Pregenerated sensors for CELA2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058579Ensembl transcript IDs: ENSMUST00000102481.4
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCTCCGGAGGAAAGGACCTaGAGGGAGACCTGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LLLFLFYGISRGTVAVMSPEERT*RETCQG Trigger: GCCCTGGCAGGTCTCCCTGCAGGTCCTTTCCTCCGG...AGACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR TCA 90 bp | TTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCTTCATTGGGTGTGGCCTCTTaGCCCCCAACTACCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LLFLFYGISRGTVAVMSSLGVAS*PPTTLL Trigger: GAGCAGGGTAGTTGGGGGTCAAGAGGCCACACCCAA...TGAAGACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR GCA 90 bp | TTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCTTCACTGTTCCCATTGGTCTaGAGCAGGCCCCAGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LLFLFYGISRGTVAVMSSLFPLV*SRPQPV Trigger: CACAGGCTGGGGCCTGCTGCAGACCAATGGGAACAG...TGAAGACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR GCA 90 bp | TTTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCGTTGGAGAGGCTGTGTaGGCCCAGCAGCACTCGGTA | + |
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Preference number: 4 (lower is better) Translates to: FITISFLWHFQGDSGSNVVGEAV*AQQHSV Trigger: TACCGAGTGCTGCTGGGCGCACACAGCCTCTCCAAC...GACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR GCA 90 bp | TTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCTTTCTCGGGAGAATGGTaGCAGCGGGTGGGAGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LLLFLFYGISRGTVAVMSFSGEW*QRVGGK Trigger: CTTGCCTCCCACCCGCTGGCACCATTCTCCCGAGAA...AGACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR GCA 90 bp | ACTTTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGAGCCGAAGCTCACGATaGCATGCACCTGCCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: TLLLFLFYGISRGTVAVMSRSSR*HAPATG Trigger: GCCAGTGGCAGGTGCATGGCATCGTGAGCTTCGGCT...CATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR CCA 90 bp | ACTTTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGCAGGACTGTTCCCATTaGTCTGCAGCAGGCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TLLLFLFYGISRGTVAVMQDCSH*SAAGPS Trigger: GCTGGGGCCTGCTGCAGACCAATGGGAACAGTCCTG...CATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR CCA 90 bp | TTTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCGCCAGGTGTTGGGTGTaGCCTCTTGACCCCCAACTA | + |
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Preference number: 4 (lower is better) Translates to: FITISFLWHFQGDSGSNVARCWV*PLDPQL Trigger: TAGTTGGGGGTCAAGAGGCCACACCCAACACCTGGC...GACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR CCA 90 bp | TACTTTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATTCAGAACCCAGTTGTTaGCCACCAGGGAGCCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: YFITISFLWHFQGDSGSNSEPSC*PPGSLR Trigger: GCGGAGGCTCCCTGGTGGCCAACAACTGGGTTCTGA...ATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAAAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR CCA 90 bp | ATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCTTCCCATTGCCGACGTTTTaGGAGTTCCACCTCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ITISFLWHFQGDSGSNVFPLPTF*EFHLWW Trigger: CCACCAGAGGTGGAACTCCCAAAACGTCGGCAATGG...GAAGACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR TCA 90 bp | TTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCTGCAGGCCCCAGCCTGTaGCATAGCAGACATAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LLLFLFYGISRGTVAVMSAGPSL*HSRHSF Trigger: GAAACTATGTCTGCTATGTCACAGGCTGGGGCCTGC...AGACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR GCA 90 bp | TTTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCCCACTGGCCATTAGATaGCCGGCAATTCAGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: FITISFLWHFQGDSGSNVPLAIR*PAIQWS Trigger: GGACCACTGAATTGCCGGGCATCTAATGGCCAGTGG...GACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR GCA 90 bp | TTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCTACGATGCCATGCACCTaGCACTGGCCATTAGATGCC | + |
