAGAGCATTTGAGGCTGGCATCTGGTGGCCACAGACGAAATTTGGGCAGCCAGCAGCGGTGCCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp CTCTCGCAGCCGGGACTTCAGTGGCTGCTCTGGCAATaGCGGCGGGTAGGTGACTTTGTTTTTCAGGATGCC +
Preference number: 6 (lower is better)
Translates to: LSQPGLQWLLWQ*RRVGDFVFQDA
Trigger: GGCATCCTGAAAAACAAAGTCACCTACCCGCCGCCATTGCCAGAGCAGCCACTGAAGTCCCGGCTGCGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS CCA 72 bp ACAATCAGCCAGCTTCTCTCGCAGCCGGGACTTCAGTaGCTGCTCTGGCAATGGCGGCGGGTAGGTGACTTT +
Preference number: 6 (lower is better)
Translates to: TISQLLSQPGLQ*LLWQWRRVGDF
Trigger: AAAGTCACCTACCCGCCGCCATTGCCAGAGCAGCCACTGAAGTCCCGGCTGCGAGAGAAGCTGGCTGATTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS CAA 90 bp GAGGCACATGGGTCCTCCACGTCACAGCCGTCCTTCACCCTGACCTaGAGGGCGTCATTCATGTTCAGGGTGGCAATGTTGGTGGACGTC +
Preference number: 6 (lower is better)
Translates to: EAHGSSTSQPSFTLT*RASFMFRVAMLVDV
Trigger: GACGTCCACCAACATTGCCACCCTGAACATGAATGACGCCCTCAAGGTCAGGGTGAAGGACGGCTGTGACGTGGAGGACCCATGTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 72 bp GTCATTCTCGTCTTCTACCACTATGTGGACGGTGGCTaGGGCACTGAGTGGGCCTGGATTGCGACCCTGGTC +
Preference number: 6 (lower is better)
Translates to: VILVFYHYVDGG*GTEWAWIATLV
Trigger: GACCAGGGTCGCAATCCAGGCCCACTCAGTGCCTCAGCCACCGTCCACATAGTGGTAGAAGACGAGAATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 72 bp TGCGGAACTGTGGTACGGGATCCTCTAGCACATAGGTaGTGCGGGCGTTCTCACCCGTATCCTCATCCGTGG +
Preference number: 6 (lower is better)
Translates to: CGTVVRDPLAHR*CGRSHPYPHPW
Trigger: CCACGGATGAGGATACGGGTGAGAACGCCCGCATCACCTATGTGCTAGAGGATCCCGTACCACAGTTCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 72 bp GGCCTGAGCGAACGTTCACCTGGCAATGCTCCCCAGTaGAGTCCTCGAAGCACTCACAAGTGTAGCCACCCT +
Preference number: 6 (lower is better)
Translates to: GLSERSPGNAPQ*SPRSTHKCSHP
Trigger: AGGGTGGCTACACTTGTGAGTGCTTCGAGGACTTCACTGGGGAGCATTGCCAGGTGAACGTTCGCTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 72 bp CGAAAGGATTATCACAGCGGTTGCACTGACGGCCGATaGCACCAGGCTTGCAGGCACACTGCCCAGTGTCCA +
Preference number: 6 (lower is better)
Translates to: RKDYHSGCTDGR*HQACRHTAQCP
Trigger: TGGACACTGGGCAGTGTGCCTGCAAGCCTGGTGTCATCGGCCGTCAGTGCAACCGCTGTGATAATCCTTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 72 bp AGCCTCTCCGCCATCATCCTCGCTGTCCGATGTGTGTaGAGAGGCGTAGGAACTACTGTGCTCGTCCAGGGA +
Preference number: 6 (lower is better)
Translates to: SLSAIILAVRCV*RGVGTTVLVQG
Trigger: TCCCTGGACGAGCACAGTAGTTCCTACGCCTCTTCACACACATCGGACAGCGAGGATGATGGCGGAGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
CDS GCA 72 bp CTTCAGGTTGCCACTAACGATGCTGTAGTGTATGGCTaGATTCTGCCCCTGGTCCCGGTCAGTGGCCTGGAC +
Preference number: 6 (lower is better)
Translates to: LQVATNDAVVYG*ILPLVPVSGLD
