Pregenerated sensors for CELF4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024268Ensembl transcript IDs: ENSMUST00000025117.14, ENSMUST00000115816.3, ENSMUST00000223704.2, ENSMUST00000224553.2, ENSMUST00000225477.2, ENSMUST00000225528.2
Found 387 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGCGGCGCTTCTGGCCGGAGCCTGCAGGTCTGGACAGTCCGGCCTaGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGA | + |
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Preference number: 1 (lower is better) Translates to: ERRFWPEPAGLDSPA*PLGTESDSTRGETG Trigger: TCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCGGCCAGAAGCGCCGCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR CCA 90 bp | GCTGGCAAAGCGAGAGGCGGCAGGACGCTTCCGGAGCGGCGCTTCTaGCCGGAGCCTGCAGGTCTGGACAGTCCGGCCTGGCCCTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: AGKARGGRTLPERRF*PEPAGLDSPAWPLG Trigger: CCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCGGCCAGAAGCGCCGCTCCGGAAGCGTCCTGCCGCCTCTCGCTTTGCCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
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| 3UTR CCA 90 bp | GCAGGACGCTTCCGGAGCGGCGCTTCTGGCCGGAGCCTGCAGGTCTaGACAGTCCGGCCTGGCCCTTGGGGACGGAGTCCGACAGCACTC | + |
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Preference number: 1 (lower is better) Translates to: AGRFRSGASGRSLQV*TVRPGPWGRSPTAL Trigger: GAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCGGCCAGAAGCGCCGCTCCGGAAGCGTCCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR CCA 90 bp | GCTTCTGGCCGGAGCCTGCAGGTCTGGACAGTCCGGCCTGGCCCTTaGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGC | + |
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Preference number: 1 (lower is better) Translates to: ASGRSLQVWTVRPGP*GRSPTALAGRRDRC Trigger: GCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCGGCCAGAAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR TCA 90 bp | TTCTCCCTGGCCTGGAAAGTCTCCGGAACAAGCACAGAAGGCGAGTaGAGCAGAGGTGAGAAGGGCAGAGAGAGCGCGCATGCGCGCGGC | + |
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Preference number: 1 (lower is better) Translates to: FSLAWKVSGTSTEGE*SRGEKGRESAHARG Trigger: GCCGCGCGCATGCGCGCTCTCTCTGCCCTTCTCACCTCTGCTTCACTCGCCTTCTGTGCTTGTTCCGGAGACTTTCCAGGCCAGGGAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
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| 3UTR TCA 90 bp | CATCCTGCCGGATGGGGGACTTTTCTCCACTCTCATGTGATTACGTaGACTTTATTCCTAGCTCAGCGCGAGACTGTGGTGGATTTGACT | + |
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Preference number: 1 (lower is better) Translates to: HPAGWGTFLHSHVIT*TLFLAQRETVVDLT Trigger: AGTCAAATCCACCACAGTCTCGCGCTGAGCTAGGAATAAAGTTCACGTAATCACATGAGAGTGGAGAAAAGTCCCCCATCCGGCAGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225528.2 |
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| 3UTR CAA 90 bp | CGCTTCTGGCCGGAGCCTGCAGGTCTGGACAGTCCGGCCTGGCCCTaGGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATG | + |
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Preference number: 2 (lower is better) Translates to: RFWPEPAGLDSPAWP*GTESDSTRGETGSM Trigger: CATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCGGCCAGAAGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR GCA 90 bp | GGTCTGGACAGTCCGGCCTGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGCAGCATCCTGCCCTGTaGGAGTCCTGGTCTCCCCCG | + |
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Preference number: 2 (lower is better) Translates to: GLDSPAWPLGTESDSTRGQHPAL*ESWSPP Trigger: CGGGGGAGACCAGGACTCGCACAGGGCAGGATGCTG...CCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCGCCCTGTGCGAGTCCTaGTCTCCCCCGGGGGACGCT | + |
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Preference number: 2 (lower is better) Translates to: WPLGTESDSTRGETGSMLALCES*SPPGDA Trigger: AGCGTCCCCCGGGGGAGACCAGGACTCGCACAGGGC...GAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR CCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCGCCCTGTGCGAGTCCTaGTCTCCCCCGGGGGACGCT | + |
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Preference number: 2 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPALCES*SPPGDA Trigger: AGCGTCCCCCGGGGGAGACCAGGACTCGCACAGGGC...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCTTGTACACTTGCCCCTaGCTGCCTCAGGCGCCTACG | + |
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Preference number: 2 (lower is better) Translates to: WPLGTESDSTRGETGSMLLYTCP*LPQAPT Trigger: CGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAA...GAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCAGCCCCAGGATCGGTTaGCAGCAGCATCTCCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: WPLGTESDSTRGETGSMLSPRIG*QQHLLL Trigger: TAGGAGGAGATGCTGCTGCCAACCGATCCTGGGGCT...GAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR GCA 90 bp | GGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCAGTCTAAAGCCCGTTCAGCATCCTaGCCTGTGCGAGTCCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: GDGVRQHSRGDGIDAQSKARSAS*PVRVLV Trigger: GACCAGGACTCGCACAGGGCAGGATGCTGAACGGGC...TTTAGACTGAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR GCA 90 bp | GGTCTGGACAGTCCGGCCTGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGTCACAACAATTACCTTaGCTTCGAAGTCCCCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: GLDSPAWPLGTESDSTRGSQQLP*LRSPLV Trigger: AACCAGGGGACTTCGAAGGCAAGGTAATTGTTGTGA...CCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR TCA 90 bp | GGTCTGGACAGTCCGGCCTGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGTTGATTGGTATTGGCTaGTATGTCAAAGGTGTCGTC | + |
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Preference number: 2 (lower is better) Translates to: GLDSPAWPLGTESDSTRGLIGIG*YVKGVV Trigger: GACGACACCTTTGACATATCAGCCAATACCAATCAA...CCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR GCA 90 bp | TGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCTTTTCCCCAAACACATaGCCTCTGCACTCCATAGAC | + |
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Preference number: 2 (lower is better) Translates to: WPLGTESDSTRGETGSMLFSPNT*PLHSID Trigger: GTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA...GAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR TCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCCTGGAGTCGTCAGCTTaGTTGGTATTGGCTGATATG | + |
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Preference number: 2 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPLESSA*LVLADM Trigger: CATATCAGCCAATACCAATCAAGCTGACGACTCCAG...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| 3UTR-3UTR GCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCTTTTCCCCAAACACATaGCCTCTGCACTCCATAGAC | + |
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Preference number: 2 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPFSPNT*PLHSID Trigger: GTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| 3UTR-3UTR CCA 90 bp | CGGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAAGCCCTGTGCGAGTCCTaGTCTCCCCCGGGGGACGCT | + |
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Preference number: 2 (lower is better) Translates to: RGDGIDAQSKLYRSTVLQALCES*SPPGDA Trigger: AGCGTCCCCCGGGGGAGACCAGGACTCGCACAGGGC...TTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR GCA 90 bp | GGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACGGCCTCCCAGCCGCCTaGTGGGGACTAGGCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: GETGSMLSLNSTEVQSYNGLPAA*WGLGPI Trigger: AATGGGGCCTAGTCCCCAGCAGGCGGCTGGGAGGCC...GTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR GCA 90 bp | CGGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACAGCATCCTGCCCTGTaGGAGTCCTGGTCTCCCCCG | + |
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Preference number: 2 (lower is better) Translates to: RGDGIDAQSKLYRSTVLQQHPAL*ESWSPP Trigger: CGGGGGAGACCAGGACTCGCACAGGGCAGGATGCTG...TTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR GCA 90 bp | GAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCGGCCTCCCAGCCGCCTaGTGGGGACTAGGCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: ETGSMLSLNSTEVQSYNIGLPAA*WGLGPI Trigger: AATGGGGCCTAGTCCCCAGCAGGCGGCTGGGAGGCC...GATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR CCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCGCCCTGTGCGAGTCCTaGTCTCCCCCGGGGGACGCT | + |
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Preference number: 2 (lower is better) Translates to: VYFSPNTCPLHSIDAILSALCES*SPPGDA Trigger: AGCGTCCCCCGGGGGAGACCAGGACTCGCACAGGGC...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 6 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 ENSMUST00000225528.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAACAGCATCCTGCCCTGTaGGAGTCCTGGTCTCCCCCG | + |
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Preference number: 2 (lower is better) Translates to: SPNTCPLHSIDAILSLKKQHPAL*ESWSPP Trigger: CGGGGGAGACCAGGACTCGCACAGGGCAGGATGCTG...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAGCCCTGTGCGAGTCCTaGTCTCCCCCGGGGGACGCT | + |
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Preference number: 2 (lower is better) Translates to: CHVYFSPNTCPLHSIDAIALCES*SPPGDA Trigger: AGCGTCCCCCGGGGGAGACCAGGACTCGCACAGGGC...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 6 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 ENSMUST00000225528.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGAGAAAGCGTCATCCAATAGTTACAGAAGGTTACAAGGAGTTTAGGGAGCGGAGCCTGCAGGTCTaGACAGTCCGGCCTGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SWRKRHPIVTEGYKEFRERSLQV*TVRPGP Trigger: AGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCG...CTCCCTAAACTCCTTGTAACCTTCTGTAACTATTGGATGACGCTTTCTCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
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| 3UTR-3UTR GCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAACAGCATCCTGCCCTGTaGGAGTCCTGGTCTCCCCCG | + |
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Preference number: 2 (lower is better) Translates to: FFPKHMPSALHRRYTFLEQHPAL*ESWSPP Trigger: CGGGGGAGACCAGGACTCGCACAGGGCAGGATGCTG...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAAGACTGTGGTGGATTTaGCTGGCCCTGTGCGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: FFPKHMPSALHRRYTFLERLWWI*LALCES Trigger: GGACTCGCACAGGGCCAGTCAAATCCACCACAGTCT...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225528.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGTGTGGTGGATTTGACTaGCCCTGTGCGAGTCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: FSPNTCPLHSIDAILSLKCGGFD*PCASPG Trigger: ACCAGGACTCGCACAGGGCCAGTCAAATCCACCACA...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225528.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGTTTTGTGTGTGTGTGTGTTGTCTAGTTGTTTGAAGATGAGAAGTTCCCAGTTGTACACTTGCCCCTaGCTGCCTCAGGCGCCTACG | + |
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Preference number: 2 (lower is better) Translates to: KVLCVCVLSSCLKMRSSQLYTCP*LPQAPT Trigger: CGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAA...CTGGGAACTTCTCATCTTCAAACAACTAGACAACACACACACACACAAAACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
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| 3UTR-3UTR TCA 90 bp | ACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCTGGCTGGAGTCGTCAGCTTaGTTGGTATTGGCTGATATG | + |
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Preference number: 2 (lower is better) Translates to: TGSMLSLNSTEVQSYNIWLESSA*LVLADM Trigger: CATATCAGCCAATACCAATCAAGCTGACGACTCCAG...CCAGATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR TCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGCTGGAGTCGTCAGCTTaGTTGGTATTGGCTGATATG | + |
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Preference number: 2 (lower is better) Translates to: FSPNTCPLHSIDAILSLKLESSA*LVLADM Trigger: CATATCAGCCAATACCAATCAAGCTGACGACTCCAG...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 ENSMUST00000225528.2 |
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| 3UTR-3UTR TCA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGCTGGAGTCGTCAGCTTaGTTGGTATTGGCTGATATG | + |
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Preference number: 2 (lower is better) Translates to: YFSPNTCPLHSIDAILSLLESSA*LVLADM Trigger: CATATCAGCCAATACCAATCAAGCTGACGACTCCAG...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 ENSMUST00000225528.2 |
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| 3UTR-3UTR TCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCCTGGAGTCGTCAGCTTaGTTGGTATTGGCTGATATG | + |
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Preference number: 2 (lower is better) Translates to: VYFSPNTCPLHSIDAILSLESSA*LVLADM Trigger: CATATCAGCCAATACCAATCAAGCTGACGACTCCAG...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 ENSMUST00000225528.2 |
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| 3UTR-3UTR TCA 90 bp | ACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCTGGCATTCCACCTCTAATTaGCAGAGCTACACATCTGCA | + |
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Preference number: 2 (lower is better) Translates to: TGSMLSLNSTEVQSYNIWHSTSN*QSYTSA Trigger: TGCAGATGTGTAGCTCTGTCAATTAGAGGTGGAATG...CCAGATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR TCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGTTGATTGGTATTGGCTaGTATGTCAAAGGTGTCGTC | + |
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Preference number: 2 (lower is better) Translates to: FSPNTCPLHSIDAILSLKLIGIG*YVKGVV Trigger: GACGACACCTTTGACATATCAGCCAATACCAATCAA...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 ENSMUST00000225528.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGCTTCCCCATCTGGGCTCACGTTATTTCATTTTAAAGTCGCGGGTTTTTTTGATTGGTATTGGCTaGTATGTCAAAGGTGTCGTC | + |