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Preference number: 4 (lower is better) Translates to: LLLFLFYGISRGTVAVMSTMPCT*HWPLDA Trigger: GGCATCTAATGGCCAGTGGCAGGTGCATGGCATCGT...AGACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR CCA 90 bp | TACTTTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATCCTGGTGAAGACGGATaGCTTGCGGGGGTAGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: YFITISFLWHFQGDSGSNPGEDG*LAGVVA Trigger: TGCAACTACCCCCGCAAGCCATCCGTCTTCACCAGG...ATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAAAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR TCA 90 bp | TTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCTTCACTGGGCTGGCCAGTTTaGTTAAGGCAATGTCATAGC | + |
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Preference number: 4 (lower is better) Translates to: LLFLFYGISRGTVAVMSSLGWPV*LRQCHS Trigger: GCTATGACATTGCCTTAATCAAACTGGCCAGCCCAG...TGAAGACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR GCA 90 bp | TTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCTAAGCTCACGATGCCATaGACCTGCCACTGGCCATTA | + |
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Preference number: 4 (lower is better) Translates to: LLLFLFYGISRGTVAVMSKLTMP*TCHWPL Trigger: TAATGGCCAGTGGCAGGTGCATGGCATCGTGAGCTT...AGACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR TCA 90 bp | TTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCTACAAGCTTAGAGACTTaGACAGCAGCAGAGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LLLFLFYGISRGTVAVMSTSLET*TAAEPA Trigger: AGCTGGCTCTGCTGCTGTTCAAGTCTCTAAGCTTGT...AGACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS GCA 90 bp | GACTTGAACAGCAGCAGAGCCAGCTCCGGGGTTGGAGAGGCTGTGTaGGCCCAGCAGCACTCGGTAGGTCTGATAGTTGCTGAGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: DLNSSRASSGVGEAV*AQQHSVGLIVAEAM Trigger: CATTGCCTCAGCAACTATCAGACCTACCGAGTGCTGCTGGGCGCACACAGCCTCTCCAACCCCGGAGCTGGCTCTGCTGCTGTTCAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR CAA 90 bp | ATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCTTCGAGCCAGCTCCGGGGTaGGAGAGGCTGTGTGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: ITISFLWHFQGDSGSNVFEPAPG*ERLCAP Trigger: GGGCGCACACAGCCTCTCCAACCCCGGAGCTGGCTC...GAAGACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR CAA 90 bp | ATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCTTCAGGGAGCCTCCGCAGTaGTGGCGCCACCTTCCGGAG | + |
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Preference number: 5 (lower is better) Translates to: ITISFLWHFQGDSGSNVFREPPQ*WRHLPE Trigger: CTCCGGAAGGTGGCGCCACAACTGCGGAGGCTCCCT...GAAGACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR CAA 90 bp | TTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCTTCAGCTGTCTGGATGTTCTaGCTCAGGGTCACTGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LLFLFYGISRGTVAVMSSAVWMF*LRVTGL Trigger: CAGCCCAGTGACCCTGAGCAAGAACATCCAGACAGC...TGAAGACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR CAA 90 bp | ACTTTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCAGGACTGTTCCCATaGGTCTGCAGCAGGCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: TLLLFLFYGISRGTVAVMSGLFP*VCSRPQ Trigger: CTGGGGCCTGCTGCAGACCAATGGGAACAGTCCTGA...CATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR CAA 90 bp | TACTTTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTTGGGTGTGGCCTCTaGACCCCCAACTACCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: YFITISFLWHFQGDSGSNVGCGL*TPNYPA Trigger: AGCAGGGTAGTTGGGGGTCAAGAGGCCACACCCAAC...ATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAAAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS-3UTR