Trigger: GTCCAGGCCACTGACCGGGACCAGGGGCAGAATGCAGCCATACACTACAGCATCGTTAGTGGCAACCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 72 bp CTGTGGGTGTTGGCATCTGTAACGTTGATAAAGACCTaGGCGGTGTGTGAACGCGTGCCATCGGACGCGGTC +
Preference number: 6 (lower is better)
Translates to: LWVLASVTLIKT*AVCERVPSDAV
Trigger: GACCGCGTCCGATGGCACGCGTTCACACACCGCGCAGGTCTTTATCAACGTTACAGATGCCAACACCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 72 bp GTTGTGGTCTCACCTGCCGAGAACGTGAGCTGCAGCTaGTCCTCCACAATCTCCAGGGCGATGAAGTCATGC +
Preference number: 6 (lower is better)
Translates to: VVVSPAENVSCS*SSTISRAMKSC
Trigger: GCATGACTTCATCGCCCTGGAGATTGTGGAGGAGCAGCTGCAGCTCACGTTCTCGGCAGGTGAGACCACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp CATGCTGTAAGATGCGGGCCAGAAGCTGGTAGGCCGTaGGCACATCATTGCCAAAGAGGGTGCTGTTCCCCT +
Preference number: 6 (lower is better)
Translates to: HAVRCGPEAGRP*AHHCQRGCCSP
Trigger: AGGGGAACAGCACCCTCTTTGGCAATGATGTGCGCACGGCCTACCAGCTTCTGGCCCGCATCTTACAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp ATGGTCACGCGCAGAGTGCAGAGAGCGGTGACACTGTaGATACCATCTGACACAGACACCTCCATGAGCGCC +
Preference number: 6 (lower is better)
Translates to: MVTRRVQRAVTL*IPSDTDTSMSA
Trigger: GGCGCTCATGGAGGTGTCTGTGTCAGATGGTATCCACAGTGTCACCGCTCTCTGCACTCTGCGCGTGACCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CCA 72 bp CAGCTTCTCTCGCAGCCGGGACTTCAGTGGCTGCTCTaGCAATGGCGGCGGGTAGGTGACTTTGTTTTTCAG +
Preference number: 6 (lower is better)
Translates to: QLLSQPGLQWLL*QWRRVGDFVFQ
Trigger: CTGAAAAACAAAGTCACCTACCCGCCGCCATTGCCAGAGCAGCCACTGAAGTCCCGGCTGCGAGAGAAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS CAA 72 bp TCCAGCTCCGCGCACACAGTAATCCAACCGGAGCTGTaGTGGATTTGGAAGGGGAAGTCTGGGGCAGAGGCA +
Preference number: 6 (lower is better)
Translates to: SSSAHTVIQPEL*WIWKGKSGAEA
Trigger: TGCCTCTGCCCCAGACTTCCCCTTCCAAATCCACAACAGCTCCGGTTGGATTACTGTGTGCGCGGAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CAA 72 bp GGGTCCTCCACGTCACAGCCGTCCTTCACCCTGACCTaGAGGGCGTCATTCATGTTCAGGGTGGCAATGTTG +
Preference number: 6 (lower is better)
Translates to: GSSTSQPSFTLT*RASFMFRVAML
Trigger: CAACATTGCCACCCTGAACATGAATGACGCCCTCAAGGTCAGGGTGAAGGACGGCTGTGACGTGGAGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CAA 90 bp TTCACCCTGACCTTGAGGGCGTCATTCATGTTCAGGGTGGCAATGTaGGTGGACGTCTCTCCCATCCTCACTCCCTGCATACAGCCTCGG +
Preference number: 6 (lower is better)
Translates to: FTLTLRASFMFRVAM*VDVSPILTPCIQPR
Trigger: CCGAGGCTGTATGCAGGGAGTGAGGATGGGAGAGACGTCCACCAACATTGCCACCCTGAACATGAATGACGCCCTCAAGGTCAGGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 72 bp GTCGTTAATGTCCAACACACTCACCTGAATTCCCACTaGCGCACTGAGGGGATTCGGGCTGCCCCGATCCAC +
Preference number: 6 (lower is better)
Translates to: VVNVQHTHLNSH*RTEGIRAAPIH
