Pregenerated sensors for CELA3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078520Ensembl transcript IDs: ENSMUST00000024200.7
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAACGCCGGCCCCAGCCGCTaGTGTAACAGGGTGCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: FKRSLFFRGPGGPLCQPNAGPSR*CNRVLR Trigger: ACGGAGCACCCTGTTACATCAGCGGCTGGGGCCGGC...GTTCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR CCA 90 bp | CTTTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGACGGCTGGAGGGGTTGTaGGAAGGCTGTCCACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LSKGLYSLEDLGVLSASRRLEGL*EGCPQP Trigger: AGGCTGTGGACAGCCTTCCCACAACCCCTCCAGCCG...TCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR TCA 90 bp | TTGGGACTTTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGGCTGTCCACAGCCTaGGGCAAGGGCCACAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LGLSKGLYSLEDLGVLSARLSTA*GKGHKQ Trigger: CTGCTTGTGGCCCTTGCCTCAGGCTGTGGACAGCCT...GGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAAAGTCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR TCA 90 bp | CTTTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGACCACCCATCTCATACTaGAGGGAGACCTGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LSKGLYSLEDLGVLSASRPPISY*RETCQG Trigger: GCCCTGGCAGGTCTCCCTTCAGTATGAGATGGGTGG...TCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR GCA 90 bp | ACTTTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGGGCAGCAAGGCCTGCTaGAGCTTGGTTGGCAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: TFKRSLFFRGPGGPLCQPGSKAC*SLVGRG Trigger: ACCTCTGCCAACCAAGCTGCAGCAGGCCTTGCTGCC...CGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR TCA 90 bp | ACTTTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGCAGCTGGGCACTTCTTaGGAGCTTGACCAGAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: TFKRSLFFRGPGGPLCQPQLGTS*ELDQSD Trigger: ATCGCTCTGGTCAAGCTCTCAAGAAGTGCCCAGCTG...CGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR TCA 90 bp | TCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAACCAGGCTGAGACACGGGTaGACATTGTGGGCTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SKGLYSLEDLGVLSASRTRLRHG*TLWASS Trigger: TGAAGAAGCCCACAATGTTCACCCGTGTCTCAGCCT...GGTTCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR GCA 90 bp | TTGGGACTTTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCACAGGCAGCAAGGCCTaGTGCAGCTTGGTTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LGLSKGLYSLEDLGVLSATGSKA*CSLVGR Trigger: TCTGCCAACCAAGCTGCAGCAGGCCTTGCTGCCTGT...GGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAAAGTCCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR GCA 90 bp | ACTTTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGCCTCCAGAGTCACCCTaGAATGGAGACAAGAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: TFKRSLFFRGPGGPLCQPPPESP*NGDKSR Trigger: CCGACTCTTGTCTCCATTGCAGGGTGACTCTGGAGG...CGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR CCA 90 bp | TCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAACCCTGCTGCAGCTTGGTTaGCAGAGGTCCATTGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: SKGLYSLEDLGVLSASRTLLQLG*QRSIGR Trigger: TCTACCAATGGACCTCTGCCAACCAAGCTGCAGCAG...GGTTCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR CCA 90 bp | CTTGGGACTTTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCAGGCCTGCTGCAGCTTaGTTGGCAGAGGTCCATTGG | + |
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Preference number: 4 (lower is better) Translates to: LGTFKRSLFFRGPGGPLCRPAAA*LAEVHW Trigger: CCAATGGACCTCTGCCAACCAAGCTGCAGCAGGCCT...GCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAAAGTCCCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR CCA 90 bp | ACTTTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGCCCACCAGTCCCACCTaGAGCAGTGTTCATAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TFKRSLFFRGPGGPLCQPPTSPT*SSVHSP Trigger: TGGACTATGAACACTGCTCCAGGTGGGACTGGTGGG...CGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR TCA 90 bp | TCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAACCCCAGTCAATGAAGGCTaGGACACGGGTGAACATTGT | + |
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Preference number: 4 (lower is better) Translates to: SKGLYSLEDLGVLSASRTPVNEG*DTGEHC Trigger: ACAATGTTCACCCGTGTCTCAGCCTTCATTGACTGG...GGTTCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR GCA 90 bp | AACTTGGGACTTTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCTTCTTCAGGGTGTTaGAGCCCGAGGGGGACACGA | + |