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Preference number: 2 (lower is better) Translates to: LQLPHLGSRYFILKSRVFLIGIG*YVKGVV Trigger: GACGACACCTTTGACATATCAGCCAATACCAATCAA...AAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAG 43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| 3UTR-3UTR TCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGATTGGTATTGGCTaGTATGTCAAAGGTGTCGTC | + |
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Preference number: 2 (lower is better) Translates to: VYFSPNTCPLHSIDAILSLIGIG*YVKGVV Trigger: GACGACACCTTTGACATATCAGCCAATACCAATCAA...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 ENSMUST00000225528.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATTTGATTGGTATTGGCTaGTATGTCAAAGGTGTCGTC | + |
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Preference number: 2 (lower is better) Translates to: MSCIFFPKHMPSALHRRYLIGIG*YVKGVV Trigger: GACGACACCTTTGACATATCAGCCAATACCAATCAA...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 ENSMUST00000225528.2 |
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| 3UTR-3UTR TCA 90 bp | GAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCACGCTATACTTTCCTTaGAGAAATGTTACAGTCACA | + |
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Preference number: 2 (lower is better) Translates to: ETGSMLSLNSTEVQSYNITLYFP*RNVTVT Trigger: TGTGACTGTAACATTTCTTCAAGGAAAGTATAGCGT...GATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| 3UTR-3UTR TCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAACGCTATACTTTCCTTaGAGAAATGTTACAGTCACA | + |
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Preference number: 2 (lower is better) Translates to: SPNTCPLHSIDAILSLKKTLYFP*RNVTVT Trigger: TGTGACTGTAACATTTCTTCAAGGAAAGTATAGCGT...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 ENSMUST00000225528.2 |
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| 3UTR-3UTR GCA 90 bp | GAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCACAGAGCTACACATCTaGAATAAAAAGTTTGGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: ETGSMLSLNSTEVQSYNITELHI*NKKFGP Trigger: AGGACCAAACTTTTTATTGCAGATGTGTAGCTCTGT...GATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| 3UTR CCA 72 bp | GGGCAGAGAGAGCGCGCATGCGCGCGGCTCCCAGGCTaGCAAAGCGAGAGGCGGCAGGACGCTTCCGGAGCG | + |
|
Preference number: 3 (lower is better) Translates to: GQRERACARLPG*QSERRQDASGA Trigger: CGCTCCGGAAGCGTCCTGCCGCCTCTCGCTTTGCCAGCCTGGGAGCCGCGCGCATGCGCGCTCTCTCTGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| 3UTR GCA 72 bp | CAGGACGCTTCCGGAGCGGCGCTTCTGGCCGGAGCCTaGAGGTCTGGACAGTCCGGCCTGGCCCTTGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: QDASGAALLAGA*RSGQSGLALGD Trigger: GTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCGGCCAGAAGCGCCGCTCCGGAAGCGTCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| 3UTR CCA 72 bp | CGGAGCCTGCAGGTCTGGACAGTCCGGCCTGGCCCTTaGGGACGGAGTCCGACAGCACTCGCGGGGAGACGG | + |
|
Preference number: 3 (lower is better) Translates to: RSLQVWTVRPGP*GRSPTALAGRR Trigger: CCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| 3UTR CCA 72 bp | TTCCGGAGCGGCGCTTCTGGCCGGAGCCTGCAGGTCTaGACAGTCCGGCCTGGCCCTTGGGGACGGAGTCCG | + |
|
Preference number: 3 (lower is better) Translates to: FRSGASGRSLQV*TVRPGPWGRSP Trigger: CGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCGGCCAGAAGCGCCGCTCCGGAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| 3UTR CCA 72 bp | TTCTGGCCGGAGCCTGCAGGTCTGGACAGTCCGGCCTaGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: FWPEPAGLDSPA*PLGTESDSTRG Trigger: CCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCGGCCAGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| 3UTR-3UTR CAA 90 bp | GGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACAAGCCCCAGGATCGGTaGGCAGCAGCATCTCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GETGSMLSLNSTEVQSYNKPQDR*AAASPP Trigger: AGGAGGAGATGCTGCTGCCAACCGATCCTGGGGCTT...GTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| 3UTR TCA 72 bp | CCCCTGGCCTCCAGATGGACATCAATGAGAAGCTCTTaGGGCAGAATGCAAAGCAAGTCTTCCCAAGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PLASRWTSMRSS*GRMQSKSSQGA Trigger: TGCACCTTGGGAAGACTTGCTTTGCATTCTGCCTCAAGAGCTTCTCATTGATGTCCATCTGGAGGCCAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| 3UTR TCA 72 bp | GGATGGGGGACTTTTCTCCACTCTCATGTGATTACGTaGACTTTATTCCTAGCTCAGCGCGAGACTGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GWGTFLHSHVIT*TLFLAQRETVV Trigger: CACCACAGTCTCGCGCTGAGCTAGGAATAAAGTTCACGTAATCACATGAGAGTGGAGAAAAGTCCCCCATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225528.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATGAGACTGTGGTGGATTaGACTGGCCCTGTGCGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: MSCIFFPKHMPSALHRRYETVVD*TGPVRV Trigger: GACTCGCACAGGGCCAGTCAAATCCACCACAGTCTC...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225528.2 |
||
| 3UTR CCA 72 bp | AGTCTAAACTCTACAGAAGTACAGTCCTACAACATCTaGGATTTTAGCATAATGCTAACTTCTATAAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLNSTEVQSYNI*DFSIMLTSIRF Trigger: AAACCTTATAGAAGTTAGCATTATGCTAAAATCCCAGATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGACAGTCCGGCCTGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGGGGGGTCGGCTGCGGTaGGGCTCTGTGCTGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLDSPAWPLGTESDSTRGGGRLR*GSVLGR Trigger: CCTACCCAGCACAGAGCCCCACCGCAGCCGACCCCC...CCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACC 72% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| 3UTR CAA 72 bp | CCGGAGCCTGCAGGTCTGGACAGTCCGGCCTGGCCCTaGGGGACGGAGTCCGACAGCACTCGCGGGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: PEPAGLDSPAWP*GTESDSTRGET Trigger: CGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCAGGCTCCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | GGTCTGGACAGTCCGGCCTGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGTCATATGCCCGGCGCTaGCCGGGCTGCTGCCTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLDSPAWPLGTESDSTRGSYARR*PGCCLA Trigger: GGCTAGGCAGCAGCCCGGGCAGCGCCGGGCATATGA...CCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | TGCAGGTCTGGACAGTCCGGCCTGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGCACCCCTTGCTGTTaGCGTCCGGCCCGCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CRSGQSGLALGDGVRQHSRTPCC*RPARAG Trigger: TCCTGCGCGGGCCGGACGGCAACAGCAAGGGGTGCG...CGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR TCA 90 bp | GCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGCATCTGCGCGACCGATGCCATaGGGGCTGCTTGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASGAYGREKPQDRLAAASARPMP*GLLAAA Trigger: TGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGC...AGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAAGGGCCGCCATCTGCTaGATTTGGGCGGCAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPASGAYGREKPQDRLAARAAIC*IWAAAK Trigger: CTTCGCTGCCGCCCAAATGCAGCAGATGGCGGCCCT...TGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCTTGAGGGCCGCCATCTaGTGCATTTGGGCGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: WPLGTESDSTRGETGSMLLRAAI*CIWAAA Trigger: CGCTGCCGCCCAAATGCAGCAGATGGCGGCCCTCAA...GAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | TGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCTGCGGTGGGGCTCTGTaGTGGGTAGGGGTGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: WPLGTESDSTRGETGSMLCGGAL*WVGVNA Trigger: GGCATTCACCCCTACCCAGCACAGAGCCCCACCGCA...GAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | TGCAGGTCTGGACAGTCCGGCCTGGCCCTTGGGGACGGAGTCCGACAGCACTCGGGTCCTTCATGGGAATaGTCGACGGGTTCCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CRSGQSGLALGDGVRQHSGPSWE*STGSPG Trigger: GCCCGGGGAACCCGTCGACCATTCCCATGAAGGACC...CGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCATCCGCAGGCTTCACCTaGATCGGCCGGTTCATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPASGAYGREKPQDRLAASAGFT*IGRFIP Trigger: CGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGA...TGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGACAGTCCGGCCTGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGGATGCTAGGCACAGCTaGTGCAGTGATGCCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLDSPAWPLGTESDSTRGDARHS*CSDAWR Trigger: CCTCCAGGCATCACTGCACCAGCTGTGCCTAGCATC...CCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR TCA 90 bp | TGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCCTAGCCCGTTGGTACTaGGGCTCGCGTTGTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WPLGTESDSTRGETGSMLLARWY*GSRCQP Trigger: AGGCTGACAACGCGAGCCTCAGTACCAACGGGCTAG...GAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR TCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCCTGGGCCTTCAGCGCTaGCTCACGCTCGCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPLGLQR*LTLAVG Trigger: ACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAG...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | TGCAGGTCTGGACAGTCCGGCCTGGCCCTTGGGGACGGAGTCCGACAGCACTCGGGATGGCCATGGGGTTaGACATGCCCATCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CRSGQSGLALGDGVRQHSGWPWG*TCPSGQ Trigger: CTGGCCAGATGGGCATGTTCAACCCCATGGCCATCC...CGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCACTTAATCCGTTCATATaGCCGGCGCTGCCCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPASGAYGREKPQDRLAALNPFI*PALPGL Trigger: CAGCCCGGGCAGCGCCGGGCATATGAACGGATTAAG...TGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGCATCTAGGGCCGCCATCTGCTaGATTTGGGCGGCAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASGAYGREKPQDRLAAASRAAIC*IWAAAK Trigger: CTTCGCTGCCGCCCAAATGCAGCAGATGGCGGCCCT...AGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCTGCGGTGGGGCTCTGTaGTGGGTAGGGGTGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPCGGAL*WVGVNA Trigger: GGCATTCACCCCTACCCAGCACAGAGCCCCACCGCA...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCTCCGCAGGCTTCACCTaGATCGGCCGGTTCATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPSAGFT*IGRFIP Trigger: CGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGA...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCGCCATCTGCTGCATTTaGGCGGCAGCGAAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPAICCI*AAAKAA Trigger: GGCTGCCTTCGCTGCCGCCCAAATGCAGCAGATGGC...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | GCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGCATCTGGATGGCCATGGGGTTaGACATGCCCATCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASGAYGREKPQDRLAAASGWPWG*TCPSGQ Trigger: CTGGCCAGATGGGCATGTTCAACCCCATGGCCATCC...AGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCGGATGGCCATGGGGTTaGACATGCCCATCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPGWPWG*TCPSGQ Trigger: CTGGCCAGATGGGCATGTTCAACCCCATGGCCATCC...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | GGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCAGTCTAAAGCGCGACCGATGCCATaGGGGCTGCTTGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GDGVRQHSRGDGIDAQSKARPMP*GLLAAA Trigger: TGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGC...TTTAGACTGAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCTGGCCAGCCATCTGCTaGATCCGTCGCATTGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPWPAIC*IRRIVR Trigger: GCGCACAATGCGACGGATGCAGCAGATGGCTGGCCA...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGGTCTGGACAGTCCGGCCTGGCCCTTGGGGACGGAGTCCGACAGCACTCGAGGGTAGGCAGGTCCTaGATACTGCTGCACTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CRSGQSGLALGDGVRQHSRVGRS*ILLHSS Trigger: GCTGGAGTGCAGCAGTATGCAGGACCTGCCTACCCT...CGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAAGGAGGCTCCAGGCATaGTCTGGCTGCCATGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPASGAYGREKPQDRLAARRLQA*SGCHVE Trigger: CTCTACATGGCAGCCAGACCATGCCTGGAGCCTCCT...TGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGGGAATCATTGGCGGTaGCTGAGGAAAGGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPASGAYGREKPQDRLAAGNHWR*LRKGLA Trigger: AGCCAGGCCTTTCCTCAGCCACCGCCAATGATTCCC...TGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCCCTCGAAGAGGGGCTTaGGGTCCTTCTCATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPPRRGA*GPSHPG Trigger: ACCTGGATGAGAAGGACCTCAAGCCCCTCTTCGAGG...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCCACGCTCGCAGTAGGTaGGGAAAGCGCAGCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPHARSR*GKRSLC Trigger: ACAAAGGCTGCGCTTTCCTCACCTACTGCGAGCGTG...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | GCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGCATCTCACGCTCGCAGTAGGTaGGGAAAGCGCAGCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASGAYGREKPQDRLAAASHARSR*GKRSLC Trigger: ACAAAGGCTGCGCTTTCCTCACCTACTGCGAGCGTG...AGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAATCTGGCCAGCCATCTaGTGCATCCGTCGCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPASGAYGREKPQDRLAAIWPAI*CIRRIV Trigger: CACAATGCGACGGATGCAGCAGATGGCTGGCCAGAT...TGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCATCTGGCCAGCCATCTaGTGCATCCGTCGCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: WPLGTESDSTRGETGSMLIWPAI*CIRRIV Trigger: CACAATGCGACGGATGCAGCAGATGGCTGGCCAGAT...GAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCCGATGCCATGAGGGCTaGTTGCTGCTGCATCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPRCHEG*LLLHQC Trigger: GCACTGATGCAGCAGCAAGCAGCCCTCATGGCATCG...