Trigger: GTGGATCGGGGCAGCCCGAATCCCCTCAGTGCGTCAGTGGGAATTCAGGTGAGTGTGTTGGACATTAACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 72 bp GCAGGCTCAGCTCGTTGCCTTGCAGAAAGGTGTAATTaGGGCTGTCAGATAGGTCAGGGTCGTGGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: AGSARCLAERCN*GCQIGQGRGLG
Trigger: TCCCAGCCCACGACCCTGACCTATCTGACAGCCTCAATTACACCTTTCTGCAAGGCAACGAGCTGAGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 72 bp CCATCGATGGACAGGTTTCGCATGCATCCCACAAACTaGCGGCTGTGCACGGGGAAGTCTTCTGGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: PSMDRFRMHPTN*RLCTGKSSGRL
Trigger: CAACCTGCCAGAAGACTTCCCCGTGCACAGCCGTCAGTTTGTGGGATGCATGCGAAACCTGTCCATCGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 72 bp CCGTTCTGGCATGAGGTCCCATCGCAGAAGTTCCTCTaGGAAGCACAGCCTGCCCTGGTACCATTGTTGGCA +
Preference number: 6 (lower is better)
Translates to: PFWHEVPSQKFL*EAQPALVPLLA
Trigger: TGCCAACAATGGTACCAGGGCAGGCTGTGCTTCTCAGAGGAACTTCTGCGATGGGACCTCATGCCAGAACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 72 bp AGGGGCCGTAGGAGACCTCAAAGCGGATGTAGCTGTTaGGAATCTGGAGATGGAGCCTGGAAGACGTGCCAG +
Preference number: 6 (lower is better)
Translates to: RGRRRPQSGCSC*ESGDGAWKTCQ
Trigger: CTGGCACGTCTTCCAGGCTCCATCTCCAGATTCTCAACAGCTACATCCGCTTTGAGGTCTCCTACGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 72 bp GCCAGGAGGGCGCTGCCTGTATGGACGACATCCTCATaGAAATTAGCCTCTCGGGTGGCTGCTAGGTCAAAG +
Preference number: 6 (lower is better)
Translates to: ARRALPVWTTSS*KLASRVAARSK
Trigger: CTTTGACCTAGCAGCCACCCGAGAGGCTAATTTTCATGAGGATGTCGTCCATACAGGCAGCGCCCTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 72 bp AGTGTTCAGGCAGCAGCTGACCCAGGGTCCGGTAAATaGCAACCAGGGCAACAGCAAACTGGCCAGGCTCAT +
Preference number: 6 (lower is better)
Translates to: SVQAAADPGSGK*QPGQQQTGQAH
Trigger: ATGAGCCTGGCCAGTTTGCTGTTGCCCTGGTTGTCATTTACCGGACCCTGGGTCAGCTGCTGCCTGAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp ACAAAGAGGGACAGCAGCGGGGACAGGAACTTCTCCTaGGACATGTTCTCCAGGCGGACAGTGATGCTGTTG +
Preference number: 6 (lower is better)
Translates to: TKRDSSGDRNFS*DMFSRRTVMLL
Trigger: CAACAGCATCACTGTCCGCCTGGAGAACATGTCGCAGGAGAAGTTCCTGTCCCCGCTGCTGTCCCTCTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 72 bp TGGGCCCAGTGTCGATGTTGCGCACTTCTGTCAGCATaGGGTAGACATGCAAGTTCTCCACAAGGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: WAQCRCCALLSA*GRHASSPQGSR
Trigger: CCTGGACCCTTGTGGAGAACTTGCATGTCTACCGCATGCTGACAGAAGTGCGCAACATCGACACTGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp CCACGTGGTAGAACCGCATGGGCCCAGTGTCGATGTTaGGCACTTCTGTCAGCATGCGGTAGACATGCAAGT +
Preference number: 6 (lower is better)
Translates to: PRGRTAWAQCRC*ALLSACGRHAS
Trigger: ACTTGCATGTCTACCGCATGCTGACAGAAGTGCGCAACATCGACACTGGGCCCATGCGGTTCTACCACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp GCTCACTTCACAGTAGGGATGCTCATACTCGCCGGGTaGGCACACACAGTGGAAGCCTCCAATGAGCAGGTT +
