Pregenerated sensors for CELA3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023433Ensembl transcript IDs: ENSMUST00000102522.5
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | AGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAACCTTGGAAAGCTGGTCACACCGTaGACCTGCCAGGTGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: RSLFFRGPGGPLCQPNLGKLVTP*TCQVPL Trigger: CAATGGCACCTGGCAGGTCCACGGTGTGACCAGCTT...TCCAAGGTTCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR TCA 90 bp | TTTCAGAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGACAGCTGGGCACTTCTTaGGAGCTTGACCAGGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: FQKGLYSLEDLGVLSASRQLGTS*ELDQGD Trigger: ATCGCCCTGGTCAAGCTCTCAAGAAGTGCCCAGCTG...TCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTCTGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR TCA 90 bp | TTTCAGAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAAGGCTGAGACACGGGTaGACACTGTGGGCTTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: FQKGLYSLEDLGVLSASRRLRHG*TLWASS Trigger: TGAGGAAGCCCACAGTGTTCACCCGTGTCTCAGCCT...TCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTCTGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR CCA 90 bp | TCAGAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAACGAGCCACCACAGGTATaGTGGAAGCTCCCATCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SERSLFFRGPGGPLCQPNEPPQV*WKLPSF Trigger: GAAGGATGGGAGCTTCCACCATACCTGTGGTGGCTC...GTTCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR CCA 90 bp | GAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAACCTTGGGATCACCTGTTCTTaGCCTTCCTCCACACCACGT | + |
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Preference number: 4 (lower is better) Translates to: ERSLFFRGPGGPLCQPNLGITCS*PSSTPR Trigger: ACGTGGTGTGGAGGAAGGCCAAGAACAGGTGATCCC...AAGGTTCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR CCA 90 bp | GACTTTCAGAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCAGGAGGACACAAAGCTaGTCACACCGTGGACCTGCC | + |
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Preference number: 4 (lower is better) Translates to: DFQKGLYSLEDLGVLSASRRTQS*SHRGPA Trigger: GGCAGGTCCACGGTGTGACCAGCTTTGTGTCCTCCT...GCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTCTGAAAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR TCA 90 bp | GAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAACCTTAGAGGTCTCCAGCGTTaGTGGGGATCACCTGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: ERSLFFRGPGGPLCQPNLRGLQR*WGSPVL Trigger: AAGAACAGGTGATCCCCATCAACGCTGGAGACCTCT...AAGGTTCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR TCA 90 bp | CTTTCAGAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGCCAGTCAATGAAGGCTaGGACACGGGTGAACACTGT | + |
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Preference number: 4 (lower is better) Translates to: LSERSLFFRGPGGPLCQPPVNEG*DTGEHC Trigger: ACAGTGTTCACCCGTGTCTCAGCCTTCATTGACTGG...CGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTCTGAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR GCA 90 bp | GGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAACCTTGGATGTACAACCTGGTAGGTaGGAGAAGTCGAGATGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GLYSLEDLGVLSASRTLDVQPGR*EKSRCS Trigger: ACTGCATCTCGACTTCTCGCACCTACCAGGTTGTAC...ATCCAAGGTTCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR GCA 90 bp | GGACTTTCAGAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGGAGTTCCACTTGGGGTaGACAAAGAGGTCTCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: GLSERSLFFRGPGGPLCQEFHLG*TKRSPA Trigger: CGCTGGAGACCTCTTTGTGCACCCCAAGTGGAACTC...CTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTCTGAAAGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR GCA 90 bp | TTTCAGAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAGCTTCCTCAGGGTGTTaGAGCCCAAGGAGGACACAA | + |
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Preference number: 4 (lower is better) Translates to: FQKGLYSLEDLGVLSASRASSGC*SPRRTQ Trigger: TTGTGTCCTCCTTGGGCTGCAACACCCTGAGGAAGC...TCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTCTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR CCA 90 bp | TGGGACTTTCAGAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCCTGCTGCAGCTTGTCTaGCAGAGGTCCATTGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: WDFQKGLYSLEDLGVLSALLQLV*QRSIGG Trigger: TCCACCAATGGACCTCTGCCAGACAAGCTGCAGCAG...GGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTCTGAAAGTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR CAA 90 bp | AGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAACCTTGGAACTCGGCTGGAGGGGTaGTGGGAAGGCTGTCCACAG | + |
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Preference number: 5 (lower is better) Translates to: RSLFFRGPGGPLCQPNLGTRLEG*WEGCPQ Trigger: CTGTGGACAGCCTTCCCACAACCCCTCCAGCCGAGT...TCCAAGGTTCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR CAA 90 bp | AGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAACCTTGGAAAGGCCTGCTGCAGCTaGTCTGGCAGAGGTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: RSLFFRGPGGPLCQPNLGKACCS*SGRGPL Trigger: CAATGGACCTCTGCCAGACAAGCTGCAGCAGGCCTT...TCCAAGGTTCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR CAA 90 bp | GACTTTCAGAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCACAGCTTCCTCGCCATaGACAACTCGGCTGGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: DFQKGLYSLEDLGVLSASTASSP*TTRLEG Trigger: CCCCTCCAGCCGAGTTGTCAATGGCGAGGAAGCTGT...GCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTCTGAAAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR CAA 90 bp | GACTTTCAGAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCGGCTTCCTCAGGGTGTaGCAGCCCAAGGAGGACACA | + |
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Preference number: 5 (lower is better) Translates to: DFQKGLYSLEDLGVLSASGFLRV*QPKEDT Trigger: TGTGTCCTCCTTGGGCTGCAACACCCTGAGGAAGCC...GCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTCTGAAAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR CAA 90 bp | AAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAACCTTGAAGAGGTCTCCAGCGTaGATGGGGATCACCTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: KGLYSLEDLGVLSASRTLKRSPA*MGITCS Trigger: AGAACAGGTGATCCCCATCAACGCTGGAGACCTCTT...CAAGGTTCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS-3UTR CAA 90 bp | AAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAACCTTGACCAGGGCGATGTCATaGCCACAGCTCACACACATA | + |
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Preference number: 5 (lower is better) Translates to: KGLYSLEDLGVLSASRTLTRAMS*PQLTHI Trigger: TATGTGTGTGAGCTGTGGCAATGACATCGCCCTGGT...CAAGGTTCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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| CDS TCA 72 bp | CCACAGGTATGGTGGAAGCTCCCATCCTTCTCATACTaGAGGGAGACCTGCCAGGGCCAGCTGTGGGGAACA | + |
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Preference number: 6 (lower is better) Translates to: PQVWWKLPSFSY*RETCQGQLWGT Trigger: TGTTCCCCACAGCTGGCCCTGGCAGGTCTCCCTTCAGTATGAGAAGGATGGGAGCTTCCACCATACCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102522.5 |
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