RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CELF1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000005506

Ensembl transcript IDs: ENSMUST00000005643.14, ENSMUST00000068726.13, ENSMUST00000068747.14, ENSMUST00000111448.2, ENSMUST00000111449.8, ENSMUST00000111451.10, ENSMUST00000111452.8, ENSMUST00000111455.9, ENSMUST00000177642.8

Found 1131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTaGGCACACAGCAGGCTCTCTCATGCTAGGCGCTGGCATCCTACC +
Preference number: 1 (lower is better)
Translates to: PQHLLPTEALCAVRL*AHSRLSHARRWHPT
Trigger: GGTAGGATGCCAGCGCCTAGCATGAGAGAGCCTGCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 90 bp GCCCTAAGCATCCTGCCTACCCACAGCCACCTTTGGTTCTGCTTCTaGCTCTGGCCCCCTGTACTCCCTGAGCAGAGCAGCCAGCCTCCT +
Preference number: 1 (lower is better)
Translates to: ALSILPTHSHLWFCF*LWPPVLPEQSSQPP
Trigger: AGGAGGCTGGCTGCTCTGCTCAGGGAGTACAGGGGGCCAGAGGCAGAAGCAGAACCAAAGGTGGCTGTGGGTAGGCAGGATGCTTAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 90 bp CAAGCCCAGCTTCTCAGTACACAGGAAGGGGACCGCAGCACCTCCTaGCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCA +
Preference number: 1 (lower is better)
Translates to: QAQLLSTQEGDRSTS*RQRRSVQSDCGHTA
Trigger: TGCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTGTACTGAGAAGCTGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp AGCATCCTGCCTACCCACAGCCACCTTTGGTTCTGCTTCTGCCTCTaGCCCCCTGTACTCCCTGAGCAGAGCAGCCAGCCTCCTGGATCC +
Preference number: 1 (lower is better)
Translates to: SILPTHSHLWFCFCL*PPVLPEQSSQPPGS
Trigger: GGATCCAGGAGGCTGGCTGCTCTGCTCAGGGAGTACAGGGGGCCAGAGGCAGAAGCAGAACCAAAGGTGGCTGTGGGTAGGCAGGATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp GGCAAACGGGATAATGGAAGTACATGGTCTCCCCAGCTGGCTAGCTaGCTAACTGAGCCAGCCATGGCTGACCATGGCTCTGCTGGGGCA +
Preference number: 1 (lower is better)
Translates to: GKRDNGSTWSPQLAS*LTEPAMADHGSAGA
Trigger: TGCCCCAGCAGAGCCATGGTCAGCCATGGCTGGCTCAGTTAGCCAGCTAGCCAGCTGGGGAGACCATGTACTTCCATTATCCCGTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 90 bp TGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGTaGACCGATGGCCTCCTCTGGGTAATCAGAAGTACTGCCCGCCTG +
Preference number: 1 (lower is better)
Translates to: CHLGKAQAGRYIATQ*TDGLLWVIRSTARL
Trigger: CAGGCGGGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGTGCACTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR TCA 90 bp AACTTGTCCTCTGTACGAAGCGACACTCCCACAGAAGGCAGTAGCTaGGTCTTCAGGGCAAGCTGTGCCTGCGAGAGTGGCAGGGATCAG +
Preference number: 1 (lower is better)
Translates to: NLSSVRSDTPTEGSS*VFRASCACESGRDQ
Trigger: CTGATCCCTGCCACTCTCGCAGGCACAGCTTGCCCTGAAGACTCAGCTACTGCCTTCTGTGGGAGTGTCGCTTCGTACAGAGGACAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068726.13
ENSMUST00000111452.8
3UTR GCA 90 bp GAGTGGATGATGCCAGACCGTGCTTCTCTCCCCACCCCCATCCTTTaGTGCACCTTGCCACCCTTTCCTGGACAACCTTGCTTCCACTTT +
Preference number: 1 (lower is better)
Translates to: EWMMPDRASLPTPIL*CTLPPFPGQPCFHF
Trigger: AAAGTGGAAGCAAGGTTGTCCAGGAAAGGGTGGCAAGGTGCAGCAAAGGATGGGGGTGGGGAGAGAAGCACGGTCTGGCATCATCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp CAGAGCAGAAACTGTGCTGGAGTTCCTTCAACACCAGGCAGAGAGTaGATGATGCCAGACCGTGCTTCTCTCCCCACCCCCATCCTTTGC +
Preference number: 1 (lower is better)
Translates to: QSRNCAGVPSTPGRE*MMPDRASLPTPILC
Trigger: GCAAAGGATGGGGGTGGGGAGAGAAGCACGGTCTGGCATCATCCACTCTCTGCCTGGTGTTGAAGGAACTCCAGCACAGTTTCTGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp GCAGTCAGACTGTGGGCACACAGCAGGCTCTCTCATGCTAGGCGCTaGCATCCTACCACCCCTTCCAGGACCTTAAGCAGCATACTTAAG +
Preference number: 1 (lower is better)
Translates to: AVRLWAHSRLSHARR*HPTTPSRTLSSILK
Trigger: CTTAAGTATGCTGCTTAAGGTCCTGGAAGGGGTGGTAGGATGCCAGCGCCTAGCATGAGAGAGCCTGCTGTGTGCCCACAGTCTGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 90 bp ACCCCCATCCTTTGCTGCACCTTGCCACCCTTTCCTGGACAACCTTaGTTCCACTTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATC +
Preference number: 1 (lower is better)
Translates to: TPILCCTLPPFPGQP*FHFPSHQCLSLSGI
Trigger: GATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAAGGGTGGCAAGGTGCAGCAAAGGATGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp ACCCTTGTTCCCAGAAATCCAAGCCCTAAGGTTCCACATACGCCCTaGGCACTCTTGTGGAACCCAGGAGATAGTGGTTGGGCTGCACTG +
Preference number: 1 (lower is better)
Translates to: TLVPRNPSPKVPHTP*ALLWNPGDSGWAAL
Trigger: CAGTGCAGCCCAACCACTATCTCCTGGGTTCCACAAGAGTGCCCAGGGCGTATGTGGAACCTTAGGGCTTGGATTTCTGGGAACAAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR TCA 90 bp AGCCTCCTGGATCCCCCACTGAGACCTGGAGGCCACCACAAAGAGTaGCAGTCTAAGTGCACAGGCAAACACTCTAAGGGCAATAGAGGA +
Preference number: 1 (lower is better)
Translates to: SLLDPPLRPGGHHKE*QSKCTGKHSKGNRG
Trigger: TCCTCTATTGCCCTTAGAGTGTTTGCCTGTGCACTTAGACTGTCACTCTTTGTGGTGGCCTCCAGGTCTCAGTGGGGGATCCAGGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp ACAGCTTCTCTTAGAGCAGGAGAGCCCAGAGGCTATGTGGGACACTaGCAAAGGCTGGAGTTAAGACCCATGAAAGGCAGCAGGGAGCTT +
Preference number: 1 (lower is better)
Translates to: TASLRAGEPRGYVGH*QRLELRPMKGSREL
Trigger: AAGCTCCCTGCTGCCTTTCATGGGTCTTAACTCCAGCCTTTGCCAGTGTCCCACATAGCCTCTGGGCTCTCCTGCTCTAAGAGAAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp GAGGGAACTGTGCTCGAGGACAGTGCTAGTGCTGTGCTAATGCACTaGGCAAACGGGATAATGGAAGTACATGGTCTCCCCAGCTGGCTA +
Preference number: 1 (lower is better)
Translates to: EGTVLEDSASAVLMH*ANGIMEVHGLPSWL
Trigger: TAGCCAGCTGGGGAGACCATGTACTTCCATTATCCCGTTTGCCCAGTGCATTAGCACAGCACTAGCACTGTCCTCGAGCACAGTTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 90 bp CCACCCTTTCCTGGACAACCTTGCTTCCACTTTCCCTCCCACCAGTaGTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGCAGCCT +
Preference number: 1 (lower is better)
Translates to: PPFPGQPCFHFPSHQ*LSLSGICQKSSLQP
Trigger: AGGCTGCAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAAGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR TCA 90 bp AACTTGTCCTCTGTACGAAGCGACACTCCCACAGAAGGCAGTAGCTaGGTCTTCAGGGCAAGCTGTGCCAGAAGATCTTCTCACTCCAGT +
Preference number: 1 (lower is better)
Translates to: NLSSVRSDTPTEGSS*VFRASCARRSSHSS
Trigger: ACTGGAGTGAGAAGATCTTCTGGCACAGCTTGCCCTGAAGACTCAGCTACTGCCTTCTGTGGGAGTGTCGCTTCGTACAGAGGACAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068747.14
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 90 bp TTATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTaGCACTCAGTGCACCGATGGCCTCCTCTGGGTAATCAGAAGTAC +
Preference number: 1 (lower is better)
Translates to: LLCLSPRESAGRQVY*HSVHRWPPLGNQKY
Trigger: GTACTTCTGATTACCCAGAGGAGGCCATCGGTGCACTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 90 bp GAGCAATACATCCAAACAGAGAGAGAGAACAGGACACTCACTGTATaGAGCCCTGAAATGAGGAGACGGGGAAGGGCAGGGGTGGGAAAT +
Preference number: 1 (lower is better)
Translates to: EQYIQTERENRTLTV*SPEMRRRGRAGVGN
Trigger: ATTTCCCACCCCTGCCCTTCCCCGTCTCCTCATTTCAGGGCTGCATACAGTGAGTGTCCTGTTCTCTCTCTCTGTTTGGATGTATTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp ACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTaGCAAGCCCAGCTTCTCAGTACACAGGAAGGGGACCGCAGCACC +
Preference number: 1 (lower is better)
Translates to: TGFPRAPLGIESKLY*QAQLLSTQEGDRST
Trigger: GGTGCTGCGGTCCCCTTCCTGTGTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp CCACATACGCCCTGGGCACTCTTGTGGAACCCAGGAGATAGTGGTTaGGCTGCACTGAAGGCAAATCAATGGCATGATATAATCCACGAA +
Preference number: 1 (lower is better)
Translates to: PHTPWALLWNPGDSG*AALKANQWHDIIHE
Trigger: TTCGTGGATTATATCATGCCATTGATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGGGTTCCACAAGAGTGCCCAGGGCGTATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR TCA 90 bp AGAGGGGAACCTAAGGCTTGGATTTCCTGCAAAGCACCTAACACATaGAGACAGTCTCTGGGCAAGCAGGGTCTCAGCAACAAAAGATGC +
Preference number: 1 (lower is better)
Translates to: RGEPKAWISCKAPNT*RQSLGKQGLSNKRC
Trigger: GCATCTTTTGTTGCTGAGACCCTGCTTGCCCAGAGACTGTCTTCATGTGTTAGGTGCTTTGCAGGAAATCCAAGCCTTAGGTTCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 90 bp CCAACCAGGCAGGGCAATCAATATAACACGAATGTCGGGCTGGGCTaGCTAGTCATGGGTATCTCCCTCCTATTTGCATATTTCAGGCTA +
Preference number: 1 (lower is better)
Translates to: PTRQGNQYNTNVGLG*LVMGISLLFAYFRL
Trigger: TAGCCTGAAATATGCAAATAGGAGGGAGATACCCATGACTAGGCAGCCCAGCCCGACATTCGTGTTATATTGATTGCCCTGCCTGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp TGGCTGCCATTTCTTCCTAGTAAGGTGGCCTCAAGCATAATATATTaGGCAACCTGTAGGGGTCCCAGAGCAGAAACTGTGCTGGAGTTC +
Preference number: 1 (lower is better)
Translates to: WLPFLPSKVASSIIY*ATCRGPRAETVLEF
Trigger: GAACTCCAGCACAGTTTCTGCTCTGGGACCCCTACAGGTTGCCCAATATATTATGCTTGAGGCCACCTTACTAGGAAGAAATGGCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR TCA 90 bp AACAGCAAGATGGTCAATCCCTGTTTGTTATCCACAGGGACAGCATaGCAAGGAGAGTCCCTATCTGACTTAAAGCAGGTTAGCCCCTTC +
Preference number: 1 (lower is better)
Translates to: NSKMVNPCLLSTGTA*QGESLSDLKQVSPF
Trigger: GAAGGGGCTAACCTGCTTTAAGTCAGATAGGGACTCTCCTTGTCATGCTGTCCCTGTGGATAACAAACAGGGATTGACCATCTTGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 90 bp GCTGTGACTACTAATCATATATTTATAGGGCTACCTCTGCTCAGATaGACATTCCCACAGCTTCTCTTAGAGCAGGAGAGCCCAGAGGCT +
Preference number: 1 (lower is better)
Translates to: AVTTNHIFIGLPLLR*TFPQLLLEQESPEA
Trigger: AGCCTCTGGGCTCTCCTGCTCTAAGAGAAGCTGTGGGAATGTGCATCTGAGCAGAGGTAGCCCTATAAATATATGATTAGTAGTCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp GTCTTTAAAACTAAGCACACAGAGGAACAAAGCCTGGAAGCGGACTaGCTGTGTGTTCACAAGGATACAAACACCACACGGCATGTGCTA +
Preference number: 1 (lower is better)
Translates to: VFKTKHTEEQSLEAD*LCVHKDTNTTRHVL
Trigger: TAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACACACAGCCAGTCCGCTTCCAGGCTTTGTTCCTCTGTGTGCTTAGTTTTAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR TCA 90 bp CCTTGTTGGCTAGAGATGCTGTTAAGAGTGTCTTATGTCCCCTCATaGGAAAACTGTGGCCAGAGAAGGAGGCAACATTCCTTGGTGTTA +
Preference number: 1 (lower is better)
Translates to: PCWLEMLLRVSYVPS*ENCGQRRRQHSLVL
Trigger: TAACACCAAGGAATGTTGCCTCCTTCTCTGGCCACAGTTTTCTCATGAGGGGACATAAGACACTCTTAACAGCATCTCTAGCCAACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp CCAATTCACAGCATTAATGTTAGCCTTCCCCTTGGACAGGTTACCTaGGCTGCAAACGGTCACAGAAAGTCAGTAGTTTCAATCATACAC +
Preference number: 1 (lower is better)
Translates to: PIHSINVSLPLGQVT*AANGHRKSVVSIIH
Trigger: GTGTATGATTGAAACTACTGACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACATTAATGCTGTGAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp CATTTGGCATTTGGTTTTATCCACAGGTTTTCCCAGAGCTCCTCTTaGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTAC +
Preference number: 1 (lower is better)
Translates to: HLAFGFIHRFSQSSS*NRKQTILASPASQY
Trigger: GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATAAAACCAAATGCCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp TGGAACCCAGGAGATAGTGGTTGGGCTGCACTGAAGGCAAATCAATaGCATGATATAATCCACGAAACAAAACTACAGCAGAAAACACTG +
Preference number: 1 (lower is better)
Translates to: WNPGDSGWAALKANQ*HDIIHETKLQQKTL
Trigger: CAGTGTTTTCTGCTGTAGTTTTGTTTCGTGGATTATATCATGCCATTGATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGGGTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp ATTTCAAAGTTGTCTTTAAAACTAAGCACACAGAGGAACAAAGCCTaGAAGCGGACTGGCTGTGTGTTCACAAGGATACAAACACCACAC +
Preference number: 1 (lower is better)
Translates to: ISKLSLKLSTQRNKA*KRTGCVFTRIQTPH
Trigger: GTGTGGTGTTTGTATCCTTGTGAACACACAGCCAGTCCGCTTCCAGGCTTTGTTCCTCTGTGTGCTTAGTTTTAAAGACAACTTTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp AAACACAGGACACTTTTCTCCCAGTGCACAGAATTCAAGTTTACGTaGTTCAGCTTAAGAAGTGTATGTTTCATGTTTAAGAGGACAACA +
Preference number: 1 (lower is better)
Translates to: KHRTLFSQCTEFKFT*FSLRSVCFMFKRTT
Trigger: TGTTGTCCTCTTAAACATGAAACATACACTTCTTAAGCTGAACCACGTAAACTTGAATTCTGTGCACTGGGAGAAAAGTGTCCTGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 90 bp AGTTTCAATCATACACAGCACCCTGTGTGTACAACAATCACATTCTaGATTCTACAAAATCCTGGCCTTTTCCAGAGATATAATTTAGGT +
Preference number: 1 (lower is better)
Translates to: SFNHTQHPVCTTITF*ILQNPGLFQRYNLG
Trigger: ACCTAAATTATATCTCTGGAAAAGGCCAGGATTTTGTAGAATCCAGAATGTGATTGTTGTACACACAGGGTGCTGTGTATGATTGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp ACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGAGCCCCCTGTACTCCCTaGGCAGAGCAGCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: TGRGPQHLLPTEALCAVRAPCTP*AEQPAS
Trigger: GGAGGCTGGCTGCTCTGCTCAGGGAGTACAGGGGGC...TCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACGAAGTACTGCCCGCCTaGCCTCCCTCCCTCCGTGAT +
Preference number: 2 (lower is better)
Translates to: QEGDRSTSCRQRRSVQSDEVLPA*PPSLRD
Trigger: ATCACGGAGGGAGGGAGGGCAGGCGGGCAGTACTTC...GTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGTTCTGCTTCTGCCTCTaGCCCCCTGTACTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: HRKGTAAPPADRGALCSQFCFCL*PPVLPE
Trigger: CTCAGGGAGTACAGGGGGCCAGAGGCAGAAGCAGAA...CTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTTCTGCTTCTGCCTCTaGCCCCCTGTACTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: QEGDRSTSCRQRRSVQSDFCFCL*PPVLPE
Trigger: CTCAGGGAGTACAGGGGGCCAGAGGCAGAAGCAGAA...GTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CAGTACACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAAGAGCCAGTGCGGGGTaGTTGGTGCCCAGAGCTGTA +
Preference number: 2 (lower is better)
Translates to: QYTGRGPQHLLPTEALCARASAG*LVPRAV
Trigger: TACAGCTCTGGGCACCAACCACCCCGCACTGGCTCT...TGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTGTACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AAGAACTGGCTGGCCTGGCACCCGGGAACAGTAGCTATCTGGCTCTTCACCCAAGCCCCCTGTACTCCCTaGGCAGAGCAGCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: KNWLAWHPGTVAIWLFTQAPCTP*AEQPAS
Trigger: GGAGGCTGGCTGCTCTGCTCAGGGAGTACAGGGGGC...TTGGGTGAAGAGCCAGATAGCTACTGTTCCCGGGTGCCAGGCCAGCCAGTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCCAGGCAGAGAGTGGATaGTGCCAGACCGTGCTTCTC +
Preference number: 2 (lower is better)
Translates to: QHLLPTEALCAVRLWAHSQAESG*CQTVLL
Trigger: GAGAAGCACGGTCTGGCATCATCCACTCTCTGCCTG...GCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CAGTACACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCACAGGCAGAGAGTGGATaGTGCCAGACCGTGCTTCTC +
Preference number: 2 (lower is better)
Translates to: QYTGRGPQHLLPTEALCAQAESG*CQTVLL
Trigger: GAGAAGCACGGTCTGGCATCATCCACTCTCTGCCTG...TGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTGTACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp ACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGAACCCTAGGGCTTCCCTaGAGGGCTGCTTCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: TGRGPQHLLPTEALCAVRTLGLP*RAASGR
Trigger: TCTTCCTGAAGCAGCCCTGCAGGGAAGCCCTAGGGT...TCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGCTTTGGTTCTGCTTCTaGCTCTGGCCCCCTGTACTC +
Preference number: 2 (lower is better)
Translates to: HRKGTAAPPADRGALCSQLWFCF*LWPPVL
Trigger: GAGTACAGGGGGCCAGAGGCAGAAGCAGAACCAAAG...CTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCGATGATGCCAGACCGTaGTTCTCTCCCCACCCCCAT +
Preference number: 2 (lower is better)
Translates to: QHLLPTEALCAVRLWAHSDDARP*FSPHPH
Trigger: ATGGGGGTGGGGAGAGAAGCACGGTCTGGCATCATC...GCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TGCACCGATGGCCTCCTCTGGGTAATCAGAAGTACTGCCCGCCTGCCCTCCCTCCTTCAGGGCAAGCTGTaGCTGCGAGAGTGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: CTDGLLWVIRSTARLPSLLQGKL*LREWQG
Trigger: TCCCTGCCACTCTCGCAGGCACAGCTTGCCCTGAAG...GAGGGAGGGCAGGCGGGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068726.13
ENSMUST00000111452.8
3UTR-3UTR CCA 90 bp CACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGCAGAGGAACAAAGCCTaGAAGCGGACTGGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: HRKGTAAPPADRGALCSQQRNKA*KRTGCV
Trigger: CACACAGCCAGTCCGCTTCCAGGCTTTGTTCCTCTG...CTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCAGGCTCTTCTGCTTCTGCCTCTaGCCCCCTGTACTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: LLPTEALCAVRLWAHSRLFCFCL*PPVLPE
Trigger: CTCAGGGAGTACAGGGGGCCAGAGGCAGAAGCAGAA...GAGCCTGCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGATTCTGCTTCTGCCTCTaGCCCCCTGTACTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: TGRGPQHLLPTEALCAVRFCFCL*PPVLPE
Trigger: CTCAGGGAGTACAGGGGGCCAGAGGCAGAAGCAGAA...TCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGAAACCAAAGAACTGGCTaGCCTGGCACCCGGGAACAG +
Preference number: 2 (lower is better)
Translates to: TGRGPQHLLPTEALCAVRNQRTG*PGTREQ
Trigger: CTGTTCCCGGGTGCCAGGCCAGCCAGTTCTTTGGTT...TCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGGACCCTGAGGCTGGATaGTGCTACAAGAGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: HRKGTAAPPADRGALCSQDPEAG*CYKRRG
Trigger: CCCTCTTCTCTTGTAGCACCATCCAGCCTCAGGGTC...CTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACAGAAGGCAGTAGCTaGGTCTTCAGGGCAAGCTGT +
Preference number: 2 (lower is better)
Translates to: HRKGTAAPPADRGALCSQTEGSS*VFRASC
Trigger: ACAGCTTGCCCTGAAGACTCAGCTACTGCCTTCTGT...CTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TGCACCGATGGCCTCCTCTGGGTAATCAGAAGTACTGCCCGCCTGCCCTCCCTCACCCTAGGGCTTCCCTaGAGGGCTGCTTCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: CTDGLLWVIRSTARLPSLTLGLP*RAASGR
Trigger: TCTTCCTGAAGCAGCCCTGCAGGGAAGCCCTAGGGT...GAGGGAGGGCAGGCGGGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGAGCCTGGAAGCGGACTaGCTGTGTGTTCACAAGGAT +
Preference number: 2 (lower is better)
Translates to: HRKGTAAPPADRGALCSQSLEAD*LCVHKD
Trigger: ATCCTTGTGAACACACAGCCAGTCCGCTTCCAGGCT...CTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGAGACCCTGAGGCTGGATaGTGCTACAAGAGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: TGRGPQHLLPTEALCAVRDPEAG*CYKRRG
Trigger: CCCTCTTCTCTTGTAGCACCATCCAGCCTCAGGGTC...TCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCGACCCTGAGGCTGGATaGTGCTACAAGAGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: QHLLPTEALCAVRLWAHSDPEAG*CYKRRG
Trigger: CCCTCTTCTCTTGTAGCACCATCCAGCCTCAGGGTC...GCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACCGATGGCCTCCTCTGGGTAATCAGAAGTACTGCCCGCCTGCCCTCCCTCCCTAGCCCAGAGGCTATGTaGGACACTGGCAAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: TDGLLWVIRSTARLPSLPSPEAM*DTGKGW
Trigger: CCAGCCTTTGCCAGTGTCCCACATAGCCTCTGGGCT...AGGGAGGGAGGGCAGGCGGGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCAGGCTCTCCACAGGGACAGCATaGCAAGGAGAGTCCCTATCT +
Preference number: 2 (lower is better)
Translates to: LLPTEALCAVRLWAHSRLSTGTA*QGESLS
Trigger: AGATAGGGACTCTCCTTGTCATGCTGTCCCTGTGGA...GAGCCTGCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGGGCAGGGGTGGGAAATaGCAAGAACTTTTGCACATG +
Preference number: 2 (lower is better)
Translates to: HRKGTAAPPADRGALCSQGRGGK*QELLHM
Trigger: CATGTGCAAAAGTTCTTGTCATTTCCCACCCCTGCC...CTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp ACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGAGCTTCCCTGCAGGGCTaGTTCAGGAAGAACCACAAA +
Preference number: 2 (lower is better)
Translates to: TGRGPQHLLPTEALCAVRASLQG*FRKNHK
Trigger: TTTGTGGTTCTTCCTGAAGCAGCCCTGCAGGGAAGC...TCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCAGGCTCGCTTCCCTGCAGGGCTaGTTCAGGAAGAACCACAAA +
Preference number: 2 (lower is better)
Translates to: LLPTEALCAVRLWAHSRLASLQG*FRKNHK
Trigger: TTTGTGGTTCTTCCTGAAGCAGCCCTGCAGGGAAGC...GAGCCTGCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TGCACCGATGGCCTCCTCTGGGTAATCAGAAGTACTGCCCGCCTGCCCTCCCTCCTTTGGTTCTGCTTCTaGCTCTGGCCCCCTGTACTC +
Preference number: 2 (lower is better)
Translates to: CTDGLLWVIRSTARLPSLLWFCF*LWPPVL
Trigger: GAGTACAGGGGGCCAGAGGCAGAAGCAGAACCAAAG...GAGGGAGGGCAGGCGGGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCTATATTGCCACTCAGTaGACCGATGGCCTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: QHLLPTEALCAVRLWAHSYIATQ*TDGLLW
Trigger: CCAGAGGAGGCCATCGGTGCACTGAGTGGCAATATA...GCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGTTTCCCTCCCACCAGTaGTTAAGTCTCAGTGGGATC +
Preference number: 2 (lower is better)
Translates to: HRKGTAAPPADRGALCSQFPSHQ*LSLSGI
Trigger: GATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA...CTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGCCAGAGCAGAAACTGTaGTGGAGTTCCTTCAACACC +
Preference number: 2 (lower is better)
Translates to: HRKGTAAPPADRGALCSQPEQKL*WSSFNT
Trigger: GGTGTTGAAGGAACTCCAGCACAGTTTCTGCTCTGG...CTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCAGGCTCAGCCTGGAAGCGGACTaGCTGTGTGTTCACAAGGAT +
Preference number: 2 (lower is better)
Translates to: LLPTEALCAVRLWAHSRLSLEAD*LCVHKD
Trigger: ATCCTTGTGAACACACAGCCAGTCCGCTTCCAGGCT...GAGCCTGCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACCTTGCCACCCTTTCCTaGACAACCTTGCTTCCACTT +
Preference number: 2 (lower is better)
Translates to: QEGDRSTSCRQRRSVQSDLATLS*TTLLPL
Trigger: AAGTGGAAGCAAGGTTGTCCAGGAAAGGGTGGCAAG...GTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACCCTCTTCCTCAAGGTaGACTGGTGTTGGTCCTTCT +
Preference number: 2 (lower is better)
Translates to: TGRGPQHLLPTEALCAVRPSSSR*TGVGPS