Preference number: 6 (lower is better)
Translates to: AHFTVGMLILAG*AHTVEASNEQV
Trigger: AACCTGCTCATTGGAGGCTTCCACTGTGTGTGCCCACCCGGCGAGTATGAGCATCCCTACTGTGAAGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp GCTGACCACCCTCCAGTCCCACCAGTGTCGAGGGAGTaGTTCCAGAATACACAGACAGGTTTGCTTCGTTCC +
Preference number: 6 (lower is better)
Translates to: ADHPPVPPVSRE*FQNTQTGLLRS
Trigger: GGAACGAAGCAAACCTGTCTGTGTATTCTGGAACCACTCCCTCGACACTGGTGGGACTGGAGGGTGGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp AGCTGGGAGAAGAACAGAGCCGTGATGAGGTTCTTGTaGATGCTGTGCAGGTTGGAGCGCAGTGTCCGAACG +
Preference number: 6 (lower is better)
Translates to: SWEKNRAVMRFL*MLCRLERSVRT
Trigger: CGTTCGGACACTGCGCTCCAACCTGCACAGCATCCACAAGAACCTCATCACGGCTCTGTTCTTCTCCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp TGTAACTCCACGCTGACCTTGGTCTCCACCTTCAGGTaGGGCTCAGTGTCCAACTCCTCACTGTCACTCCCA +
Preference number: 6 (lower is better)
Translates to: CNSTLTLVSTFR*GSVSNSSLSLP
Trigger: TGGGAGTGACAGTGAGGAGTTGGACACTGAGCCCCACCTGAAGGTGGAGACCAAGGTCAGCGTGGAGTTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239489.2
CDS CCA 72 bp CTCGGAGTCTTGATGGTAATGACACAGTCAGTGGCATaGACACCATCGCCAGAGCCAAGGGAGGATGTGCGG +
Preference number: 6 (lower is better)
Translates to: LGVLMVMTQSVA*TPSPEPREDVR
Trigger: CCGCACATCCTCCCTTGGCTCTGGCGATGGTGTCCATGCCACTGACTGTGTCATTACCATCAAGACTCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS CAA 72 bp GCTCTCACCAGTGAAGCGCTGAGGGTGTGGCATAGCTaGTTCACAGTTCTTTCCACCAAAGCGGAGCGGGCA +
Preference number: 6 (lower is better)
Translates to: ALTSEALRVWHS*FTVLSTKAERA
Trigger: TGCCCGCTCCGCTTTGGTGGAAAGAACTGTGAACAAGCTATGCCACACCCTCAGCGCTTCACTGGTGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CAA 72 bp TGCATACAGCCTCGGAAACCATGGCGGACAGAGACCTaGTCCTCGGTCACACCTCCGATGACAATAGTCCGC +
Preference number: 6 (lower is better)
Translates to: CIQPRKPWRTET*SSVTPPMTIVR
Trigger: GCGGACTATTGTCATCGGAGGTGTGACCGAGGACAAGGTCTCTGTCCGCCATGGTTTCCGAGGCTGTATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CAA 90 bp CTCACTCCCTGCATACAGCCTCGGAAACCATGGCGGACAGAGACCTaGTCCTCGGTCACACCTCCGATGACAATAGTCCGCATCTTCAAC +
Preference number: 6 (lower is better)
Translates to: LTPCIQPRKPWRTET*SSVTPPMTIVRIFN
Trigger: GTTGAAGATGCGGACTATTGTCATCGGAGGTGTGACCGAGGACAAGGTCTCTGTCCGCCATGGTTTCCGAGGCTGTATGCAGGGAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CAA 90 bp GAGAAGAACAGAGCCGTGATGAGGTTCTTGTGGATGCTGTGCAGGTaGGAGCGCAGTGTCCGAACGAGTGAGAGAAGGACAAAGGCCACC +
Preference number: 6 (lower is better)
Translates to: EKNRAVMRFLWMLCR*ERSVRTSERRTKAT
Trigger: GGTGGCCTTTGTCCTTCTCTCACTCGTTCGGACACTGCGCTCCAACCTGCACAGCATCCACAAGAACCTCATCACGGCTCTGTTCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CAA 90 bp AGGAGGATGGCGACCACTGTGCAGAGAAACGGGTTCTCAGTCTGGTaGATGCCGACCATGAAGATGAGCTGGGAGAAGAACAGAGCCGTG +