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGCATCTCGATGCCATGAGGGCTaGTTGCTGCTGCATCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASGAYGREKPQDRLAAASRCHEG*LLLHQC Trigger: GCACTGATGCAGCAGCAAGCAGCCCTCATGGCATCG...AGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGGTCATAGGTGCGGCTaGCAGGCCATTCATGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPASGAYGREKPQDRLAAGHRCG*QAIHVE Trigger: CTCAACATGAATGGCCTGGCAGCCGCACCTATGACC...TGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGGTAGGCAGGTCCTaGATACTGCTGCACTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPRVGRS*ILLHSS Trigger: GCTGGAGTGCAGCAGTATGCAGGACCTGCCTACCCT...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCCAGCGAAGGCAGCCATaGGATTCAGGTAGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WPLGTESDSTRGETGSMLQRRQP*DSGSLL Trigger: AAGGAGGCTACCTGAATCCCATGGCTGCCTTCGCTG...GAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | GGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCAGTCTAAAGCCATCTGCTGCATTTaGGCGGCAGCGAAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDGVRQHSRGDGIDAQSKAICCI*AAAKAA Trigger: GGCTGCCTTCGCTGCCGCCCAAATGCAGCAGATGGC...TTTAGACTGAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCGATGCTAGGCACAGCTaGTGCAGTGATGCCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPDARHS*CSDAWR Trigger: CCTCCAGGCATCACTGCACCAGCTGTGCCTAGCATC...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCGGTGGGGCTCTGTGCTaGGTAGGGGTGAATGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPGGALC*VGVNAI Trigger: AATGGCATTCACCCCTACCCAGCACAGAGCCCCACC...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCTTGCTGGGGAATCATTaGCGGTGGCTGAGGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WPLGTESDSTRGETGSMLLLGNH*RWLRKG Trigger: GCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAA...GAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR TCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCATCATTGGCGGTGGCTaGGGAAAGGCCTGGCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPIIGGG*GKAWLI Trigger: GATTAGCCAGGCCTTTCCTCAGCCACCGCCAATGAT...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCAAAGGGAGGAACATCTaGATCAGCTCAGCGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WPLGTESDSTRGETGSMLKGRNI*ISSASP Trigger: TGGGGACGCTGAGCTGATGCAGATGTTCCTCCCTTT...GAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | TGCAGGTCTGGACAGTCCGGCCTGGCCCTTGGGGACGGAGTCCGACAGCACTCGGCTTGTGCCTCGGCATaGGAGGAGTACTTCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CRSGQSGLALGDGVRQHSACASA*EEYFTK Trigger: CTTTGTGAAGTACTCCTCCCATGCCGAGGCACAAGC...CGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCCAGCGAAGGCAGCCATaGGATTCAGGTAGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPQRRQP*DSGSLL Trigger: AAGGAGGCTACCTGAATCCCATGGCTGCCTTCGCTG...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAAGGGGTGAATGCCATTaGCAAACACAGCTTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPASGAYGREKPQDRLAARGECH*QTQLPQ Trigger: CTGCGGAAGCTGTGTTTGCCAATGGCATTCACCCCT...TGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCTTGCTGGGGAATCATTaGCGGTGGCTGAGGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPLLGNH*RWLRKG Trigger: GCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAA...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCCCTTCTCTCTGTTGCTaGGGAATCATTGGCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPPSLCC*GIIGGG Trigger: GCCACCGCCAATGATTCCCCAGCAACAGAGAGAAGG...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGGTCTGGACAGTCCGGCCTGGCCCTTGGGGACGGAGTCCGACAGCACTCGAGGTTTCGGGGGATCTaGCCAATGAACAGCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: CRSGQSGLALGDGVRQHSRFRGI*PMNSLM Trigger: CATCAAGCTGTTCATTGGGCAGATCCCCCGAAACCT...CGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGCATCTAAAGCGCAGCCTTTGTaGATGCCTGTGAACCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASGAYGREKPQDRLAAASKAQPL*MPVNLS Trigger: GGACAGGTTCACAGGCATGCACAAAGGCTGCGCTTT...AGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGCATCTAGGGGTGAATGCCATTaGCAAACACAGCTTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASGAYGREKPQDRLAAASRGECH*QTQLPQ Trigger: CTGCGGAAGCTGTGTTTGCCAATGGCATTCACCCCT...AGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCCTTGGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCACACTTTCGAGGAGATaGCATTACCGAAAGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WPLGTESDSTRGETGSMLTLSRR*HYRKGG Trigger: TCCTCCCTTTCGGTAATGTCATCTCCTCGAAAGTGT...GAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCCAAGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGCATCTCTGGGTAGGGGTGAATaGCATTGGCAAACACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASGAYGREKPQDRLAAASLGRGE*HWQTQL Trigger: AAGCTGTGTTTGCCAATGGCATTCACCCCTACCCAG...AGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | GGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCAGTCTAAACTTTGTGCATGCCTGTaGACCTGTCCTTCAGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: GDGVRQHSRGDGIDAQSKLCACL*TCPSEP Trigger: CGGTTCTGAAGGACAGGTTCACAGGCATGCACAAAG...TTTAGACTGAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| CDS-3UTR TCA 90 bp | CTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCACAGATTGTTGCTTGTTaGGCATACCCACGAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPASGAYGREKPQDRLAAQIVAC*AYPRRV Trigger: AACTCTTCGTGGGTATGCTCAACAAGCAACAATCTG...TGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACCGGCGCTGCCCGGGCTaGTGCCTAGCCCGTTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GETGSMLSLNSTEVQSYNRRCPG*CLARWY Trigger: GTACCAACGGGCTAGGCAGCAGCCCGGGCAGCGCCG...GTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGCATCTTCGTCCTCAGATTGTTaGTTGTTGAGCATACCCACG | + |
|
Preference number: 4 (lower is better) Translates to: ASGAYGREKPQDRLAAASSSSDC*LLSIPT Trigger: CGTGGGTATGCTCAACAAGCAACAATCTGAGGACGA...AGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| CDS-3UTR CCA 90 bp | GCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGCATCTCCAAAGCATTTACTTTaGTTAGTCGCCCGATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ASGAYGREKPQDRLAAASPKHLL*LVARST Trigger: TGTGGATCGGGCGACTAACCAAAGTAAATGCTTTGG...AGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGCGCACCCCTTGCTGTTaGCGTCCGGCCCGCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKRTPCC*RPARAG Trigger: TCCTGCGCGGGCCGGACGGCAACAGCAAGGGGTGCG...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS-3UTR CCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAGGGGGTCGGCTGCGGTaGGGCTCTGTGCTGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKGGRLR*GSVLGR Trigger: CCTACCCAGCACAGAGCCCCACCGCAGCCGACCCCC...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | CGGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACTGGGCCTTCAGCGCTaGCTCACGCTCGCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGDGIDAQSKLYRSTVLQLGLQR*LTLAVG Trigger: ACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAG...TTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGCGGCGCTGCCCGGGCTaGTGCCTAGCCCGTTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNTCPLHSIDAILSLRRCPG*CLARWY Trigger: GTACCAACGGGCTAGGCAGCAGCCCGGGCAGCGCCG...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGCGCACCCCTTGCTGTTaGCGTCCGGCCCGCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNTCPLHSIDAILSLRTPCC*RPARAG Trigger: TCCTGCGCGGGCCGGACGGCAACAGCAAGGGGTGCG...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | CTTCAGCTTCCCCATCTGGGCTCACGTTATTTCATTTTAAAGTCGCGGGTTTTTCGCACCCCTTGCTGTTaGCGTCCGGCCCGCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQLPHLGSRYFILKSRVFRTPCC*RPARAG Trigger: TCCTGCGCGGGCCGGACGGCAACAGCAAGGGGTGCG...AAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCGGGGGTCGGCTGCGGTaGGGCTCTGTGCTGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYFSPNTCPLHSIDAILSGGRLR*GSVLGR Trigger: CCTACCCAGCACAGAGCCCCACCGCAGCCGACCCCC...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGGGGGTCGGCTGCGGTaGGGCTCTGTGCTGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLEGGRLR*GSVLGR Trigger: CCTACCCAGCACAGAGCCCCACCGCAGCCGACCCCC...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGCGTCATCCAATAGTTACAGAAGGTTACAAGGAGTTTAGGGAGTCGTGTCGGCGCTGCCCGGGCTaGTGCCTAGCCCGTTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RKRHPIVTEGYKEFRESCRRCPG*CLARWY Trigger: GTACCAACGGGCTAGGCAGCAGCCCGGGCAGCGCCG...ACACGACTCCCTAAACTCCTTGTAACCTTCTGTAACTATTGGATGACGCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATCGGCGCTGCCCGGGCTaGTGCCTAGCCCGTTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MSCIFFPKHMPSALHRRYRRCPG*CLARWY Trigger: GTACCAACGGGCTAGGCAGCAGCCCGGGCAGCGCCG...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATCGCACCCCTTGCTGTTaGCGTCCGGCCCGCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MSCIFFPKHMPSALHRRYRTPCC*RPARAG Trigger: TCCTGCGCGGGCCGGACGGCAACAGCAAGGGGTGCG...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACGCTAGGCACAGCTGGTaGAGTGATGCCTGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GETGSMLSLNSTEVQSYNARHSW*SDAWRG Trigger: ACCCCTCCAGGCATCACTGCACCAGCTGTGCCTAGC...GTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | AGAAAGCGTCATCCAATAGTTACAGAAGGTTACAAGGAGTTTAGGGAGTCGTGTGGGGGTCGGCTGCGGTaGGGCTCTGTGCTGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKRHPIVTEGYKEFRESCGGRLR*GSVLGR Trigger: CCTACCCAGCACAGAGCCCCACCGCAGCCGACCCCC...ACACGACTCCCTAAACTCCTTGTAACCTTCTGTAACTATTGGATGACGCTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR TCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGCTGGGCCTTCAGCGCTaGCTCACGCTCGCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKLGLQR*LTLAVG Trigger: ACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAG...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGCGCGACCGATGCCATaGGGGCTGCTTGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLEARPMP*GLLAAA Trigger: TGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGC...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAAGGGGTGCTGCCACCTaGGGTTGGGGTCATAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKRGAAT*GWGHRC Trigger: GCACCTATGACCCCAACCTCAGGTGGCAGCACCCCT...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACGTTGATGGCGGCTTGTaGCTCGGCATGGGAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GETGSMLSLNSTEVQSYNVDGGL*LGMGGV Trigger: TACTCCTCCCATGCCGAGGCACAAGCCGCCATCAAC...GTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAATTGAGGGCCGCCATCTaGTGCATTTGGGCGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKLRAAI*CIWAAA Trigger: CGCTGCCGCCCAAATGCAGCAGATGGCGGCCCTCAA...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | ACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCTGGTGCGGTGGGGCTCTGTaGTGGGTAGGGGTGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGSMLSLNSTEVQSYNIWCGGAL*WVGVNA Trigger: GGCATTCACCCCTACCCAGCACAGAGCCCCACCGCA...CCAGATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGTGCGGTGGGGCTCTGTaGTGGGTAGGGGTGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKCGGAL*WVGVNA Trigger: GGCATTCACCCCTACCCAGCACAGAGCCCCACCGCA...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | GAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCGGTCCTTCATGGGAATaGTCGACGGGTTCCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ETGSMLSLNSTEVQSYNIGPSWE*STGSPG Trigger: GCCCGGGGAACCCGTCGACCATTCCCATGAAGGACC...GATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGGGTCCTTCATGGGAATaGTCGACGGGTTCCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKGPSWE*STGSPG Trigger: GCCCGGGGAACCCGTCGACCATTCCCATGAAGGACC...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAGGTCCTTCATGGGAATaGTCGACGGGTTCCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKGPSWE*STGSPG Trigger: GCCCGGGGAACCCGTCGACCATTCCCATGAAGGACC...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAATCGTGCAGCGCGCTCTaGGCCTTCAGCGCTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKSCSAL*AFSADS Trigger: TGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGA...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGTCGTGCAGCGCGCTCTaGGCCTTCAGCGCTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKSCSAL*AFSADS Trigger: TGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGA...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | GAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCTCCGCAGGCTTCACCTaGATCGGCCGGTTCATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ETGSMLSLNSTEVQSYNISAGFT*IGRFIP Trigger: CGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGA...GATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAATCCGCAGGCTTCACCTaGATCGGCCGGTTCATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKSAGFT*IGRFIP Trigger: CGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGA...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | GGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACAGGAGGCTCCAGGCATaGTCTGGCTGCCATGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GETGSMLSLNSTEVQSYNRRLQA*SGCHVE Trigger: CTCTACATGGCAGCCAGACCATGCCTGGAGCCTCCT...GTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | CGGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAAAGGAGGCTCCAGGCATaGTCTGGCTGCCATGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGDGIDAQSKLYRSTVLQRRLQA*SGCHVE Trigger: CTCTACATGGCAGCCAGACCATGCCTGGAGCCTCCT...TTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR TCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGCTAGCCCGTTGGTACTaGGGCTCGCGTTGTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKLARWY*GSRCQP Trigger: AGGCTGACAACGCGAGCCTCAGTACCAACGGGCTAG...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCCTGGGCCTTCAGCGCTaGCTCACGCTCGCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VYFSPNTCPLHSIDAILSLGLQR*LTLAVG Trigger: ACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAG...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAGGATGGCCATGGGGTTaGACATGCCCATCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKGWPWG*TCPSGQ Trigger: CTGGCCAGATGGGCATGTTCAACCCCATGGCCATCC...