Trigger: AGAAGGACCAACACCAGTCCACCTTGAGGAAGAGGG...TCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTTTGGACGATGTACTTaGCGCCACATCGACATGCTT +
Preference number: 2 (lower is better)
Translates to: QEGDRSTSCRQRRSVQSDFGRCT*RHIDML
Trigger: AAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAA...GTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTGTGTGTTCACAAGGATACAAACACCACACGGCATGTGCTAGTAGGGCTGCTGCCCCCTGTACTCCCTaGGCAGAGCAGCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: AVCSQGYKHHTACASRAAAPCTP*AEQPAS
Trigger: GGAGGCTGGCTGCTCTGCTCAGGGAGTACAGGGGGC...AGCAGCCCTACTAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACACACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGGCCCCCTGTACTCCCTaGGCAGAGCAGCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: YCACHLGKAQAGRYIATQAPCTP*AEQPAS
Trigger: GGAGGCTGGCTGCTCTGCTCAGGGAGTACAGGGGGC...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp ACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTTCAGGGCAAGCTGTaGCAGAAGATCTTCTCACTC +
Preference number: 2 (lower is better)
Translates to: TGRGPQHLLPTEALCAVRLQGKL*QKIFSL
Trigger: GAGTGAGAAGATCTTCTGGCACAGCTTGCCCTGAAG...TCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068747.14
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TGCACCGATGGCCTCCTCTGGGTAATCAGAAGTACTGCCCGCCTGCCCTCCCTCAGCCTGGAAGCGGACTaGCTGTGTGTTCACAAGGAT +
Preference number: 2 (lower is better)
Translates to: CTDGLLWVIRSTARLPSLSLEAD*LCVHKD
Trigger: ATCCTTGTGAACACACAGCCAGTCCGCTTCCAGGCT...GAGGGAGGGCAGGCGGGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCAGGCTCTTTGGACGATGTACTTaGCGCCACATCGACATGCTT +
Preference number: 2 (lower is better)
Translates to: LLPTEALCAVRLWAHSRLFGRCT*RHIDML
Trigger: AAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAA...GAGCCTGCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGCTAGTAGGGCTGCTCTaGGACAGTTACAAAGAATTG +
Preference number: 2 (lower is better)
Translates to: HRKGTAAPPADRGALCSQLVGLL*DSYKEL
Trigger: CAATTCTTTGTAACTGTCTCAGAGCAGCCCTACTAG...CTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGGCCCCCTGTACTCCCTaGGCAGAGCAGCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRAPCTP*AEQPAS
Trigger: GGAGGCTGGCTGCTCTGCTCAGGGAGTACAGGGGGC...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp ACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGAGACGCCACATCGACATaGTTTAGGCACAACGATGAA +
Preference number: 2 (lower is better)
Translates to: TGRGPQHLLPTEALCAVRDATST*FRHNDE
Trigger: TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC...TCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCGACGCCACATCGACATaGTTTAGGCACAACGATGAA +
Preference number: 2 (lower is better)
Translates to: QHLLPTEALCAVRLWAHSDATST*FRHNDE
Trigger: TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC...GCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CAGTACACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGACGCCACATCGACATaGTTTAGGCACAACGATGAA +
Preference number: 2 (lower is better)
Translates to: QYTGRGPQHLLPTEALCADATST*FRHNDE
Trigger: TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC...TGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTGTACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TCACATTTTGCTGTGGAGACTGTAGGAAGAAGCACGGGTGTGAGCTGGCTGAGCGAAGTACTGCCCGCCTaGCCTCCCTCCCTCCGTGAT +
Preference number: 2 (lower is better)
Translates to: SHFAVETVGRSTGVSWLSEVLPA*PPSLRD
Trigger: ATCACGGAGGGAGGGAGGGCAGGCGGGCAGTACTTC...GCTCAGCCAGCTCACACCCGTGCTTCTTCCTACAGTCTCCACAGCAAAATGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTAGGCGCTGGCATCCTACCACCCCTTCCAGGACCTTAAGCAGCATACTTAAGAGAGCCAGTGCGGGGTaGTTGGTGCCCAGAGCTGTA +
Preference number: 2 (lower is better)
Translates to: ARRWHPTTPSRTLSSILKRASAG*LVPRAV
Trigger: TACAGCTCTGGGCACCAACCACCCCGCACTGGCTCT...CTTAAGTATGCTGCTTAAGGTCCTGGAAGGGGTGGTAGGATGCCAGCGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCCTTAAGTCCCCCACTTaGCTGCCATTTCTTCCTAGT +
Preference number: 2 (lower is better)
Translates to: QHLLPTEALCAVRLWAHSLKSPT*LPFLPS
Trigger: ACTAGGAAGAAATGGCAGCCAAGTGGGGGACTTAAG...GCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTTAAGTCCCCCACTTaGCTGCCATTTCTTCCTAGT +
Preference number: 2 (lower is better)
Translates to: TGRGPQHLLPTEALCAVRLKSPT*LPFLPS
Trigger: ACTAGGAAGAAATGGCAGCCAAGTGGGGGACTTAAG...TCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCAAGGTGGACTGGTGTTaGTCCTTCTCAACAAACTGG +
Preference number: 2 (lower is better)
Translates to: QHLLPTEALCAVRLWAHSKVDWC*SFSTNW
Trigger: CCAGTTTGTTGAGAAGGACCAACACCAGTCCACCTT...GCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCAGGCTCCTTCCCTTAATCAGATaGCTTCTTGACTGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: LLPTEALCAVRLWAHSRLLPLIR*LLDCSA
Trigger: GGCAGAGCAGTCAAGAAGCCATCTGATTAAGGGAAG...GAGCCTGCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CAA 90 bp AGAGTGGATGATGCCAGACCGTGCTTCTCTCCCCACCCCCATCCTTaGCTGCACCTTGCCACCCTTTCCTGGACAACCTTGCTTCCACTT +
Preference number: 2 (lower is better)
Translates to: RVDDARPCFSPHPHP*LHLATLSWTTLLPL
Trigger: AAGTGGAAGCAAGGTTGTCCAGGAAAGGGTGGCAAGGTGCAGCAAAGGATGGGGGTGGGGAGAGAAGCACGGTCTGGCATCATCCACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCCTAGTAGGGCTGCTCTaGGACAGTTACAAAGAATTG +
Preference number: 2 (lower is better)
Translates to: QHLLPTEALCAVRLWAHSLVGLL*DSYKEL
Trigger: CAATTCTTTGTAACTGTCTCAGAGCAGCCCTACTAG...GCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CTGGGCAAACGGGATAATGGAAGTACATGGTCTCCCCAGCTGGCTAGCTGGCTAACCCTAGGGCTTCCCTaGAGGGCTGCTTCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: LGKRDNGSTWSPQLASWLTLGLP*RAASGR
Trigger: TCTTCCTGAAGCAGCCCTGCAGGGAAGCCCTAGGGT...TAGCCAGCTAGCCAGCTGGGGAGACCATGTACTTCCATTATCCCGTTTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACGAAAGCATCACATTTTaGTGTGGAGACTGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: QEGDRSTSCRQRRSVQSDESITF*CGDCRK
Trigger: CTTCCTACAGTCTCCACAGCAAAATGTGATGCTTTC...GTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GCTAGGCGCTGGCATCCTACCACCCCTTCCAGGACCTTAAGCAGCATACTTAAGAGCCACCTTTGGTTCTaGTTCTGCCTCTGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: ARRWHPTTPSRTLSSILKSHLWF*FCLWPP
Trigger: AGGGGGCCAGAGGCAGAAGCAGAACCAAAGGTGGCT...CTTAAGTATGCTGCTTAAGGTCCTGGAAGGGGTGGTAGGATGCCAGCGCCTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGGAAGTACTGCCCGCCTaGCCTCCCTCCCTCCGTGAT +
Preference number: 2 (lower is better)
Translates to: YCACHLGKAQAGRYIATQEVLPA*PPSLRD
Trigger: ATCACGGAGGGAGGGAGGGCAGGCGGGCAGTACTTC...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAGACCGCAGCACCTCCTaGCGACAGAGGCGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGDRSTS*RQRRSV
Trigger: CACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTC...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACCGATGGCCTCCTCTGGGTAATCAGAAGTACTGCCCGCCTGCCCTCCCTCCCTGAAGAGACAGGGATTTaGACGATGTACTTGACGCCA +
Preference number: 2 (lower is better)
Translates to: TDGLLWVIRSTARLPSLPEETGI*TMYLTP
Trigger: TGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC...AGGGAGGGAGGGCAGGCGGGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TGTGGAGACTGTAGGAAGAAGCACGGGTGTGAGCTGGCTGAGCCGAGGGGAGGGGAAGAGACAGGGATTTaGACGATGTACTTGACGCCA +
Preference number: 2 (lower is better)
Translates to: CGDCRKKHGCELAEPRGGEETGI*TMYLTP
Trigger: TGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC...CCCTCCCCTCGGCTCAGCCAGCTCACACCCGTGCTTCTTCCTACAGTCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTTTGCTGTGGAGACTGTAGGAAGAAGCACGGGTGTGAGCTGGCTGAGCCGAGGCAGAGGAACAAAGCCTaGAAGCGGACTGGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: FCCGDCRKKHGCELAEPRQRNKA*KRTGCV
Trigger: CACACAGCCAGTCCGCTTCCAGGCTTTGTTCCTCTG...CCTCGGCTCAGCCAGCTCACACCCGTGCTTCTTCCTACAGTCTCCACAGCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTAGGCGCTGGCATCCTACCACCCCTTCCAGGACCTTAAGCAGCATACTTAAGTCCCCCACTGAGACCTaGAGGCCACCACAAAGAGTG +
Preference number: 2 (lower is better)
Translates to: ARRWHPTTPSRTLSSILKSPTET*RPPQRV
Trigger: CACTCTTTGTGGTGGCCTCCAGGTCTCAGTGGGGGA...CTTAAGTATGCTGCTTAAGGTCCTGGAAGGGGTGGTAGGATGCCAGCGCCTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGATCAAGCATAATATATTaGGCAACCTGTAGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: TGRGPQHLLPTEALCAVRSSIIY*ATCRGP
Trigger: GGGACCCCTACAGGTTGCCCAATATATTATGCTTGA...TCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGGAAAGCAAACTATATTaGCAAGCCCAGCTTCTCAGT +
Preference number: 2 (lower is better)
Translates to: HRKGTAAPPADRGALCSQESKLY*QAQLLS
Trigger: ACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTC...CTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp ACCGATGGCCTCCTCTGGGTAATCAGAAGTACTGCCCGCCTGCCCTCCCTCCCTCTAGTAGGGCTGCTCTaGGACAGTTACAAAGAATTG +
Preference number: 2 (lower is better)
Translates to: TDGLLWVIRSTARLPSLPLVGLL*DSYKEL
Trigger: CAATTCTTTGTAACTGTCTCAGAGCAGCCCTACTAG...AGGGAGGGAGGGCAGGCGGGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACGCCCCCTGTACTCCCTaGGCAGAGCAGCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: SSSWNRKQTILASPASQYAPCTP*AEQPAS
Trigger: GGAGGCTGGCTGCTCTGCTCAGGGAGTACAGGGGGC...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCACTTCTGAACCTTCTTaGATACTAGGCTCTGCTCAA +
Preference number: 2 (lower is better)
Translates to: QHLLPTEALCAVRLWAHSTSEPS*ILGSAQ
Trigger: TTGAGCAGAGCCTAGTATTCAAGAAGGTTCAGAAGT...GCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCAGGCCGGTTGGGATTCTaGGCAGTGCCTGCCCAACCT +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPGRLGF*AVPAQP
Trigger: AGGTTGGGCAGGCACTGCTCAGAATCCCAACCGGCC...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACAAATTAATAACAACATaGGGTCTCCTCAAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: QEGDRSTSCRQRRSVQSDKLITT*GLLKPQ
Trigger: TTGGGGCTTGAGGAGACCGCATGTTGTTATTAATTT...GTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TCACATTTTGCTGTGGAGACTGTAGGAAGAAGCACGGGTGTGAGCTGGCTGAGCAGCCACCTTTGGTTCTaGTTCTGCCTCTGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: SHFAVETVGRSTGVSWLSSHLWF*FCLWPP
Trigger: AGGGGGCCAGAGGCAGAAGCAGAACCAAAGGTGGCT...GCTCAGCCAGCTCACACCCGTGCTTCTTCCTACAGTCTCCACAGCAAAATGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GATGGTCAATCCCTGTTTGTTATCCACAGGGACAGCATGACAAGGAGAGTCCCTGAAGTACTGCCCGCCTaGCCTCCCTCCCTCCGTGAT +
Preference number: 2 (lower is better)
Translates to: DGQSLFVIHRDSMTRRVPEVLPA*PPSLRD
Trigger: ATCACGGAGGGAGGGAGGGCAGGCGGGCAGTACTTC...AGGGACTCTCCTTGTCATGCTGTCCCTGTGGATAACAAACAGGGATTGACCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AAGAACTGGCTGGCCTGGCACCCGGGAACAGTAGCTATCTGGCTCTTCACCCAATATATTGCCACTCAGTaGACCGATGGCCTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: KNWLAWHPGTVAIWLFTQYIATQ*TDGLLW
Trigger: CCAGAGGAGGCCATCGGTGCACTGAGTGGCAATATA...TTGGGTGAAGAGCCAGATAGCTACTGTTCCCGGGTGCCAGGCCAGCCAGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTAGGCGCTGGCATCCTACCACCCCTTCCAGGACCTTAAGCAGCATACTTAAGCAGAGGAACAAAGCCTaGAAGCGGACTGGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: ARRWHPTTPSRTLSSILKQRNKA*KRTGCV
Trigger: CACACAGCCAGTCCGCTTCCAGGCTTTGTTCCTCTG...CTTAAGTATGCTGCTTAAGGTCCTGGAAGGGGTGGTAGGATGCCAGCGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ATGTTAGCCTTCCCCTTGGACAGGTTACCTGGGCTGCAAACGGTCACAGAAAGTAGAGCCAGTGCGGGGTaGTTGGTGCCCAGAGCTGTA +
Preference number: 2 (lower is better)
Translates to: MLAFPLDRLPGLQTVTESRASAG*LVPRAV
Trigger: TACAGCTCTGGGCACCAACCACCCCGCACTGGCTCT...ACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TCACATTTTGCTGTGGAGACTGTAGGAAGAAGCACGGGTGTGAGCTGGCTGAGCAACCAAAGAACTGGCTaGCCTGGCACCCGGGAACAG +
Preference number: 2 (lower is better)
Translates to: SHFAVETVGRSTGVSWLSNQRTG*PGTREQ
Trigger: CTGTTCCCGGGTGCCAGGCCAGCCAGTTCTTTGGTT...GCTCAGCCAGCTCACACCCGTGCTTCTTCCTACAGTCTCCACAGCAAAATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTAGGCGCTGGCATCCTACCACCCCTTCCAGGACCTTAAGCAGCATACTTAAGGACCCTGAGGCTGGATaGTGCTACAAGAGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: ARRWHPTTPSRTLSSILKDPEAG*CYKRRG
Trigger: CCCTCTTCTCTTGTAGCACCATCCAGCCTCAGGGTC...CTTAAGTATGCTGCTTAAGGTCCTGGAAGGGGTGGTAGGATGCCAGCGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CAA 90 bp CCCAGAAATCCAAGCCCTAAGGTTCCACATACGCCCTGGGCACTCTaGTGGAACCCAGGAGATAGTGGTTGGGCTGCACTGAAGGCAAAT +
Preference number: 2 (lower is better)
Translates to: PRNPSPKVPHTPWAL*WNPGDSGWAALKAN
Trigger: ATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGGGTTCCACAAGAGTGCCCAGGGCGTATGTGGAACCTTAGGGCTTGGATTTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TCACATTTTGCTGTGGAGACTGTAGGAAGAAGCACGGGTGTGAGCTGGCTGAGCGGCCACCACAAAGAGTaGCAGTCTAAGTGCACAGGC +
Preference number: 2 (lower is better)
Translates to: SHFAVETVGRSTGVSWLSGHHKE*QSKCTG
Trigger: GCCTGTGCACTTAGACTGTCACTCTTTGTGGTGGCC...GCTCAGCCAGCTCACACCCGTGCTTCTTCCTACAGTCTCCACAGCAAAATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTAGGCGCTGGCATCCTACCACCCCTTCCAGGACCTTAAGCAGCATACTTAAGTCCACAGGGACAGCATaGCAAGGAGAGTCCCTATCT +
Preference number: 2 (lower is better)
Translates to: ARRWHPTTPSRTLSSILKSTGTA*QGESLS
Trigger: AGATAGGGACTCTCCTTGTCATGCTGTCCCTGTGGA...CTTAAGTATGCTGCTTAAGGTCCTGGAAGGGGTGGTAGGATGCCAGCGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp ACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGAAAATTAATAACAACATaGGGTCTCCTCAAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: TGRGPQHLLPTEALCAVRKLITT*GLLKPQ
Trigger: TTGGGGCTTGAGGAGACCGCATGTTGTTATTAATTT...TCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGACCCTAGGGCTTCCCTaGAGGGCTGCTTCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: YCACHLGKAQAGRYIATQTLGLP*RAASGR
Trigger: TCTTCCTGAAGCAGCCCTGCAGGGAAGCCCTAGGGT...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp ACCGATGGCCTCCTCTGGGTAATCAGAAGTACTGCCCGCCTGCCCTCCCTCCCTGAAAGCATCACATTTTaGTGTGGAGACTGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: TDGLLWVIRSTARLPSLPESITF*CGDCRK
Trigger: CTTCCTACAGTCTCCACAGCAAAATGTGATGCTTTC...AGGGAGGGAGGGCAGGCGGGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GACTGTAGTATTTATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATGAAGTACTGCCCGCCTaGCCTCCCTCCCTCCGTGAT +
Preference number: 2 (lower is better)
Translates to: DCSIYCACHLGKAQAGRYEVLPA*PPSLRD
Trigger: ATCACGGAGGGAGGGAGGGCAGGCGGGCAGTACTTC...ATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATAAATACTACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGGACAGAGGCGCTCTGTaGAGTCAGACTGTGGGCACA +
Preference number: 2 (lower is better)
Translates to: YCACHLGKAQAGRYIATQDRGAL*SQTVGT
Trigger: TGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTC...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTAGGCGCTGGCATCCTACCACCCCTTCCAGGACCTTAAGCAGCATACTTAAGAGCCTGGAAGCGGACTaGCTGTGTGTTCACAAGGAT +
Preference number: 2 (lower is better)
Translates to: ARRWHPTTPSRTLSSILKSLEAD*LCVHKD
Trigger: ATCCTTGTGAACACACAGCCAGTCCGCTTCCAGGCT...CTTAAGTATGCTGCTTAAGGTCCTGGAAGGGGTGGTAGGATGCCAGCGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGAACCAAAGAACTGGCTaGCCTGGCACCCGGGAACAG +
Preference number: 2 (lower is better)
Translates to: YCACHLGKAQAGRYIATQNQRTG*PGTREQ
Trigger: CTGTTCCCGGGTGCCAGGCCAGCCAGTTCTTTGGTT...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACCGATGGCCTCCTCTGGGTAATCAGAAGTACTGCCCGCCTGCCCTCCCTCCCTAAACCCCTCAGGATATaGCACCTAAACTCCAAAGTA +
Preference number: 2 (lower is better)
Translates to: TDGLLWVIRSTARLPSLPKPLRI*HLNSKV
Trigger: TACTTTGGAGTTTAGGTGCCATATCCTGAGGGGTTT...AGGGAGGGAGGGCAGGCGGGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTCCTTCTCAACAAACTaGTTACAAACACAGCAAACT +
Preference number: 2 (lower is better)
Translates to: QEGDRSTSCRQRRSVQSDSFSTN*LQTQQT
Trigger: AGTTTGCTGTGTTTGTAACCAGTTTGTTGAGAAGGA...GTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGTCCTTCTCAACAAACTaGTTACAAACACAGCAAACT +
Preference number: 2 (lower is better)
Translates to: HRKGTAAPPADRGALCSQSFSTN*LQTQQT
Trigger: AGTTTGCTGTGTTTGTAACCAGTTTGTTGAGAAGGA...CTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCAGGCTCTGGGAACACAGCTTTTaGAGTACCTTCATTAAGGAA +
Preference number: 2 (lower is better)
Translates to: LLPTEALCAVRLWAHSRLWEHSF*STFIKE
Trigger: TTCCTTAATGAAGGTACTCCAAAAGCTGTGTTCCCA...GAGCCTGCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGATGGGAACACAGCTTTTaGAGTACCTTCATTAAGGAA +
Preference number: 2 (lower is better)
Translates to: TGRGPQHLLPTEALCAVRWEHSF*STFIKE
Trigger: TTCCTTAATGAAGGTACTCCAAAAGCTGTGTTCCCA...TCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGACTGGCAGCTCCCTGTaGAGCACAGCTCTCGCCTCT +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLTGSSL*STALAS
Trigger: AGAGGCGAGAGCTGTGCTCCACAGGGAGCTGCCAGT...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTGTGGAACCCAGGAGATAGTGGTTGGGCTGCACTGAAGGCAAATCAATGGCATCCCCAGCTGGCTAGCTaGCTAACTGAGCCAGCCATG +
Preference number: 2 (lower is better)
Translates to: LWNPGDSGWAALKANQWHPQLAS*LTEPAM
Trigger: CATGGCTGGCTCAGTTAGCCAGCTAGCCAGCTGGGG...ATGCCATTGATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGGGTTCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TGCACCGATGGCCTCCTCTGGGTAATCAGAAGTACTGCCCGCCTGCCCTCCCTCATACATACGAAGGTGTaGAGAAACAGCAGGAAACAT +
Preference number: 2 (lower is better)
Translates to: CTDGLLWVIRSTARLPSLIHTKV*RNSRKH
Trigger: ATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTAT...GAGGGAGGGCAGGCGGGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTGTGTGTTCACAAGGATACAAACACCACACGGCATGTGCTAGTAGGGCTGCTGGCCACCACAAAGAGTaGCAGTCTAAGTGCACAGGC +
Preference number: 2 (lower is better)
Translates to: AVCSQGYKHHTACASRAAGHHKE*QSKCTG
Trigger: GCCTGTGCACTTAGACTGTCACTCTTTGTGGTGGCC...AGCAGCCCTACTAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACACACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CATATATTTATAGGGCTACCTCTGCTCAGATGCACATTCCCACAGCTTCTCTTAGCCCCCTGTACTCCCTaGGCAGAGCAGCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: HIFIGLPLLRCTFPQLLLAPCTP*AEQPAS
Trigger: GGAGGCTGGCTGCTCTGCTCAGGGAGTACAGGGGGC...TAAGAGAAGCTGTGGGAATGTGCATCTGAGCAGAGGTAGCCCTATAAATATATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGTATGCAGCCCTGAAATaGGGAGACGGGGAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLYAALK*GDGEGQ
Trigger: CTGCCCTTCCCCGTCTCCTCATTTCAGGGCTGCATA...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TGTGGAGACTGTAGGAAGAAGCACGGGTGTGAGCTGGCTGAGCCGAGGGGAGGGAAATTAATAACAACATaGGGTCTCCTCAAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: CGDCRKKHGCELAEPRGGKLITT*GLLKPQ
Trigger: TTGGGGCTTGAGGAGACCGCATGTTGTTATTAATTT...CCCTCCCCTCGGCTCAGCCAGCTCACACCCGTGCTTCTTCCTACAGTCTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGACCCTAGGGCTTCCCTaGAGGGCTGCTTCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRTLGLP*RAASGR
Trigger: TCTTCCTGAAGCAGCCCTGCAGGGAAGCCCTAGGGT...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AGCATTAATGTTAGCCTTCCCCTTGGACAGGTTACCTGGGCTGCAAACGGTCACCTTTGGTTCTGCTTCTaGCTCTGGCCCCCTGTACTC +
Preference number: 2 (lower is better)
Translates to: SINVSLPLGQVTWAANGHLWFCF*LWPPVL
Trigger: GAGTACAGGGGGCCAGAGGCAGAAGCAGAACCAAAG...GTGACCGTTTGCAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACATTAATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGAGCCACCTTTGGTTCTaGTTCTGCCTCTGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLSHLWF*FCLWPP
Trigger: AGGGGGCCAGAGGCAGAAGCAGAACCAAAGGTGGCT...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGGGCAGGCAGGTATATTaGCACTCAGTGCACCGATGG +
Preference number: 2 (lower is better)
Translates to: YCACHLGKAQAGRYIATQGRQVY*HSVHRW
Trigger: CCATCGGTGCACTGAGTGGCAATATACCTGCCTGCC...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TCACATTTTGCTGTGGAGACTGTAGGAAGAAGCACGGGTGTGAGCTGGCTGAGCTCCTTTGCTGCACCTTaGCACCCTTTCCTGGACAAC +
Preference number: 2 (lower is better)
Translates to: SHFAVETVGRSTGVSWLSSFAAP*HPFLDN
Trigger: GTTGTCCAGGAAAGGGTGGCAAGGTGCAGCAAAGGA...GCTCAGCCAGCTCACACCCGTGCTTCTTCCTACAGTCTCCACAGCAAAATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TTTCCTGGACAACCTTGCTTCCACTTTCCCTCCCACCAGTGCTTAAGTCTCAGTGATGATGCCAGACCGTaGTTCTCTCCCCACCCCCAT +
Preference number: 2 (lower is better)
Translates to: FPGQPCFHFPSHQCLSLSDDARP*FSPHPH
Trigger: ATGGGGGTGGGGAGAGAAGCACGGTCTGGCATCATC...ACTGAGACTTAAGCACTGGTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGGACAGAGGCGCTCTGTaGAGTCAGACTGTGGGCACA +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLDRGAL*SQTVGT
Trigger: TGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTC...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGTCCCCCACTGAGACCTaGAGGCCACCACAAAGAGTG +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLSPTET*RPPQRV
Trigger: CACTCTTTGTGGTGGCCTCCAGGTCTCAGTGGGGGA...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTGTGTGTTCACAAGGATACAAACACCACACGGCATGTGCTAGTAGGGCTGCTTGTGCAGTCAGACTGTaGGCACACAGCAGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: AVCSQGYKHHTACASRAACAVRL*AHSRLS