Preference number: 6 (lower is better)
Translates to: RRMATTVQRNGFSVW*MPTMKMSWEKNRAV
Trigger: CACGGCTCTGTTCTTCTCCCAGCTCATCTTCATGGTCGGCATCAACCAGACTGAGAACCCGTTTCTCTGCACAGTGGTCGCCATCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 72 bp ACTTCAGTGGCTGCTCTGGCAATGGCGGCGGGTAGGTaGCTTTGTTTTTCAGGATGCCTTTCCGCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: TSVAALAMAAGR*LCFSGCLSAAP
Trigger: AGGAGCAGCGGAAAGGCATCCTGAAAAACAAAGTCACCTACCCGCCGCCATTGCCAGAGCAGCCACTGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000016172.10
ENSMUST00000226204.3
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS CCA 72 bp TGTAGGCAGCCTGGTCCTCATAGTCCAGTTCCGTCATaGTATAGATGGTGCCAGTGTCCGGGTCAATGCGGA +
Preference number: 6 (lower is better)
Translates to: CRQPGPHSPVPS*YRWCQCPGQCG
Trigger: TCCGCATTGACCCGGACACTGGCACCATCTATACCATGACGGAACTGGACTATGAGGACCAGGCTGCCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CAA 72 bp AGAGCCGTGATGAGGTTCTTGTGGATGCTGTGCAGGTaGGAGCGCAGTGTCCGAACGAGTGAGAGAAGGACA +
Preference number: 6 (lower is better)
Translates to: RAVMRFLWMLCR*ERSVRTSERRT
Trigger: TGTCCTTCTCTCACTCGTTCGGACACTGCGCTCCAACCTGCACAGCATCCACAAGAACCTCATCACGGCTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CAA 72 bp ATGAGCTGGGAGAAGAACAGAGCCGTGATGAGGTTCTaGTGGATGCTGTGCAGGTTGGAGCGCAGTGTCCGA +
Preference number: 6 (lower is better)
Translates to: MSWEKNRAVMRF*WMLCRLERSVR
Trigger: TCGGACACTGCGCTCCAACCTGCACAGCATCCACAAGAACCTCATCACGGCTCTGTTCTTCTCCCAGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CAA 90 bp CCGTCCATTCTTGTCTCGTTGCGGTTCAGTTTCTCGTTCAAGGCCTaGAGGTCCACAAAGGAGCCAGAGGTGCAGTTGAAGAGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: PSILVSLRFSFSFKA*RSTKEPEVQLKSSG
Trigger: CCCAGAGCTCTTCAACTGCACCTCTGGCTCCTTTGTGGACCTCAAGGCCTTGAACGAGAAACTGAACCGCAACGAGACAAGAATGGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CAA 90 bp ACCATGAAGATGAGCTGGGAGAAGAACAGAGCCGTGATGAGGTTCTaGTGGATGCTGTGCAGGTTGGAGCGCAGTGTCCGAACGAGTGAG +
Preference number: 6 (lower is better)
Translates to: TMKMSWEKNRAVMRF*WMLCRLERSVRTSE
Trigger: CTCACTCGTTCGGACACTGCGCTCCAACCTGCACAGCATCCACAAGAACCTCATCACGGCTCTGTTCTTCTCCCAGCTCATCTTCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 72 bp TGTGATGGACACGCTGGCAGAGGAGCTCATGGCTGGTaGGCCATGGTCCACTGCTTCTACTCCAAAGCTATA +
Preference number: 6 (lower is better)
Translates to: CDGHAGRGAHGW*AMVHCFYSKAI
Trigger: TATAGCTTTGGAGTAGAAGCAGTGGACCATGGCTCACCAGCCATGAGCTCCTCTGCCAGCGTGTCCATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 72 bp GACACCCATTGTAGATCACTTCACAGCCGAGCGAGGTaGCCTCCGCGAAAGGATTATCACAGCGGTTGCACT +
Preference number: 6 (lower is better)
Translates to: DTHCRSLHSRAR*PPRKDYHSGCT