CAA 90 bp | TTATTACTATTTCTTTTCTATGGCATTTCCAGGGGGACAGTGGCAGTAATGTCTCACAAGCTTAGAGACTaGAACAGCAGCAGAGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LLLFLFYGISRGTVAVMSHKLRD*NSSRAS Trigger: GCTGGCTCTGCTGCTGTTCAAGTCTCTAAGCTTGTG...AGACATTACTGCCACTGTCCCCCTGGAAATGCCATAGAAAAGAAATAGTAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS CAA 72 bp | GATGCCCGGCAATTCAGTGGTCCGCCAGAGTCCCCATaGCAGCTGGAGGTCACGCCGTCGCCACCAGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: DARQFSGPPESP*QLEVTPSPPAH Trigger: GTGCGCTGGTGGCGACGGCGTGACCTCCAGCTGCAATGGGGACTCTGGCGGACCACTGAATTGCCGGGCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS CCA 72 bp | GGCAATTCAGTGGTCCGCCAGAGTCCCCATTGCAGCTaGAGGTCACGCCGTCGCCACCAGCGCACACCATGC | + |
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Preference number: 6 (lower is better) Translates to: GNSVVRQSPHCS*RSRRRHQRTPC Trigger: GCATGGTGTGCGCTGGTGGCGACGGCGTGACCTCCAGCTGCAATGGGGACTCTGGCGGACCACTGAATTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS CAA 72 bp | AGAACCCAGTTGTTGGCCACCAGGGAGCCTCCGCAGTaGTGGCGCCACCTTCCGGAGGAAAGGACCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RTQLLATREPPQ*WRHLPEERTCR Trigger: CCTGCAGGTCCTTTCCTCCGGAAGGTGGCGCCACAACTGCGGAGGCTCCCTGGTGGCCAACAACTGGGTTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS GCA 72 bp | AGCAGCAGAGCCAGCTCCGGGGTTGGAGAGGCTGTGTaGGCCCAGCAGCACTCGGTAGGTCTGATAGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: SSRASSGVGEAV*AQQHSVGLIVA Trigger: AGCAACTATCAGACCTACCGAGTGCTGCTGGGCGCACACAGCCTCTCCAACCCCGGAGCTGGCTCTGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS CCA 72 bp | CACCTGCCACTGGCCATTAGATGCCCGGCAATTCAGTaGTCCGCCAGAGTCCCCATTGCAGCTGGAGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: HLPLAIRCPAIQ*SARVPIAAGGH Trigger: GTGACCTCCAGCTGCAATGGGGACTCTGGCGGACCACTGAATTGCCGGGCATCTAATGGCCAGTGGCAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS GCA 72 bp | TTGCAGCCCAGAGAGGAGCCGAAGCTCACGATGCCATaGACCTGCCACTGGCCATTAGATGCCCGGCAATTC | + |
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Preference number: 6 (lower is better) Translates to: LQPREEPKLTMP*TCHWPLDARQF Trigger: GAATTGCCGGGCATCTAATGGCCAGTGGCAGGTGCATGGCATCGTGAGCTTCGGCTCCTCTCTGGGCTGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS TCA 72 bp | CATCATCCTCCACCTCATAAGTGGGGTACCCACAGCTaGGGGCTCCAGCCACCAAGGCAGATAGCAGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: HHPPPHKWGTHS*GLQPPRQIAAV Trigger: CACTGCTGCTATCTGCCTTGGTGGCTGGAGCCCTCAGCTGTGGGTACCCCACTTATGAGGTGGAGGATGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS CAA 72 bp | GTGCCAGCGGGTGGGAGGCAAGCTGTCTGGATGTTCTaGCTCAGGGTCACTGGGCTGGCCAGTTTGATTAAG | + |
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Preference number: 6 (lower is better) Translates to: VPAGGRQAVWMF*LRVTGLASLIK Trigger: CTTAATCAAACTGGCCAGCCCAGTGACCCTGAGCAAGAACATCCAGACAGCTTGCCTCCCACCCGCTGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS TCA 72 bp | GACTGTTCCCATTGGTCTGCAGCAGGCCCCAGCCTGTaGCATAGCAGACATAGTTTCTCGGGAGAATGGTGC | + |
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Preference number: 6 (lower is better) Translates to: DCSHWSAAGPSL*HSRHSFSGEWC Trigger: GCACCATTCTCCCGAGAAACTATGTCTGCTATGTCACAGGCTGGGGCCTGCTGCAGACCAATGGGAACAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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| CDS TCA 72 bp | GGATGTTCTTGCTCAGGGTCACTGGGCTGGCCAGTTTaGTTAAGGCAATGTCATAGCCATTGCCGACGTTTT | + |
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Preference number: 6 (lower is better) Translates to: GCSCSGSLGWPV*LRQCHSHCRRF Trigger: AAAACGTCGGCAATGGCTATGACATTGCCTTAATCAAACTGGCCAGCCCAGTGACCCTGAGCAAGAACATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102481.4 |
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