Trigger: AGAGAGCCTGCTGTGTGCCCACAGTCTGACTGCACA...AGCAGCCCTACTAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACACACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AAGAACTGGCTGGCCTGGCACCCGGGAACAGTAGCTATCTGGCTCTTCACCCAACTTCCCTTAATCAGATaGCTTCTTGACTGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: KNWLAWHPGTVAIWLFTQLPLIR*LLDCSA
Trigger: GGCAGAGCAGTCAAGAAGCCATCTGATTAAGGGAAG...TTGGGTGAAGAGCCAGATAGCTACTGTTCCCGGGTGCCAGGCCAGCCAGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAGCCCAGAGGCTATGTaGGACACTGGCAAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRSPEAM*DTGKGW
Trigger: CCAGCCTTTGCCAGTGTCCCACATAGCCTCTGGGCT...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCTGTACAACAGCAAGATaGTCAATCCCTGTTTGTTAT +
Preference number: 2 (lower is better)
Translates to: QHLLPTEALCAVRLWAHSCTTAR*SIPVCY
Trigger: ATAACAAACAGGGATTGACCATCTTGCTGTTGTACA...GCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TCACATTTTGCTGTGGAGACTGTAGGAAGAAGCACGGGTGTGAGCTGGCTGAGCCTTGGACAGGTTACCTaGGCTGCAAACGGTCACAGA +
Preference number: 2 (lower is better)
Translates to: SHFAVETVGRSTGVSWLSLGQVT*AANGHR
Trigger: TCTGTGACCGTTTGCAGCCCAGGTAACCTGTCCAAG...GCTCAGCCAGCTCACACCCGTGCTTCTTCCTACAGTCTCCACAGCAAAATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CTGGGCAAACGGGATAATGGAAGTACATGGTCTCCCCAGCTGGCTAGCTGGCTAGGTCTGTTCCAAAGGTaGGGTCACTCCTTTGCTTCT +
Preference number: 2 (lower is better)
Translates to: LGKRDNGSTWSPQLASWLGLFQR*GHSFAS
Trigger: AGAAGCAAAGGAGTGACCCCACCTTTGGAACAGACC...TAGCCAGCTAGCCAGCTGGGGAGACCATGTACTTCCATTATCCCGTTTGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CAA 90 bp CACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATaGGCAAGCCCAGCTTCTCAGTACACAGGAAGGGGACCGCAGCAC +
Preference number: 2 (lower is better)
Translates to: HRFSQSSSWNRKQTI*ASPASQYTGRGPQH
Trigger: GTGCTGCGGTCCCCTTCCTGTGTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AAGAACTGGCTGGCCTGGCACCCGGGAACAGTAGCTATCTGGCTCTTCACCCAACTAGTAGGGCTGCTCTaGGACAGTTACAAAGAATTG +
Preference number: 2 (lower is better)
Translates to: KNWLAWHPGTVAIWLFTQLVGLL*DSYKEL
Trigger: CAATTCTTTGTAACTGTCTCAGAGCAGCCCTACTAG...TTGGGTGAAGAGCCAGATAGCTACTGTTCCCGGGTGCCAGGCCAGCCAGTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTAGGCGCTGGCATCCTACCACCCCTTCCAGGACCTTAAGCAGCATACTTAAGAACCTCAGCATTCAGTaGAAAGGGAATGGGGGTAAG +
Preference number: 2 (lower is better)
Translates to: ARRWHPTTPSRTLSSILKNLSIQ*KGNGGK
Trigger: CTTACCCCCATTCCCTTTTCACTGAATGCTGAGGTT...CTTAAGTATGCTGCTTAAGGTCCTGGAAGGGGTGGTAGGATGCCAGCGCCTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGGGCCACCACAAAGAGTaGCAGTCTAAGTGCACAGGC +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLGHHKE*QSKCTG
Trigger: GCCTGTGCACTTAGACTGTCACTCTTTGTGGTGGCC...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCAAAGTCCCCAAGACCCTaGGGCTGGATGGTGCTACAA +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPKSPRP*GWMVLQ
Trigger: TTGTAGCACCATCCAGCCTCAGGGTCTTGGGGACTT...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGAAGTCCCCAAGACCCTaGGGCTGGATGGTGCTACAA +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLKSPRP*GWMVLQ
Trigger: TTGTAGCACCATCCAGCCTCAGGGTCTTGGGGACTT...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAAGTCCCCAAGACCCTaGGGCTGGATGGTGCTACAA +
Preference number: 2 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRKSPRP*GWMVLQ
Trigger: TTGTAGCACCATCCAGCCTCAGGGTCTTGGGGACTT...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAAAGTCCCCAAGACCCTaGGGCTGGATGGTGCTACAA +
Preference number: 2 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGKSPRP*GWMVLQ
Trigger: TTGTAGCACCATCCAGCCTCAGGGTCTTGGGGACTT...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TTGTGGAACCCAGGAGATAGTGGTTGGGCTGCACTGAAGGCAAATCAATGGCATGGTTTAAGCTTCCAATaGCCCAGGAACCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: LWNPGDSGWAALKANQWHGLSFQ*PRNPGP
Trigger: AGGGCCTGGGTTCCTGGGTCATTGGAAGCTTAAACC...ATGCCATTGATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGGGTTCCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp ACAGGTTACCTGGGCTGCAAACGGTCACAGAAAGTCAGTAGTTTCAATCATACAGGCCGGTTGGGATTCTaGGCAGTGCCTGCCCAACCT +
Preference number: 2 (lower is better)
Translates to: TGYLGCKRSQKVSSFNHTGRLGF*AVPAQP
Trigger: AGGTTGGGCAGGCACTGCTCAGAATCCCAACCGGCC...TGTATGATTGAAACTACTGACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TCACATTTTGCTGTGGAGACTGTAGGAAGAAGCACGGGTGTGAGCTGGCTGAGCGTCTCCACTCTAAGCTaGGCCCTTTCACATCAAGAC +
Preference number: 2 (lower is better)
Translates to: SHFAVETVGRSTGVSWLSVSTLS*ALSHQD
Trigger: GTCTTGATGTGAAAGGGCTCAGCTTAGAGTGGAGAC...GCTCAGCCAGCTCACACCCGTGCTTCTTCCTACAGTCTCCACAGCAAAATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGGCTTCCCTGCAGGGCTaGTTCAGGAAGAACCACAAA +
Preference number: 2 (lower is better)
Translates to: YCACHLGKAQAGRYIATQASLQG*FRKNHK
Trigger: TTTGTGGTTCTTCCTGAAGCAGCCCTGCAGGGAAGC...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GACTGTAGTATTTATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATACCCTAGGGCTTCCCTaGAGGGCTGCTTCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: DCSIYCACHLGKAQAGRYTLGLP*RAASGR
Trigger: TCTTCCTGAAGCAGCCCTGCAGGGAAGCCCTAGGGT...ATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATAAATACTACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTTTGGTTCTGCTTCTaGCTCTGGCCCCCTGTACTC +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPLWFCF*LWPPVL
Trigger: GAGTACAGGGGGCCAGAGGCAGAAGCAGAACCAAAG...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCGAAGTACTGCCCGCCTaGCCTCCCTCCCTCCGTGAT +
Preference number: 2 (lower is better)
Translates to: YPQVFPELLLESKANYIGEVLPA*PPSLRD
Trigger: ATCACGGAGGGAGGGAGGGCAGGCGGGCAGTACTTC...GCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGGGCAGGCAGGTATATTaGCACTCAGTGCACCGATGG +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLGRQVY*HSVHRW
Trigger: CCATCGGTGCACTGAGTGGCAATATACCTGCCTGCC...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp ATGTTAGCCTTCCCCTTGGACAGGTTACCTGGGCTGCAAACGGTCACAGAAAGTTCCTTTGCTGCACCTTaGCACCCTTTCCTGGACAAC +
Preference number: 2 (lower is better)
Translates to: MLAFPLDRLPGLQTVTESSFAAP*HPFLDN
Trigger: GTTGTCCAGGAAAGGGTGGCAAGGTGCAGCAAAGGA...ACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCGATGATGCCAGACCGTaGTTCTCTCCCCACCCCCAT +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTDDARP*FSPHPH
Trigger: ATGGGGGTGGGGAGAGAAGCACGGTCTGGCATCATC...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTGTGGAACCCAGGAGATAGTGGTTGGGCTGCACTGAAGGCAAATCAATGGCATCAGAGGAACAAAGCCTaGAAGCGGACTGGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: LWNPGDSGWAALKANQWHQRNKA*KRTGCV
Trigger: CACACAGCCAGTCCGCTTCCAGGCTTTGTTCCTCTG...ATGCCATTGATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGGGTTCCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCTCCCCCACTGAGACCTaGAGGCCACCACAAAGAGTG +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTSPTET*RPPQRV
Trigger: CACTCTTTGTGGTGGCCTCCAGGTCTCAGTGGGGGA...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GACTGTAGTATTTATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATTCCCCCACTGAGACCTaGAGGCCACCACAAAGAGTG +
Preference number: 2 (lower is better)
Translates to: DCSIYCACHLGKAQAGRYSPTET*RPPQRV
Trigger: CACTCTTTGTGGTGGCCTCCAGGTCTCAGTGGGGGA...ATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATAAATACTACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGACCGATGGCCTCCTCTaGGTAATCAGAAGTACTGCC +
Preference number: 2 (lower is better)
Translates to: YCACHLGKAQAGRYIATQTDGLL*VIRSTA
Trigger: GGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGT...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTTCCTGGACAACCTTGCTTCCACTTTCCCTCCCACCAGTGCTTAAGTCTCAGTGACCCTGAGGCTGGATaGTGCTACAAGAGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: FPGQPCFHFPSHQCLSLSDPEAG*CYKRRG
Trigger: CCCTCTTCTCTTGTAGCACCATCCAGCCTCAGGGTC...ACTGAGACTTAAGCACTGGTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGGACCCTGAGGCTGGATaGTGCTACAAGAGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRDPEAG*CYKRRG
Trigger: CCCTCTTCTCTTGTAGCACCATCCAGCCTCAGGGTC...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGTGTGCAGTCAGACTGTaGGCACACAGCAGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRCAVRL*AHSRLS
Trigger: AGAGAGCCTGCTGTGTGCCCACAGTCTGACTGCACA...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCATGTGCAGTCAGACTGTaGGCACACAGCAGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPCAVRL*AHSRLS
Trigger: AGAGAGCCTGCTGTGTGCCCACAGTCTGACTGCACA...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTAGGCGCTGGCATCCTACCACCCCTTCCAGGACCTTAAGCAGCATACTTAAGAAGGTGGACTGGTGTTaGTCCTTCTCAACAAACTGG +
Preference number: 2 (lower is better)
Translates to: ARRWHPTTPSRTLSSILKKVDWC*SFSTNW
Trigger: CCAGTTTGTTGAGAAGGACCAACACCAGTCCACCTT...CTTAAGTATGCTGCTTAAGGTCCTGGAAGGGGTGGTAGGATGCCAGCGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGAAACCATCTTTGGCCTaGGGAGGGAACTGTGCTCGA +
Preference number: 2 (lower is better)
Translates to: YCACHLGKAQAGRYIATQKPSLA*GGNCAR
Trigger: TCGAGCACAGTTCCCTCCCCAGGCCAAAGATGGTTT...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGCATGAAGACAGTCTCTaGGCAAGCAGGGTCTCAGCA +
Preference number: 2 (lower is better)
Translates to: YCACHLGKAQAGRYIATQHEDSL*ASRVSA
Trigger: TGCTGAGACCCTGCTTGCCCAGAGACTGTCTTCATG...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CTGGGCAAACGGGATAATGGAAGTACATGGTCTCCCCAGCTGGCTAGCTGGCTAACACAAGGTCAAAGGTaGGAGTTCAAGCATCAGAGA +
Preference number: 2 (lower is better)
Translates to: LGKRDNGSTWSPQLASWLTQGQR*EFKHQR
Trigger: TCTCTGATGCTTGAACTCTCACCTTTGACCTTGTGT...TAGCCAGCTAGCCAGCTGGGGAGACCATGTACTTCCATTATCCCGTTTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCGGCCACCACAAAGAGTaGCAGTCTAAGTGCACAGGC +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTGHHKE*QSKCTG
Trigger: GCCTGTGCACTTAGACTGTCACTCTTTGTGGTGGCC...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCAAGTCCCCAAGACCCTaGGGCTGGATGGTGCTACAA +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTKSPRP*GWMVLQ
Trigger: TTGTAGCACCATCCAGCCTCAGGGTCTTGGGGACTT...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCAACAGAAGGCAGTAGCTaGGTCTTCAGGGCAAGCTGT +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPTEGSS*VFRASC
Trigger: ACAGCTTGCCCTGAAGACTCAGCTACTGCCTTCTGT...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AAGCTAAGACACCTCACCCACTCACCCACCCCGTACCTCATTAGACTTAGTTCTACAGAAGGCAGTAGCTaGGTCTTCAGGGCAAGCTGT +
Preference number: 2 (lower is better)
Translates to: KLRHLTHSPTPYLIRLSSTEGSS*VFRASC
Trigger: ACAGCTTGCCCTGAAGACTCAGCTACTGCCTTCTGT...AGAACTAAGTCTAATGAGGTACGGGGTGGGTGAGTGGGTGAGGTGTCTTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CTGGGCAAACGGGATAATGGAAGTACATGGTCTCCCCAGCTGGCTAGCTGGCTATATAGCAAAGTGGCTTaGAGTGACCTTGATTCAGGC +
Preference number: 2 (lower is better)
Translates to: LGKRDNGSTWSPQLASWLYSKVA*SDLDSG
Trigger: GCCTGAATCAAGGTCACTTCAAGCCACTTTGCTATA...TAGCCAGCTAGCCAGCTGGGGAGACCATGTACTTCCATTATCCCGTTTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTAGGCGCTGGCATCCTACCACCCCTTCCAGGACCTTAAGCAGCATACTTAAGTATAGCAAAGTGGCTTaGAGTGACCTTGATTCAGGC +
Preference number: 2 (lower is better)
Translates to: ARRWHPTTPSRTLSSILKYSKVA*SDLDSG
Trigger: GCCTGAATCAAGGTCACTTCAAGCCACTTTGCTATA...CTTAAGTATGCTGCTTAAGGTCCTGGAAGGGGTGGTAGGATGCCAGCGCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACTATGCAGCCCTGAAATaGGGAGACGGGGAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: SSSWNRKQTILASPASQYYAALK*GDGEGQ
Trigger: CTGCCCTTCCCCGTCTCCTCATTTCAGGGCTGCATA...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GGACACTGGCAAAGGCTGGAGTTAAGACCCATGAAAGGCAGCAGGGAGCTTACTGACGCCACATCGACATaGTTTAGGCACAACGATGAA +
Preference number: 2 (lower is better)
Translates to: GHWQRLELRPMKGSRELTDATST*FRHNDE
Trigger: TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC...AGTAAGCTCCCTGCTGCCTTTCATGGGTCTTAACTCCAGCCTTTGCCAGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGTATATTGCCACTCAGTaGACCGATGGCCTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRYIATQ*TDGLLW
Trigger: CCAGAGGAGGCCATCGGTGCACTGAGTGGCAATATA...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GCTGTGTGTTCACAAGGATACAAACACCACACGGCATGTGCTAGTAGGGCTGCTTTTCCCTCCCACCAGTaGTTAAGTCTCAGTGGGATC +
Preference number: 2 (lower is better)
Translates to: AVCSQGYKHHTACASRAAFPSHQ*LSLSGI
Trigger: GATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA...AGCAGCCCTACTAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACACACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGTCCTTTGCTGCACCTTaGCACCCTTTCCTGGACAAC +
Preference number: 2 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRSFAAP*HPFLDN
Trigger: GTTGTCCAGGAAAGGGTGGCAAGGTGCAGCAAAGGA...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp ATGTTAGCCTTCCCCTTGGACAGGTTACCTGGGCTGCAAACGGTCACAGAAAGTCCAGAGCAGAAACTGTaGTGGAGTTCCTTCAACACC +
Preference number: 2 (lower is better)
Translates to: MLAFPLDRLPGLQTVTESPEQKL*WSSFNT
Trigger: GGTGTTGAAGGAACTCCAGCACAGTTTCTGCTCTGG...ACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp ATGTTAGCCTTCCCCTTGGACAGGTTACCTGGGCTGCAAACGGTCACAGAAAGTAGTCCCCCACTTGGCTaGCATTTCTTCCTAGTAAGG +
Preference number: 2 (lower is better)
Translates to: MLAFPLDRLPGLQTVTESSPPLG*HFFLVR
Trigger: CCTTACTAGGAAGAAATGGCAGCCAAGTGGGGGACT...ACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GCTGTGTGTTCACAAGGATACAAACACCACACGGCATGTGCTAGTAGGGCTGCTAATCAGAAAGGCAGCTaGCGCTCCAGGGTCTCAAAT +
Preference number: 2 (lower is better)
Translates to: AVCSQGYKHHTACASRAANQKGS*RSRVSN
Trigger: ATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT...AGCAGCCCTACTAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACACACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGAAGAGAACATCCAACTaGCAGAGACAGAGGGGAACC +
Preference number: 2 (lower is better)
Translates to: YCACHLGKAQAGRYIATQKRTSN*QRQRGT
Trigger: GGTTCCCCTCTGTCTCTGGCAGTTGGATGTTCTCTT...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCAAGCCTGGAAGCGGACTaGCTGTGTGTTCACAAGGAT +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPSLEAD*LCVHKD
Trigger: ATCCTTGTGAACACACAGCCAGTCCGCTTCCAGGCT...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTTCCTGGACAACCTTGCTTCCACTTTCCCTCCCACCAGTGCTTAAGTCTCAGTAGCCTGGAAGCGGACTaGCTGTGTGTTCACAAGGAT +
Preference number: 2 (lower is better)
Translates to: FPGQPCFHFPSHQCLSLSSLEAD*LCVHKD
Trigger: ATCCTTGTGAACACACAGCCAGTCCGCTTCCAGGCT...ACTGAGACTTAAGCACTGGTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTGTGGAACCCAGGAGATAGTGGTTGGGCTGCACTGAAGGCAAATCAATGGCATAGCCTGGAAGCGGACTaGCTGTGTGTTCACAAGGAT +
Preference number: 2 (lower is better)
Translates to: LWNPGDSGWAALKANQWHSLEAD*LCVHKD
Trigger: ATCCTTGTGAACACACAGCCAGTCCGCTTCCAGGCT...ATGCCATTGATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGGGTTCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCCAGAGGAACAAAGCCTaGAAGCGGACTGGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTQRNKA*KRTGCV
Trigger: CACACAGCCAGTCCGCTTCCAGGCTTTGTTCCTCTG...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACACAAGAGCCAGTGCGGGGTaGTTGGTGCCCAGAGCTGTA +
Preference number: 2 (lower is better)
Translates to: SSWNRKQTILASPASQYTRASAG*LVPRAV
Trigger: TACAGCTCTGGGCACCAACCACCCCGCACTGGCTCT...TGTGTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AGCATTAATGTTAGCCTTCCCCTTGGACAGGTTACCTGGGCTGCAAACGGTCACCTTGCCACCCTTTCCTaGACAACCTTGCTTCCACTT +
Preference number: 2 (lower is better)
Translates to: SINVSLPLGQVTWAANGHLATLS*TTLLPL
Trigger: AAGTGGAAGCAAGGTTGTCCAGGAAAGGGTGGCAAG...GTGACCGTTTGCAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACATTAATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CTGGGCAAACGGGATAATGGAAGTACATGGTCTCCCCAGCTGGCTAGCTGGCTATCAAGCATAATATATTaGGCAACCTGTAGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: LGKRDNGSTWSPQLASWLSSIIY*ATCRGP
Trigger: GGGACCCCTACAGGTTGCCCAATATATTATGCTTGA...TAGCCAGCTAGCCAGCTGGGGAGACCATGTACTTCCATTATCCCGTTTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TCACATTTTGCTGTGGAGACTGTAGGAAGAAGCACGGGTGTGAGCTGGCTGAGCTTCCTCAAGGTGGACTaGTGTTGGTCCTTCTCAACA +
Preference number: 2 (lower is better)
Translates to: SHFAVETVGRSTGVSWLSFLKVD*CWSFST
Trigger: TGTTGAGAAGGACCAACACCAGTCCACCTTGAGGAA...GCTCAGCCAGCTCACACCCGTGCTTCTTCCTACAGTCTCCACAGCAAAATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGCCCTCTTCCTCAAGGTaGACTGGTGTTGGTCCTTCT +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLPSSSR*TGVGPS
Trigger: AGAAGGACCAACACCAGTCCACCTTGAGGAAGAGGG...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGACCCTCTTCCTCAAGGTaGACTGGTGTTGGTCCTTCT +
Preference number: 2 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGPSSSR*TGVGPS
Trigger: AGAAGGACCAACACCAGTCCACCTTGAGGAAGAGGG...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGACTTGGACAGGTTACCTaGGCTGCAAACGGTCACAGA +
Preference number: 2 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGLGQVT*AANGHR
Trigger: TCTGTGACCGTTTGCAGCCCAGGTAACCTGTCCAAG...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AGGCTTGGATTTCCTGCAAAGCACCTAACACATGAAGACAGTCTCTGGGCAAGCCTTGGACAGGTTACCTaGGCTGCAAACGGTCACAGA +
Preference number: 2 (lower is better)
Translates to: RLGFPAKHLTHEDSLWASLGQVT*AANGHR
Trigger: TCTGTGACCGTTTGCAGCCCAGGTAACCTGTCCAAG...GCTTGCCCAGAGACTGTCTTCATGTGTTAGGTGCTTTGCAGGAAATCCAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CTGGGCAAACGGGATAATGGAAGTACATGGTCTCCCCAGCTGGCTAGCTGGCTACACAGGACAAATCTGTaGACAATGAAATGGGAGAGC +
Preference number: 2 (lower is better)
Translates to: LGKRDNGSTWSPQLASWLHRTNL*TMKWES
Trigger: GCTCTCCCATTTCATTGTCCACAGATTTGTCCTGTG...TAGCCAGCTAGCCAGCTGGGGAGACCATGTACTTCCATTATCCCGTTTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTGTGTGTTCACAAGGATACAAACACCACACGGCATGTGCTAGTAGGGCTGCTCCAGGAGATAGTGGTTaGGCTGCACTGAAGGCAAAT +
Preference number: 2 (lower is better)
Translates to: AVCSQGYKHHTACASRAAPGDSG*AALKAN
Trigger: ATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGG...AGCAGCCCTACTAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACACACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGGGGGAACCTAAGGCTTaGATTTCCTGCAAAGCACCT +
Preference number: 2 (lower is better)
Translates to: YCACHLGKAQAGRYIATQGEPKA*ISCKAP
Trigger: AGGTGCTTTGCAGGAAATCCAAGCCTTAGGTTCCCC...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp ATGTTAGCCTTCCCCTTGGACAGGTTACCTGGGCTGCAAACGGTCACAGAAAGTAACCTCAGCATTCAGTaGAAAGGGAATGGGGGTAAG +
Preference number: 2 (lower is better)
Translates to: MLAFPLDRLPGLQTVTESNLSIQ*KGNGGK
Trigger: CTTACCCCCATTCCCTTTTCACTGAATGCTGAGGTT...ACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGAGCCCCCTGTACTCCCTaGGCAGAGCAGCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: QGLKSIKTTTEQLKQSERAPCTP*AEQPAS
Trigger: GGAGGCTGGCTGCTCTGCTCAGGGAGTACAGGGGGC...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCACAGAAGGCAGTAGCTaGGTCTTCAGGGCAAGCTGT +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTTEGSS*VFRASC
Trigger: ACAGCTTGCCCTGAAGACTCAGCTACTGCCTTCTGT...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AAGAACTGGCTGGCCTGGCACCCGGGAACAGTAGCTATCTGGCTCTTCACCCAAAAATTAATAACAACATaGGGTCTCCTCAAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: KNWLAWHPGTVAIWLFTQKLITT*GLLKPQ
Trigger: TTGGGGCTTGAGGAGACCGCATGTTGTTATTAATTT...TTGGGTGAAGAGCCAGATAGCTACTGTTCCCGGGTGCCAGGCCAGCCAGTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCGCTTCCCTGCAGGGCTaGTTCAGGAAGAACCACAAA +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTASLQG*FRKNHK
Trigger: TTTGTGGTTCTTCCTGAAGCAGCCCTGCAGGGAAGC...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACACAAGCCACCTTTGGTTCTaGTTCTGCCTCTGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: SSWNRKQTILASPASQYTSHLWF*FCLWPP
Trigger: AGGGGGCCAGAGGCAGAAGCAGAACCAAAGGTGGCT...TGTGTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAAGTACTGCCCGCCTaGCCTCCCTCCCTCCGTGAT +
Preference number: 2 (lower is better)
Translates to: PLQGLKSIKTTTEQLKQSEVLPA*PPSLRD
Trigger: ATCACGGAGGGAGGGAGGGCAGGCGGGCAGTACTTC...TGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCTATATTGCCACTCAGTaGACCGATGGCCTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTYIATQ*TDGLLW
Trigger: CCAGAGGAGGCCATCGGTGCACTGAGTGGCAATATA...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGGTCAAAAATCCTCCCTaGAGCCTCTGCTCTTCACAG +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLVKNPP*SLCSSQ
Trigger: CTGTGAAGAGCAGAGGCTGCAGGGAGGATTTTTGAC...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCATTTCCCTCCCACCAGTaGTTAAGTCTCAGTGGGATC +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPFPSHQ*LSLSGI