Trigger: AGTGCAACCGCTGTGATAATCCTTTCGCGGAGGTCACCTCGCTCGGCTGTGAAGTGATCTACAATGGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp AAGAACAGAGCCGTGATGAGGTTCTTGTGGATGCTGTaGAGGTTGGAGCGCAGTGTCCGAACGAGTGAGAGA +
Preference number: 6 (lower is better)
Translates to: KNRAVMRFLWML*RLERSVRTSER
Trigger: TCTCTCACTCGTTCGGACACTGCGCTCCAACCTGCACAGCATCCACAAGAACCTCATCACGGCTCTGTTCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp CAACACGACGCTCTCACCAGTGAAGCGCTGAGGGTGTaGCATAGCTTGTTCACAGTTCTTTCCACCAAAGCG +
Preference number: 6 (lower is better)
Translates to: QHDALTSEALRV*HSLFTVLSTKA
Trigger: CGCTTTGGTGGAAAGAACTGTGAACAAGCTATGCCACACCCTCAGCGCTTCACTGGTGAGAGCGTCGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp ATGGCGACCACTGTGCAGAGAAACGGGTTCTCAGTCTaGTTGATGCCGACCATGAAGATGAGCTGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: MATTVQRNGFSV*LMPTMKMSWEK
Trigger: CTTCTCCCAGCTCATCTTCATGGTCGGCATCAACCAGACTGAGAACCCGTTTCTCTGCACAGTGGTCGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp TACATTCATGGCCACCCCATTGAGATGCTCACGGCCTaGCTCCCTCCTCGGAGTCTTGATGGTAATGACACA +
Preference number: 6 (lower is better)
Translates to: YIHGHPIEMLTA*LPPRSLDGNDT
Trigger: TGTGTCATTACCATCAAGACTCCGAGGAGGGAGCCAGGCCGTGAGCATCTCAATGGGGTGGCCATGAATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
ENSMUST00000239396.2
ENSMUST00000239489.2
CDS CAA 72 bp ACCTTGAGGGCGTCATTCATGTTCAGGGTGGCAATGTaGGTGGACGTCTCTCCCATCCTCACTCCCTGCATA +
Preference number: 6 (lower is better)
Translates to: TLRASFMFRVAM*VDVSPILTPCI
Trigger: TATGCAGGGAGTGAGGATGGGAGAGACGTCCACCAACATTGCCACCCTGAACATGAATGACGCCCTCAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CAA 72 bp GCGACCACTGTGCAGAGAAACGGGTTCTCAGTCTGGTaGATGCCGACCATGAAGATGAGCTGGGAGAAGAAC +
Preference number: 6 (lower is better)
Translates to: ATTVQRNGFSVW*MPTMKMSWEKN
Trigger: GTTCTTCTCCCAGCTCATCTTCATGGTCGGCATCAACCAGACTGAGAACCCGTTTCTCTGCACAGTGGTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 72 bp TCACTCCACAACACGACGCTCTCACCAGTGAAGCGCTaGGGGTGTGGCATAGCTTGTTCACAGTTCTTTCCA +
Preference number: 6 (lower is better)
Translates to: SLHNTTLSPVKR*GCGIACSQFFP
Trigger: TGGAAAGAACTGTGAACAAGCTATGCCACACCCTCAGCGCTTCACTGGTGAGAGCGTCGTGTTGTGGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp GCCGCATCCTCATTCAGACGCAGCTCATACACAGGCTaGGTGAACATGGGGTCGTTATCATTTACATCCAGC +
Preference number: 6 (lower is better)
Translates to: AASSFRRSSYTG*VNMGSLSFTSS
Trigger: GCTGGATGTAAATGATAACGACCCCATGTTCACGCAGCCTGTGTATGAGCTGCGTCTGAATGAGGATGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS TCA 72 bp TCAGATAGGTCCTCTTCACATTTCGTGCCACGTTGCTaGAGTATGCCTCGAAATGCCTCAGTAGCTGCGCTG +
Preference number: 6 (lower is better)
Translates to: SDRSSSHFVPRC*SMPRNASVAAL
Trigger: CAGCGCAGCTACTGAGGCATTTCGAGGCATACTTCAGCAACGTGGCACGAAATGTGAAGAGGACCTATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS TCA 72 bp CCTGAATGTCCTCAAACCTTGGCACCTGGGCACCCGTaGAGTTCAGCTTGTCGAAGATGTCAACTGCAAGAA +