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAGCGCGACCGATGCCATaGGGGCTGCTTGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CHVYFSPNTCPLHSIDAIARPMP*GLLAAA Trigger: TGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGC...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATGCGCGACCGATGCCATaGGGGCTGCTTGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MSCIFFPKHMPSALHRRYARPMP*GLLAAA Trigger: TGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGC...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAATGGCCAGCCATCTGCTaGATCCGTCGCATTGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKWPAIC*IRRIVR Trigger: GCGCACAATGCGACGGATGCAGCAGATGGCTGGCCA...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCAGGGCCGCCATCTGCTaGATTTGGGCGGCAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VYFSPNTCPLHSIDAILSRAAIC*IWAAAK Trigger: CTTCGCTGCCGCCCAAATGCAGCAGATGGCGGCCCT...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAGGGCCGCCATCTGCTaGATTTGGGCGGCAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNTCPLHSIDAILSLRAAIC*IWAAAK Trigger: CTTCGCTGCCGCCCAAATGCAGCAGATGGCGGCCCT...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAATTGAGGGCCGCCATCTaGTGCATTTGGGCGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLELRAAI*CIWAAA Trigger: CGCTGCCGCCCAAATGCAGCAGATGGCGGCCCTCAA...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGGCTAGGCACAGCTGGTaGAGTGATGCCTGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKARHSW*SDAWRG Trigger: ACCCCTCCAGGCATCACTGCACCAGCTGTGCCTAGC...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGGTCCTTCATGGGAATaGTCGACGGGTTCCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLEGPSWE*STGSPG Trigger: GCCCGGGGAACCCGTCGACCATTCCCATGAAGGACC...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGTCGTGCAGCGCGCTCTaGGCCTTCAGCGCTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNTCPLHSIDAILSLSCSAL*AFSADS Trigger: TGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGA...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAATCGTGCAGCGCGCTCTaGGCCTTCAGCGCTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLESCSAL*AFSADS Trigger: TGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGA...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAATCCGCAGGCTTCACCTaGATCGGCCGGTTCATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLESAGFT*IGRFIP Trigger: CGGGATGAACCGGCCGATCCAGGTGAAGCCTGCGGA...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | CGGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACAGCGAAGGCAGCCATaGGATTCAGGTAGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGDGIDAQSKLYRSTVLQQRRQP*DSGSLL Trigger: AAGGAGGCTACCTGAATCCCATGGCTGCCTTCGCTG...TTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | CTTCAGCTTCCCCATCTGGGCTCACGTTATTTCATTTTAAAGTCGCGGGTTTTTGCCATCTGCTGCATTTaGGCGGCAGCGAAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQLPHLGSRYFILKSRVFAICCI*AAAKAA Trigger: GGCTGCCTTCGCTGCCGCCCAAATGCAGCAGATGGC...AAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAACTAGCCCGTTGGTACTaGGGCTCGCGTTGTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLELARWY*GSRCQP Trigger: AGGCTGACAACGCGAGCCTCAGTACCAACGGGCTAG...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGCCTCGAAGAGGGGCTTaGGGTCCTTCTCATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKPRRGA*GPSHPG Trigger: ACCTGGATGAGAAGGACCTCAAGCCCCTCTTCGAGG...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGCACGCTCGCAGTAGGTaGGGAAAGCGCAGCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKHARSR*GKRSLC Trigger: ACAAAGGCTGCGCTTTCCTCACCTACTGCGAGCGTG...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGGATGGCCATGGGGTTaGACATGCCCATCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLEGWPWG*TCPSGQ Trigger: CTGGCCAGATGGGCATGTTCAACCCCATGGCCATCC...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAAGGGGTGCTGCCACCTaGGGTTGGGGTCATAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CHVYFSPNTCPLHSIDAIRGAAT*GWGHRC Trigger: GCACCTATGACCCCAACCTCAGGTGGCAGCACCCCT...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGCTTAATCCGTTCATATaGCCGGCGCTGCCCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNTCPLHSIDAILSLLNPFI*PALPGL Trigger: CAGCCCGGGCAGCGCCGGGCATATGAACGGATTAAG...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAACTTAATCCGTTCATATaGCCGGCGCTGCCCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLELNPFI*PALPGL Trigger: CAGCCCGGGCAGCGCCGGGCATATGAACGGATTAAG...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGGTTGATGGCGGCTTGTaGCTCGGCATGGGAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKVDGGL*LGMGGV Trigger: TACTCCTCCCATGCCGAGGCACAAGCCGCCATCAAC...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTGGCCAGCCATCTGCTaGATCCGTCGCATTGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VYFSPNTCPLHSIDAILSWPAIC*IRRIVR Trigger: GCGCACAATGCGACGGATGCAGCAGATGGCTGGCCA...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAATGGCCAGCCATCTGCTaGATCCGTCGCATTGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLEWPAIC*IRRIVR Trigger: GCGCACAATGCGACGGATGCAGCAGATGGCTGGCCA...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | GAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCCGATGCCATGAGGGCTaGTTGCTGCTGCATCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ETGSMLSLNSTEVQSYNIRCHEG*LLLHQC Trigger: GCACTGATGCAGCAGCAAGCAGCCCTCATGGCATCG...GATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATATTGAGGGCCGCCATCTaGTGCATTTGGGCGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: CHVYFSPNTCPLHSIDAILRAAI*CIWAAA Trigger: CGCTGCCGCCCAAATGCAGCAGATGGCGGCCCTCAA...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | CTTCAGCTTCCCCATCTGGGCTCACGTTATTTCATTTTAAAGTCGCGGGTTTTTGCTAGGCACAGCTGGTaGAGTGATGCCTGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQLPHLGSRYFILKSRVFARHSW*SDAWRG Trigger: ACCCCTCCAGGCATCACTGCACCAGCTGTGCCTAGC...AAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATTGCGGTGGGGCTCTGTaGTGGGTAGGGGTGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: MSCIFFPKHMPSALHRRYCGGAL*WVGVNA Trigger: GGCATTCACCCCTACCCAGCACAGAGCCCCACCGCA...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAAGGGTAGGCAGGTCCTaGATACTGCTGCACTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKRVGRS*ILLHSS Trigger: GCTGGAGTGCAGCAGTATGCAGGACCTGCCTACCCT...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAGGAGGCTCCAGGCATaGTCTGGCTGCCATGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKRRLQA*SGCHVE Trigger: CTCTACATGGCAGCCAGACCATGCCTGGAGCCTCCT...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATGCCATCTGCTGCATTTaGGCGGCAGCGAAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MSCIFFPKHMPSALHRRYAICCI*AAAKAA Trigger: GGCTGCCTTCGCTGCCGCCCAAATGCAGCAGATGGC...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | ACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCTGGGGTGGGGCTCTGTGCTaGGTAGGGGTGAATGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TGSMLSLNSTEVQSYNIWGGALC*VGVNAI Trigger: AATGGCATTCACCCCTACCCAGCACAGAGCCCCACC...CCAGATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAGGGAATCATTGGCGGTaGCTGAGGAAAGGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKGNHWR*LRKGLA Trigger: AGCCAGGCCTTTCCTCAGCCACCGCCAATGATTCCC...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAATCTTGTGAAGGGGGCTaGCGCAGGCAGCTACTACCT | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKSCEGG*RRQLLP Trigger: AGGTAGTAGCTGCCTGCGCCAGCCCCCTTCACAAGA...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000223704.2 ENSMUST00000224553.2 |
||
| CDS-3UTR TCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTAGCCCGTTGGTACTaGGGCTCGCGTTGTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CHVYFSPNTCPLHSIDAILARWY*GSRCQP Trigger: AGGCTGACAACGCGAGCCTCAGTACCAACGGGCTAG...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATCTAGCCCGTTGGTACTaGGGCTCGCGTTGTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MSCIFFPKHMPSALHRRYLARWY*GSRCQP Trigger: AGGCTGACAACGCGAGCCTCAGTACCAACGGGCTAG...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAACCTCGAAGAGGGGCTTaGGGTCCTTCTCATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLEPRRGA*GPSHPG Trigger: ACCTGGATGAGAAGGACCTCAAGCCCCTCTTCGAGG...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | GAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCATCATTGGCGGTGGCTaGGGAAAGGCCTGGCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: ETGSMLSLNSTEVQSYNIIIGGG*GKAWLI Trigger: GATTAGCCAGGCCTTTCCTCAGCCACCGCCAATGAT...GATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR TCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAATCATTGGCGGTGGCTaGGGAAAGGCCTGGCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKIIGGG*GKAWLI Trigger: GATTAGCCAGGCCTTTCCTCAGCCACCGCCAATGAT...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTAATCCGTTCATATaGCCGGCGCTGCCCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CHVYFSPNTCPLHSIDAILNPFI*PALPGL Trigger: CAGCCCGGGCAGCGCCGGGCATATGAACGGATTAAG...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACAGGTTTCGGGGGATCTaGCCAATGAACAGCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GETGSMLSLNSTEVQSYNRFRGI*PMNSLM Trigger: CATCAAGCTGTTCATTGGGCAGATCCCCCGAAACCT...GTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGGTTGATGGCGGCTTGTaGCTCGGCATGGGAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNTCPLHSIDAILSLVDGGL*LGMGGV Trigger: TACTCCTCCCATGCCGAGGCACAAGCCGCCATCAAC...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCGTTGATGGCGGCTTGTaGCTCGGCATGGGAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VYFSPNTCPLHSIDAILSVDGGL*LGMGGV Trigger: TACTCCTCCCATGCCGAGGCACAAGCCGCCATCAAC...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATTGGCCAGCCATCTGCTaGATCCGTCGCATTGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: MSCIFFPKHMPSALHRRYWPAIC*IRRIVR Trigger: GCGCACAATGCGACGGATGCAGCAGATGGCTGGCCA...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTAGGGCTAAGCTGGAGAAAGCGTCATCCAATAGTTACAGAAGGTTACAGGGCCGCCATCTGCTaGATTTGGGCGGCAGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LYLGLSWRKRHPIVTEGYRAAIC*IWAAAK Trigger: CTTCGCTGCCGCCCAAATGCAGCAGATGGCGGCCCT...GTAACCTTCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGGGTCATAGGTGCGGCTaGCAGGCCATTCATGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKGHRCG*QAIHVE Trigger: CTCAACATGAATGGCCTGGCAGCCGCACCTATGACC...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAGCTAGGCACAGCTGGTaGAGTGATGCCTGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CHVYFSPNTCPLHSIDAIARHSW*SDAWRG Trigger: ACCCCTCCAGGCATCACTGCACCAGCTGTGCCTAGC...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | GAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCGGGTTCCCCGGGCTGTaGCTTAATCCGTTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: ETGSMLSLNSTEVQSYNIGFPGL*LNPFIC Trigger: GCATATGAACGGATTAAGCCACAGCCCGGGGAACCC...GATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | ACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCTGGGGGTTCCCCGGGCTGTaGCTTAATCCGTTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: TGSMLSLNSTEVQSYNIWGFPGL*LNPFIC Trigger: GCATATGAACGGATTAAGCCACAGCCCGGGGAACCC...CCAGATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGGGGTTCCCCGGGCTGTaGCTTAATCCGTTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKGFPGL*LNPFIC Trigger: GCATATGAACGGATTAAGCCACAGCCCGGGGAACCC...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGCATCGTGGTCCTTCATaGGAATGGTCGACGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKHRGPS*EWSTGS Trigger: GGAACCCGTCGACCATTCCCATGAAGGACCACGATG...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAACATCGTGGTCCTTCATaGGAATGGTCGACGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKHRGPS*EWSTGS Trigger: GGAACCCGTCGACCATTCCCATGAAGGACCACGATG...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAGGAGGCTCCAGGCATaGTCTGGCTGCCATGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNTCPLHSIDAILSLRRLQA*SGCHVE Trigger: CTCTACATGGCAGCCAGACCATGCCTGGAGCCTCCT...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGCAGCGAAGGCAGCCATaGGATTCAGGTAGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKQRRQP*DSGSLL Trigger: AAGGAGGCTACCTGAATCCCATGGCTGCCTTCGCTG...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGCTTCCCCATCTGGGCTCACGTTATTTCATTTTAAAGTCGCGGGTTTTTGATGCTAGGCACAGCTaGTGCAGTGATGCCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQLPHLGSRYFILKSRVFDARHS*CSDAWR Trigger: CCTCCAGGCATCACTGCACCAGCTGTGCCTAGCATC...AAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCGATGCTAGGCACAGCTaGTGCAGTGATGCCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYFSPNTCPLHSIDAILSDARHS*CSDAWR Trigger: CCTCCAGGCATCACTGCACCAGCTGTGCCTAGCATC...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGGTGGGGCTCTGTGCTaGGTAGGGGTGAATGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLEGGALC*VGVNAI Trigger: AATGGCATTCACCCCTACCCAGCACAGAGCCCCACC...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGCTTCCCCATCTGGGCTCACGTTATTTCATTTTAAAGTCGCGGGTTTTTGGGAATCATTGGCGGTaGCTGAGGAAAGGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQLPHLGSRYFILKSRVFGNHWR*LRKGLA Trigger: AGCCAGGCCTTTCCTCAGCCACCGCCAATGATTCCC...AAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | GAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCTTGCTGGGGAATCATTaGCGGTGGCTGAGGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ETGSMLSLNSTEVQSYNILLGNH*RWLRKG Trigger: GCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAA...GATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGCCTTCTCTCTGTTGCTaGGGAATCATTGGCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKPSLCC*GIIGGG Trigger: GCCACCGCCAATGATTCCCCAGCAACAGAGAGAAGG...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAACCTTCTCTCTGTTGCTaGGGAATCATTGGCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKPSLCC*GIIGGG Trigger: GCCACCGCCAATGATTCCCCAGCAACAGAGAGAAGG...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCCTATGTGAAGGGGGCTaGCGCAGGCAGCTACTACCT | + |