Trigger: GATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCATTTCCTGGACAACCTTaGTTCCACTTTCCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPFPGQP*FHFPSH
Trigger: GTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TTTCCTGGACAACCTTGCTTCCACTTTCCCTCCCACCAGTGCTTAAGTCTCAGTTTTCCTGGACAACCTTaGTTCCACTTTCCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: FPGQPCFHFPSHQCLSLSFPGQP*FHFPSH
Trigger: GTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA...ACTGAGACTTAAGCACTGGTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AGGCTTGGATTTCCTGCAAAGCACCTAACACATGAAGACAGTCTCTGGGCAAGCCCAGAGCAGAAACTGTaGTGGAGTTCCTTCAACACC +
Preference number: 2 (lower is better)
Translates to: RLGFPAKHLTHEDSLWASPEQKL*WSSFNT
Trigger: GGTGTTGAAGGAACTCCAGCACAGTTTCTGCTCTGG...GCTTGCCCAGAGACTGTCTTCATGTGTTAGGTGCTTTGCAGGAAATCCAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGCCAGAGCAGAAACTGTaGTGGAGTTCCTTCAACACC +
Preference number: 2 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRPEQKL*WSSFNT
Trigger: GGTGTTGAAGGAACTCCAGCACAGTTTCTGCTCTGG...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAGTCCCCCACTTGGCTaGCATTTCTTCCTAGTAAGG +
Preference number: 2 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRSPPLG*HFFLVR
Trigger: CCTTACTAGGAAGAAATGGCAGCCAAGTGGGGGACT...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGAGTCCCCCACTTGGCTaGCATTTCTTCCTAGTAAGG +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLSPPLG*HFFLVR
Trigger: CCTTACTAGGAAGAAATGGCAGCCAAGTGGGGGACT...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GATGGTCAATCCCTGTTTGTTATCCACAGGGACAGCATGACAAGGAGAGTCCCTCTTCAGGGCAAGCTGTaGCAGAAGATCTTCTCACTC +
Preference number: 2 (lower is better)
Translates to: DGQSLFVIHRDSMTRRVPLQGKL*QKIFSL
Trigger: GAGTGAGAAGATCTTCTGGCACAGCTTGCCCTGAAG...AGGGACTCTCCTTGTCATGCTGTCCCTGTGGATAACAAACAGGGATTGACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068747.14
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp ATGTTAGCCTTCCCCTTGGACAGGTTACCTGGGCTGCAAACGGTCACAGAAAGTCACAGCTCTCGCCTCTaGCAATTCACAGCATTAATG +
Preference number: 2 (lower is better)
Translates to: MLAFPLDRLPGLQTVTESHSSRL*QFTALM
Trigger: CATTAATGCTGTGAATTGGCAGAGGCGAGAGCTGTG...ACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACACATCCCCCACTGAGACCTaGAGGCCACCACAAAGAGTG +
Preference number: 2 (lower is better)
Translates to: SSWNRKQTILASPASQYTSPTET*RPPQRV
Trigger: CACTCTTTGTGGTGGCCTCCAGGTCTCAGTGGGGGA...TGTGTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTATCTGGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCCTTACCCCAACTCTCCCCCACTGAGACCTaGAGGCCACCACAAAGAGTG +
Preference number: 2 (lower is better)
Translates to: AIWLFTQFKNSFLPLPQLSPTET*RPPQRV
Trigger: CACTCTTTGTGGTGGCCTCCAGGTCTCAGTGGGGGA...GAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACAGGTTACCTGGGCTGCAAACGGTCACAGAAAGTCAGTAGTTTCAATCATACATCCCCCACTGAGACCTaGAGGCCACCACAAAGAGTG +
Preference number: 2 (lower is better)
Translates to: TGYLGCKRSQKVSSFNHTSPTET*RPPQRV
Trigger: CACTCTTTGTGGTGGCCTCCAGGTCTCAGTGGGGGA...TGTATGATTGAAACTACTGACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GAAGGTGATACATACGAAGGTGTGAAGAAACAGCAGGAAACATGCACAACTTGTAGAGCCAGTGCGGGGTaGTTGGTGCCCAGAGCTGTA +
Preference number: 2 (lower is better)
Translates to: EGDTYEGVKKQQETCTTCRASAG*LVPRAV
Trigger: TACAGCTCTGGGCACCAACCACCCCGCACTGGCTCT...ACAAGTTGTGCATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTATCACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTTCCTGGACAACCTTGCTTCCACTTTCCCTCCCACCAGTGCTTAAGTCTCAGTCTTGCCACCCTTTCCTaGACAACCTTGCTTCCACTT +
Preference number: 2 (lower is better)
Translates to: FPGQPCFHFPSHQCLSLSLATLS*TTLLPL
Trigger: AAGTGGAAGCAAGGTTGTCCAGGAAAGGGTGGCAAG...ACTGAGACTTAAGCACTGGTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTGTGTGTTCACAAGGATACAAACACCACACGGCATGTGCTAGTAGGGCTGCTCTTAAGTCCCCCACTTaGCTGCCATTTCTTCCTAGT +
Preference number: 2 (lower is better)
Translates to: AVCSQGYKHHTACASRAALKSPT*LPFLPS
Trigger: ACTAGGAAGAAATGGCAGCCAAGTGGGGGACTTAAG...AGCAGCCCTACTAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACACACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CTGGGCAAACGGGATAATGGAAGTACATGGTCTCCCCAGCTGGCTAGCTGGCTAAAACCCCTCAGGATATaGCACCTAAACTCCAAAGTA +
Preference number: 2 (lower is better)
Translates to: LGKRDNGSTWSPQLASWLKPLRI*HLNSKV
Trigger: TACTTTGGAGTTTAGGTGCCATATCCTGAGGGGTTT...TAGCCAGCTAGCCAGCTGGGGAGACCATGTACTTCCATTATCCCGTTTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAGCCCAGAGGCTATGTaGGACACTGGCAAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: YPQVFPELLLESKANYIGSPEAM*DTGKGW
Trigger: CCAGCCTTTGCCAGTGTCCCACATAGCCTCTGGGCT...GCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGCCAGGAGATAGTGGTTaGGCTGCACTGAAGGCAAAT +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLPGDSG*AALKAN
Trigger: ATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGG...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGTTTGGACGATGTACTTaGCGCCACATCGACATGCTT +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLFGRCT*RHIDML
Trigger: AAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAA...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGATTTGGACGATGTACTTaGCGCCACATCGACATGCTT +
Preference number: 2 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGFGRCT*RHIDML
Trigger: AAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAA...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCAAACCTCAGCATTCAGTaGAAAGGGAATGGGGGTAAG +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPNLSIQ*KGNGGK
Trigger: CTTACCCCCATTCCCTTTTCACTGAATGCTGAGGTT...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTAGGCGCTGGCATCCTACCACCCCTTCCAGGACCTTAAGCAGCATACTTAAGATACATACGAAGGTGTaGAGAAACAGCAGGAAACAT +
Preference number: 2 (lower is better)
Translates to: ARRWHPTTPSRTLSSILKIHTKV*RNSRKH
Trigger: ATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTAT...CTTAAGTATGCTGCTTAAGGTCCTGGAAGGGGTGGTAGGATGCCAGCGCCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCGGCCACCACAAAGAGTaGCAGTCTAAGTGCACAGGC +
Preference number: 2 (lower is better)
Translates to: YPQVFPELLLESKANYIGGHHKE*QSKCTG
Trigger: GCCTGTGCACTTAGACTGTCACTCTTTGTGGTGGCC...GCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGTCCCCAAGACCCTaGGGCTGGATGGTGCTACAA +
Preference number: 2 (lower is better)
Translates to: YPQVFPELLLESKANYIGKSPRP*GWMVLQ
Trigger: TTGTAGCACCATCCAGCCTCAGGGTCTTGGGGACTT...GCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCACAGGCAGAGAGTGGATaGTGCCAGACCGTGCTTCTC +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSQAESG*CQTVLL
Trigger: GAGAAGCACGGTCTGGCATCATCCACTCTCTGCCTG...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCGGTTTAAGCTTCCAATaGCCCAGGAACCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: YPQVFPELLLESKANYIGGLSFQ*PRNPGP
Trigger: AGGGCCTGGGTTCCTGGGTCATTGGAAGCTTAAACC...GCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TTTCCTGGACAACCTTGCTTCCACTTTCCCTCCCACCAGTGCTTAAGTCTCAGTGACGCCACATCGACATaGTTTAGGCACAACGATGAA +
Preference number: 2 (lower is better)
Translates to: FPGQPCFHFPSHQCLSLSDATST*FRHNDE
Trigger: TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC...ACTGAGACTTAAGCACTGGTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CATATATTTATAGGGCTACCTCTGCTCAGATGCACATTCCCACAGCTTCTCTTAACCCTAGGGCTTCCCTaGAGGGCTGCTTCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: HIFIGLPLLRCTFPQLLLTLGLP*RAASGR
Trigger: TCTTCCTGAAGCAGCCCTGCAGGGAAGCCCTAGGGT...TAAGAGAAGCTGTGGGAATGTGCATCTGAGCAGAGGTAGCCCTATAAATATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCAACCCTAGGGCTTCCCTaGAGGGCTGCTTCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSTLGLP*RAASGR
Trigger: TCTTCCTGAAGCAGCCCTGCAGGGAAGCCCTAGGGT...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp ACAGGGGAAAGTTCAAAAGGACATGAAGGACACCAAGAGAACATCCAACTGCCATATATTGCCACTCAGTaGACCGATGGCCTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: TGESSKGHEGHQENIQLPYIATQ*TDGLLW
Trigger: CCAGAGGAGGCCATCGGTGCACTGAGTGGCAATATA...TGGCAGTTGGATGTTCTCTTGGTGTCCTTCATGTCCTTTTGAACTTTCCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACTATATTGCCACTCAGTaGACCGATGGCCTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: SSSWNRKQTILASPASQYYIATQ*TDGLLW
Trigger: CCAGAGGAGGCCATCGGTGCACTGAGTGGCAATATA...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCGGCAGGCAGGTATATTaGCACTCAGTGCACCGATGG +
Preference number: 2 (lower is better)
Translates to: YPQVFPELLLESKANYIGGRQVY*HSVHRW
Trigger: CCATCGGTGCACTGAGTGGCAATATACCTGCCTGCC...GCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GCTATCTGGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCCTTACCCCAACTCGGCAGGCAGGTATATTaGCACTCAGTGCACCGATGG +
Preference number: 2 (lower is better)
Translates to: AIWLFTQFKNSFLPLPQLGRQVY*HSVHRW
Trigger: CCATCGGTGCACTGAGTGGCAATATACCTGCCTGCC...GAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp ACAGAGGGGAACCTAAGGCTTGGATTTCCTGCAAAGCACCTAACACATGAAGACGTCAAAAATCCTCCCTaGAGCCTCTGCTCTTCACAG +
Preference number: 2 (lower is better)
Translates to: TEGNLRLGFPAKHLTHEDVKNPP*SLCSSQ
Trigger: CTGTGAAGAGCAGAGGCTGCAGGGAGGATTTTTGAC...GTCTTCATGTGTTAGGTGCTTTGCAGGAAATCCAAGCCTTAGGTTCCCCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCTTTCCTGGACAACCTTaGTTCCACTTTCCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTFPGQP*FHFPSH
Trigger: GTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCAGACAGAGGCGCTCTGTaGAGTCAGACTGTGGGCACA +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSDRGAL*SQTVGT
Trigger: TGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTC...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GAAGGTGATACATACGAAGGTGTGAAGAAACAGCAGGAAACATGCACAACTTGTGACAGAGGCGCTCTGTaGAGTCAGACTGTGGGCACA +
Preference number: 2 (lower is better)
Translates to: EGDTYEGVKKQQETCTTCDRGAL*SQTVGT
Trigger: TGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTC...ACAAGTTGTGCATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTATCACCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGAGACCGCAGCACCTCCTaGCGACAGAGGCGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: QGLKSIKTTTEQLKQSERDRSTS*RQRRSV
Trigger: CACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTC...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CTGACCATGGCTCTGCTGGGGCAAGTGCTCCTTTTAGAAATCACAAGTAGGTATTGGGATTCTGAGCAGTaGCTGCCCAACCTAGCATTT +
Preference number: 2 (lower is better)
Translates to: LTMALLGQVLLLEITSRYWDSEQ*LPNLAF
Trigger: AAATGCTAGGTTGGGCAGGCACTGCTCAGAATCCCA...ATACCTACTTGTGATTTCTAAAAGGAGCACTTGCCCCAGCAGAGCCATGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCTGGGATTCTGAGCAGTaGCTGCCCAACCTAGCATTT +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTWDSEQ*LPNLAF
Trigger: AAATGCTAGGTTGGGCAGGCACTGCTCAGAATCCCA...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGGAAGAGACAGGGATTTaGACGATGTACTTGACGCCA +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLEETGI*TMYLTP
Trigger: TGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GATGGTCAATCCCTGTTTGTTATCCACAGGGACAGCATGACAAGGAGAGTCCCTGAAGAGACAGGGATTTaGACGATGTACTTGACGCCA +
Preference number: 2 (lower is better)
Translates to: DGQSLFVIHRDSMTRRVPEETGI*TMYLTP
Trigger: TGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC...AGGGACTCTCCTTGTCATGCTGTCCCTGTGGATAACAAACAGGGATTGACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCATTCTGCTTCTGCCTCTaGCCCCCTGTACTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSFCFCL*PPVLPE
Trigger: CTCAGGGAGTACAGGGGGCCAGAGGCAGAAGCAGAA...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACACCGATGGCCTCCTCTaGGTAATCAGAAGTACTGCC +
Preference number: 2 (lower is better)
Translates to: SSSWNRKQTILASPASQYTDGLL*VIRSTA
Trigger: GGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGT...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAAGAGCCAGTGCGGGGTaGTTGGTGCCCAGAGCTGTA +
Preference number: 2 (lower is better)
Translates to: PLQGLKSIKTTTEQLKQSRASAG*LVPRAV
Trigger: TACAGCTCTGGGCACCAACCACCCCGCACTGGCTCT...TGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCAAACCAAAGAACTGGCTaGCCTGGCACCCGGGAACAG +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSNQRTG*PGTREQ
Trigger: CTGTTCCCGGGTGCCAGGCCAGCCAGTTCTTTGGTT...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GAAGGTGATACATACGAAGGTGTGAAGAAACAGCAGGAAACATGCACAACTTGTAACCAAAGAACTGGCTaGCCTGGCACCCGGGAACAG +
Preference number: 2 (lower is better)
Translates to: EGDTYEGVKKQQETCTTCNQRTG*PGTREQ
Trigger: CTGTTCCCGGGTGCCAGGCCAGCCAGTTCTTTGGTT...ACAAGTTGTGCATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTATCACCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCCTTGCCACCCTTTCCTaGACAACCTTGCTTCCACTT +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTLATLS*TTLLPL
Trigger: AAGTGGAAGCAAGGTTGTCCAGGAAAGGGTGGCAAG...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGTCAAGCATAATATATTaGGCAACCTGTAGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: YCACHLGKAQAGRYIATQSSIIY*ATCRGP
Trigger: GGGACCCCTACAGGTTGCCCAATATATTATGCTTGA...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTTCCTGGACAACCTTGCTTCCACTTTCCCTCCCACCAGTGCTTAAGTCTCAGTCTTAAGTCCCCCACTTaGCTGCCATTTCTTCCTAGT +
Preference number: 2 (lower is better)
Translates to: FPGQPCFHFPSHQCLSLSLKSPT*LPFLPS
Trigger: ACTAGGAAGAAATGGCAGCCAAGTGGGGGACTTAAG...ACTGAGACTTAAGCACTGGTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGACTTAAGTCCCCCACTTaGCTGCCATTTCTTCCTAGT +
Preference number: 2 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGLKSPT*LPFLPS
Trigger: ACTAGGAAGAAATGGCAGCCAAGTGGGGGACTTAAG...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACACATGTGCAGTCAGACTGTaGGCACACAGCAGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: SSWNRKQTILASPASQYTCAVRL*AHSRLS
Trigger: AGAGAGCCTGCTGTGTGCCCACAGTCTGACTGCACA...TGTGTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AAGCTAAGACACCTCACCCACTCACCCACCCCGTACCTCATTAGACTTAGTTCTAAGGTGGACTGGTGTTaGTCCTTCTCAACAAACTGG +
Preference number: 2 (lower is better)
Translates to: KLRHLTHSPTPYLIRLSSKVDWC*SFSTNW
Trigger: CCAGTTTGTTGAGAAGGACCAACACCAGTCCACCTT...AGAACTAAGTCTAATGAGGTACGGGGTGGGTGAGTGGGTGAGGTGTCTTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACCCCTCTTCCTCAAGGTaGACTGGTGTTGGTCCTTCT +
Preference number: 2 (lower is better)
Translates to: SSSWNRKQTILASPASQYPSSSR*TGVGPS
Trigger: AGAAGGACCAACACCAGTCCACCTTGAGGAAGAGGG...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTTCCCTTAATCAGATaGCTTCTTGACTGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPLPLIR*LLDCSA
Trigger: GGCAGAGCAGTCAAGAAGCCATCTGATTAAGGGAAG...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAACTGGCAGCTCCCTGTaGAGCACAGCTCTCGCCTCT +
Preference number: 2 (lower is better)
Translates to: PLQGLKSIKTTTEQLKQSTGSSL*STALAS
Trigger: AGAGGCGAGAGCTGTGCTCCACAGGGAGCTGCCAGT...TGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TACATCCAAACAGAGAGAGAGAACAGGACACTCACTGTATGCAGCCCTGAAATGCATGAAGACAGTCTCTaGGCAAGCAGGGTCTCAGCA +
Preference number: 2 (lower is better)
Translates to: YIQTERENRTLTVCSPEMHEDSL*ASRVSA
Trigger: TGCTGAGACCCTGCTTGCCCAGAGACTGTCTTCATG...CATTTCAGGGCTGCATACAGTGAGTGTCCTGTTCTCTCTCTCTGTTTGGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCGGGGAACCTAAGGCTTaGATTTCCTGCAAAGCACCT +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTGEPKA*ISCKAP
Trigger: AGGTGCTTTGCAGGAAATCCAAGCCTTAGGTTCCCC...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CAA 90 bp TCAAGCATCAGAGAAGCTGAAGAGACAGGGATTTGGACGATGTACTaGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGG +
Preference number: 2 (lower is better)
Translates to: SSIREAEETGIWTMY*TPHRHALGTTMNKR
Trigger: CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTCAGCTTCTCTGATGCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGACACAAGGTCAAAGGTaGGAGTTCAAGCATCAGAGA +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLTQGQR*EFKHQR
Trigger: TCTCTGATGCTTGAACTCTCACCTTTGACCTTGTGT...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TTGTGGAACCCAGGAGATAGTGGTTGGGCTGCACTGAAGGCAAATCAATGGCATCTAGTAGGGCTGCTCTaGGACAGTTACAAAGAATTG +
Preference number: 2 (lower is better)
Translates to: LWNPGDSGWAALKANQWHLVGLL*DSYKEL
Trigger: CAATTCTTTGTAACTGTCTCAGAGCAGCCCTACTAG...ATGCCATTGATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGGGTTCCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGCTAGTAGGGCTGCTCTaGGACAGTTACAAAGAATTG +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLLVGLL*DSYKEL
Trigger: CAATTCTTTGTAACTGTCTCAGAGCAGCCCTACTAG...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CTGACCATGGCTCTGCTGGGGCAAGTGCTCCTTTTAGAAATCACAAGTAGGTATAACCTCAGCATTCAGTaGAAAGGGAATGGGGGTAAG +
Preference number: 2 (lower is better)
Translates to: LTMALLGQVLLLEITSRYNLSIQ*KGNGGK
Trigger: CTTACCCCCATTCCCTTTTCACTGAATGCTGAGGTT...ATACCTACTTGTGATTTCTAAAAGGAGCACTTGCCCCAGCAGAGCCATGGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TGTGTGTACAACAATCACATTCTGGATTCTACAAAATCCTGGCCTTTTCCAGAGCAGGCAGAGAGTGGATaGTGCCAGACCGTGCTTCTC +
Preference number: 2 (lower is better)
Translates to: CVYNNHILDSTKSWPFPEQAESG*CQTVLL
Trigger: GAGAAGCACGGTCTGGCATCATCCACTCTCTGCCTG...CTCTGGAAAAGGCCAGGATTTTGTAGAATCCAGAATGTGATTGTTGTACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp ACAGGTTACCTGGGCTGCAAACGGTCACAGAAAGTCAGTAGTTTCAATCATACATCCACAGGGACAGCATaGCAAGGAGAGTCCCTATCT +
Preference number: 2 (lower is better)
Translates to: TGYLGCKRSQKVSSFNHTSTGTA*QGESLS
Trigger: AGATAGGGACTCTCCTTGTCATGCTGTCCCTGTGGA...TGTATGATTGAAACTACTGACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTATCTGGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCCTTACCCCAACTCTCCACAGGGACAGCATaGCAAGGAGAGTCCCTATCT +
Preference number: 2 (lower is better)
Translates to: AIWLFTQFKNSFLPLPQLSTGTA*QGESLS
Trigger: AGATAGGGACTCTCCTTGTCATGCTGTCCCTGTGGA...GAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCAAAGCACCTAACACATaGAGACAGTCTCTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTKAPNT*RQSLGK
Trigger: CTTGCCCAGAGACTGTCTTCATGTGTTAGGTGCTTT...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAACCCTAGGGCTTCCCTaGAGGGCTGCTTCAGGAAGA +
Preference number: 2 (lower is better)
Translates to: PLQGLKSIKTTTEQLKQSTLGLP*RAASGR
Trigger: TCTTCCTGAAGCAGCCCTGCAGGGAAGCCCTAGGGT...TGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CACTGGCAAAGGCTGGAGTTAAGACCCATGAAAGGCAGCAGGGAGCTTACTGTAGAAAGCATCACATTTTaGTGTGGAGACTGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: HWQRLELRPMKGSRELTVESITF*CGDCRK
Trigger: CTTCCTACAGTCTCCACAGCAAAATGTGATGCTTTC...TACAGTAAGCTCCCTGCTGCCTTTCATGGGTCTTAACTCCAGCCTTTGCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCACTTTGGTTCTGCTTCTaGCTCTGGCCCCCTGTACTC +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSLWFCF*LWPPVL
Trigger: GAGTACAGGGGGCCAGAGGCAGAAGCAGAACCAAAG...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GTTTTATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATAGCCACCTTTGGTTCTaGTTCTGCCTCTGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: VLSTGFPRAPLGIESKLYSHLWF*FCLWPP
Trigger: AGGGGGCCAGAGGCAGAAGCAGAACCAAAGGTGGCT...ATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGAGAAGTACTGCCCGCCTaGCCTCCCTCCCTCCGTGAT +
Preference number: 2 (lower is better)
Translates to: QGLKSIKTTTEQLKQSEREVLPA*PPSLRD
Trigger: ATCACGGAGGGAGGGAGGGCAGGCGGGCAGTACTTC...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCAGGCAGGCAGGTATATTaGCACTCAGTGCACCGATGG +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSGRQVY*HSVHRW
Trigger: CCATCGGTGCACTGAGTGGCAATATACCTGCCTGCC...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACTTTCCTGGACAACCTTaGTTCCACTTTCCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: SSSWNRKQTILASPASQYFPGQP*FHFPSH
Trigger: GTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCTCCTTTGCTGCACCTTaGCACCCTTTCCTGGACAAC +
Preference number: 2 (lower is better)
Translates to: YPQVFPELLLESKANYIGSFAAP*HPFLDN
Trigger: GTTGTCCAGGAAAGGGTGGCAAGGTGCAGCAAAGGA...GCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGATGATGCCAGACCGTaGTTCTCTCCCCACCCCCAT +
Preference number: 2 (lower is better)
Translates to: PLQGLKSIKTTTEQLKQSDDARP*FSPHPH
Trigger: ATGGGGGTGGGGAGAGAAGCACGGTCTGGCATCATC...TGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GTTTTATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATGATGATGCCAGACCGTaGTTCTCTCCCCACCCCCAT +
Preference number: 2 (lower is better)
Translates to: VLSTGFPRAPLGIESKLYDDARP*FSPHPH
Trigger: ATGGGGGTGGGGAGAGAAGCACGGTCTGGCATCATC...ATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACCCAGAGCAGAAACTGTaGTGGAGTTCCTTCAACACC +
Preference number: 2 (lower is better)
Translates to: SSSWNRKQTILASPASQYPEQKL*WSSFNT
Trigger: GGTGTTGAAGGAACTCCAGCACAGTTTCTGCTCTGG...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACAGTCCCCCACTTGGCTaGCATTTCTTCCTAGTAAGG +