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Preference number: 4 (lower is better) Translates to: NLGLSKGLYSLEDLGVLSASSGC*SPRGTR Trigger: TCGTGTCCCCCTCGGGCTGCAACACCCTGAAGAAGC...AGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAAAGTCCCAAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR CCA 90 bp | CAACTTGGGACTTTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCGAGCCACCACAGGTATaGTGGAAGCTCCCACCCATC | + |
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Preference number: 4 (lower is better) Translates to: QLGTFKRSLFFRGPGGPLEPPQV*WKLPPI Trigger: GATGGGTGGGAGCTTCCACCATACCTGTGGTGGCTC...GAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAAAGTCCCAAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR GCA 90 bp | ACTTTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGGAGTTCCACTTGGGGTaGACAAAGAGTTCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: TFKRSLFFRGPGGPLCQPEFHLG*TKSSPA Trigger: TGCTGGAGAACTCTTTGTGCACCCCAAGTGGAACTC...CGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR GCA 90 bp | TTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAACCCAGAGCGATGTTATTaGCACAGTTCACACATTCGG | + |
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Preference number: 4 (lower is better) Translates to: FKRSLFFRGPGGPLCQPNPERCY*HSSHIR Trigger: CCGAATGTGTGAACTGTGGCAATAACATCGCTCTGG...GTTCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR CCA 90 bp | GGACTTTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCATTCGGAGTTCCACTTaGGGTGCACAAAGAGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: GLSKGLYSLEDLGVLSASIRSST*GAQRVL Trigger: GAGAACTCTTTGTGCACCCCAAGTGGAACTCCGAAT...GCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAAAGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR CCA 90 bp | CAACTTGGGACTTTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCACTGCATCTCCCAGCTaGGCACTTCTTGAGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: QLGTFKRSLFFRGPGGPLTASPS*ALLESL Trigger: CAAGCTCTCAAGAAGTGCCCAGCTGGGAGATGCAGT...GAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAAAGTCCCAAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR CAA 90 bp | TCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCTGCCAGCCGAACCAAGGCCTGCTGCAGCTaGGTTGGCAGAGGTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: SKGLYSLEDLGVLSASRTKACCS*VGRGPL Trigger: CAATGGACCTCTGCCAACCAAGCTGCAGCAGGCCTT...GGTTCGGCTGGCAGAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS-3UTR CAA 90 bp | CAACTTGGGACTTTCAAAAGGTCTTTATTCTTTAGAGGACCTGGGGGTCCTCTCGCACTTCTTGAGAGCTaGACCAGAGCGATGTTATTG | + |
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Preference number: 5 (lower is better) Translates to: QLGTFKRSLFFRGPGGPLALLES*TRAMLL Trigger: CAATAACATCGCTCTGGTCAAGCTCTCAAGAAGTGC...GAGAGGACCCCCAGGTCCTCTAAAGAATAAAGACCTTTTGAAAGTCCCAAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS CCA 72 bp | AGGAGTGGGCTTGGATGTAGCCGCCGGCGCACACCATaGTCCTCTTCACATAGTGGCCCCACCAGTCCCACC | + |
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Preference number: 6 (lower is better) Translates to: RSGLGCSRRRTP*SSSHSGPTSPT Trigger: GGTGGGACTGGTGGGGCCACTATGTGAAGAGGACCATGGTGTGCGCCGGCGGCTACATCCAAGCCCACTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS CAA 90 bp | CTGTGGGGAACAGCTTCCTCGCCATTGACAACTCGGCTGGAGGGGTaGTGGGAAGGCTGTCCACAGCCTGAGGCAAGGGCCACAAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LWGTASSPLTTRLEG*WEGCPQPEARATSR Trigger: CCTGCTTGTGGCCCTTGCCTCAGGCTGTGGACAGCCTTCCCACAACCCCTCCAGCCGAGTTGTCAATGGCGAGGAAGCTGTTCCCCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS CAA 90 bp | ATGAAGGCTGAGACACGGGTGAACATTGTGGGCTTCTTCAGGGTGTaGCAGCCCGAGGGGGACACGAAGCTGGCTATACCATGGACCTGC | + |
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Preference number: 6 (lower is better) Translates to: MKAETRVNIVGFFRV*QPEGDTKLAIPWTC Trigger: GCAGGTCCATGGTATAGCCAGCTTCGTGTCCCCCTCGGGCTGCAACACCCTGAAGAAGCCCACAATGTTCACCCGTGTCTCAGCCTTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS TCA 72 bp | CCAGAGTCACCCTGCAATGGAGACAAGAGTCGGGGCTaGTGTGTGTCTGAAGATAAGGAGTGGGCTTGGATG | + |
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Preference number: 6 (lower is better) Translates to: PESPCNGDKSRG*CVSEDKEWAWM Trigger: CATCCAAGCCCACTCCTTATCTTCAGACACACATCAGCCCCGACTCTTGTCTCCATTGCAGGGTGACTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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| CDS GCA 72 bp | TTGCCACAGTTCACACATTCGGAGTTCCACTTGGGGTaGACAAAGAGTTCTCCAGCATTGATGGGGATCACC | + |
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Preference number: 6 (lower is better) Translates to: LPQFTHSEFHLG*TKSSPALMGIT Trigger: GGTGATCCCCATCAATGCTGGAGAACTCTTTGTGCACCCCAAGTGGAACTCCGAATGTGTGAACTGTGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024200.7 |
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