|
Preference number: 4 (lower is better) Translates to: VYFSPNTCPLHSIDAILSLCEGG*RRQLLP Trigger: AGGTAGTAGCTGCCTGCGCCAGCCCCCTTCACATAG...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000115816.3 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAACTATGTGAAGGGGGCTaGCGCAGGCAGCTACTACCT | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLELCEGG*RRQLLP Trigger: AGGTAGTAGCTGCCTGCGCCAGCCCCCTTCACATAG...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000115816.3 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTCTTGTGAAGGGGGCTaGCGCAGGCAGCTACTACCT | + |
|
Preference number: 4 (lower is better) Translates to: VYFSPNTCPLHSIDAILSSCEGG*RRQLLP Trigger: AGGTAGTAGCTGCCTGCGCCAGCCCCCTTCACAAGA...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000223704.2 ENSMUST00000224553.2 |
||
| CDS-3UTR TCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACCTCGAAGAGGGGCTTaGGGTCCTTCTCATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CHVYFSPNTCPLHSIDAIPRRGA*GPSHPG Trigger: ACCTGGATGAGAAGGACCTCAAGCCCCTCTTCGAGG...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATCCTCGAAGAGGGGCTTaGGGTCCTTCTCATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MSCIFFPKHMPSALHRRYPRRGA*GPSHPG Trigger: ACCTGGATGAGAAGGACCTCAAGCCCCTCTTCGAGG...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCATCATTGGCGGTGGCTaGGGAAAGGCCTGGCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: VYFSPNTCPLHSIDAILSIIGGG*GKAWLI Trigger: GATTAGCCAGGCCTTTCCTCAGCCACCGCCAATGAT...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | CGGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAAACACTTTCGAGGAGATaGCATTACCGAAAGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGDGIDAQSKLYRSTVLQTLSRR*HYRKGG Trigger: TCCTCCCTTTCGGTAATGTCATCTCCTCGAAAGTGT...TTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAGCGCAGCCTTTGTaGATGCCTGTGAACCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKKAQPL*MPVNLS Trigger: GGACAGGTTCACAGGCATGCACAAAGGCTGCGCTTT...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCATCTGGCCAGCCATCTaGTGCATCCGTCGCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VYFSPNTCPLHSIDAILSIWPAI*CIRRIV Trigger: CACAATGCGACGGATGCAGCAGATGGCTGGCCAGAT...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGATCTGGCCAGCCATCTaGTGCATCCGTCGCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNTCPLHSIDAILSLIWPAI*CIRRIV Trigger: CACAATGCGACGGATGCAGCAGATGGCTGGCCAGAT...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACGATGCCATGAGGGCTaGTTGCTGCTGCATCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CHVYFSPNTCPLHSIDAIRCHEG*LLLHQC Trigger: GCACTGATGCAGCAGCAAGCAGCCCTCATGGCATCG...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGGGTCATAGGTGCGGCTaGCAGGCCATTCATGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNTCPLHSIDAILSLGHRCG*QAIHVE Trigger: CTCAACATGAATGGCCTGGCAGCCGCACCTATGACC...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAGGGAGGAACATCTaGATCAGCTCAGCGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKKGRNI*ISSASP Trigger: TGGGGACGCTGAGCTGATGCAGATGTTCCTCCCTTT...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGGGTTCCCCGGGCTGTaGCTTAATCCGTTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLEGFPGL*LNPFIC Trigger: GCATATGAACGGATTAAGCCACAGCCCGGGGAACCC...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCCATCGTGGTCCTTCATaGGAATGGTCGACGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VYFSPNTCPLHSIDAILSHRGPS*EWSTGS Trigger: GGAACCCGTCGACCATTCCCATGAAGGACCACGATG...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | GAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCGCTTGTGCCTCGGCATaGGAGGAGTACTTCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ETGSMLSLNSTEVQSYNIACASA*EEYFTK Trigger: CTTTGTGAAGTACTCCTCCCATGCCGAGGCACAAGC...GATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAGGGGTGAATGCCATTaGCAAACACAGCTTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKRGECH*QTQLPQ Trigger: CTGCGGAAGCTGTGTTTGCCAATGGCATTCACCCCT...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAAGGGGTGAATGCCATTaGCAAACACAGCTTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKRGECH*QTQLPQ Trigger: CTGCGGAAGCTGTGTTTGCCAATGGCATTCACCCCT...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAGGTGGGGCTCTGTGCTaGGTAGGGGTGAATGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: CHVYFSPNTCPLHSIDAIGGALC*VGVNAI Trigger: AATGGCATTCACCCCTACCCAGCACAGAGCCCCACC...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATGGGAATCATTGGCGGTaGCTGAGGAAAGGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MSCIFFPKHMPSALHRRYGNHWR*LRKGLA Trigger: AGCCAGGCCTTTCCTCAGCCACCGCCAATGATTCCC...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGCCTTCTCTCTGTTGCTaGGGAATCATTGGCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNTCPLHSIDAILSLPSLCC*GIIGGG Trigger: GCCACCGCCAATGATTCCCCAGCAACAGAGAGAAGG...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | AGCTGGAGAAAGCGTCATCCAATAGTTACAGAAGGTTACAAGGAGTTTAGGGAGCTTTGTGCATGCCTGTaGACCTGTCCTTCAGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: SWRKRHPIVTEGYKEFRELCACL*TCPSEP Trigger: CGGTTCTGAAGGACAGGTTCACAGGCATGCACAAAG...CTCCCTAAACTCCTTGTAACCTTCTGTAACTATTGGATGACGCTTTCTCCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR TCA 90 bp | CTTCAGCTTCCCCATCTGGGCTCACGTTATTTCATTTTAAAGTCGCGGGTTTTTCTTTGTGCATGCCTGTaGACCTGTCCTTCAGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: LQLPHLGSRYFILKSRVFLCACL*TCPSEP Trigger: CGGTTCTGAAGGACAGGTTCACAGGCATGCACAAAG...AAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | CTTTATTTAGGGCTAAGCTGGAGAAAGCGTCATCCAATAGTTACAGAAGGTTACCACGCTCGCAGTAGGTaGGGAAAGCGCAGCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LYLGLSWRKRHPIVTEGYHARSR*GKRSLC Trigger: ACAAAGGCTGCGCTTTCCTCACCTACTGCGAGCGTG...GTAACCTTCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAGGTTTCGGGGGATCTaGCCAATGAACAGCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKRFRGI*PMNSLM Trigger: CATCAAGCTGTTCATTGGGCAGATCCCCCGAAACCT...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAAGGTTTCGGGGGATCTaGCCAATGAACAGCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKRFRGI*PMNSLM Trigger: CATCAAGCTGTTCATTGGGCAGATCCCCCGAAACCT...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | CTTCAGCTTCCCCATCTGGGCTCACGTTATTTCATTTTAAAGTCGCGGGTTTTTAAAGCGCAGCCTTTGTaGATGCCTGTGAACCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQLPHLGSRYFILKSRVFKAQPL*MPVNLS Trigger: GGACAGGTTCACAGGCATGCACAAAGGCTGCGCTTT...AAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAAAAGCGCAGCCTTTGTaGATGCCTGTGAACCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLEKAQPL*MPVNLS Trigger: GGACAGGTTCACAGGCATGCACAAAGGCTGCGCTTT...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATATCTGGCCAGCCATCTaGTGCATCCGTCGCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MSCIFFPKHMPSALHRRYIWPAI*CIRRIV Trigger: CACAATGCGACGGATGCAGCAGATGGCTGGCCAGAT...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATGGTCATAGGTGCGGCTaGCAGGCCATTCATGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MSCIFFPKHMPSALHRRYGHRCG*QAIHVE Trigger: CTCAACATGAATGGCCTGGCAGCCGCACCTATGACC...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAACTGGGTAGGGGTGAATaGCATTGGCAAACACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPNTCPLHSIDAILSLKKLGRGE*HWQTQL Trigger: AAGCTGTGTTTGCCAATGGCATTCACCCCTACCCAG...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAAAAGGGAGGAACATCTaGATCAGCTCAGCGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLEKGRNI*ISSASP Trigger: TGGGGACGCTGAGCTGATGCAGATGTTCCTCCCTTT...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAGGGTTCCCCGGGCTGTaGCTTAATCCGTTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: CHVYFSPNTCPLHSIDAIGFPGL*LNPFIC Trigger: GCATATGAACGGATTAAGCCACAGCCCGGGGAACCC...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATCATCGTGGTCCTTCATaGGAATGGTCGACGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MSCIFFPKHMPSALHRRYHRGPS*EWSTGS Trigger: GGAACCCGTCGACCATTCCCATGAAGGACCACGATG...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGCTTCCCCATCTGGGCTCACGTTATTTCATTTTAAAGTCGCGGGTTTTTGCTTGTGCCTCGGCATaGGAGGAGTACTTCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQLPHLGSRYFILKSRVFACASA*EEYFTK Trigger: CTTTGTGAAGTACTCCTCCCATGCCGAGGCACAAGC...AAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTAGGGCTAAGCTGGAGAAAGCGTCATCCAATAGTTACAGAAGGTTACGATGCTAGGCACAGCTaGTGCAGTGATGCCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYLGLSWRKRHPIVTEGYDARHS*CSDAWR Trigger: CCTCCAGGCATCACTGCACCAGCTGTGCCTAGCATC...GTAACCTTCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAGGGGTGAATGCCATTaGCAAACACAGCTTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNTCPLHSIDAILSLRGECH*QTQLPQ Trigger: CTGCGGAAGCTGTGTTTGCCAATGGCATTCACCCCT...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTGCTTTATTTAGGGCTAAGCTGGAGAAAGCGTCATCCAATAGTTACAGAAGGTGGGGCTCTGTGCTaGGTAGGGGTGAATGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TVLYLGLSWRKRHPIVTEGGALC*VGVNAI Trigger: AATGGCATTCACCCCTACCCAGCACAGAGCCCCACC...TTCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAGCACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR CCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATATTGCTGGGGAATCATTaGCGGTGGCTGAGGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CHVYFSPNTCPLHSIDAILLGNH*RWLRKG Trigger: GCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAA...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATTTGCTGGGGAATCATTaGCGGTGGCTGAGGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MSCIFFPKHMPSALHRRYLLGNH*RWLRKG Trigger: GCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAA...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS-3UTR TCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTGTGCATGCCTGTaGACCTGTCCTTCAGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: CHVYFSPNTCPLHSIDAILCACL*TCPSEP Trigger: CGGTTCTGAAGGACAGGTTCACAGGCATGCACAAAG...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAAGGTTTCGGGGGATCTaGCCAATGAACAGCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FFPKHMPSALHRRYTFLERFRGI*PMNSLM Trigger: CATCAAGCTGTTCATTGGGCAGATCCCCCGAAACCT...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAAAAGCGCAGCCTTTGTaGATGCCTGTGAACCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CHVYFSPNTCPLHSIDAIKAQPL*MPVNLS Trigger: GGACAGGTTCACAGGCATGCACAAAGGCTGCGCTTT...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGTCGTCCTCAGATTGTTaGTTGTTGAGCATACCCACG | + |
|
Preference number: 4 (lower is better) Translates to: FSPNTCPLHSIDAILSLKSSSDC*LLSIPT Trigger: CGTGGGTATGCTCAACAAGCAACAATCTGAGGACGA...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTGCTTTATTTAGGGCTAAGCTGGAGAAAGCGTCATCCAATAGTTACAGAAGGTCATAGGTGCGGCTaGCAGGCCATTCATGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVLYLGLSWRKRHPIVTEGHRCG*QAIHVE Trigger: CTCAACATGAATGGCCTGGCAGCCGCACCTATGACC...TTCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAGCACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR GCA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGCTGGGTAGGGGTGAATaGCATTGGCAAACACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNTCPLHSIDAILSLLGRGE*HWQTQL Trigger: AAGCTGTGTTTGCCAATGGCATTCACCCCTACCCAG...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCCTGGGTAGGGGTGAATaGCATTGGCAAACACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VYFSPNTCPLHSIDAILSLGRGE*HWQTQL Trigger: AAGCTGTGTTTGCCAATGGCATTCACCCCTACCCAG...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | CTTCAGCTTCCCCATCTGGGCTCACGTTATTTCATTTTAAAGTCGCGGGTTTTTCTGGGTAGGGGTGAATaGCATTGGCAAACACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQLPHLGSRYFILKSRVFLGRGE*HWQTQL Trigger: AAGCTGTGTTTGCCAATGGCATTCACCCCTACCCAG...AAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAAAGGGAGGAACATCTaGATCAGCTCAGCGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MSCIFFPKHMPSALHRRYKGRNI*ISSASP Trigger: TGGGGACGCTGAGCTGATGCAGATGTTCCTCCCTTT...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAGCTTGTGCCTCGGCATaGGAGGAGTACTTCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CHVYFSPNTCPLHSIDAIACASA*EEYFTK Trigger: CTTTGTGAAGTACTCCTCCCATGCCGAGGCACAAGC...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR GCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTCGTCCTCAGATTGTTaGTTGTTGAGCATACCCACG | + |
|