Preference number: 2 (lower is better)
Translates to: SSSWNRKQTILASPASQYSPPLG*HFFLVR
Trigger: CCTTACTAGGAAGAAATGGCAGCCAAGTGGGGGACT...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TACATCCAAACAGAGAGAGAGAACAGGACACTCACTGTATGCAGCCCTGAAATGAAGAGAACATCCAACTaGCAGAGACAGAGGGGAACC +
Preference number: 2 (lower is better)
Translates to: YIQTERENRTLTVCSPEMKRTSN*QRQRGT
Trigger: GGTTCCCCTCTGTCTCTGGCAGTTGGATGTTCTCTT...CATTTCAGGGCTGCATACAGTGAGTGTCCTGTTCTCTCTCTCTGTTTGGATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCAGGACACTCACTGTATaGAGCCCTGAAATGAGGAGA +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTRTLTV*SPEMRR
Trigger: TCTCCTCATTTCAGGGCTGCATACAGTGAGTGTCCT...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TTATGGGAACACAGCTTTTGGAGTACCTTCATTAAGGAATCAGAAATGCACTTCCTTCAGGGCAAGCTGTaGCTGCGAGAGTGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: LWEHSFWSTFIKESEMHFLQGKL*LREWQG
Trigger: TCCCTGCCACTCTCGCAGGCACAGCTTGCCCTGAAG...GAAGTGCATTTCTGATTCCTTAATGAAGGTACTCCAAAAGCTGTGTTCCCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000068726.13
ENSMUST00000111452.8
3UTR-3UTR CCA 90 bp CTAGTCATGGGTATCTCCCTCCTATTTGCATATTTCAGGCTAACTGAAAAGTGCCAGAGGAACAAAGCCTaGAAGCGGACTGGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: LVMGISLLFAYFRLTEKCQRNKA*KRTGCV
Trigger: CACACAGCCAGTCCGCTTCCAGGCTTTGTTCCTCTG...GCACTTTTCAGTTAGCCTGAAATATGCAAATAGGAGGGAGATACCCATGACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCACAGAGGAACAAAGCCTaGAAGCGGACTGGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSQRNKA*KRTGCV
Trigger: CACACAGCCAGTCCGCTTCCAGGCTTTGTTCCTCTG...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCATCCCCCACTGAGACCTaGAGGCCACCACAAAGAGTG +
Preference number: 2 (lower is better)
Translates to: PLQGLKSIKTTTEQLKQSSPTET*RPPQRV
Trigger: CACTCTTTGTGGTGGCCTCCAGGTCTCAGTGGGGGA...TGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTTTTATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTCCCCCACTGAGACCTaGAGGCCACCACAAAGAGTG +
Preference number: 2 (lower is better)
Translates to: VLSTGFPRAPLGIESKLYSPTET*RPPQRV
Trigger: CACTCTTTGTGGTGGCCTCCAGGTCTCAGTGGGGGA...ATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTATCTGGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCCTTACCCCAACTCACCGATGGCCTCCTCTaGGTAATCAGAAGTACTGCC +
Preference number: 2 (lower is better)
Translates to: AIWLFTQFKNSFLPLPQLTDGLL*VIRSTA
Trigger: GGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGT...GAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACAGGTTACCTGGGCTGCAAACGGTCACAGAAAGTCAGTAGTTTCAATCATACAACCGATGGCCTCCTCTaGGTAATCAGAAGTACTGCC +
Preference number: 2 (lower is better)
Translates to: TGYLGCKRSQKVSSFNHTTDGLL*VIRSTA
Trigger: GGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGT...TGTATGATTGAAACTACTGACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAAACCAAAGAACTGGCTaGCCTGGCACCCGGGAACAG +
Preference number: 2 (lower is better)
Translates to: PLQGLKSIKTTTEQLKQSNQRTG*PGTREQ
Trigger: CTGTTCCCGGGTGCCAGGCCAGCCAGTTCTTTGGTT...TGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TGTGTGTACAACAATCACATTCTGGATTCTACAAAATCCTGGCCTTTTCCAGAGAACCAAAGAACTGGCTaGCCTGGCACCCGGGAACAG +
Preference number: 2 (lower is better)
Translates to: CVYNNHILDSTKSWPFPENQRTG*PGTREQ
Trigger: CTGTTCCCGGGTGCCAGGCCAGCCAGTTCTTTGGTT...CTCTGGAAAAGGCCAGGATTTTGTAGAATCCAGAATGTGATTGTTGTACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GAAGGTGATACATACGAAGGTGTGAAGAAACAGCAGGAAACATGCACAACTTGTTGTGCAGTCAGACTGTaGGCACACAGCAGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: EGDTYEGVKKQQETCTTCCAVRL*AHSRLS
Trigger: AGAGAGCCTGCTGTGTGCCCACAGTCTGACTGCACA...ACAAGTTGTGCATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTATCACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTATCTGGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCCTTACCCCAACTCCCCTCTTCCTCAAGGTaGACTGGTGTTGGTCCTTCT +
Preference number: 2 (lower is better)
Translates to: AIWLFTQFKNSFLPLPQLPSSSR*TGVGPS
Trigger: AGAAGGACCAACACCAGTCCACCTTGAGGAAGAGGG...GAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACCTTGATTCAGGCACACCAAGAAGCAGGTCTCTCTTCCCTTAATCAGATGGCTCTTCCCTTAATCAGATaGCTTCTTGACTGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: TLIQAHQEAGLSSLNQMALPLIR*LLDCSA
Trigger: GGCAGAGCAGTCAAGAAGCCATCTGATTAAGGGAAG...AGCCATCTGATTAAGGGAAGAGAGACCTGCTTCTTGGTGTGCCTGAATCAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAAGCCCAGAGGCTATGTaGGACACTGGCAAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: PLQGLKSIKTTTEQLKQSSPEAM*DTGKGW
Trigger: CCAGCCTTTGCCAGTGTCCCACATAGCCTCTGGGCT...TGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTATCTGGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCCTTACCCCAACTCCTTGGACAGGTTACCTaGGCTGCAAACGGTCACAGA +
Preference number: 2 (lower is better)
Translates to: AIWLFTQFKNSFLPLPQLLGQVT*AANGHR
Trigger: TCTGTGACCGTTTGCAGCCCAGGTAACCTGTCCAAG...GAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGTGTGAAGAAACAGACTGGCAGCTCCCTGTaGAGCACAGCTCTCGCCTCT +
Preference number: 2 (lower is better)
Translates to: NYRKQRGEGDTYEGVKKQTGSSL*STALAS
Trigger: AGAGGCGAGAGCTGTGCTCCACAGGGAGCTGCCAGT...CTGTTTCTTCACACCTTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACAGGGGAAAGTTCAAAAGGACATGAAGGACACCAAGAGAACATCCAACTGCCACAACAAAACCATCTTTaGCCTGGGGAGGGAACTGTG +
Preference number: 2 (lower is better)
Translates to: TGESSKGHEGHQENIQLPQQNHL*PGEGTV
Trigger: CACAGTTCCCTCCCCAGGCCAAAGATGGTTTTGTTG...TGGCAGTTGGATGTTCTCTTGGTGTCCTTCATGTCCTTTTGAACTTTCCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TACATCCAAACAGAGAGAGAGAACAGGACACTCACTGTATGCAGCCCTGAAATGGGGGAACCTAAGGCTTaGATTTCCTGCAAAGCACCT +
Preference number: 2 (lower is better)
Translates to: YIQTERENRTLTVCSPEMGEPKA*ISCKAP
Trigger: AGGTGCTTTGCAGGAAATCCAAGCCTTAGGTTCCCC...CATTTCAGGGCTGCATACAGTGAGTGTCCTGTTCTCTCTCTCTGTTTGGATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp ACAGGGGAAAGTTCAAAAGGACATGAAGGACACCAAGAGAACATCCAACTGCCATTTGGACGATGTACTTaGCGCCACATCGACATGCTT +
Preference number: 2 (lower is better)
Translates to: TGESSKGHEGHQENIQLPFGRCT*RHIDML
Trigger: AAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAA...TGGCAGTTGGATGTTCTCTTGGTGTCCTTCATGTCCTTTTGAACTTTCCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCACACAAGGTCAAAGGTaGGAGTTCAAGCATCAGAGA +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTTQGQR*EFKHQR
Trigger: TCTCTGATGCTTGAACTCTCACCTTTGACCTTGTGT...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCCTAGTAGGGCTGCTCTaGGACAGTTACAAAGAATTG +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTLVGLL*DSYKEL
Trigger: CAATTCTTTGTAACTGTCTCAGAGCAGCCCTACTAG...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACAACCTCAGCATTCAGTaGAAAGGGAATGGGGGTAAG +
Preference number: 2 (lower is better)
Translates to: SSSWNRKQTILASPASQYNLSIQ*KGNGGK
Trigger: CTTACCCCCATTCCCTTTTCACTGAATGCTGAGGTT...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp ACAGGGGAAAGTTCAAAAGGACATGAAGGACACCAAGAGAACATCCAACTGCCAAACCTCAGCATTCAGTaGAAAGGGAATGGGGGTAAG +
Preference number: 2 (lower is better)
Translates to: TGESSKGHEGHQENIQLPNLSIQ*KGNGGK
Trigger: CTTACCCCCATTCCCTTTTCACTGAATGCTGAGGTT...TGGCAGTTGGATGTTCTCTTGGTGTCCTTCATGTCCTTTTGAACTTTCCCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGATACATACGAAGGTGTaGAGAAACAGCAGGAAACAT +
Preference number: 2 (lower is better)
Translates to: YCACHLGKAQAGRYIATQIHTKV*RNSRKH
Trigger: ATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTAT...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGATCACGACTTTGAGTTaGTTGAATCCCGTTGTTGCT +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLITTLS*LNPVVA
Trigger: AGCAACAACGGGATTCAATCAACTCAAAGTCGTGAT...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCAATCACGACTTTGAGTTaGTTGAATCCCGTTGTTGCT +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPITTLS*LNPVVA
Trigger: AGCAACAACGGGATTCAATCAACTCAAAGTCGTGAT...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCTATAGCAAAGTGGCTTaGAGTGACCTTGATTCAGGC +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTYSKVA*SDLDSG
Trigger: GCCTGAATCAAGGTCACTTCAAGCCACTTTGCTATA...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TTGTGGAACCCAGGAGATAGTGGTTGGGCTGCACTGAAGGCAAATCAATGGCATACTTCTGAACCTTCTTaGATACTAGGCTCTGCTCAA +
Preference number: 2 (lower is better)
Translates to: LWNPGDSGWAALKANQWHTSEPS*ILGSAQ
Trigger: TTGAGCAGAGCCTAGTATTCAAGAAGGTTCAGAAGT...ATGCCATTGATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGGGTTCCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTATCTGGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCCTTACCCCAACTCGTCTCCACTCTAAGCTaGGCCCTTTCACATCAAGAC +
Preference number: 2 (lower is better)
Translates to: AIWLFTQFKNSFLPLPQLVSTLS*ALSHQD
Trigger: GTCTTGATGTGAAAGGGCTCAGCTTAGAGTGGAGAC...GAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACACAGTCTCCACTCTAAGCTaGGCCCTTTCACATCAAGAC +
Preference number: 2 (lower is better)
Translates to: SSWNRKQTILASPASQYTVSTLS*ALSHQD
Trigger: GTCTTGATGTGAAAGGGCTCAGCTTAGAGTGGAGAC...TGTGTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GCTGTGTGTTCACAAGGATACAAACACCACACGGCATGTGCTAGTAGGGCTGCTAAATTAATAACAACATaGGGTCTCCTCAAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: AVCSQGYKHHTACASRAAKLITT*GLLKPQ
Trigger: TTGGGGCTTGAGGAGACCGCATGTTGTTATTAATTT...AGCAGCCCTACTAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACACACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCAGAAAGCATCACATTTTaGTGTGGAGACTGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPESITF*CGDCRK
Trigger: CTTCCTACAGTCTCCACAGCAAAATGTGATGCTTTC...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GTTTTATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATCTTTGGTTCTGCTTCTaGCTCTGGCCCCCTGTACTC +
Preference number: 2 (lower is better)
Translates to: VLSTGFPRAPLGIESKLYLWFCF*LWPPVL
Trigger: GAGTACAGGGGGCCAGAGGCAGAAGCAGAACCAAAG...ATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GCTATCTGGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCCTTACCCCAACTCGTCAAAAATCCTCCCTaGAGCCTCTGCTCTTCACAG +
Preference number: 2 (lower is better)
Translates to: AIWLFTQFKNSFLPLPQLVKNPP*SLCSSQ
Trigger: CTGTGAAGAGCAGAGGCTGCAGGGAGGATTTTTGAC...GAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp ACAGGTTACCTGGGCTGCAAACGGTCACAGAAAGTCAGTAGTTTCAATCATACATTTCCCTCCCACCAGTaGTTAAGTCTCAGTGGGATC +
Preference number: 2 (lower is better)
Translates to: TGYLGCKRSQKVSSFNHTFPSHQ*LSLSGI
Trigger: GATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA...TGTATGATTGAAACTACTGACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCTTTCCCTCCCACCAGTaGTTAAGTCTCAGTGGGATC +
Preference number: 2 (lower is better)
Translates to: YPQVFPELLLESKANYIGFPSHQ*LSLSGI
Trigger: GATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA...GCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCTTTCCTGGACAACCTTaGTTCCACTTTCCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: YPQVFPELLLESKANYIGFPGQP*FHFPSH
Trigger: GTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA...GCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp ACAGGTTACCTGGGCTGCAAACGGTCACAGAAAGTCAGTAGTTTCAATCATACATTTCCTGGACAACCTTaGTTCCACTTTCCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: TGYLGCKRSQKVSSFNHTFPGQP*FHFPSH
Trigger: GTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA...TGTATGATTGAAACTACTGACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GAAGGTGATACATACGAAGGTGTGAAGAAACAGCAGGAAACATGCACAACTTGTTCCTTTGCTGCACCTTaGCACCCTTTCCTGGACAAC +
Preference number: 2 (lower is better)
Translates to: EGDTYEGVKKQQETCTTCSFAAP*HPFLDN
Trigger: GTTGTCCAGGAAAGGGTGGCAAGGTGCAGCAAAGGA...ACAAGTTGTGCATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTATCACCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GCTATCTGGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCCTTACCCCAACTCCCAGAGCAGAAACTGTaGTGGAGTTCCTTCAACACC +
Preference number: 2 (lower is better)
Translates to: AIWLFTQFKNSFLPLPQLPEQKL*WSSFNT
Trigger: GGTGTTGAAGGAACTCCAGCACAGTTTCTGCTCTGG...GAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACACACCAGAGCAGAAACTGTaGTGGAGTTCCTTCAACACC +
Preference number: 2 (lower is better)
Translates to: SSWNRKQTILASPASQYTPEQKL*WSSFNT
Trigger: GGTGTTGAAGGAACTCCAGCACAGTTTCTGCTCTGG...TGTGTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GCTATCTGGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCCTTACCCCAACTCAATCAGAAAGGCAGCTaGCGCTCCAGGGTCTCAAAT +
Preference number: 2 (lower is better)
Translates to: AIWLFTQFKNSFLPLPQLNQKGS*RSRVSN
Trigger: ATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT...GAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp ACAGGGGAAAGTTCAAAAGGACATGAAGGACACCAAGAGAACATCCAACTGCCACACAGCTCTCGCCTCTaGCAATTCACAGCATTAATG +
Preference number: 2 (lower is better)
Translates to: TGESSKGHEGHQENIQLPHSSRL*QFTALM
Trigger: CATTAATGCTGTGAATTGGCAGAGGCGAGAGCTGTG...TGGCAGTTGGATGTTCTCTTGGTGTCCTTCATGTCCTTTTGAACTTTCCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACGAAGAGACAGGGATTTaGACGATGTACTTGACGCCA +
Preference number: 2 (lower is better)
Translates to: SSSWNRKQTILASPASQYEETGI*TMYLTP
Trigger: TGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GAAGGTGATACATACGAAGGTGTGAAGAAACAGCAGGAAACATGCACAACTTGTACCGATGGCCTCCTCTaGGTAATCAGAAGTACTGCC +
Preference number: 2 (lower is better)
Translates to: EGDTYEGVKKQQETCTTCTDGLL*VIRSTA
Trigger: GGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGT...ACAAGTTGTGCATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTATCACCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCAACCGATGGCCTCCTCTaGGTAATCAGAAGTACTGCC +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSTDGLL*VIRSTA
Trigger: GGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGT...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTCAGTTTTTGCACAAACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAAGAGCCAGTGCGGGGTaGTTGGTGCCCAGAGCTGTA +
Preference number: 2 (lower is better)
Translates to: VSFCTNYRKQRGEGDTYERASAG*LVPRAV
Trigger: TACAGCTCTGGGCACCAACCACCCCGCACTGGCTCT...TTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTTTGTGCAAAAACTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTTTTATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATGACCCTGAGGCTGGATaGTGCTACAAGAGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: VLSTGFPRAPLGIESKLYDPEAG*CYKRRG
Trigger: CCCTCTTCTCTTGTAGCACCATCCAGCCTCAGGGTC...ATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCAGAAAGCAAACTATATTaGCAAGCCCAGCTTCTCAGT +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPESKLY*QAQLLS
Trigger: ACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTC...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAGAAAGCAAACTATATTaGCAAGCCCAGCTTCTCAGT +
Preference number: 2 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGESKLY*QAQLLS
Trigger: ACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTC...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TACATCCAAACAGAGAGAGAGAACAGGACACTCACTGTATGCAGCCCTGAAATGAAGGTGGACTGGTGTTaGTCCTTCTCAACAAACTGG +
Preference number: 2 (lower is better)
Translates to: YIQTERENRTLTVCSPEMKVDWC*SFSTNW
Trigger: CCAGTTTGTTGAGAAGGACCAACACCAGTCCACCTT...CATTTCAGGGCTGCATACAGTGAGTGTCCTGTTCTCTCTCTCTGTTTGGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ATCAACTTTCTGTTCTGCTCAGCCCTCTCTTTCCATGGTTTGGGGCATGTTCTATTCCTCAAGGTGGACTaGTGTTGGTCCTTCTCAACA +
Preference number: 2 (lower is better)
Translates to: INFLFCSALSFHGLGHVLFLKVD*CWSFST
Trigger: TGTTGAGAAGGACCAACACCAGTCCACCTTGAGGAA...TAGAACATGCCCCAAACCATGGAAAGAGAGGGCTGAGCAGAACAGAAAGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AGCATTAATGTTAGCCTTCCCCTTGGACAGGTTACCTGGGCTGCAAACGGTCACTGGGAACACAGCTTTTaGAGTACCTTCATTAAGGAA +
Preference number: 2 (lower is better)
Translates to: SINVSLPLGQVTWAANGHWEHSF*STFIKE
Trigger: TTCCTTAATGAAGGTACTCCAAAAGCTGTGTTCCCA...GTGACCGTTTGCAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACATTAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCCACAGGACAAATCTGTaGACAATGAAATGGGAGAGC +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTHRTNL*TMKWES
Trigger: GCTCTCCCATTTCATTGTCCACAGATTTGTCCTGTG...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAAGTTTCATTTGGTCCTaGAGCACAGGACAAATCTGT +
Preference number: 2 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGSFIWS*STGQIC
Trigger: ACAGATTTGTCCTGTGCTCCAGGACCAAATGAAACT...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTCAGTTTTTGCACAAACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAACCCCAGCTGGCTAGCTaGCTAACTGAGCCAGCCATG +
Preference number: 2 (lower is better)
Translates to: VSFCTNYRKQRGEGDTYEPQLAS*LTEPAM
Trigger: CATGGCTGGCTCAGTTAGCCAGCTAGCCAGCTGGGG...TTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTTTGTGCAAAAACTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp ACAGGGGAAAGTTCAAAAGGACATGAAGGACACCAAGAGAACATCCAACTGCCAACACAAGGTCAAAGGTaGGAGTTCAAGCATCAGAGA +
Preference number: 2 (lower is better)
Translates to: TGESSKGHEGHQENIQLPTQGQR*EFKHQR
Trigger: TCTCTGATGCTTGAACTCTCACCTTTGACCTTGTGT...TGGCAGTTGGATGTTCTCTTGGTGTCCTTCATGTCCTTTTGAACTTTCCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACACAAACCTCAGCATTCAGTaGAAAGGGAATGGGGGTAAG +
Preference number: 2 (lower is better)
Translates to: SSWNRKQTILASPASQYTNLSIQ*KGNGGK
Trigger: CTTACCCCCATTCCCTTTTCACTGAATGCTGAGGTT...TGTGTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGATACATACGAAGGTGTaGAGAAACAGCAGGAAACAT +
Preference number: 2 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRIHTKV*RNSRKH
Trigger: ATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTAT...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCAATACATACGAAGGTGTaGAGAAACAGCAGGAAACAT +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPIHTKV*RNSRKH
Trigger: ATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTAT...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGTCAGAAATGCACTTCTaGACCTTCTTGAATACTAGG +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLSEMHF*TFLNTR
Trigger: CCTAGTATTCAAGAAGGTTCAGAAGTGCATTTCTGA...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AGGCTTGGATTTCCTGCAAAGCACCTAACACATGAAGACAGTCTCTGGGCAAGCTCAGAAATGCACTTCTaGACCTTCTTGAATACTAGG +
Preference number: 2 (lower is better)
Translates to: RLGFPAKHLTHEDSLWASSEMHF*TFLNTR
Trigger: CCTAGTATTCAAGAAGGTTCAGAAGTGCATTTCTGA...GCTTGCCCAGAGACTGTCTTCATGTGTTAGGTGCTTTGCAGGAAATCCAAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCAAAGTTCAAAAGGACATaGAGGACACCAAGAGAACAT +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPKFKRT*RTPREH
Trigger: ATGTTCTCTTGGTGTCCTTCATGTCCTTTTGAACTT...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GAAGGTGATACATACGAAGGTGTGAAGAAACAGCAGGAAACATGCACAACTTGTGGCAGGGGTGGGAAATaGCAAGAACTTTTGCACATG +
Preference number: 2 (lower is better)
Translates to: EGDTYEGVKKQQETCTTCGRGGK*QELLHM
Trigger: CATGTGCAAAAGTTCTTGTCATTTCCCACCCCTGCC...ACAAGTTGTGCATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTATCACCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAAATTAATAACAACATaGGGTCTCCTCAAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRKLITT*GLLKPQ
Trigger: TTGGGGCTTGAGGAGACCGCATGTTGTTATTAATTT...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GTTTTATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATGCTTCCCTGCAGGGCTaGTTCAGGAAGAACCACAAA +
Preference number: 2 (lower is better)
Translates to: VLSTGFPRAPLGIESKLYASLQG*FRKNHK
Trigger: TTTGTGGTTCTTCCTGAAGCAGCCCTGCAGGGAAGC...ATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GTCAGTTTTTGCACAAACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAAGCCACCTTTGGTTCTaGTTCTGCCTCTGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: VSFCTNYRKQRGEGDTYESHLWF*FCLWPP
Trigger: AGGGGGCCAGAGGCAGAAGCAGAACCAAAGGTGGCT...TTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTTTGTGCAAAAACTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GTTTTATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTATATTGCCACTCAGTaGACCGATGGCCTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: VLSTGFPRAPLGIESKLYYIATQ*TDGLLW
Trigger: CCAGAGGAGGCCATCGGTGCACTGAGTGGCAATATA...ATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCATTTCCCTCCCACCAGTaGTTAAGTCTCAGTGGGATC +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSFPSHQ*LSLSGI
Trigger: GATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GTTTTATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTCCTTTGCTGCACCTTaGCACCCTTTCCTGGACAAC +
Preference number: 2 (lower is better)
Translates to: VLSTGFPRAPLGIESKLYSFAAP*HPFLDN
Trigger: GTTGTCCAGGAAAGGGTGGCAAGGTGCAGCAAAGGA...ATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GTCAGTTTTTGCACAAACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGATGATGCCAGACCGTaGTTCTCTCCCCACCCCCAT +