Preference number: 6 (lower is better)
Translates to: PECPQTLAPGHP*SSACRRCQLQE
Trigger: TTCTTGCAGTTGACATCTTCGACAAGCTGAACTTCACGGGTGCCCAGGTGCCAAGGTTTGAGGACATTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp AAATTTCGTCTGTGGCCACCAGATGCCAGCCTCAAATaGTCTGGGACACCCATTGTAGATCACTTCACAGCC +
Preference number: 6 (lower is better)
Translates to: KFRLWPPDASLK*SGTPIVDHFTA
Trigger: GGCTGTGAAGTGATCTACAATGGGTGTCCCAGAGCATTTGAGGCTGGCATCTGGTGGCCACAGACGAAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CCA 72 bp TTCTCAGTCTGGTTGATGCCGACCATGAAGATGAGCTaGGAGAAGAACAGAGCCGTGATGAGGTTCTTGTGG +
Preference number: 6 (lower is better)
Translates to: FSVWLMPTMKMS*EKNRAVMRFLW
Trigger: CCACAAGAACCTCATCACGGCTCTGTTCTTCTCCCAGCTCATCTTCATGGTCGGCATCAACCAGACTGAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp TCCAGGTTTTCTCGAATTCGCTCTCGATACTCAGACTaGTCAAAGACTGGGCTGTGGTCGTTAGTGTCACTG +
Preference number: 6 (lower is better)
Translates to: SRFSRIRSRYSD*SKTGLWSLVSL
Trigger: CAGTGACACTAACGACCACAGCCCAGTCTTTGAGCAGTCTGAGTATCGAGAGCGAATTCGAGAAAACCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS GCA 72 bp ACAAAGATGGGCGCATTGTCGTTCACATCTAACACCTaGACCGAGACCAGTCCTGAGGAATTAATGAGAGGA +
Preference number: 6 (lower is better)
Translates to: TKMGALSFTSNT*TETSPEELMRG
Trigger: TCCTCTCATTAATTCCTCAGGACTGGTCTCGGTGCAGGTGTTAGATGTGAACGACAATGCGCCCATCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000016172.10
CDS CAA 72 bp CAGGAAACCTTTGCAGACAGGACAAAGATGACTGTGTaGATGATTATAACCGTTCCGACAGGCCCAGCAAAG +
Preference number: 6 (lower is better)
Translates to: QETFADRTKMTV*MIITVPTGPAK
Trigger: CTTTGCTGGGCCTGTCGGAACGGTTATAATCATCAACACAGTCATCTTTGTCCTGTCTGCAAAGGTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CAA 90 bp CAGCATGGAGACAACCCCCTTTCTTTCATAATAATGGTGCTTTCTTaGGCAGGAAACCTTTGCAGACAGGACAAAGATGACTGTGTTGAT +
Preference number: 6 (lower is better)
Translates to: QHGDNPLSFIIMVLS*AGNLCRQDKDDCVD
Trigger: ATCAACACAGTCATCTTTGTCCTGTCTGCAAAGGTTTCCTGCCAAAGAAAGCACCATTATTATGAAAGAAAGGGGGTTGTCTCCATGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS CAA 72 bp GACAACCCCCTTTCTTTCATAATAATGGTGCTTTCTTaGGCAGGAAACCTTTGCAGACAGGACAAAGATGAC +
Preference number: 6 (lower is better)
Translates to: DNPLSFIIMVLS*AGNLCRQDKDD
Trigger: GTCATCTTTGTCCTGTCTGCAAAGGTTTCCTGCCAAAGAAAGCACCATTATTATGAAAGAAAGGGGGTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2
CDS GCA 72 bp TTCATAATAATGGTGCTTTCTTTGGCAGGAAACCTTTaGAGACAGGACAAAGATGACTGTGTTGATGATTAT +
Preference number: 6 (lower is better)
Translates to: FIIMVLSLAGNL*RQDKDDCVDDY
Trigger: ATAATCATCAACACAGTCATCTTTGTCCTGTCTGCAAAGGTTTCCTGCCAAAGAAAGCACCATTATTATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000016172.10
ENSMUST00000226840.2