Preference number: 4 (lower is better) Translates to: VYFSPNTCPLHSIDAILSSSSDC*LLSIPT Trigger: CGTGGGTATGCTCAACAAGCAACAATCTGAGGACGA...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS-3UTR GCA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGTCGTCCTCAGATTGTTaGTTGTTGAGCATACCCACG | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNTCPLHSIDAILSLSSSDC*LLSIPT Trigger: CGTGGGTATGCTCAACAAGCAACAATCTGAGGACGA...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS-3UTR CCA 90 bp | GAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCCCAAAGCATTTACTTTaGTTAGTCGCCCGATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ETGSMLSLNSTEVQSYNIPKHLL*LVARST Trigger: TGTGGATCGGGCGACTAACCAAAGTAAATGCTTTGG...GATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR TCA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCCAGATTGTTGCTTGTTaGGCATACCCACGAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VYFSPNTCPLHSIDAILSQIVAC*AYPRRV Trigger: AACTCTTCGTGGGTATGCTCAACAAGCAACAATCTG...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGCAGATTGTTGCTTGTTaGGCATACCCACGAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YFSPNTCPLHSIDAILSLQIVAC*AYPRRV Trigger: AACTCTTCGTGGGTATGCTCAACAAGCAACAATCTG...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR TCA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACAGATTGTTGCTTGTTaGGCATACCCACGAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CHVYFSPNTCPLHSIDAIQIVAC*AYPRRV Trigger: AACTCTTCGTGGGTATGCTCAACAAGCAACAATCTG...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS-3UTR CAA 90 bp | CTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAAGCGTTGATGGCGGCTaGTGCCTCGGCATGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPASGAYGREKPQDRLAASVDGG*CLGMGG Trigger: TCCTCCCATGCCGAGGCACAAGCCGCCATCAACGCT...TGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| CDS-3UTR CAA 90 bp | GCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGCATCTCGCCATCTGCTGCATTaGGGCGGCAGCGAAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASGAYGREKPQDRLAAASRHLLH*GGSEGS Trigger: GCTGCCTTCGCTGCCGCCCAAATGCAGCAGATGGCG...AGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| CDS-3UTR CAA 90 bp | CTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGCCAGGCCATTCATGTaGAGGGCCGCCATCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPASGAYGREKPQDRLAAARPFM*RAAICC Trigger: GCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGC...TGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| CDS GCA 90 bp | GGAATGGTCGACGGGTTCCCCGGGCTGTGGCTTAATCCGTTCATATaGCCGGCGCTGCCCGGGCTGCTGCCTAGCCCGTTGGTACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GMVDGFPGLWLNPFI*PALPGLLPSPLVLR Trigger: CCTCAGTACCAACGGGCTAGGCAGCAGCCCGGGCAGCGCCGGGCATATGAACGGATTAAGCCACAGCCCGGGGAACCCGTCGACCATTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS-3UTR CAA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGCGTTGATGGCGGCTaGTGCCTCGGCATGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPSVDGG*CLGMGG Trigger: TCCTCCCATGCCGAGGCACAAGCCGCCATCAACGCT...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| CDS-3UTR CAA 90 bp | CTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCATGCCATGAGGGCTGCTaGCTGCTGCATCAGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPASGAYGREKPQDRLAACHEGC*LLHQCL Trigger: CAGGCACTGATGCAGCAGCAAGCAGCCCTCATGGCA...TGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| CDS CCA 90 bp | GCATCGTGGTCCTTCATGGGAATGGTCGACGGGTTCCCCGGGCTGTaGCTTAATCCGTTCATATGCCCGGCGCTGCCCGGGCTGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASWSFMGMVDGFPGL*LNPFICPALPGLLP Trigger: AGGCAGCAGCCCGGGCAGCGCCGGGCATATGAACGGATTAAGCCACAGCCCGGGGAACCCGTCGACCATTCCCATGAAGGACCACGATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS-3UTR CAA 90 bp | GGGGACGGAGTCCGACAGCACTCGCGGGGAGACGGGATCGATGCTCAGTCTAAACGCCATCTGCTGCATTaGGGCGGCAGCGAAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GDGVRQHSRGDGIDAQSKRHLLH*GGSEGS Trigger: GCTGCCTTCGCTGCCGCCCAAATGCAGCAGATGGCG...TTTAGACTGAGCATCGATCCCGTCTCCCCGCGAGTGCTGTCGGACTCCGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
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| CDS-3UTR CAA 90 bp | GCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGCATCTGGGCCCTTCTCTCTGTaGCTGGGGAATCATTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ASGAYGREKPQDRLAAASGPFSL*LGNHWR Trigger: CCGCCAATGATTCCCCAGCAACAGAGAGAAGGGCCC...AGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| CDS TCA 90 bp | TCATATGCCCGGCGCTGCCCGGGCTGCTGCCTAGCCCGTTGGTACTaGGGCTCGCGTTGTCAGCCTGTCCGTTTGCTAACGTGGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SYARRCPGCCLARWY*GSRCQPVRLLTWPS Trigger: AGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCGAGCCTCAGTACCAACGGGCTAGGCAGCAGCCCGGGCAGCGCCGGGCATATGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS GCA 90 bp | AGCGAAGGCAGCCATGGGATTCAGGTAGCCTCCTTGCGCGACCGATaGCATGAGGGCTGCTTGCTGCTGCATTGCCTGAGCATAGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SEGSHGIQVASLRDR*HEGCLLLHCLSIGA Trigger: GGCGCCTATGCTCAGGCAATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATGGCTGCCTTCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224553.2 |
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| CDS TCA 90 bp | AGGCAGCCATGGGATTCAGGTAGCCTCCTTGCGCGACCGATGCCATaGGGGCTGCTTGCTGCTGCATCAGTGCCTGAGCATAGGCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RQPWDSGSLLARPMP*GLLAAASVPEHRRH Trigger: ATGGCGCCTATGCTCAGGCACTGATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATGGCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| CDS TCA 90 bp | AGGCAGCCATGGGATTCAGGTAGCCTCCTTGCGCGACCGATGCCATaGGGGCTGCTTGCTGCTGCATTGCCTGAGCATAGGCGCCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: RQPWDSGSLLARPMP*GLLAAALPEHRRHR Trigger: CCTATGGCGCCTATGCTCAGGCAATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATGGCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224553.2 |
||
| CDS GCA 90 bp | CATGGGATTCAGGTAGCCTCCTTGCGCGACCGATGCCATGAGGGCTaGTTGCTGCTGCATCAGTGCCTGAGCATAGGCGCCATAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HGIQVASLRDRCHEG*LLLHQCLSIGAIGS Trigger: GGAGCCTATGGCGCCTATGCTCAGGCACTGATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| CDS GCA 90 bp | AGCGAAGGCAGCCATGGGATTCAGGTAGCCTCCTTGCGCGACCGATaGCATGAGGGCTGCTTGCTGCTGCATCAGTGCCTGAGCATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SEGSHGIQVASLRDR*HEGCLLLHQCLSIG Trigger: GCCTATGCTCAGGCACTGATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATGGCTGCCTTCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| CDS CCA 90 bp | GTCTGGCTGCCATGTAGAGCGTTGATGGCGGCTTGTGCCTCGGCATaGGAGGAGTACTTCACAAAGGCGCACCCCTTGCTGTTGCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VWLPCRALMAACASA*EEYFTKAHPLLLPS Trigger: GGACGGCAACAGCAAGGGGTGCGCCTTTGTGAAGTACTCCTCCCATGCCGAGGCACAAGCCGCCATCAACGCTCTACATGGCAGCCAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS-3UTR CAA 90 bp | TGCAGGTCTGGACAGTCCGGCCTGGCCCTTGGGGACGGAGTCCGACAGCACTCGGTCGTCCTCAGATTGTaGCTTGTTGAGCATACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CRSGQSGLALGDGVRQHSVVLRL*LVEHTH Trigger: GTGGGTATGCTCAACAAGCAACAATCTGAGGACGAC...CGAGTGCTGTCGGACTCCGTCCCCAAGGGCCAGGCCGGACTGTCCAGACCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | CTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGTCGTCCTCAGATTGTaGCTTGTTGAGCATACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPASGAYGREKPQDRLAAVVLRL*LVEHTH Trigger: GTGGGTATGCTCAACAAGCAACAATCTGAGGACGAC...TGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | CGGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAAGCGCACCCCTTGCTGTaGCCGTCCGGCCCGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGDGIDAQSKLYRSTVLQAHPLL*PSGPRR Trigger: CCTGCGCGGGCCGGACGGCAACAGCAAGGGGTGCGC...TTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | GCCTCAGGCGCCTACGGGCGGGAAAAGCCCCAGGATCGGTTGGCAGCAGCATCTCGCATTGTGCGCTCCTaGTCAGTGTCTGCAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASGAYGREKPQDRLAAASRIVRS*SVSANL Trigger: CAAGTTTGCAGACACTGACAAGGAGCGCACAATGCG...AGATGCTGCTGCCAACCGATCCTGGGGCTTTTCCCGCCCGTAGGCGCCTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS GCA 90 bp | CATGGGATTCAGGTAGCCTCCTTGCGCGACCGATGCCATGAGGGCTaGTTGCTGCTGCATTGCCTGAGCATAGGCGCCATAGGCTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: HGIQVASLRDRCHEG*LLLHCLSIGAIGSE Trigger: TTCGGAGCCTATGGCGCCTATGCTCAGGCAATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224553.2 |
||
| CDS-3UTR CAA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCGTCGTCCTCAGATTGTaGCTTGTTGAGCATACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPVVLRL*LVEHTH Trigger: GTGGGTATGCTCAACAAGCAACAATCTGAGGACGAC...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | CCATTGTACACTTGCCCCTGCCTGCCTCAGGCGCCTACGGGCGGGAAAAGCCCCCACGTCGTCCTCAGATaGTTGCTTGTTGAGCATACC | + |
|
Preference number: 5 (lower is better) Translates to: PLYTCPCLPQAPTGGKSPHVVLR*LLVEHT Trigger: GGTATGCTCAACAAGCAACAATCTGAGGACGACGTG...GGGGCTTTTCCCGCCCGTAGGCGCCTGAGGCAGGCAGGGGCAAGTGTACAATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGGCGCACCCCTTGCTGTaGCCGTCCGGCCCGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSPNTCPLHSIDAILSLKAHPLL*PSGPRR Trigger: CCTGCGCGGGCCGGACGGCAACAGCAAGGGGTGCGC...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCGCGCACCCCTTGCTGTaGCCGTCCGGCCCGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VYFSPNTCPLHSIDAILSAHPLL*PSGPRR Trigger: CCTGCGCGGGCCGGACGGCAACAGCAAGGGGTGCGC...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | CGGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAAACAAAGGCGCACCCCTaGCTGTTGCCGTCCGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RGDGIDAQSKLYRSTVLQTKAHP*LLPSGP Trigger: CGGGCCGGACGGCAACAGCAAGGGGTGCGCCTTTGT...TTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | AGAAAGCGTCATCCAATAGTTACAGAAGGTTACAAGGAGTTTAGGGAGTCGTGTGCGCACCCCTTGCTGTaGCCGTCCGGCCCGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKRHPIVTEGYKEFRESCAHPLL*PSGPRR Trigger: CCTGCGCGGGCCGGACGGCAACAGCAAGGGGTGCGC...ACACGACTCCCTAAACTCCTTGTAACCTTCTGTAACTATTGGATGACGCTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAGCGCACCCCTTGCTGTaGCCGTCCGGCCCGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CHVYFSPNTCPLHSIDAIAHPLL*PSGPRR Trigger: CCTGCGCGGGCCGGACGGCAACAGCAAGGGGTGCGC...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS TCA 90 bp | AGGCCTCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTTGCTTGTTaGGCATACCCACGAAGAGTTTTCTATCTCCTCGGCTCTCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RPRRGGARRPQIVAC*AYPRRVFYLLGSRC Trigger: ACAGCGAGAGCCGAGGAGATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025117.14 |
||
| CDS TCA 90 bp | AGGCCTCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTTGCTTGTTaGGCATACCCACGAAGAGTTTTCTATCTTGTGAAGGGGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPRRGGARRPQIVAC*AYPRRVFYLVKGAG Trigger: GCCAGCCCCCTTCACAAGATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGAGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000223704.2 ENSMUST00000224553.2 |
||
| CDS GCA 90 bp | TTCCCGAAGGCCTCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTTaGTTGTTGAGCATACCCACGAAGAGTTTTCTATCTCCTCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FPKASKRRRTSSSDC*LLSIPTKSFLSPRL Trigger: GAGCCGAGGAGATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGAGGCCTTCGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025117.14 |
||
| CDS GCA 90 bp | TTCCCGAAGGCCTCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTTaGTTGTTGAGCATACCCACGAAGAGTTTTCTATGTGAAGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPKASKRRRTSSSDC*LLSIPTKSFLCEGG Trigger: GCCCCCTTCACATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGAGGCCTTCGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115816.3 ENSMUST00000225477.2 |
||
| CDS CCA 90 bp | GAAGCTCACGAAGCCTTCTCTCTGTTGCTGGGGAATCATTGGCGGTaGCTGAGGAAAGGCCTGGCTAATCTGACCATAGGCAGCAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: EAHEAFSLLLGNHWR*LRKGLANLTIGSRV Trigger: TACCCTGCTGCCTATGGTCAGATTAGCCAGGCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAACAGAGAGAAGGCTTCGTGAGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224553.2 |
||
| CDS CCA 90 bp | GTTGTCGAAGCTCACGAAGCCTTCTCTCTGTTGCTGGGGAATCATTaGCGGTGGCTGAGGAAAGGCCTGGCTAATCTGACCATAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVEAHEAFSLLLGNH*RWLRKGLANLTIGS Trigger: GCTGCCTATGGTCAGATTAGCCAGGCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAACAGAGAGAAGGCTTCGTGAGCTTCGACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224553.2 |
||
| CDS-3UTR CAA 90 bp | CGGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAAGCCAGGCCATTCATGTaGAGGGCCGCCATCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGDGIDAQSKLYRSTVLQARPFM*RAAICC Trigger: GCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGC...TTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGACAAAGGCGCACCCCTaGCTGTTGCCGTCCGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: YFSPNTCPLHSIDAILSLTKAHP*LLPSGP Trigger: CGGGCCGGACGGCAACAGCAAGGGGTGCGCCTTTGT...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS GCA 90 bp | TTCCCGAAGGCCTCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTTaGTTGTTGAGCATACCCACGAAGAGTTTTCTATCTTGTGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FPKASKRRRTSSSDC*LLSIPTKSFLSCEG Trigger: CCCTTCACAAGATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGAGGCCTTCGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223704.2 ENSMUST00000224553.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGCTGCTGCCTAGCCCGTaGGTACTGAGGCTCGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSPNTCPLHSIDAILSLKLLPSP*VLRLAL Trigger: CAACGCGAGCCTCAGTACCAACGGGCTAGGCAGCAG...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAACAAAGGCGCACCCCTaGCTGTTGCCGTCCGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CHVYFSPNTCPLHSIDAITKAHP*LLPSGP Trigger: CGGGCCGGACGGCAACAGCAAGGGGTGCGCCTTTGT...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACAAAGGCGCACCCCTaGCTGTTGCCGTCCGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: MSCIFFPKHMPSALHRRYTKAHP*LLPSGP Trigger: CGGGCCGGACGGCAACAGCAAGGGGTGCGCCTTTGT...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAGCGTTGATGGCGGCTaGTGCCTCGGCATGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FSPNTCPLHSIDAILSLKSVDGG*CLGMGG Trigger: TCCTCCCATGCCGAGGCACAAGCCGCCATCAACGCT...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGGCCAGGCCATTCATGTaGAGGGCCGCCATCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSPNTCPLHSIDAILSLKARPFM*RAAICC Trigger: GCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGC...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAGCCAGGCCATTCATGTaGAGGGCCGCCATCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPNTCPLHSIDAILSLKKARPFM*RAAICC Trigger: GCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGC...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | CGGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAAGTTGCTGGGGAATCATaGGCGGTGGCTGAGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGDGIDAQSKLYRSTVLQVAGES*AVAEER Trigger: CCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAAC...TTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAACTGCTGCCTAGCCCGTaGGTACTGAGGCTCGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FFPKHMPSALHRRYTFLELLPSP*VLRLAL Trigger: CAACGCGAGCCTCAGTACCAACGGGCTAGGCAGCAG...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | GGGGAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACAGGAAAGCGCAGCCTTaGTGCATGCCTGTGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: GETGSMLSLNSTEVQSYNRKAQP*CMPVNL Trigger: CAGGTTCACAGGCATGCACAAAGGCTGCGCTTTCCT...GTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATCGCCATCTGCTGCATTaGGGCGGCAGCGAAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MSCIFFPKHMPSALHRRYRHLLH*GGSEGS Trigger: GCTGCCTTCGCTGCCGCCCAAATGCAGCAGATGGCG...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAGCGTTGATGGCGGCTaGTGCCTCGGCATGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: MSCIFFPKHMPSALHRRYSVDGG*CLGMGG Trigger: TCCTCCCATGCCGAGGCACAAGCCGCCATCAACGCT...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAAGCGTTGATGGCGGCTaGTGCCTCGGCATGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CHVYFSPNTCPLHSIDAISVDGG*CLGMGG Trigger: TCCTCCCATGCCGAGGCACAAGCCGCCATCAACGCT...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | GAGACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCGCTGCATCCGTCGCATaGTGCGCTCCTTGTCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ETGSMLSLNSTEVQSYNIAASVA*CAPCQC Trigger: ACACTGACAAGGAGCGCACAATGCGACGGATGCAGC...GATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGGCTGCATCCGTCGCATaGTGCGCTCCTTGTCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FSPNTCPLHSIDAILSLKAASVA*CAPCQC Trigger: ACACTGACAAGGAGCGCACAATGCGACGGATGCAGC...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAGCTGCATCCGTCGCATaGTGCGCTCCTTGTCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPNTCPLHSIDAILSLKKAASVA*CAPCQC Trigger: ACACTGACAAGGAGCGCACAATGCGACGGATGCAGC...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGTGCCATGAGGGCTGCTaGCTGCTGCATCAGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: YFSPNTCPLHSIDAILSLCHEGC*LLHQCL Trigger: CAGGCACTGATGCAGCAGCAAGCAGCCCTCATGGCA...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | ACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCTGGATTCAGGTAGCCTCCTaGCGCGACCGATGCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: TGSMLSLNSTEVQSYNIWIQVAS*RDRCHE Trigger: CTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAAT...CCAGATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAATTCAGGTAGCCTCCTaGCGCGACCGATGCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPNTCPLHSIDAILSLKKIQVAS*RDRCHE Trigger: CTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAAT...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGATTCAGGTAGCCTCCTaGCGCGACCGATGCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: FSPNTCPLHSIDAILSLKIQVAS*RDRCHE Trigger: CTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAAT...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTAGGGCTAAGCTGGAGAAAGCGTCATCCAATAGTTACAGAAGGTTACCGCCATCTGCTGCATTaGGGCGGCAGCGAAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYLGLSWRKRHPIVTEGYRHLLH*GGSEGS Trigger: GCTGCCTTCGCTGCCGCCCAAATGCAGCAGATGGCG...GTAACCTTCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | ACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCTGGGTTGCTGGGGAATCATaGGCGGTGGCTGAGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TGSMLSLNSTEVQSYNIWVAGES*AVAEER Trigger: CCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAAC...CCAGATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAGTTGCTGGGGAATCATaGGCGGTGGCTGAGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPNTCPLHSIDAILSLKKVAGES*AVAEER Trigger: CCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAAC...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGGGCCCTTCTCTCTGTaGCTGGGGAATCATTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: FFPKHMPSALHRRYTFLEGPFSL*LGNHWR Trigger: CCGCCAATGATTCCCCAGCAACAGAGAGAAGGGCCC...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGGAGAAAGCGTCATCCAATAGTTACAGAAGGTTACAAGGAGTTTAGGGAGGTACTGAGGCTCGCGTaGTCAGCCTGTCCGTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SWRKRHPIVTEGYKEFREVLRLA*SACPFA Trigger: AGCAAACGGACAGGCTGACAACGCGAGCCTCAGTAC...CTCCCTAAACTCCTTGTAACCTTCTGTAACTATTGGATGACGCTTTCTCCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTAGGGCTAAGCTGGAGAAAGCGTCATCCAATAGTTACAGAAGGTTACCTGCTGCCTAGCCCGTaGGTACTGAGGCTCGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LYLGLSWRKRHPIVTEGYLLPSP*VLRLAL Trigger: CAACGCGAGCCTCAGTACCAACGGGCTAGGCAGCAG...GTAACCTTCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAGGAAAGCGCAGCCTTaGTGCATGCCTGTGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: FSPNTCPLHSIDAILSLKRKAQP*CMPVNL Trigger: CAGGTTCACAGGCATGCACAAAGGCTGCGCTTTCCT...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAAGGAAAGCGCAGCCTTaGTGCATGCCTGTGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPNTCPLHSIDAILSLKKRKAQP*CMPVNL Trigger: CAGGTTCACAGGCATGCACAAAGGCTGCGCTTTCCT...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATTGCCATGAGGGCTGCTaGCTGCTGCATCAGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: MSCIFFPKHMPSALHRRYCHEGC*LLHQCL Trigger: CAGGCACTGATGCAGCAGCAAGCAGCCCTCATGGCA...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAGTACTGAGGCTCGCGTaGTCAGCCTGTCCGTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CHVYFSPNTCPLHSIDAIVLRLA*SACPFA Trigger: AGCAAACGGACAGGCTGACAACGCGAGCCTCAGTAC...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATGTACTGAGGCTCGCGTaGTCAGCCTGTCCGTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: MSCIFFPKHMPSALHRRYVLRLA*SACPFA Trigger: AGCAAACGGACAGGCTGACAACGCGAGCCTCAGTAC...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGCTTCCCCATCTGGGCTCACGTTATTTCATTTTAAAGTCGCGGGTTTTTAGGAAAGCGCAGCCTTaGTGCATGCCTGTGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQLPHLGSRYFILKSRVFRKAQP*CMPVNL Trigger: CAGGTTCACAGGCATGCACAAAGGCTGCGCTTTCCT...AAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | GTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCAGGAAAGCGCAGCCTTaGTGCATGCCTGTGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: VYFSPNTCPLHSIDAILSRKAQP*CMPVNL Trigger: CAGGTTCACAGGCATGCACAAAGGCTGCGCTTTCCT...GGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAGCTGCATCCGTCGCATaGTGCGCTCCTTGTCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CHVYFSPNTCPLHSIDAIAASVA*CAPCQC Trigger: ACACTGACAAGGAGCGCACAATGCGACGGATGCAGC...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATATTCAGGTAGCCTCCTaGCGCGACCGATGCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: MSCIFFPKHMPSALHRRYIQVAS*RDRCHE Trigger: CTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAAT...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATGTTGCTGGGGAATCATaGGCGGTGGCTGAGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: MSCIFFPKHMPSALHRRYVAGES*AVAEER Trigger: CCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAAC...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATAGTTGCTGGGGAATCATaGGCGGTGGCTGAGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CHVYFSPNTCPLHSIDAIVAGES*AVAEER Trigger: CCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAAC...TATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | ACGGGATCGATGCTCAGTCTAAACTCTACAGAAGTACAGTCCTACAACATCTGGGTCGTCCTCAGATTGTaGCTTGTTGAGCATACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TGSMLSLNSTEVQSYNIWVVLRL*LVEHTH Trigger: GTGGGTATGCTCAACAAGCAACAATCTGAGGACGAC...CCAGATGTTGTAGGACTGTACTTCTGTAGAGTTTAGACTGAGCATCGATCCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | TCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGAAAGTCGTCCTCAGATTGTaGCTTGTTGAGCATACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SPNTCPLHSIDAILSLKKVVLRL*LVEHTH Trigger: GTGGGTATGCTCAACAAGCAACAATCTGAGGACGAC...TTTCTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAAGCACGTCGTCCTCAGATaGTTGCTTGTTGAGCATACC | + |
|
Preference number: 5 (lower is better) Translates to: FSPNTCPLHSIDAILSLKHVVLR*LLVEHT Trigger: GGTATGCTCAACAAGCAACAATCTGAGGACGACGTG...CTTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGCGCATTGTGCGCTCCTaGTCAGTGTCTGCAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: YFSPNTCPLHSIDAILSLRIVRS*SVSANL Trigger: CAAGTTTGCAGACACTGACAAGGAGCGCACAATGCG...CAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAACGCATTGTGCGCTCCTaGTCAGTGTCTGCAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FFPKHMPSALHRRYTFLERIVRS*SVSANL Trigger: CAAGTTTGCAGACACTGACAAGGAGCGCACAATGCG...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATACTTTCCTTGAACACGTCGTCCTCAGATaGTTGCTTGTTGAGCATACC | + |
|
Preference number: 5 (lower is better) Translates to: FFPKHMPSALHRRYTFLEHVVLR*LLVEHT Trigger: GGTATGCTCAACAAGCAACAATCTGAGGACGACGTG...TTCAAGGAAAGTATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGCGTCATCCAATAGTTACAGAAGGTTACAAGGAGTTTAGGGAGTCGTGTCGCATTGTGCGCTCCTaGTCAGTGTCTGCAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RKRHPIVTEGYKEFRESCRIVRS*SVSANL Trigger: CAAGTTTGCAGACACTGACAAGGAGCGCACAATGCG...ACACGACTCCCTAAACTCCTTGTAACCTTCTGTAACTATTGGATGACGCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | CTTCAGCTTCCCCATCTGGGCTCACGTTATTTCATTTTAAAGTCGCGGGTTTTTGCCAAAGCATTTACTTaGGTTAGTCGCCCGATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LQLPHLGSRYFILKSRVFAKAFT*VSRPIH Trigger: GTGGATCGGGCGACTAACCAAAGTAAATGCTTTGGC...AAAAACCCGCGACTTTAAAATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | ATGTCATGTATATTTTTCCCCAAACACATGCCCTCTGCACTCCATAGACGCTATTGTCAGCCTGTCCGTTaGCTAACGTGGCCATCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: MSCIFFPKHMPSALHRRYCQPVR*LTWPSL Trigger: TAAAGATGGCCACGTTAGCAAACGGACAGGCTGACA...ATAGCGTCTATGGAGTGCAGAGGGCATGTGTTTGGGGAAAAATATACATGACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGCGTCATCCAATAGTTACAGAAGGTTACAAGGAGTTTAGGGAGTCGTGTGCCAAAGCATTTACTTaGGTTAGTCGCCCGATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RKRHPIVTEGYKEFRESCAKAFT*VSRPIH Trigger: GTGGATCGGGCGACTAACCAAAGTAAATGCTTTGGC...ACACGACTCCCTAAACTCCTTGTAACCTTCTGTAACTATTGGATGACGCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTAGGGCTAAGCTGGAGAAAGCGTCATCCAATAGTTACAGAAGGTTACTGTCAGCCTGTCCGTTaGCTAACGTGGCCATCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LYLGLSWRKRHPIVTEGYCQPVR*LTWPSL Trigger: TAAAGATGGCCACGTTAGCAAACGGACAGGCTGACA...GTAACCTTCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS-3UTR CAA 90 bp | ACTGTGCTTTATTTAGGGCTAAGCTGGAGAAAGCGTCATCCAATAGTTACAGAACACGTCGTCCTCAGATaGTTGCTTGTTGAGCATACC | + |
|
Preference number: 5 (lower is better) Translates to: TVLYLGLSWRKRHPIVTEHVVLR*LLVEHT Trigger: GGTATGCTCAACAAGCAACAATCTGAGGACGACGTG...TTCTGTAACTATTGGATGACGCTTTCTCCAGCTTAGCCCTAAATAAAGCACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115816.3 |
||
| CDS GCA 72 bp | GACGGGTTCCCCGGGCTGTGGCTTAATCCGTTCATATaGCCGGCGCTGCCCGGGCTGCTGCCTAGCCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: DGFPGLWLNPFI*PALPGLLPSPL Trigger: CAACGGGCTAGGCAGCAGCCCGGGCAGCGCCGGGCATATGAACGGATTAAGCCACAGCCCGGGGAACCCGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS TCA 72 bp | CGGCGCTGCCCGGGCTGCTGCCTAGCCCGTTGGTACTaGGGCTCGCGTTGTCAGCCTGTCCGTTTGCTAACG | + |
|
Preference number: 6 (lower is better) Translates to: RRCPGCCLARWY*GSRCQPVRLLT Trigger: CGTTAGCAAACGGACAGGCTGACAACGCGAGCCTCAGTACCAACGGGCTAGGCAGCAGCCCGGGCAGCGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS GCA 72 bp | GCGGCTGCCAGGCCATTCATGTTGAGGGCCGCCATCTaGTGCATTTGGGCGGCAGCGAAGGCAGCCATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AAARPFMLRAAI*CIWAAAKAAMG Trigger: TCCCATGGCTGCCTTCGCTGCCGCCCAAATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCAGCCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS CAA 72 bp | ATATGCCCGGCGCTGCCCGGGCTGCTGCCTAGCCCGTaGGTACTGAGGCTCGCGTTGTCAGCCTGTCCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ICPALPGLLPSP*VLRLALSACPF Trigger: AAACGGACAGGCTGACAACGCGAGCCTCAGTACCAACGGGCTAGGCAGCAGCCCGGGCAGCGCCGGGCATAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS CAA 90 bp | CCACCTGAGGTTGGGGTCATAGGTGCGGCTGCCAGGCCATTCATGTaGAGGGCCGCCATCTGCTGCATTTGGGCGGCAGCGAAGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPEVGVIGAAARPFM*RAAICCIWAAAKAA Trigger: GGCTGCCTTCGCTGCCGCCCAAATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCAGCCGCACCTATGACCCCAACCTCAGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS GCA 72 bp | CAGGTAGCCTCCTTGCGCGACCGATGCCATGAGGGCTaGTTGCTGCTGCATCAGTGCCTGAGCATAGGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: QVASLRDRCHEG*LLLHQCLSIGA Trigger: GGCGCCTATGCTCAGGCACTGATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS CCA 72 bp | TCCTTCATGGGAATGGTCGACGGGTTCCCCGGGCTGTaGCTTAATCCGTTCATATGCCCGGCGCTGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SFMGMVDGFPGL*LNPFICPALPG Trigger: CCCGGGCAGCGCCGGGCATATGAACGGATTAAGCCACAGCCCGGGGAACCCGTCGACCATTCCCATGAAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS CAA 72 bp | GGCAGCGAAGGCAGCCATGGGATTCAGGTAGCCTCCTaGCGCGACCGATGCCATGAGGGCTGCTTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSEGSHGIQVAS*RDRCHEGCLLL Trigger: CAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATGGCTGCCTTCGCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS CAA 72 bp | GTTGGGGTCATAGGTGCGGCTGCCAGGCCATTCATGTaGAGGGCCGCCATCTGCTGCATTTGGGCGGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: VGVIGAAARPFM*RAAICCIWAAA Trigger: CGCTGCCGCCCAAATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCAGCCGCACCTATGACCCCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS CAA 90 bp | AATCCGTTCATATGCCCGGCGCTGCCCGGGCTGCTGCCTAGCCCGTaGGTACTGAGGCTCGCGTTGTCAGCCTGTCCGTTTGCTAACGTG | + |