Preference number: 2 (lower is better)
Translates to: VSFCTNYRKQRGEGDTYEDDARP*FSPHPH
Trigger: ATGGGGGTGGGGAGAGAAGCACGGTCTGGCATCATC...TTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTTTGTGCAAAAACTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGAGACAGAGGCGCTCTGTaGAGTCAGACTGTGGGCACA +
Preference number: 2 (lower is better)
Translates to: QGLKSIKTTTEQLKQSERDRGAL*SQTVGT
Trigger: TGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTC...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCAAATCAGAAAGGCAGCTaGCGCTCCAGGGTCTCAAAT +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSNQKGS*RSRVSN
Trigger: ATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGACACTTTTCTCCCAGTaGACAGAATTCAAGTTTACG +
Preference number: 2 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRTLFSQ*TEFKFT
Trigger: CGTAAACTTGAATTCTGTGCACTGGGAGAAAAGTGT...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCAACAACAGAAATGGACTaGTTAAGACGTCACTTCAGT +
Preference number: 2 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPTTEMD*LRRHFS
Trigger: ACTGAAGTGACGTCTTAAGCAGTCCATTTCTGTTGT...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TTGTGGAACCCAGGAGATAGTGGTTGGGCTGCACTGAAGGCAAATCAATGGCATACAACAGAAATGGACTaGTTAAGACGTCACTTCAGT +
Preference number: 2 (lower is better)
Translates to: LWNPGDSGWAALKANQWHTTEMD*LRRHFS
Trigger: ACTGAAGTGACGTCTTAAGCAGTCCATTTCTGTTGT...ATGCCATTGATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGGGTTCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAAGCCTGGAAGCGGACTaGCTGTGTGTTCACAAGGAT +
Preference number: 2 (lower is better)
Translates to: PLQGLKSIKTTTEQLKQSSLEAD*LCVHKD
Trigger: ATCCTTGTGAACACACAGCCAGTCCGCTTCCAGGCT...TGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGAAACCAAAGAACTGGCTaGCCTGGCACCCGGGAACAG +
Preference number: 2 (lower is better)
Translates to: QGLKSIKTTTEQLKQSERNQRTG*PGTREQ
Trigger: CTGTTCCCGGGTGCCAGGCCAGCCAGTTCTTTGGTT...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AGCATTAATGTTAGCCTTCCCCTTGGACAGGTTACCTGGGCTGCAAACGGTCACTCCTTCTCAACAAACTaGTTACAAACACAGCAAACT +
Preference number: 2 (lower is better)
Translates to: SINVSLPLGQVTWAANGHSFSTN*LQTQQT
Trigger: AGTTTGCTGTGTTTGTAACCAGTTTGTTGAGAAGGA...GTGACCGTTTGCAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACATTAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACAGGTTACCTGGGCTGCAAACGGTCACAGAAAGTCAGTAGTTTCAATCATACATTCCTCAAGGTGGACTaGTGTTGGTCCTTCTCAACA +
Preference number: 2 (lower is better)
Translates to: TGYLGCKRSQKVSSFNHTFLKVD*CWSFST
Trigger: TGTTGAGAAGGACCAACACCAGTCCACCTTGAGGAA...TGTATGATTGAAACTACTGACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTGTGGAACCCAGGAGATAGTGGTTGGGCTGCACTGAAGGCAAATCAATGGCATGGAGGCAACATTCCTTaGTGTTATGAACTTCCATAT +
Preference number: 2 (lower is better)
Translates to: LWNPGDSGWAALKANQWHGGNIP*CYELPY
Trigger: ATATGGAAGTTCATAACACCAAGGAATGTTGCCTCC...ATGCCATTGATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGGGTTCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAGGAGGCAACATTCCTTaGTGTTATGAACTTCCATAT +
Preference number: 2 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGGGNIP*CYELPY
Trigger: ATATGGAAGTTCATAACACCAAGGAATGTTGCCTCC...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGGGAGGCAACATTCCTTaGTGTTATGAACTTCCATAT +
Preference number: 2 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRGGNIP*CYELPY
Trigger: ATATGGAAGTTCATAACACCAAGGAATGTTGCCTCC...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTATCTGGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCCTTACCCCAACTCCTTCCCTTAATCAGATaGCTTCTTGACTGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: AIWLFTQFKNSFLPLPQLLPLIR*LLDCSA
Trigger: GGCAGAGCAGTCAAGAAGCCATCTGATTAAGGGAAG...GAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GAAGGTGATACATACGAAGGTGTGAAGAAACAGCAGGAAACATGCACAACTTGTCAACAAAACCATCTTTaGCCTGGGGAGGGAACTGTG +
Preference number: 2 (lower is better)
Translates to: EGDTYEGVKKQQETCTTCQQNHL*PGEGTV
Trigger: CACAGTTCCCTCCCCAGGCCAAAGATGGTTTTGTTG...ACAAGTTGTGCATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTATCACCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GAAGGTGATACATACGAAGGTGTGAAGAAACAGCAGGAAACATGCACAACTTGTAACCTCAGCATTCAGTaGAAAGGGAATGGGGGTAAG +
Preference number: 2 (lower is better)
Translates to: EGDTYEGVKKQQETCTTCNLSIQ*KGNGGK
Trigger: CTTACCCCCATTCCCTTTTCACTGAATGCTGAGGTT...ACAAGTTGTGCATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTATCACCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp ACCTTGATTCAGGCACACCAAGAAGCAGGTCTCTCTTCCCTTAATCAGATGGCTATACATACGAAGGTGTaGAGAAACAGCAGGAAACAT +
Preference number: 2 (lower is better)
Translates to: TLIQAHQEAGLSSLNQMAIHTKV*RNSRKH
Trigger: ATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTAT...AGCCATCTGATTAAGGGAAGAGAGACCTGCTTCTTGGTGTGCCTGAATCAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GACTGTAGTATTTATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATACATACGAAGGTGTaGAGAAACAGCAGGAAACAT +
Preference number: 2 (lower is better)
Translates to: DCSIYCACHLGKAQAGRYIHTKV*RNSRKH
Trigger: ATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTAT...ATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATAAATACTACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGAAAGTCCCCAAGACCCTaGGGCTGGATGGTGCTACAA +
Preference number: 2 (lower is better)
Translates to: QGLKSIKTTTEQLKQSERKSPRP*GWMVLQ
Trigger: TTGTAGCACCATCCAGCCTCAGGGTCTTGGGGACTT...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGAGGTTTAAGCTTCCAATaGCCCAGGAACCCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: QGLKSIKTTTEQLKQSERGLSFQ*PRNPGP
Trigger: AGGGCCTGGGTTCCTGGGTCATTGGAAGCTTAAACC...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGTGTGAAGAAACAGTCCACAGGGACAGCATaGCAAGGAGAGTCCCTATCT +
Preference number: 2 (lower is better)
Translates to: NYRKQRGEGDTYEGVKKQSTGTA*QGESLS
Trigger: AGATAGGGACTCTCCTTGTCATGCTGTCCCTGTGGA...CTGTTTCTTCACACCTTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GCTATCTGGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCCTTACCCCAACTCAAGAGGGAGATCCACTaGGTTACACAGAGCAATACA +
Preference number: 2 (lower is better)
Translates to: AIWLFTQFKNSFLPLPQLKREIH*VTQSNT
Trigger: TGTATTGCTCTGTGTAACTCAGTGGATCTCCCTCTT...GAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCAAATTAATAACAACATaGGGTCTCCTCAAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTKLITT*GLLKPQ
Trigger: TTGGGGCTTGAGGAGACCGCATGTTGTTATTAATTT...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGTCAAAAATCCTCCCTaGAGCCTCTGCTCTTCACAG +
Preference number: 2 (lower is better)
Translates to: PLQGLKSIKTTTEQLKQSVKNPP*SLCSSQ
Trigger: CTGTGAAGAGCAGAGGCTGCAGGGAGGATTTTTGAC...TGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGTGTGAAGAAACAGACCGATGGCCTCCTCTaGGTAATCAGAAGTACTGCC +
Preference number: 2 (lower is better)
Translates to: NYRKQRGEGDTYEGVKKQTDGLL*VIRSTA
Trigger: GGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGT...CTGTTTCTTCACACCTTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACGAAAGCAAACTATATTaGCAAGCCCAGCTTCTCAGT +
Preference number: 2 (lower is better)
Translates to: SSSWNRKQTILASPASQYESKLY*QAQLLS
Trigger: ACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTC...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CAACAGACTCAACTTATCACTATAAGAGAACAGCTGTCCCAGCATCAATGGGATAAGGTGGACTGGTGTTaGTCCTTCTCAACAAACTGG +
Preference number: 2 (lower is better)
Translates to: QQTQLITIREQLSQHQWDKVDWC*SFSTNW
Trigger: CCAGTTTGTTGAGAAGGACCAACACCAGTCCACCTT...ATCCCATTGATGCTGGGACAGCTGTTCTCTTATAGTGATAAGTTGAGTCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CAACAGACTCAACTTATCACTATAAGAGAACAGCTGTCCCAGCATCAATGGGATTTCCTCAAGGTGGACTaGTGTTGGTCCTTCTCAACA +
Preference number: 2 (lower is better)
Translates to: QQTQLITIREQLSQHQWDFLKVD*CWSFST
Trigger: TGTTGAGAAGGACCAACACCAGTCCACCTTGAGGAA...ATCCCATTGATGCTGGGACAGCTGTTCTCTTATAGTGATAAGTTGAGTCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGAGAGACTACTGGAAATaGGTACATTCTAACTTCATG +
Preference number: 2 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLRDYWK*VHSNFM
Trigger: CATGAAGTTAGAATGTACCCATTTCCAGTAGTCTCT...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TTGTGGAACCCAGGAGATAGTGGTTGGGCTGCACTGAAGGCAAATCAATGGCATAGAGACTACTGGAAATaGGTACATTCTAACTTCATG +
Preference number: 2 (lower is better)
Translates to: LWNPGDSGWAALKANQWHRDYWK*VHSNFM
Trigger: CATGAAGTTAGAATGTACCCATTTCCAGTAGTCTCT...ATGCCATTGATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGGGTTCCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAGAGACTACTGGAAATaGGTACATTCTAACTTCATG +
Preference number: 2 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRRDYWK*VHSNFM
Trigger: CATGAAGTTAGAATGTACCCATTTCCAGTAGTCTCT...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AGCATTAATGTTAGCCTTCCCCTTGGACAGGTTACCTGGGCTGCAAACGGTCACTCAAATATAGCAAAGTaGCTTGAAGTGACCTTGATT +
Preference number: 2 (lower is better)
Translates to: SINVSLPLGQVTWAANGHSNIAK*LEVTLI
Trigger: AATCAAGGTCACTTCAAGCCACTTTGCTATATTTGA...GTGACCGTTTGCAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACATTAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATTCCATCAATACCCTaGAAGCCTTTAGAACAGTTT +
Preference number: 2 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGIPSIP*KPLEQF
Trigger: AAACTGTTCTAAAGGCTTCCAGGGTATTGATGGAAT...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACAGGGGAAAGTTCAAAAGGACATGAAGGACACCAAGAGAACATCCAACTGCCAAGTTTCATTTGGTCCTaGAGCACAGGACAAATCTGT +
Preference number: 2 (lower is better)
Translates to: TGESSKGHEGHQENIQLPSFIWS*STGQIC
Trigger: ACAGATTTGTCCTGTGCTCCAGGACCAAATGAAACT...TGGCAGTTGGATGTTCTCTTGGTGTCCTTCATGTCCTTTTGAACTTTCCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGTGTGAAGAAACAGTGCTCAATCCTAGGATaGCCCACCCTTGTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: NYRKQRGEGDTYEGVKKQCSILG*PTLVPR
Trigger: TCTGGGAACAAGGGTGGGCCATCCTAGGATTGAGCA...CTGTTTCTTCACACCTTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CAA 90 bp ACATTTGGCATTTGGTTTTATCCACAGGTTTTCCCAGAGCTCCTCTaGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTA +
Preference number: 2 (lower is better)
Translates to: TFGIWFYPQVFPELL*ESKANYIGKPSFSV
Trigger: TACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATAAAACCAAATGCCAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCAACACAAGGTCAAAGGTaGGAGTTCAAGCATCAGAGA +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSTQGQR*EFKHQR
Trigger: TCTCTGATGCTTGAACTCTCACCTTTGACCTTGTGT...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CAACAGACTCAACTTATCACTATAAGAGAACAGCTGTCCCAGCATCAATGGGATCTAGTAGGGCTGCTCTaGGACAGTTACAAAGAATTG +
Preference number: 2 (lower is better)
Translates to: QQTQLITIREQLSQHQWDLVGLL*DSYKEL
Trigger: CAATTCTTTGTAACTGTCTCAGAGCAGCCCTACTAG...ATCCCATTGATGCTGGGACAGCTGTTCTCTTATAGTGATAAGTTGAGTCTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCAAAGAGGGAGATCCACTaGGTTACACAGAGCAATACA +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSKREIH*VTQSNT
Trigger: TGTATTGCTCTGTGTAACTCAGTGGATCTCCCTCTT...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACAAATTAATAACAACATaGGGTCTCCTCAAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: SSSWNRKQTILASPASQYKLITT*GLLKPQ
Trigger: TTGGGGCTTGAGGAGACCGCATGTTGTTATTAATTT...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCGAAAGCATCACATTTTaGTGTGGAGACTGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: YPQVFPELLLESKANYIGESITF*CGDCRK
Trigger: CTTCCTACAGTCTCCACAGCAAAATGTGATGCTTTC...GCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACACAGAAAGCATCACATTTTaGTGTGGAGACTGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: SSWNRKQTILASPASQYTESITF*CGDCRK
Trigger: CTTCCTACAGTCTCCACAGCAAAATGTGATGCTTTC...TGTGTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TTATGGGAACACAGCTTTTGGAGTACCTTCATTAAGGAATCAGAAATGCACTTCCTTCAGGGCAAGCTGTaGCAGAAGATCTTCTCACTC +
Preference number: 2 (lower is better)
Translates to: LWEHSFWSTFIKESEMHFLQGKL*QKIFSL
Trigger: GAGTGAGAAGATCTTCTGGCACAGCTTGCCCTGAAG...GAAGTGCATTTCTGATTCCTTAATGAAGGTACTCCAAAAGCTGTGTTCCCATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000068747.14
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGTGTGAAGAAACAGAAGAGAACATCCAACTaGCAGAGACAGAGGGGAACC +
Preference number: 2 (lower is better)
Translates to: NYRKQRGEGDTYEGVKKQKRTSN*QRQRGT
Trigger: GGTTCCCCTCTGTCTCTGGCAGTTGGATGTTCTCTT...CTGTTTCTTCACACCTTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GCTATCTGGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCCTTACCCCAACTCGAAAGCAAACTATATTaGCAAGCCCAGCTTCTCAGT +
Preference number: 2 (lower is better)
Translates to: AIWLFTQFKNSFLPLPQLESKLY*QAQLLS
Trigger: ACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTC...GAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAACCCCTCAGGATATaGCACCTAAACTCCAAAGTA +
Preference number: 2 (lower is better)
Translates to: YPQVFPELLLESKANYIGKPLRI*HLNSKV
Trigger: TACTTTGGAGTTTAGGTGCCATATCCTGAGGGGTTT...GCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACACAAAACCCCTCAGGATATaGCACCTAAACTCCAAAGTA +
Preference number: 2 (lower is better)
Translates to: SSWNRKQTILASPASQYTKPLRI*HLNSKV
Trigger: TACTTTGGAGTTTAGGTGCCATATCCTGAGGGGTTT...TGTGTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGATCAAATATAGCAAAGTaGCTTGAAGTGACCTTGATT +
Preference number: 2 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGSNIAK*LEVTLI
Trigger: AATCAAGGTCACTTCAAGCCACTTTGCTATATTTGA...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AGGCTTGGATTTCCTGCAAAGCACCTAACACATGAAGACAGTCTCTGGGCAAGCGAATTCAAGTTTACGTaGTTCAGCTTAAGAAGTGTA +
Preference number: 2 (lower is better)
Translates to: RLGFPAKHLTHEDSLWASEFKFT*FSLRSV
Trigger: TACACTTCTTAAGCTGAACCACGTAAACTTGAATTC...GCTTGCCCAGAGACTGTCTTCATGTGTTAGGTGCTTTGCAGGAAATCCAAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp ACAGAGGGGAACCTAAGGCTTGGATTTCCTGCAAAGCACCTAACACATGAAGACATTCCATCAATACCCTaGAAGCCTTTAGAACAGTTT +
Preference number: 2 (lower is better)
Translates to: TEGNLRLGFPAKHLTHEDIPSIP*KPLEQF
Trigger: AAACTGTTCTAAAGGCTTCCAGGGTATTGATGGAAT...GTCTTCATGTGTTAGGTGCTTTGCAGGAAATCCAAGCCTTAGGTTCCCCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGTGTGAAGAAACAGGGGGAAGGGCAGGGGTaGGAAATGACAAGAACTTTT +
Preference number: 2 (lower is better)
Translates to: NYRKQRGEGDTYEGVKKQGEGQG*EMTRTF
Trigger: AAAAGTTCTTGTCATTTCCCACCCCTGCCCTTCCCC...CTGTTTCTTCACACCTTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GTTTTATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATACACAAGGTCAAAGGTaGGAGTTCAAGCATCAGAGA +
Preference number: 2 (lower is better)
Translates to: VLSTGFPRAPLGIESKLYTQGQR*EFKHQR
Trigger: TCTCTGATGCTTGAACTCTCACCTTTGACCTTGTGT...ATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAACACAAGGTCAAAGGTaGGAGTTCAAGCATCAGAGA +
Preference number: 2 (lower is better)
Translates to: PLQGLKSIKTTTEQLKQSTQGQR*EFKHQR
Trigger: TCTCTGATGCTTGAACTCTCACCTTTGACCTTGTGT...TGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGTGTGAAGAAACAGAACCTCAGCATTCAGTaGAAAGGGAATGGGGGTAAG +
Preference number: 2 (lower is better)
Translates to: NYRKQRGEGDTYEGVKKQNLSIQ*KGNGGK
Trigger: CTTACCCCCATTCCCTTTTCACTGAATGCTGAGGTT...CTGTTTCTTCACACCTTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCTCAGAAATGCACTTCTaGACCTTCTTGAATACTAGG +
Preference number: 2 (lower is better)
Translates to: YPQVFPELLLESKANYIGSEMHF*TFLNTR
Trigger: CCTAGTATTCAAGAAGGTTCAGAAGTGCATTTCTGA...GCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGAGTCAAAAATCCTCCCTaGAGCCTCTGCTCTTCACAG +
Preference number: 2 (lower is better)
Translates to: QGLKSIKTTTEQLKQSERVKNPP*SLCSSQ
Trigger: CTGTGAAGAGCAGAGGCTGCAGGGAGGATTTTTGAC...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGAAGTCCCCCACTTGGCTaGCATTTCTTCCTAGTAAGG +
Preference number: 2 (lower is better)
Translates to: QGLKSIKTTTEQLKQSERSPPLG*HFFLVR
Trigger: CCTTACTAGGAAGAAATGGCAGCCAAGTGGGGGACT...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp GTCAGTTTTTGCACAAACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAAATCAGAAAGGCAGCTaGCGCTCCAGGGTCTCAAAT +
Preference number: 2 (lower is better)
Translates to: VSFCTNYRKQRGEGDTYENQKGS*RSRVSN
Trigger: ATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT...TTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTTTGTGCAAAAACTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGAAATCAGAAAGGCAGCTaGCGCTCCAGGGTCTCAAAT +
Preference number: 2 (lower is better)
Translates to: QGLKSIKTTTEQLKQSERNQKGS*RSRVSN
Trigger: ATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGTGTGAAGAAACAGAGGACACTCACTGTATaGAGCCCTGAAATGAGGAGA +
Preference number: 2 (lower is better)
Translates to: NYRKQRGEGDTYEGVKKQRTLTV*SPEMRR
Trigger: TCTCCTCATTTCAGGGCTGCATACAGTGAGTGTCCT...CTGTTTCTTCACACCTTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGACTTGCCACCCTTTCCTaGACAACCTTGCTTCCACTT +
Preference number: 2 (lower is better)
Translates to: QGLKSIKTTTEQLKQSERLATLS*TTLLPL
Trigger: AAGTGGAAGCAAGGTTGTCCAGGAAAGGGTGGCAAG...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TGTGTGTACAACAATCACATTCTGGATTCTACAAAATCCTGGCCTTTTCCAGAGTCAAGCATAATATATTaGGCAACCTGTAGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: CVYNNHILDSTKSWPFPESSIIY*ATCRGP
Trigger: GGGACCCCTACAGGTTGCCCAATATATTATGCTTGA...CTCTGGAAAAGGCCAGGATTTTGTAGAATCCAGAATGTGATTGTTGTACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GAAGGTGATACATACGAAGGTGTGAAGAAACAGCAGGAAACATGCACAACTTGTGAAAGCAAACTATATTaGCAAGCCCAGCTTCTCAGT +
Preference number: 2 (lower is better)
Translates to: EGDTYEGVKKQQETCTTCESKLY*QAQLLS
Trigger: ACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTC...ACAAGTTGTGCATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTATCACCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCAAAACCCCTCAGGATATaGCACCTAAACTCCAAAGTA +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSKPLRI*HLNSKV
Trigger: TACTTTGGAGTTTAGGTGCCATATCCTGAGGGGTTT...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGTGTGAAGAAACAGTTCCTCAAGGTGGACTaGTGTTGGTCCTTCTCAACA +
Preference number: 2 (lower is better)
Translates to: NYRKQRGEGDTYEGVKKQFLKVD*CWSFST
Trigger: TGTTGAGAAGGACCAACACCAGTCCACCTTGAGGAA...CTGTTTCTTCACACCTTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CTGACCATGGCTCTGCTGGGGCAAGTGCTCCTTTTAGAAATCACAAGTAGGTATGAATTCAAGTTTACGTaGTTCAGCTTAAGAAGTGTA +
Preference number: 2 (lower is better)
Translates to: LTMALLGQVLLLEITSRYEFKFT*FSLRSV
Trigger: TACACTTCTTAAGCTGAACCACGTAAACTTGAATTC...ATACCTACTTGTGATTTCTAAAAGGAGCACTTGCCCCAGCAGAGCCATGGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACCTGAAGGCAAATCAATaGCATGATATAATCCACGAA +
Preference number: 2 (lower is better)
Translates to: SSSWNRKQTILASPASQYLKANQ*HDIIHE
Trigger: TTCGTGGATTATATCATGCCATTGATTTGCCTTCAG...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTCAGTTTTTGCACAAACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGGGAAGGGCAGGGGTaGGAAATGACAAGAACTTTT +
Preference number: 2 (lower is better)
Translates to: VSFCTNYRKQRGEGDTYEGEGQG*EMTRTF
Trigger: AAAAGTTCTTGTCATTTCCCACCCCTGCCCTTCCCC...TTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTTTGTGCAAAAACTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CATATGGAGCCTGTAAACGTCCTATACTTTCTTCTGTCTTCAAGGACAGAAAATTATAGCAAAGTGGCTTaGAGTGACCTTGATTCAGGC +
Preference number: 2 (lower is better)
Translates to: HMEPVNVLYFLLSSRTENYSKVA*SDLDSG
Trigger: GCCTGAATCAAGGTCACTTCAAGCCACTTTGCTATA...ATTTTCTGTCCTTGAAGACAGAAGAAAGTATAGGACGTTTACAGGCTCCATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp TATGGGAACACAGCTTTTGGAGTACCTTCATTAAGGAATCAGAAATGCACTTCTTATAGCAAAGTGGCTTaGAGTGACCTTGATTCAGGC +
Preference number: 2 (lower is better)
Translates to: YGNTAFGVPSLRNQKCTSYSKVA*SDLDSG
Trigger: GCCTGAATCAAGGTCACTTCAAGCCACTTTGCTATA...AGAAGTGCATTTCTGATTCCTTAATGAAGGTACTCCAAAAGCTGTGTTCCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GTCAGTTTTTGCACAAACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAAAAGCACCTAACACATaGAGACAGTCTCTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: VSFCTNYRKQRGEGDTYEKAPNT*RQSLGK
Trigger: CTTGCCCAGAGACTGTCTTCATGTGTTAGGTGCTTT...TTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTTTGTGCAAAAACTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCAAAGTTCAAAAGGACATaGAGGACACCAAGAGAACAT +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSKFKRT*RTPREH
Trigger: ATGTTCTCTTGGTGTCCTTCATGTCCTTTTGAACTT...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAAAGCATCACATTTTaGTGTGGAGACTGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: PLQGLKSIKTTTEQLKQSESITF*CGDCRK