|
Preference number: 6 (lower is better) Translates to: NPFICPALPGLLPSP*VLRLALSACPFANV Trigger: CACGTTAGCAAACGGACAGGCTGACAACGCGAGCCTCAGTACCAACGGGCTAGGCAGCAGCCCGGGCAGCGCCGGGCATATGAACGGATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS CAA 90 bp | CATTTGGGCGGCAGCGAAGGCAGCCATGGGATTCAGGTAGCCTCCTaGCGCGACCGATGCCATGAGGGCTGCTTGCTGCTGCATCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: HLGGSEGSHGIQVAS*RDRCHEGCLLLHQC Trigger: GCACTGATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATGGCTGCCTTCGCTGCCGCCCAAATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
||
| CDS CAA 90 bp | TGCGGCTGCCAGGCCATTCATGTTGAGGGCCGCCATCTGCTGCATTaGGGCGGCAGCGAAGGCAGCCATGGGATTCAGGTAGCCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CGCQAIHVEGRHLLH*GGSEGSHGIQVASL Trigger: CAAGGAGGCTACCTGAATCCCATGGCTGCCTTCGCTGCCGCCCAAATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCAGCCGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS CAA 90 bp | GGGATTCAGGTAGCCTCCTTGCGCGACCGATGCCATGAGGGCTGCTaGCTGCTGCATTGCCTGAGCATAGGCGCCATAGGCTCCGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GIQVASLRDRCHEGC*LLHCLSIGAIGSEG Trigger: CCCTTCGGAGCCTATGGCGCCTATGCTCAGGCAATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224553.2 |
||
| CDS CAA 90 bp | CATTTGGGCGGCAGCGAAGGCAGCCATGGGATTCAGGTAGCCTCCTaGCGCGACCGATGCCATGAGGGCTGCTTGCTGCTGCATTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HLGGSEGSHGIQVAS*RDRCHEGCLLLHCL Trigger: CAGGCAATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATGGCTGCCTTCGCTGCCGCCCAAATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224553.2 |
||
| CDS GCA 72 bp | GCTGCCAGGCCATTCATGTTGAGGGCCGCCATCTGCTaGATTTGGGCGGCAGCGAAGGCAGCCATGGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: AARPFMLRAAIC*IWAAAKAAMGF Trigger: GAATCCCATGGCTGCCTTCGCTGCCGCCCAAATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS GCA 72 bp | CGCGACCGATGCCATGAGGGCTGCTTGCTGCTGCATTaGCTGAGCATAGGCGCCATAGGCTCCGAAGGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RDRCHEGCLLLH*LSIGAIGSEGD Trigger: ATCCCCTTCGGAGCCTATGGCGCCTATGCTCAGGCAATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224553.2 |
||
| CDS CCA 72 bp | CCATCTGCTGCATTTGGGCGGCAGCGAAGGCAGCCATaGGATTCAGGTAGCCTCCTTGCGCGACCGATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PSAAFGRQRRQP*DSGSLLARPMP Trigger: TGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATGGCTGCCTTCGCTGCCGCCCAAATGCAGCAGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
||
| CDS CAA 72 bp | GTAGCCTCCTTGCGCGACCGATGCCATGAGGGCTGCTaGCTGCTGCATTGCCTGAGCATAGGCGCCATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VASLRDRCHEGC*LLHCLSIGAIG Trigger: GCCTATGGCGCCTATGCTCAGGCAATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224553.2 |
||
| CDS CAA 90 bp | GGGATTCAGGTAGCCTCCTTGCGCGACCGATGCCATGAGGGCTGCTaGCTGCTGCATCAGTGCCTGAGCATAGGCGCCATAGGCTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: GIQVASLRDRCHEGC*LLHQCLSIGAIGSE Trigger: TTCGGAGCCTATGGCGCCTATGCTCAGGCACTGATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| CDS GCA 72 bp | AGCCATGGGATTCAGGTAGCCTCCTTGCGCGACCGATaGCATGAGGGCTGCTTGCTGCTGCATTGCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SHGIQVASLRDR*HEGCLLLHCLS Trigger: GCTCAGGCAATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTACCTGAATCCCATGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224553.2 |
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| CDS CAA 72 bp | GTAGCCTCCTTGCGCGACCGATGCCATGAGGGCTGCTaGCTGCTGCATCAGTGCCTGAGCATAGGCGCCATA | + |
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Preference number: 6 (lower is better) Translates to: VASLRDRCHEGC*LLHQCLSIGAI Trigger: TATGGCGCCTATGCTCAGGCACTGATGCAGCAGCAAGCAGCCCTCATGGCATCGGTCGCGCAAGGAGGCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| CDS CCA 72 bp | CCATGTAGAGCGTTGATGGCGGCTTGTGCCTCGGCATaGGAGGAGTACTTCACAAAGGCGCACCCCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: PCRALMAACASA*EEYFTKAHPLL Trigger: CAGCAAGGGGTGCGCCTTTGTGAAGTACTCCTCCCATGCCGAGGCACAAGCCGCCATCAACGCTCTACATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS CAA 72 bp | GGGCTGCTGCCTAGCCCGTTGGTACTGAGGCTCGCGTaGTCAGCCTGTCCGTTTGCTAACGTGGCCATCTTT | + |
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Preference number: 6 (lower is better) Translates to: GLLPSPLVLRLA*SACPFANVAIF Trigger: AAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCGAGCCTCAGTACCAACGGGCTAGGCAGCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS CAA 72 bp | CAGGCCATTCATGTTGAGGGCCGCCATCTGCTGCATTaGGGCGGCAGCGAAGGCAGCCATGGGATTCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: QAIHVEGRHLLH*GGSEGSHGIQV Trigger: TACCTGAATCCCATGGCTGCCTTCGCTGCCGCCCAAATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS CCA 72 bp | GGGCCCTTCTCTCTGTTGCTGGGGAATCATTGGCGGTaGCTGAGGAAAGGCCTGGCTAATCTGACCATAGGC | + |
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Preference number: 6 (lower is better) Translates to: GPFSLLLGNHWR*LRKGLANLTIG Trigger: GCCTATGGTCAGATTAGCCAGGCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAACAGAGAGAAGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000225477.2 |
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| CDS CCA 72 bp | AGCATACCCACGAAGAGTTTTCTATGTGAAGGGGGCTaGCGCAGGCAGCTACTACCTCCTCGGCTCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: SIPTKSFLCEGG*RRQLLPPRLSL Trigger: CAGCGAGAGCCGAGGAGGTAGTAGCTGCCTGCGCCAGCCCCCTTCACATAGAAAACTCTTCGTGGGTATGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115816.3 ENSMUST00000225477.2 |
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| CDS CAA 90 bp | CCGAAGGCCTCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTTGCTaGTTGAGCATACCCACGAAGAGTTTTCTATCTCCTCGGCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: PKASKRRRTSSSDCC*LSIPTKSFLSPRLS Trigger: CGAGAGCCGAGGAGATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGAGGCCTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025117.14 |
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| CDS CAA 90 bp | CCGAAGGCCTCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTTGCTaGTTGAGCATACCCACGAAGAGTTTTCTATGTGAAGGGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PKASKRRRTSSSDCC*LSIPTKSFLCEGGW Trigger: CCAGCCCCCTTCACATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGAGGCCTTCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115816.3 ENSMUST00000225477.2 |
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| CDS CCA 72 bp | ATACCCACGAAGAGTTTTCTATCTTGTGAAGGGGGCTaGCGCAGGCAGCTACTACCTCCTCGGCTCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: IPTKSFLSCEGG*RRQLLPPRLSL Trigger: CAGCGAGAGCCGAGGAGGTAGTAGCTGCCTGCGCCAGCCCCCTTCACAAGATAGAAAACTCTTCGTGGGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000223704.2 ENSMUST00000224553.2 |
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| CDS CCA 72 bp | GCTCACGAAGCCTTCTCTCTGTTGCTGGGGAATCATTaGCGGTGGCTGAGGAAAGGCCTGGCTAATCTGACC | + |
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Preference number: 6 (lower is better) Translates to: AHEAFSLLLGNH*RWLRKGLANLT Trigger: GGTCAGATTAGCCAGGCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAACAGAGAGAAGGCTTCGTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224553.2 |
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| CDS CAA 90 bp | GTTCCCGAAGGCCTCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTaGCTTGTTGAGCATACCCACGAAGAGTTTTCTATCTCCTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: VPEGLEEAAHVVLRL*LVEHTHEEFSISSA Trigger: AGCCGAGGAGATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGAGGCCTTCGGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025117.14 |
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| CDS CAA 90 bp | CCGAAGGCCTCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTTGCTaGTTGAGCATACCCACGAAGAGTTTTCTATCTTGTGAAGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: PKASKRRRTSSSDCC*LSIPTKSFLSCEGG Trigger: GCCCCCTTCACAAGATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGAGGCCTTCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000223704.2 ENSMUST00000224553.2 |
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| CDS CCA 72 bp | GAAGCCTTCTCTCTGTTGCTGGGGAATCATTGGCGGTaGCTGAGGAAAGGCCTGGCTAATCTGACCATAGGC | + |
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Preference number: 6 (lower is better) Translates to: EAFSLLLGNHWR*LRKGLANLTIG Trigger: GCCTATGGTCAGATTAGCCAGGCCTTTCCTCAGCCACCGCCAATGATTCCCCAGCAACAGAGAGAAGGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224553.2 |
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| CDS CAA 90 bp | GATGTTCCCGAAGGCCTCGAAGAGGCGGCGCACGTCGTCCTCAGATaGTTGCTTGTTGAGCATACCCACGAAGAGTTTTCTATCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: DVPEGLEEAAHVVLR*LLVEHTHEEFSISS Trigger: CGAGGAGATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGAGGCCTTCGGGAACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025117.14 |
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| CDS TCA 72 bp | AGAGGCGGCGCACGTCGTCCTCAGATTGTTGCTTGTTaGGCATACCCACGAAGAGTTTTCTATCTCCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: RGGARRPQIVAC*AYPRRVFYLLG Trigger: GCCGAGGAGATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025117.14 |
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| CDS CAA 72 bp | GGCCTCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTaGCTTGTTGAGCATACCCACGAAGAGTTTTCTATC | + |
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Preference number: 6 (lower is better) Translates to: GLEEAAHVVLRL*LVEHTHEEFSI Trigger: GATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025117.14 ENSMUST00000223704.2 ENSMUST00000224553.2 |
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| CDS CAA 72 bp | GAAGGCCTCGAAGAGGCGGCGCACGTCGTCCTCAGATaGTTGCTTGTTGAGCATACCCACGAAGAGTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: EGLEEAAHVVLR*LLVEHTHEEFS Trigger: AGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGAGGCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025117.14 ENSMUST00000115816.3 ENSMUST00000223704.2 ENSMUST00000224553.2 ENSMUST00000225477.2 |
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| CDS CAA 72 bp | GGCCTCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTaGCTTGTTGAGCATACCCACGAAGAGTTTTCTATG | + |
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Preference number: 6 (lower is better) Translates to: GLEEAAHVVLRL*LVEHTHEEFSM Trigger: CATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115816.3 ENSMUST00000225477.2 |
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| CDS TCA 72 bp | AGAGGCGGCGCACGTCGTCCTCAGATTGTTGCTTGTTaGGCATACCCACGAAGAGTTTTCTATGTGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: RGGARRPQIVAC*AYPRRVFYVKG Trigger: CCCCTTCACATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115816.3 ENSMUST00000225477.2 |
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| CDS GCA 72 bp | GCCTCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTTaGTTGTTGAGCATACCCACGAAGAGTTTTCTATCT | + |
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Preference number: 6 (lower is better) Translates to: ASKRRRTSSSDC*LLSIPTKSFLS Trigger: AGATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025117.14 ENSMUST00000223704.2 ENSMUST00000224553.2 |
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| CDS GCA 72 bp | GCCTCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTTaGTTGTTGAGCATACCCACGAAGAGTTTTCTATGT | + |
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Preference number: 6 (lower is better) Translates to: ASKRRRTSSSDC*LLSIPTKSFLC Trigger: ACATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115816.3 ENSMUST00000225477.2 |
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| CDS CAA 72 bp | TCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTTGCTaGTTGAGCATACCCACGAAGAGTTTTCTATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SKRRRTSSSDCC*LSIPTKSFLSP Trigger: AGGAGATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025117.14 |
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| CDS TCA 72 bp | AGAGGCGGCGCACGTCGTCCTCAGATTGTTGCTTGTTaGGCATACCCACGAAGAGTTTTCTATCTTGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: RGGARRPQIVAC*AYPRRVFYLVK Trigger: CTTCACAAGATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223704.2 ENSMUST00000224553.2 |
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| CDS CAA 72 bp | TCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTTGCTaGTTGAGCATACCCACGAAGAGTTTTCTATGTGAA | + |
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Preference number: 6 (lower is better) Translates to: SKRRRTSSSDCC*LSIPTKSFLCE Trigger: TTCACATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115816.3 ENSMUST00000225477.2 |
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| CDS CAA 72 bp | TCGAAGAGGCGGCGCACGTCGTCCTCAGATTGTTGCTaGTTGAGCATACCCACGAAGAGTTTTCTATCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SKRRRTSSSDCC*LSIPTKSFLSC Trigger: ACAAGATAGAAAACTCTTCGTGGGTATGCTCAACAAGCAACAATCTGAGGACGACGTGCGCCGCCTCTTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000223704.2 ENSMUST00000224553.2 |
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