Trigger: CTTCCTACAGTCTCCACAGCAAAATGTGATGCTTTC...TGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGTGTGAAGAAACAGTCAAGCATAATATATTaGGCAACCTGTAGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: NYRKQRGEGDTYEGVKKQSSIIY*ATCRGP
Trigger: GGGACCCCTACAGGTTGCCCAATATATTATGCTTGA...CTGTTTCTTCACACCTTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGACTTAAGTCCCCCACTTaGCTGCCATTTCTTCCTAGT +
Preference number: 2 (lower is better)
Translates to: QGLKSIKTTTEQLKQSERLKSPT*LPFLPS
Trigger: ACTAGGAAGAAATGGCAGCCAAGTGGGGGACTTAAG...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCTCCTTCTCAACAAACTaGTTACAAACACAGCAAACT +
Preference number: 2 (lower is better)
Translates to: YPQVFPELLLESKANYIGSFSTN*LQTQQT
Trigger: AGTTTGCTGTGTTTGTAACCAGTTTGTTGAGAAGGA...GCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TACATCCAAACAGAGAGAGAGAACAGGACACTCACTGTATGCAGCCCTGAAATGTCAAATATAGCAAAGTaGCTTGAAGTGACCTTGATT +
Preference number: 2 (lower is better)
Translates to: YIQTERENRTLTVCSPEMSNIAK*LEVTLI
Trigger: AATCAAGGTCACTTCAAGCCACTTTGCTATATTTGA...CATTTCAGGGCTGCATACAGTGAGTGTCCTGTTCTCTCTCTCTGTTTGGATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CATATATTTATAGGGCTACCTCTGCTCAGATGCACATTCCCACAGCTTCTCTTATGGGAACACAGCTTTTaGAGTACCTTCATTAAGGAA +
Preference number: 2 (lower is better)
Translates to: HIFIGLPLLRCTFPQLLLWEHSF*STFIKE
Trigger: TTCCTTAATGAAGGTACTCCAAAAGCTGTGTTCCCA...TAAGAGAAGCTGTGGGAATGTGCATCTGAGCAGAGGTAGCCCTATAAATATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACACACTGAAGGCAAATCAATaGCATGATATAATCCACGAA +
Preference number: 2 (lower is better)
Translates to: SSWNRKQTILASPASQYTLKANQ*HDIIHE
Trigger: TTCGTGGATTATATCATGCCATTGATTTGCCTTCAG...TGTGTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GTCAGTTTTTGCACAAACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAACACAAGGTCAAAGGTaGGAGTTCAAGCATCAGAGA +
Preference number: 2 (lower is better)
Translates to: VSFCTNYRKQRGEGDTYETQGQR*EFKHQR
Trigger: TCTCTGATGCTTGAACTCTCACCTTTGACCTTGTGT...TTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTTTGTGCAAAAACTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp CATATGGAGCCTGTAAACGTCCTATACTTTCTTCTGTCTTCAAGGACAGAAAATACTTCTGAACCTTCTTaGATACTAGGCTCTGCTCAA +
Preference number: 2 (lower is better)
Translates to: HMEPVNVLYFLLSSRTENTSEPS*ILGSAQ
Trigger: TTGAGCAGAGCCTAGTATTCAAGAAGGTTCAGAAGT...ATTTTCTGTCCTTGAAGACAGAAGAAAGTATAGGACGTTTACAGGCTCCATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GTCAGTTTTTGCACAAACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAAAGAGGGAGATCCACTaGGTTACACAGAGCAATACA +
Preference number: 2 (lower is better)
Translates to: VSFCTNYRKQRGEGDTYEKREIH*VTQSNT
Trigger: TGTATTGCTCTGTGTAACTCAGTGGATCTCCCTCTT...TTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTTTGTGCAAAAACTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TTATGGGAACACAGCTTTTGGAGTACCTTCATTAAGGAATCAGAAATGCACTTCGAAAGCATCACATTTTaGTGTGGAGACTGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: LWEHSFWSTFIKESEMHFESITF*CGDCRK
Trigger: CTTCCTACAGTCTCCACAGCAAAATGTGATGCTTTC...GAAGTGCATTTCTGATTCCTTAATGAAGGTACTCCAAAAGCTGTGTTCCCATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp TGTGTGTACAACAATCACATTCTGGATTCTACAAAATCCTGGCCTTTTCCAGAGACACTTTTCTCCCAGTaGACAGAATTCAAGTTTACG +
Preference number: 2 (lower is better)
Translates to: CVYNNHILDSTKSWPFPETLFSQ*TEFKFT
Trigger: CGTAAACTTGAATTCTGTGCACTGGGAGAAAAGTGT...CTCTGGAAAAGGCCAGGATTTTGTAGAATCCAGAATGTGATTGTTGTACACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTCAGTTTTTGCACAAACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAATCAAGCATAATATATTaGGCAACCTGTAGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: VSFCTNYRKQRGEGDTYESSIIY*ATCRGP
Trigger: GGGACCCCTACAGGTTGCCCAATATATTATGCTTGA...TTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTTTGTGCAAAAACTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AAGGGAATGGGGGTAAGGGTGTATTTCAGACATTTTTCTGCAGTTGAGAACTCAAGAGACTACTGGAAATaGGTACATTCTAACTTCATG +
Preference number: 2 (lower is better)
Translates to: KGMGVRVYFRHFSAVENSRDYWK*VHSNFM
Trigger: CATGAAGTTAGAATGTACCCATTTCCAGTAGTCTCT...TGAGTTCTCAACTGCAGAAAAATGTCTGAAATACACCCTTACCCCCATTCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR TCA 90 bp GTCAGTTTTTGCACAAACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAATCACGACTTTGAGTTaGTTGAATCCCGTTGTTGCT +
Preference number: 2 (lower is better)
Translates to: VSFCTNYRKQRGEGDTYEITTLS*LNPVVA
Trigger: AGCAACAACGGGATTCAATCAACTCAAAGTCGTGAT...TTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTTTGTGCAAAAACTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp AACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGTGTGAAGAAACAGACAACAGAAATGGACTaGTTAAGACGTCACTTCAGT +
Preference number: 2 (lower is better)
Translates to: NYRKQRGEGDTYEGVKKQTTEMD*LRRHFS
Trigger: ACTGAAGTGACGTCTTAAGCAGTCCATTTCTGTTGT...CTGTTTCTTCACACCTTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTTTTATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTCCTTCTCAACAAACTaGTTACAAACACAGCAAACT +
Preference number: 2 (lower is better)
Translates to: VLSTGFPRAPLGIESKLYSFSTN*LQTQQT
Trigger: AGTTTGCTGTGTTTGTAACCAGTTTGTTGAGAAGGA...ATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR GCA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGAACAACAGAAATGGACTaGTTAAGACGTCACTTCAGT +
Preference number: 2 (lower is better)
Translates to: QGLKSIKTTTEQLKQSERTTEMD*LRRHFS
Trigger: ACTGAAGTGACGTCTTAAGCAGTCCATTTCTGTTGT...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGTGTGAAGAAACAGAGAGACTACTGGAAATaGGTACATTCTAACTTCATG +
Preference number: 2 (lower is better)
Translates to: NYRKQRGEGDTYEGVKKQRDYWK*VHSNFM
Trigger: CATGAAGTTAGAATGTACCCATTTCCAGTAGTCTCT...CTGTTTCTTCACACCTTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp TGTGTGTACAACAATCACATTCTGGATTCTACAAAATCCTGGCCTTTTCCAGAGTCAAATATAGCAAAGTaGCTTGAAGTGACCTTGATT +
Preference number: 2 (lower is better)
Translates to: CVYNNHILDSTKSWPFPESNIAK*LEVTLI
Trigger: AATCAAGGTCACTTCAAGCCACTTTGCTATATTTGA...CTCTGGAAAAGGCCAGGATTTTGTAGAATCCAGAATGTGATTGTTGTACACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGTGTGAAGAAACAGTGTACAACAGCAAGATaGTCAATCCCTGTTTGTTAT +
Preference number: 2 (lower is better)
Translates to: NYRKQRGEGDTYEGVKKQCTTAR*SIPVCY
Trigger: ATAACAAACAGGGATTGACCATCTTGCTGTTGTACA...CTGTTTCTTCACACCTTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp AACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGTGTGAAGAAACAGCTGAAGGCAAATCAATaGCATGATATAATCCACGAA +
Preference number: 2 (lower is better)
Translates to: NYRKQRGEGDTYEGVKKQLKANQ*HDIIHE
Trigger: TTCGTGGATTATATCATGCCATTGATTTGCCTTCAG...CTGTTTCTTCACACCTTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGACCAACATTTGGCATTTaGTTTTATCCACAGGTTTTC +
Preference number: 2 (lower is better)
Translates to: QGLKSIKTTTEQLKQSERPTFGI*FYPQVF
Trigger: GAAAACCTGTGGATAAAACCAAATGCCAAATGTTGG...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGATGTACAACAGCAAGATaGTCAATCCCTGTTTGTTAT +
Preference number: 2 (lower is better)
Translates to: QGLKSIKTTTEQLKQSERCTTAR*SIPVCY
Trigger: ATAACAAACAGGGATTGACCATCTTGCTGTTGTACA...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CCA 90 bp GTCAGTTTTTGCACAAACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGAATTCAAGTTTACGTaGTTCAGCTTAAGAAGTGTA +
Preference number: 2 (lower is better)
Translates to: VSFCTNYRKQRGEGDTYEEFKFT*FSLRSV
Trigger: TACACTTCTTAAGCTGAACCACGTAAACTTGAATTC...TTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTTTGTGCAAAAACTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 72 bp GGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTaGAGTCAGACTGTGGGCACACAGCAGGCTCTCTCA +
Preference number: 3 (lower is better)
Translates to: GTAAPPADRGAL*SQTVGTQQALS
Trigger: TGAGAGAGCCTGCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CAGTACACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGCCAGTGCGGGGTGGTaGGTGCCCAGAGCTGTAAAC +
Preference number: 3 (lower is better)
Translates to: QYTGRGPQHLLPTEALCAASAGW*VPRAVN
Trigger: GTTTACAGCTCTGGGCACCAACCACCCCGCACTGGC...TGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTGTACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACGCCCTGGGCACTCTaGTGGAACCCAGGAGATAGT +
Preference number: 3 (lower is better)
Translates to: HRKGTAAPPADRGALCSQTPWAL*WNPGDS
Trigger: ACTATCTCCTGGGTTCCACAAGAGTGCCCAGGGCGT...CTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTACCCACAGCCACCTTaGGTTCTGCTTCTGCCTCTG +
Preference number: 3 (lower is better)
Translates to: QEGDRSTSCRQRRSVQSDYPQPP*VLLLPL
Trigger: CAGAGGCAGAAGCAGAACCAAAGGTGGCTGTGGGTA...GTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 72 bp CTTCTCAGTACACAGGAAGGGGACCGCAGCACCTCCTaGCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGG +
Preference number: 3 (lower is better)
Translates to: LLSTQEGDRSTS*RQRRSVQSDCG
Trigger: CCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTGTACTGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTGTGGGCACACAGCAGGCTCATGTTAGCCTTCCCCTaGGACAGGTTACCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: LLPTEALCAVRLWAHSRLMLAFP*DRLPGL
Trigger: CAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACAT...GAGCCTGCTGTGTGCCCACAGTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CAGTACACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAATGTTAGCCTTCCCCTaGGACAGGTTACCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: QYTGRGPQHLLPTEALCAMLAFP*DRLPGL
Trigger: CAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACAT...TGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTGTACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 72 bp ATCCTGCCTACCCACAGCCACCTTTGGTTCTGCTTCTaGCTCTGGCCCCCTGTACTCCCTGAGCAGAGCAGC +
Preference number: 3 (lower is better)
Translates to: ILPTHSHLWFCF*LWPPVLPEQSS
Trigger: GCTGCTCTGCTCAGGGAGTACAGGGGGCCAGAGGCAGAAGCAGAACCAAAGGTGGCTGTGGGTAGGCAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp CTGTGGGCACACAGCAGGCTCTCTCATGCTAGGCGCTaGCATCCTACCACCCCTTCCAGGACCTTAAGCAGC +
Preference number: 3 (lower is better)
Translates to: LWAHSRLSHARR*HPTTPSRTLSS
Trigger: GCTGCTTAAGGTCCTGGAAGGGGTGGTAGGATGCCAGCGCCTAGCATGAGAGAGCCTGCTGTGTGCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp ACCGATGGCCTCCTCTGGGTAATCAGAAGTACTGCCCGCCTGCCCTCCCTCCCTTACCCACAGCCACCTTaGGTTCTGCTTCTGCCTCTG +
Preference number: 3 (lower is better)
Translates to: TDGLLWVIRSTARLPSLPYPQPP*VLLLPL
Trigger: CAGAGGCAGAAGCAGAACCAAAGGTGGCTGTGGGTA...AGGGAGGGAGGGCAGGCGGGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR TCA 72 bp ATCAGAAGTACTGCCCGCCTGCCCTCCCTCCCTCCGTaGTCTAGCCTTGATGCCCTAAGCATCCTGCCTACC +
Preference number: 3 (lower is better)
Translates to: IRSTARLPSLPP*SSLDALSILPT
Trigger: GGTAGGCAGGATGCTTAGGGCATCAAGGCTAGATCACGGAGGGAGGGAGGGCAGGCGGGCAGTACTTCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR TCA 72 bp GTGCTGGAGTTCCTTCAACACCAGGCAGAGAGTGGATaGTGCCAGACCGTGCTTCTCTCCCCACCCCCATCC +
Preference number: 3 (lower is better)
Translates to: VLEFLQHQAESG*CQTVLLSPPPS
Trigger: GGATGGGGGTGGGGAGAGAAGCACGGTCTGGCATCATCCACTCTCTGCCTGGTGTTGAAGGAACTCCAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 72 bp ATGCCAGACCGTGCTTCTCTCCCCACCCCCATCCTTTaGTGCACCTTGCCACCCTTTCCTGGACAACCTTGC +
Preference number: 3 (lower is better)
Translates to: MPDRASLPTPIL*CTLPPFPGQPC
Trigger: GCAAGGTTGTCCAGGAAAGGGTGGCAAGGTGCAGCAAAGGATGGGGGTGGGGAGAGAAGCACGGTCTGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GCTAGGCGCTGGCATCCTACCACCCCTTCCAGGACCTTAAGCAGCATACTTAAGCCCCACCCCCATCCTTaGCTGCACCTTGCCACCCTT +
Preference number: 3 (lower is better)
Translates to: ARRWHPTTPSRTLSSILKPHPHP*LHLATL
Trigger: AAGGGTGGCAAGGTGCAGCAAAGGATGGGGGTGGGG...CTTAAGTATGCTGCTTAAGGTCCTGGAAGGGGTGGTAGGATGCCAGCGCCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGAACCAAAGCACAAACTaGTCCTCTGTACGAAGCGAC +
Preference number: 3 (lower is better)
Translates to: HRKGTAAPPADRGALCSQNQSTN*SSVRSD
Trigger: GTCGCTTCGTACAGAGGACAAGTTTGTGCTTTGGTT...CTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR TCA 72 bp TCTGTACGAAGCGACACTCCCACAGAAGGCAGTAGCTaGGTCTTCAGGGCAAGCTGTGCCTGCGAGAGTGGC +
Preference number: 3 (lower is better)
Translates to: SVRSDTPTEGSS*VFRASCACESG
Trigger: GCCACTCTCGCAGGCACAGCTTGCCCTGAAGACTCAGCTACTGCCTTCTGTGGGAGTGTCGCTTCGTACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000068726.13
ENSMUST00000111452.8
3UTR CCA 72 bp AGGTATATTGCCACTCAGTGCACCGATGGCCTCCTCTaGGTAATCAGAAGTACTGCCCGCCTGCCCTCCCTC +
Preference number: 3 (lower is better)
Translates to: RYIATQCTDGLL*VIRSTARLPSL
Trigger: GAGGGAGGGCAGGCGGGCAGTACTTCTGATTACCCAGAGGAGGCCATCGGTGCACTGAGTGGCAATATACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GCTGTGTGTTCACAAGGATACAAACACCACACGGCATGTGCTAGTAGGGCTGCTGCCAGTGCGGGGTGGTaGGTGCCCAGAGCTGTAAAC +
Preference number: 3 (lower is better)
Translates to: AVCSQGYKHHTACASRAAASAGW*VPRAVN
Trigger: GTTTACAGCTCTGGGCACCAACCACCCCGCACTGGC...AGCAGCCCTACTAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GCTGTGTGTTCACAAGGATACAAACACCACACGGCATGTGCTAGTAGGGCTGCTCCCCACCCCCATCCTTaGCTGCACCTTGCCACCCTT +
Preference number: 3 (lower is better)
Translates to: AVCSQGYKHHTACASRAAPHPHP*LHLATL
Trigger: AAGGGTGGCAAGGTGCAGCAAAGGATGGGGGTGGGG...AGCAGCCCTACTAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACACACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGCCCCACCCCCATCCTTaGCTGCACCTTGCCACCCTT +
Preference number: 3 (lower is better)
Translates to: YCACHLGKAQAGRYIATQPHPHP*LHLATL
Trigger: AAGGGTGGCAAGGTGCAGCAAAGGATGGGGGTGGGG...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGACTCTAGCAAAACCAATTaGGCAGCACAAAAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: QEGDRSTSCRQRRSVQSDSSKTN*AAQKGK
Trigger: TTTTCCCTTTTGTGCTGCCAAATTGGTTTTGCTAGA...GTCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp AATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGCCCCACCCCCATCCTTaGCTGCACCTTGCCACCCTT +
Preference number: 3 (lower is better)
Translates to: NQKGSCRSRVSNPLKPLRPHPHP*LHLATL
Trigger: AAGGGTGGCAAGGTGCAGCAAAGGATGGGGGTGGGG...CCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CTGGGCAAACGGGATAATGGAAGTACATGGTCTCCCCAGCTGGCTAGCTGGCTAATGTTAGCCTTCCCCTaGGACAGGTTACCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: LGKRDNGSTWSPQLASWLMLAFP*DRLPGL
Trigger: CAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACAT...TAGCCAGCTAGCCAGCTGGGGAGACCATGTACTTCCATTATCCCGTTTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 72 bp TTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTaGCACTCAGTGCACCGATGGCCTCCTCTGGGTAAT +
Preference number: 3 (lower is better)
Translates to: LSPRESAGRQVY*HSVHRWPPLGN
Trigger: ATTACCCAGAGGAGGCCATCGGTGCACTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 72 bp CACTGGCAGCTCCCTGTGGAGCACAGCTCTCGCCTCTaGCAATTCACAGCATTAATGTTAGCCTTCCCCTTG +
Preference number: 3 (lower is better)
Translates to: HWQLPVEHSSRL*QFTALMLAFPL
Trigger: CAAGGGGAAGGCTAACATTAATGCTGTGAATTGGCAGAGGCGAGAGCTGTGCTCCACAGGGAGCTGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp GGGCAACCTGTAGGGGTCCCAGAGCAGAAACTGTGCTaGAGTTCCTTCAACACCAGGCAGAGAGTGGATGAT +
Preference number: 3 (lower is better)
Translates to: GQPVGVPEQKLC*SSFNTRQRVDD
Trigger: ATCATCCACTCTCTGCCTGGTGTTGAAGGAACTCCAGCACAGTTTCTGCTCTGGGACCCCTACAGGTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp CTTAGAGCAGGAGAGCCCAGAGGCTATGTGGGACACTaGCAAAGGCTGGAGTTAAGACCCATGAAAGGCAGC +
Preference number: 3 (lower is better)
Translates to: LRAGEPRGYVGH*QRLELRPMKGS
Trigger: GCTGCCTTTCATGGGTCTTAACTCCAGCCTTTGCCAGTGTCCCACATAGCCTCTGGGCTCTCCTGCTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp GATAATGGAAGTACATGGTCTCCCCAGCTGGCTAGCTaGCTAACTGAGCCAGCCATGGCTGACCATGGCTCT +
Preference number: 3 (lower is better)
Translates to: DNGSTWSPQLAS*LTEPAMADHGS
Trigger: AGAGCCATGGTCAGCCATGGCTGGCTCAGTTAGCCAGCTAGCCAGCTGGGGAGACCATGTACTTCCATTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp CCCAGAAATCCAAGCCCTAAGGTTCCACATACGCCCTaGGCACTCTTGTGGAACCCAGGAGATAGTGGTTGG +
Preference number: 3 (lower is better)
Translates to: PRNPSPKVPHTP*ALLWNPGDSGW
Trigger: CCAACCACTATCTCCTGGGTTCCACAAGAGTGCCCAGGGCGTATGTGGAACCTTAGGGCTTGGATTTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp ACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCAGTCAGATCTAGCAAAACCAATTaGGCAGCACAAAAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: TGRGPQHLLPTEALCAVRSSKTN*AAQKGK
Trigger: TTTTCCCTTTTGTGCTGCCAAATTGGTTTTGCTAGA...TCTGACTGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CAGTACACAGGAAGGGGACCGCAGCACCTCCTGCCGACAGAGGCGCTCTGTGCATCTAGCAAAACCAATTaGGCAGCACAAAAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: QYTGRGPQHLLPTEALCASSKTN*AAQKGK
Trigger: TTTTCCCTTTTGTGCTGCCAAATTGGTTTTGCTAGA...TGCACAGAGCGCCTCTGTCGGCAGGAGGTGCTGCGGTCCCCTTCCTGTGTACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCGCCAGTGCGGGGTGGTaGGTGCCCAGAGCTGTAAAC +
Preference number: 3 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTASAGW*VPRAVN
Trigger: GTTTACAGCTCTGGGCACCAACCACCCCGCACTGGC...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp AAGAACTGGCTGGCCTGGCACCCGGGAACAGTAGCTATCTGGCTCTTCACCCAACAAGGTGGACTGGTGTaGGTCCTTCTCAACAAACTG +
Preference number: 3 (lower is better)
Translates to: KNWLAWHPGTVAIWLFTQQGGLV*VLLNKL
Trigger: CAGTTTGTTGAGAAGGACCAACACCAGTCCACCTTG...TTGGGTGAAGAGCCAGATAGCTACTGTTCCCGGGTGCCAGGCCAGCCAGTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp GCTAATGCACTGGGCAAACGGGATAATGGAAGTACATaGTCTCCCCAGCTGGCTAGCTGGCTAACTGAGCCA +
Preference number: 3 (lower is better)
Translates to: ANALGKRDNGST*SPQLASWLTEP
Trigger: TGGCTCAGTTAGCCAGCTAGCCAGCTGGGGAGACCATGTACTTCCATTATCCCGTTTGCCCAGTGCATTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp GTGCTCGAGGACAGTGCTAGTGCTGTGCTAATGCACTaGGCAAACGGGATAATGGAAGTACATGGTCTCCCC +
Preference number: 3 (lower is better)
Translates to: VLEDSASAVLMH*ANGIMEVHGLP
Trigger: GGGGAGACCATGTACTTCCATTATCCCGTTTGCCCAGTGCATTAGCACAGCACTAGCACTGTCCTCGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GCTGTGTGTTCACAAGGATACAAACACCACACGGCATGTGCTAGTAGGGCTGCTTACCCACAGCCACCTTaGGTTCTGCTTCTGCCTCTG +
Preference number: 3 (lower is better)
Translates to: AVCSQGYKHHTACASRAAYPQPP*VLLLPL
Trigger: CAGAGGCAGAAGCAGAACCAAAGGTGGCTGTGGGTA...AGCAGCCCTACTAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACACACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp AAGAACTGGCTGGCCTGGCACCCGGGAACAGTAGCTATCTGGCTCTTCACCCAAAACCAAAGCACAAACTaGTCCTCTGTACGAAGCGAC +
Preference number: 3 (lower is better)
Translates to: KNWLAWHPGTVAIWLFTQNQSTN*SSVRSD
Trigger: GTCGCTTCGTACAGAGGACAAGTTTGTGCTTTGGTT...TTGGGTGAAGAGCCAGATAGCTACTGTTCCCGGGTGCCAGGCCAGCCAGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp AAGAACTGGCTGGCCTGGCACCCGGGAACAGTAGCTATCTGGCTCTTCACCCAAATGGTCAATCCCTGTTaGTTATCCACAGGGACAGCA +
Preference number: 3 (lower is better)
Translates to: KNWLAWHPGTVAIWLFTQMVNPC*LSTGTA
Trigger: TGCTGTCCCTGTGGATAACAAACAGGGATTGACCAT...TTGGGTGAAGAGCCAGATAGCTACTGTTCCCGGGTGCCAGGCCAGCCAGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp ATGTTAGCCTTCCCCTTGGACAGGTTACCTGGGCTGCAAACGGTCACAGAAAGTATGTTAGCCTTCCCCTaGGACAGGTTACCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: MLAFPLDRLPGLQTVTESMLAFP*DRLPGL
Trigger: CAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACAT...ACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR TCA 72 bp TCTGTACGAAGCGACACTCCCACAGAAGGCAGTAGCTaGGTCTTCAGGGCAAGCTGTGCCAGAAGATCTTCT +
Preference number: 3 (lower is better)
Translates to: SVRSDTPTEGSS*VFRASCARRSS
Trigger: AGAAGATCTTCTGGCACAGCTTGCCCTGAAGACTCAGCTACTGCCTTCTGTGGGAGTGTCGCTTCGTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000068747.14
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp CTTCCACTTTCCCTCCCACCAGTGCTTAAGTCTCAGTaGGATCTGTCAAAAATCCTCCCTGCAGCCTCTGCT +
Preference number: 3 (lower is better)
Translates to: LPLSLPPVLKSQ*DLSKILPAASA
Trigger: AGCAGAGGCTGCAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAAGTGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGATACCCACAGCCACCTTaGGTTCTGCTTCTGCCTCTG +
Preference number: 3 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGYPQPP*VLLLPL
Trigger: CAGAGGCAGAAGCAGAACCAAAGGTGGCTGTGGGTA...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACACACCCCACCCCCATCCTTaGCTGCACCTTGCCACCCTT +
Preference number: 3 (lower is better)
Translates to: SSWNRKQTILASPASQYTPHPHP*LHLATL
Trigger: AAGGGTGGCAAGGTGCAGCAAAGGATGGGGGTGGGG...TGTGTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp ACAGAGGGGAACCTAAGGCTTGGATTTCCTGCAAAGCACCTAACACATGAAGACGAGGGCCAGAGTTTCTaGCTCAATCCTAGGATGGCC +
Preference number: 3 (lower is better)
Translates to: TEGNLRLGFPAKHLTHEDEGQSF*LNPRMA
Trigger: GGCCATCCTAGGATTGAGCAAGAAACTCTGGCCCTC...GTCTTCATGTGTTAGGTGCTTTGCAGGAAATCCAAGCCTTAGGTTCCCCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR TCA 72 bp CCTAAGGCTTGGATTTCCTGCAAAGCACCTAACACATaGAGACAGTCTCTGGGCAAGCAGGGTCTCAGCAAC +
Preference number: 3 (lower is better)
Translates to: PKAWISCKAPNT*RQSLGKQGLSN
Trigger: GTTGCTGAGACCCTGCTTGCCCAGAGACTGTCTTCATGTGTTAGGTGCTTTGCAGGAAATCCAAGCCTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 72 bp CCTGGACAACCTTGCTTCCACTTTCCCTCCCACCAGTaGTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCC +
Preference number: 3 (lower is better)
Translates to: PGQPCFHFPSHQ*LSLSGICQKSS
Trigger: GGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 72 bp ACAGGGAGAGAGACTTCGGGGATCAACTTTCTGTTCTaGTCAGCCCTCTCTTTCCATGGTTTGGGGCATGTT +
Preference number: 3 (lower is better)
Translates to: TGRETSGINFLF*SALSFHGLGHV
Trigger: AACATGCCCCAAACCATGGAAAGAGAGGGCTGAGCAGAACAGAAAGTTGATCCCCGAAGTCTCTCTCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp ACTAAGCACACAGAGGAACAAAGCCTGGAAGCGGACTaGCTGTGTGTTCACAAGGATACAAACACCACACGG +
Preference number: 3 (lower is better)
Translates to: TKHTEEQSLEAD*LCVHKDTNTTR
Trigger: CCGTGTGGTGTTTGTATCCTTGTGAACACACAGCCAGTCCGCTTCCAGGCTTTGTTCCTCTGTGTGCTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp AACTGGCTGGCCTGGCACCCGGGAACAGTAGCTATCTaGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCC +
Preference number: 3 (lower is better)
Translates to: NWLAWHPGTVAI*LFTQFKNSFLP
Trigger: GGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGCTACTGTTCCCGGGTGCCAGGCCAGCCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp TCCAGGACCTTAAGCAGCATACTTAAGTCCCCCACTTaGCTGCCATTTCTTCCTAGTAAGGTGGCCTCAAGC +
Preference number: 3 (lower is better)
Translates to: SRTLSSILKSPT*LPFLPSKVASS
Trigger: GCTTGAGGCCACCTTACTAGGAAGAAATGGCAGCCAAGTGGGGGACTTAAGTATGCTGCTTAAGGTCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp CCCTGGGCACTCTTGTGGAACCCAGGAGATAGTGGTTaGGCTGCACTGAAGGCAAATCAATGGCATGATATA +
Preference number: 3 (lower is better)
Translates to: PWALLWNPGDSG*AALKANQWHDI
Trigger: TATATCATGCCATTGATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGGGTTCCACAAGAGTGCCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GCTGTGTGTTCACAAGGATACAAACACCACACGGCATGTGCTAGTAGGGCTGCTATTTGGACGATGTACTaGACGCCACATCGACATGCT +
Preference number: 3 (lower is better)
Translates to: AVCSQGYKHHTACASRAAIWTMY*TPHRHA
Trigger: AGCATGTCGATGTGGCGTCAAGTACATCGTCCAAAT...AGCAGCCCTACTAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACACACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TTTTGCTGTGGAGACTGTAGGAAGAAGCACGGGTGTGAGCTGGCTGAGCCGAGGTCTAGCAAAACCAATTaGGCAGCACAAAAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: FCCGDCRKKHGCELAEPRSSKTN*AAQKGK
Trigger: TTTTCCCTTTTGTGCTGCCAAATTGGTTTTGCTAGA...CCTCGGCTCAGCCAGCTCACACCCGTGCTTCTTCCTACAGTCTCCACAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CCGCTCCAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGCCAGTGCGGGGTGGTaGGTGCCCAGAGCTGTAAAC +
Preference number: 3 (lower is better)
Translates to: PLQGLKSIKTTTEQLKQSASAGW*VPRAVN
Trigger: GTTTACAGCTCTGGGCACCAACCACCCCGCACTGGC...TGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTGGAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CACTGGCAAAGGCTGGAGTTAAGACCCATGAAAGGCAGCAGGGAGCTTACTGTAAACCAAAGCACAAACTaGTCCTCTGTACGAAGCGAC +
Preference number: 3 (lower is better)
Translates to: HWQRLELRPMKGSRELTVNQSTN*SSVRSD
Trigger: GTCGCTTCGTACAGAGGACAAGTTTGTGCTTTGGTT...TACAGTAAGCTCCCTGCTGCCTTTCATGGGTCTTAACTCCAGCCTTTGCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGATGGTCAATCCCTGTTaGTTATCCACAGGGACAGCA +
Preference number: 3 (lower is better)
Translates to: YCACHLGKAQAGRYIATQMVNPC*LSTGTA
Trigger: TGCTGTCCCTGTGGATAACAAACAGGGATTGACCAT...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GCTGTGTGTTCACAAGGATACAAACACCACACGGCATGTGCTAGTAGGGCTGCTATAGAAACAACATTCTaGGTTCCGGCCGGTTGGGAT +
Preference number: 3 (lower is better)
Translates to: AVCSQGYKHHTACASRAAIETTF*VPAGWD
Trigger: ATCCCAACCGGCCGGAACCAAGAATGTTGTTTCTAT...AGCAGCCCTACTAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACACACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TTGTGGAACCCAGGAGATAGTGGTTGGGCTGCACTGAAGGCAAATCAATGGCATTCAACAAAACCATCTTaGGCCTGGGGAGGGAACTGT +
Preference number: 3 (lower is better)
Translates to: LWNPGDSGWAALKANQWHSTKPS*AWGGNC
Trigger: ACAGTTCCCTCCCCAGGCCAAAGATGGTTTTGTTGA...ATGCCATTGATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGGGTTCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GCTATCTGGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCCTTACCCCAACTCACGCCCTGGGCACTCTaGTGGAACCCAGGAGATAGT +
Preference number: 3 (lower is better)
Translates to: AIWLFTQFKNSFLPLPQLTPWAL*WNPGDS
Trigger: ACTATCTCCTGGGTTCCACAAGAGTGCCCAGGGCGT...GAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR TCA 72 bp CTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCCTaGGGCTGGATGGTGCTACAAGAGAAGAGGGTAAGT +
Preference number: 3 (lower is better)
Translates to: LLYSHSSKSPRP*GWMVLQEKRVS
Trigger: ACTTACCCTCTTCTCTTGTAGCACCATCCAGCCTCAGGGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 72 bp TCAGTGGGATCTGTCAAAAATCCTCCCTGCAGCCTCTaGTCTTCACAGATCCATCCCTGTCTACTCATTTCC +
Preference number: 3 (lower is better)
Translates to: SVGSVKNPPCSL*SSQIHPCLLIS
Trigger: GGAAATGAGTAGACAGGGATGGATCTGTGAAGAGCAGAGGCTGCAGGGAGGATTTTTGACAGATCCCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp CTTCTTGACTGCTCTGCCCATGAACTGCACCCTTGTTaGCTAGAGATGCTGTTAAGAGTGTCTTATGTCCCC +
Preference number: 3 (lower is better)
Translates to: LLDCSAHELHPC*LEMLLRVSYVP
Trigger: GGGGACATAAGACACTCTTAACAGCATCTCTAGCCAACAAGGGTGCAGTTCATGGGCAGAGCAGTCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GCTGGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCAATTTGGACGATGTACTaGACGCCACATCGACATGCT +
Preference number: 3 (lower is better)
Translates to: AGNQKGSCRSRVSNPLKPIWTMY*TPHRHA
Trigger: AGCATGTCGATGTGGCGTCAAGTACATCGTCCAAAT...TGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCTACCCACAGCCACCTTaGGTTCTGCTTCTGCCTCTG +
Preference number: 3 (lower is better)
Translates to: YPQVFPELLLESKANYIGYPQPP*VLLLPL
Trigger: CAGAGGCAGAAGCAGAACCAAAGGTGGCTGTGGGTA...GCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TTTCCTGGACAACCTTGCTTCCACTTTCCCTCCCACCAGTGCTTAAGTCTCAGTCGAAAGCAAACTATATaGGCAAGCCCAGCTTCTCAG +
Preference number: 3 (lower is better)
Translates to: FPGQPCFHFPSHQCLSLSRKQTI*ASPASQ
Trigger: CTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCG...ACTGAGACTTAAGCACTGGTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGCGAAAGCAAACTATATaGGCAAGCCCAGCTTCTCAG +
Preference number: 3 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLRKQTI*ASPASQ
Trigger: CTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCG...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TTTCCTGGACAACCTTGCTTCCACTTTCCCTCCCACCAGTGCTTAAGTCTCAGTATGGTCAATCCCTGTTaGTTATCCACAGGGACAGCA +
Preference number: 3 (lower is better)
Translates to: FPGQPCFHFPSHQCLSLSMVNPC*LSTGTA
Trigger: TGCTGTCCCTGTGGATAACAAACAGGGATTGACCAT...ACTGAGACTTAAGCACTGGTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 72 bp AGGGATTTGGACGATGTACTTGACGCCACATCGACATaGTTTAGGCACAACGATGAACAAACGGCAGGAATC +
Preference number: 3 (lower is better)
Translates to: RDLDDVLDATST*FRHNDEQTAGI
Trigger: GATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CTGACCATGGCTCTGCTGGGGCAAGTGCTCCTTTTAGAAATCACAAGTAGGTATATTTGGACGATGTACTaGACGCCACATCGACATGCT +
Preference number: 3 (lower is better)
Translates to: LTMALLGQVLLLEITSRYIWTMY*TPHRHA
Trigger: AGCATGTCGATGTGGCGTCAAGTACATCGTCCAAAT...ATACCTACTTGTGATTTCTAAAAGGAGCACTTGCCCCAGCAGAGCCATGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp ACAGAGGGGAACCTAAGGCTTGGATTTCCTGCAAAGCACCTAACACATGAAGACCGAAAGCAAACTATATaGGCAAGCCCAGCTTCTCAG +
Preference number: 3 (lower is better)
Translates to: TEGNLRLGFPAKHLTHEDRKQTI*ASPASQ
Trigger: CTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCG...GTCTTCATGTGTTAGGTGCTTTGCAGGAAATCCAAGCCTTAGGTTCCCCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGATTCCCAGAGCTCCTCTaGGAATCGAAAGCAAACTAT +
Preference number: 3 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGFPELL*ESKANY
Trigger: ATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAA...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCATGGTCAATCCCTGTTaGTTATCCACAGGGACAGCA +
Preference number: 3 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTMVNPC*LSTGTA
Trigger: TGCTGTCCCTGTGGATAACAAACAGGGATTGACCAT...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGATTAGGAAAGTTTCATTaGGTCCTGGAGCACAGGACA +
Preference number: 3 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGLGKFH*VLEHRT
Trigger: TGTCCTGTGCTCCAGGACCAAATGAAACTTTCCTAA...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TTGTGGAACCCAGGAGATAGTGGTTGGGCTGCACTGAAGGCAAATCAATGGCATGGTGGGGTCACTCCTTaGCTTCTAATATCATTAGGA +
Preference number: 3 (lower is better)
Translates to: LWNPGDSGWAALKANQWHGGVTP*LLISLG
Trigger: TCCTAATGATATTAGAAGCAAAGGAGTGACCCCACC...ATGCCATTGATTTGCCTTCAGTGCAGCCCAACCACTATCTCCTGGGTTCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TATTGTGCTTGTCACCTAGGGAAAGCGCAGGCAGGCAGGTATATTGCCACTCAGTCTAGCAAAACCAATTaGGCAGCACAAAAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: YCACHLGKAQAGRYIATQSSKTN*AAQKGK
Trigger: TTTTCCCTTTTGTGCTGCCAAATTGGTTTTGCTAGA...CTGAGTGGCAATATACCTGCCTGCCTGCGCTTTCCCTAGGTGACAAGCACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGAATCACGACTTTGAGTaGATTGAATCCCGTTGTTGC +
Preference number: 3 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLNHDFE*IESRCC
Trigger: GCAACAACGGGATTCAATCAACTCAAAGTCGTGATT...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GCTATCTGGCTCTTCACCCAATTTAAAAACAGTTTCTTGCCCTTACCCCAACTCCAAGGTGGACTGGTGTaGGTCCTTCTCAACAAACTG +
Preference number: 3 (lower is better)
Translates to: AIWLFTQFKNSFLPLPQLQGGLV*VLLNKL
Trigger: CAGTTTGTTGAGAAGGACCAACACCAGTCCACCTTG...GAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAATTGGGTGAAGAGCCAGATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACATGGTCAATCCCTGTTaGTTATCCACAGGGACAGCA +
Preference number: 3 (lower is better)
Translates to: SSSWNRKQTILASPASQYMVNPC*LSTGTA
Trigger: TGCTGTCCCTGTGGATAACAAACAGGGATTGACCAT...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCTTAGGAAAGTTTCATTaGGTCCTGGAGCACAGGACA +
Preference number: 3 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTLGKFH*VLEHRT
Trigger: TGTCCTGTGCTCCAGGACCAAATGAAACTTTCCTAA...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp AGCATTAATGTTAGCCTTCCCCTTGGACAGGTTACCTaGGCTGCAAACGGTCACAGAAAGTCAGTAGTTTCA +
Preference number: 3 (lower is better)
Translates to: SINVSLPLGQVT*AANGHRKSVVS
Trigger: TGAAACTACTGACTTTCTGTGACCGTTTGCAGCCCAGGTAACCTGTCCAAGGGGAAGGCTAACATTAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp TTTCCTGCAAAGCACCTAACACATGAAGACAGTCTCTaGGCAAGCAGGGTCTCAGCAACAAAAGATGCTAAC +
Preference number: 3 (lower is better)
Translates to: FPAKHLTHEDSL*ASRVSATKDAN
Trigger: GTTAGCATCTTTTGTTGCTGAGACCCTGCTTGCCCAGAGACTGTCTTCATGTGTTAGGTGCTTTGCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TATCCACAGGTTTTCCCAGAGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCATTTGGACGATGTACTaGACGCCACATCGACATGCT +
Preference number: 3 (lower is better)
Translates to: YPQVFPELLLESKANYIGIWTMY*TPHRHA
Trigger: AGCATGTCGATGTGGCGTCAAGTACATCGTCCAAAT...GCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAAAACCTGTGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp AAGCTAAGACACCTCACCCACTCACCCACCCCGTACCTCATTAGACTTAGTTCTTCTAGCAAAACCAATTaGGCAGCACAAAAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: KLRHLTHSPTPYLIRLSSSSKTN*AAQKGK
Trigger: TTTTCCCTTTTGTGCTGCCAAATTGGTTTTGCTAGA...AGAACTAAGTCTAATGAGGTACGGGGTGGGTGAGTGGGTGAGGTGTCTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACACACGAAAGCAAACTATATaGGCAAGCCCAGCTTCTCAG +
Preference number: 3 (lower is better)
Translates to: SSWNRKQTILASPASQYTRKQTI*ASPASQ
Trigger: CTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCG...TGTGTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GAAGGTGATACATACGAAGGTGTGAAGAAACAGCAGGAAACATGCACAACTTGTCAAGGTGGACTGGTGTaGGTCCTTCTCAACAAACTG +
Preference number: 3 (lower is better)
Translates to: EGDTYEGVKKQQETCTTCQGGLV*VLLNKL
Trigger: CAGTTTGTTGAGAAGGACCAACACCAGTCCACCTTG...ACAAGTTGTGCATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTATCACCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CAACAGACTCAACTTATCACTATAAGAGAACAGCTGTCCCAGCATCAATGGGATCAAGGTGGACTGGTGTaGGTCCTTCTCAACAAACTG +
Preference number: 3 (lower is better)
Translates to: QQTQLITIREQLSQHQWDQGGLV*VLLNKL
Trigger: CAGTTTGTTGAGAAGGACCAACACCAGTCCACCTTG...ATCCCATTGATGCTGGGACAGCTGTTCTCTTATAGTGATAAGTTGAGTCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACTTAGGAAAGTTTCATTaGGTCCTGGAGCACAGGACA +
Preference number: 3 (lower is better)
Translates to: SSSWNRKQTILASPASQYLGKFH*VLEHRT
Trigger: TGTCCTGTGCTCCAGGACCAAATGAAACTTTCCTAA...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp AAACCCATTTCCCTCTTCCTCAAGGTGGACTGGTGTTaGTCCTTCTCAACAAACTGGTTACAAACACAGCAA +
Preference number: 3 (lower is better)
Translates to: KPISLFLKVDWC*SFSTNWLQTQQ
Trigger: TTGCTGTGTTTGTAACCAGTTTGTTGAGAAGGACCAACACCAGTCCACCTTGAGGAAGAGGGAAATGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp ATAAAAATAGAAACAACATTCTTGGTTCCGGCCGGTTaGGATTCTGAGCAGTGCCTGCCCAACCTAGCATTT +
Preference number: 3 (lower is better)
Translates to: IKIETTFLVPAG*DSEQCLPNLAF
Trigger: AAATGCTAGGTTGGGCAGGCACTGCTCAGAATCCCAACCGGCCGGAACCAAGAATGTTGTTTCTATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp GTGCTCCTTTTAGAAATCACAAGTAGGTATGAAGTTTaGGGTCTGTTCCAAAGGTGGGGTCACTCCTTTGCT +
Preference number: 3 (lower is better)
Translates to: VLLLEITSRYEV*GLFQRWGHSFA
Trigger: AGCAAAGGAGTGACCCCACCTTTGGAACAGACCCCAAACTTCATACCTACTTGTGATTTCTAAAAGGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TCATTTCCTCTAGCCTCTCCTCCTCTATTCACATTCTTCCAAGTCCCCAAGACCTCTAGCAAAACCAATTaGGCAGCACAAAAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: SFPLASPPLFTFFQVPKTSSKTN*AAQKGK
Trigger: TTTTCCCTTTTGTGCTGCCAAATTGGTTTTGCTAGA...GGTCTTGGGGACTTGGAAGAATGTGAATAGAGGAGGAGAGGCTAGAGGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CAGGGTCTCAAATCCATTAAAACCACTACGGAACAATTAAAACAATCAGAGAGATACCCACAGCCACCTTaGGTTCTGCTTCTGCCTCTG +
Preference number: 3 (lower is better)
Translates to: QGLKSIKTTTEQLKQSERYPQPP*VLLLPL
Trigger: CAGAGGCAGAAGCAGAACCAAAGGTGGCTGTGGGTA...TCTCTCTGATTGTTTTAATTGTTCCGTAGTGGTTTTAATGGATTTGAGACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GTCAGTTTTTGCACAAACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAATACCCACAGCCACCTTaGGTTCTGCTTCTGCCTCTG +
Preference number: 3 (lower is better)
Translates to: VSFCTNYRKQRGEGDTYEYPQPP*VLLLPL
Trigger: CAGAGGCAGAAGCAGAACCAAAGGTGGCTGTGGGTA...TTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTTTGTGCAAAAACTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TTTCCTGGACAACCTTGCTTCCACTTTCCCTCCCACCAGTGCTTAAGTCTCAGTTTTAAAAACAGTTTCTaGCCCTTACCCCAACTCTAT +
Preference number: 3 (lower is better)
Translates to: FPGQPCFHFPSHQCLSLSFKNSF*PLPQLY
Trigger: ATAGAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAA...ACTGAGACTTAAGCACTGGTGGGAGGGAAAGTGGAAGCAAGGTTGTCCAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TTTCCCTCCCACCAGTGCTTAAGTCTCAGTGGGATCTGTCAAAAATCCTCCCTGTTTAAAAACAGTTTCTaGCCCTTACCCCAACTCTAT +
Preference number: 3 (lower is better)
Translates to: FPSHQCLSLSGICQKSSLFKNSF*PLPQLY
Trigger: ATAGAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAA...CAGGGAGGATTTTTGACAGATCCCACTGAGACTTAAGCACTGGTGGGAGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GATGGTCAATCCCTGTTTGTTATCCACAGGGACAGCATGACAAGGAGAGTCCCTTTTAAAAACAGTTTCTaGCCCTTACCCCAACTCTAT +
Preference number: 3 (lower is better)
Translates to: DGQSLFVIHRDSMTRRVPFKNSF*PLPQLY
Trigger: ATAGAGTTGGGGTAAGGGCAAGAAACTGTTTTTAAA...AGGGACTCTCCTTGTCATGCTGTCCCTGTGGATAACAAACAGGGATTGACCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACACATTCCCAGAGCTCCTCTaGGAATCGAAAGCAAACTAT +
Preference number: 3 (lower is better)
Translates to: SSWNRKQTILASPASQYTFPELL*ESKANY
Trigger: ATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAA...TGTGTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp ACAGGGGAAAGTTCAAAAGGACATGAAGGACACCAAGAGAACATCCAACTGCCAAATCACGACTTTGAGTaGATTGAATCCCGTTGTTGC +
Preference number: 3 (lower is better)
Translates to: TGESSKGHEGHQENIQLPNHDFE*IESRCC
Trigger: GCAACAACGGGATTCAATCAACTCAAAGTCGTGATT...TGGCAGTTGGATGTTCTCTTGGTGTCCTTCATGTCCTTTTGAACTTTCCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CAACAGACTCAACTTATCACTATAAGAGAACAGCTGTCCCAGCATCAATGGGATAACCAAAGCACAAACTaGTCCTCTGTACGAAGCGAC +
Preference number: 3 (lower is better)
Translates to: QQTQLITIREQLSQHQWDNQSTN*SSVRSD
Trigger: GTCGCTTCGTACAGAGGACAAGTTTGTGCTTTGGTT...ATCCCATTGATGCTGGGACAGCTGTTCTCTTATAGTGATAAGTTGAGTCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR GCA 72 bp ACTAATCATATATTTATAGGGCTACCTCTGCTCAGATaGACATTCCCACAGCTTCTCTTAGAGCAGGAGAGC +
Preference number: 3 (lower is better)
Translates to: TNHIFIGLPLLR*TFPQLLLEQES
Trigger: GCTCTCCTGCTCTAAGAGAAGCTGTGGGAATGTGCATCTGAGCAGAGGTAGCCCTATAAATATATGATTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp TTGTCTTTAAAACTAAGCACACAGAGGAACAAAGCCTaGAAGCGGACTGGCTGTGTGTTCACAAGGATACAA +
Preference number: 3 (lower is better)
Translates to: LSLKLSTQRNKA*KRTGCVFTRIQ
Trigger: TTGTATCCTTGTGAACACACAGCCAGTCCGCTTCCAGGCTTTGTTCCTCTGTGTGCTTAGTTTTAAAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp GAAGGTGATACATACGAAGGTGTGAAGAAACAGCAGGAAACATGCACAACTTGTTTCCCAGAGCTCCTCTaGGAATCGAAAGCAAACTAT +
Preference number: 3 (lower is better)
Translates to: EGDTYEGVKKQQETCTTCFPELL*ESKANY
Trigger: ATAGTTTGCTTTCGATTCCAAGAGGAGCTCTGGGAA...ACAAGTTGTGCATGTTTCCTGCTGTTTCTTCACACCTTCGTATGTATCACCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp CTGACCATGGCTCTGCTGGGGCAAGTGCTCCTTTTAGAAATCACAAGTAGGTATTCCAACATTTGGCATTaGGTTTTATCCACAGGTTTT +
Preference number: 3 (lower is better)
Translates to: LTMALLGQVLLLEITSRYSNIWH*VLSTGF
Trigger: AAAACCTGTGGATAAAACCAAATGCCAAATGTTGGA...ATACCTACTTGTGATTTCTAAAAGGAGCACTTGCCCCAGCAGAGCCATGGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp TTATGGGAACACAGCTTTTGGAGTACCTTCATTAAGGAATCAGAAATGCACTTCCAAGGTGGACTGGTGTaGGTCCTTCTCAACAAACTG +
Preference number: 3 (lower is better)
Translates to: LWEHSFWSTFIKESEMHFQGGLV*VLLNKL
Trigger: CAGTTTGTTGAGAAGGACCAACACCAGTCCACCTTG...GAAGTGCATTTCTGATTCCTTAATGAAGGTACTCCAAAAGCTGTGTTCCCATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR TCA 72 bp ACAAACACCACACGGCATGTGCTAGTAGGGCTGCTCTaGGACAGTTACAAAGAATTGGAATCACAAAATCAA +
Preference number: 3 (lower is better)
Translates to: TNTTRHVLVGLL*DSYKELESQNQ
Trigger: TTGATTTTGTGATTCCAATTCTTTGTAACTGTCTCAGAGCAGCCCTACTAGCACATGCCGTGTGGTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp AACTATAGAAAACAGAGAGGTGAAGGTGATACATACGAAGGTGTGAAGAAACAGCGAAAGCAAACTATATaGGCAAGCCCAGCTTCTCAG +
Preference number: 3 (lower is better)
Translates to: NYRKQRGEGDTYEGVKKQRKQTI*ASPASQ
Trigger: CTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCG...CTGTTTCTTCACACCTTCGTATGTATCACCTTCACCTCTCTGTTTTCTATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp AGCTCCTCTTGGAATCGAAAGCAAACTATATTGGCAAGCCCAGCTTCTCAGTACTCCAACATTTGGCATTaGGTTTTATCCACAGGTTTT +
Preference number: 3 (lower is better)
Translates to: SSSWNRKQTILASPASQYSNIWH*VLSTGF
Trigger: AAAACCTGTGGATAAAACCAAATGCCAAATGTTGGA...GTACTGAGAAGCTGGGCTTGCCAATATAGTTTGCTTTCGATTCCAAGAGGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000005643.14
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111448.2
ENSMUST00000111449.8
ENSMUST00000111451.10
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR TCA 72 bp TGTGGCCAGAGAAGGAGGCAACATTCCTTGGTGTTATaGACTTCCATATACTTTCTACAAAAGAGACTACTG +
Preference number: 3 (lower is better)
Translates to: CGQRRRQHSLVL*TSIYFLQKRLL
Trigger: CAGTAGTCTCTTTTGTAGAAAGTATATGGAAGTTCATAACACCAAGGAATGTTGCCTCCTTCTCTGGCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp TTCTTGAATACTAGGCTCTGCTCAAATATAGCAAAGTaGCTTGAAGTGACCTTGATTCAGGCACACCAAGAA +
Preference number: 3 (lower is better)
Translates to: FLNTRLCSNIAK*LEVTLIQAHQE
Trigger: TTCTTGGTGTGCCTGAATCAAGGTCACTTCAAGCCACTTTGCTATATTTGAGCAGAGCCTAGTATTCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR CCA 72 bp ACAAGTAGGTATGAAGTTTGGGGTCTGTTCCAAAGGTaGGGTCACTCCTTTGCTTCTAATATCATTAGGAAA +
Preference number: 3 (lower is better)
Translates to: TSRYEVWGLFQR*GHSFASNIIRK
Trigger: TTTCCTAATGATATTAGAAGCAAAGGAGTGACCCCACCTTTGGAACAGACCCCAAACTTCATACCTACTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000068726.13
ENSMUST00000068747.14
ENSMUST00000111452.8
ENSMUST00000111455.9
ENSMUST00000177642.8
3UTR-3UTR CAA 90 bp