Pregenerated sensors for CELA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023031Ensembl transcript IDs: ENSMUST00000023775.9, ENSMUST00000229869.2, ENSMUST00000230312.2, ENSMUST00000230572.2, ENSMUST00000230740.2, ENSMUST00000230744.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTGCCCCAGATACCAAGACACCAGCAGCATTCCCCTGCTCCTGTTaGAGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTAGACAA | + |
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Preference number: 1 (lower is better) Translates to: FAPDTKTPAAFPCSC*SIRDGAQGCAHIRQ Trigger: TTGTCTAATATGTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAATGCTGCTGGTGTCTTGGTATCTGGGGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| 3UTR GCA 90 bp | AGCTCCTTTACTTCCTGTAGTTCTTTGGTTTCACAAAAATCCCTTTaGTCCTTCTGTCCTGCTGTGACCCGCGCAGGCCTGGGGCTAACT | + |
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Preference number: 1 (lower is better) Translates to: SSFTSCSSLVSQKSL*SFCPAVTRAGLGLT Trigger: AGTTAGCCCCAGGCCTGCGCGGGTCACAGCAGGACAGAAGGAGCAAAGGGATTTTTGTGAAACCAAAGAACTACAGGAAGTAAAGGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCATTCCCCTGCTCCTGTTGCAGTATTAGGGATGGAGCCCAAGGCTGTGCACTACTTCAGGTCTCATTaGAAAGCTAAGAGCCATCTT | + |
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Preference number: 2 (lower is better) Translates to: QHSPAPVAVLGMEPKAVHYFRSH*KAKSHL Trigger: AAGATGGCTCTTAGCTTTGCAATGAGACCTGAAGTA...GTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| 3UTR-3UTR GCA 90 bp | GGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCACTGAGCGATACTTCAGGTCTCATTaGAAAGCTAAGAGCCATCTT | + |
|
Preference number: 2 (lower is better) Translates to: GMEPKAVHILDKCSATERYFRSH*KAKSHL Trigger: AAGATGGCTCTTAGCTTTGCAATGAGACCTGAAGTA...TCGCTCAGTGGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| 3UTR-3UTR CAA 90 bp | GGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCACTGAGCGAAAGCTAAGAGCCATCTaGGGGAGGCCACTGGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: GMEPKAVHILDKCSATERKLRAI*GRPLDS Trigger: GGAGTCCAGTGGCCTCCCCAAGATGGCTCTTAGCTT...TCGCTCAGTGGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCCCTGCTCCTGTTGCAGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTAAGCTAAGAGCCATCTaGGGGAGGCCACTGGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: FPCSCCSIRDGAQGCAHIKLRAI*GRPLDS Trigger: GGAGTCCAGTGGCCTCCCCAAGATGGCTCTTAGCTT...AATATGTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| 3UTR-3UTR CAA 90 bp | AGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCACAAGCTAAGAGCCATCTaGGGGAGGCCACTGGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: SIRDGAQGCAHIRQVLGHKLRAI*GRPLDS Trigger: GGAGTCCAGTGGCCTCCCCAAGATGGCTCTTAGCTT...GTGGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCCTAATACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| 3UTR GCA 72 bp | GATACCAAGACACCAGCAGCATTCCCCTGCTCCTGTTaGAGTATTAGGGATGGAGCCCAAGGCTGTGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: DTKTPAAFPCSC*SIRDGAQGCAH Trigger: ATGTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAATGCTGCTGGTGTCTTGGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| 3UTR GCA 72 bp | TTTGGTTTCACAAAAATCCCTTTGCTCCTTCTGTCCTaGTGTGACCCGCGCAGGCCTGGGGCTAACTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FGFTKIPLLLLS*CDPRRPGANFS Trigger: AGAGAAGTTAGCCCCAGGCCTGCGCGGGTCACAGCAGGACAGAAGGAGCAAAGGGATTTTTGTGAAACCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCATTCCCCTGCTCCTGTTGCAGTATTAGGGATGGAGCCCAAGGCTGTGCACAGCTCTAACTCCTTCTaGCTTACTTCAGGTCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: QHSPAPVAVLGMEPKAVHSSNSF*LTSGLI Trigger: AATGAGACCTGAAGTAAGCAAGAAGGAGTTAGAGCT...GTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| 3UTR GCA 72 bp | ACTTCCTGTAGTTCTTTGGTTTCACAAAAATCCCTTTaGTCCTTCTGTCCTGCTGTGACCCGCGCAGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSCSSLVSQKSL*SFCPAVTRAGL Trigger: CAGGCCTGCGCGGGTCACAGCAGGACAGAAGGAGCAAAGGGATTTTTGTGAAACCAAAGAACTACAGGAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| 3UTR-3UTR CAA 90 bp | AGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCACAGCTCTAACTCCTTCTaGCTTACTTCAGGTCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: SIRDGAQGCAHIRQVLGHSSNSF*LTSGLI Trigger: AATGAGACCTGAAGTAAGCAAGAAGGAGTTAGAGCT...GTGGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCCTAATACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR GCA 90 bp | ACCCGCGCAGGCCTGGGGCTAACTTCTCTTCCTCTTCCACAACGCTGGGATCTTCTGGGCAGGTATGCCTaGTGCAGGGTCTGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TRAGLGLTSLPLPQRWDLLGRYA*CRVWAS Trigger: GCTGGCCCAGACCCTGCAGCAGGCATACCTGCCCAG...AAGATCCCAGCGTTGTGGAAGAGGAAGAGAAGTTAGCCCCAGGCCTGCGCGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| CDS-3UTR CCA 90 bp | TCCTGCTGTGACCCGCGCAGGCCTGGGGCTAACTTCTCTTCCTCTTCCACAACGGCCTGCTGCAGGGTCTaGGCCAGCTCCCCATTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SCCDPRRPGANFSSSSTTACCRV*ASSPLV Trigger: AACCAATGGGGAGCTGGCCCAGACCCTGCAGCAGGC...CGTTGTGGAAGAGGAAGAGAAGTTAGCCCCAGGCCTGCGCGGGTCACAGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| CDS-3UTR CCA 90 bp | TGTGACCCGCGCAGGCCTGGGGCTAACTTCTCTTCCTCTTCCACAACGCTGGGAGGGCCAGCTCCCCATTaGTTCTGGTTCTTCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CDPRRPGANFSSSSTTLGGPAPH*FWFFPS Trigger: GCTGGGGAAGAACCAGAACCAATGGGGAGCTGGCCC...TCCCAGCGTTGTGGAAGAGGAAGAGAAGTTAGCCCCAGGCCTGCGCGGGTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| CDS-3UTR CCA 90 bp | GGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCACTGAGCGAGCCTGCTGCAGGGTCTaGGCCAGCTCCCCATTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GMEPKAVHILDKCSATERACCRV*ASSPLV Trigger: AACCAATGGGGAGCTGGCCCAGACCCTGCAGCAGGC...TCGCTCAGTGGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS-3UTR TCA 90 bp | CAGCATTCCCCTGCTCCTGTTGCAGTATTAGGGATGGAGCCCAAGGCTGTGCACCCCAGTTGCTTCGGATaGGGGTGCCTCCACAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QHSPAPVAVLGMEPKAVHPSCFG*GCLHRC Trigger: ACACCTGTGGAGGCACCCTCATCCGAAGCAACTGGG...GTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAATGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS-3UTR GCA 90 bp | GCAGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCCTGGGCAGGTATGCCTaGTGCAGGGTCTGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVLGMEPKAVHILDKCSALGRYA*CRVWAS Trigger: GCTGGCCCAGACCCTGCAGCAGGCATACCTGCCCAG...GGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCCTAATACTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS-3UTR CCA 90 bp | GGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCACTGAGCGAGGGCCAGCTCCCCATTaGTTCTGGTTCTTCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GMEPKAVHILDKCSATERGPAPH*FWFFPS Trigger: GCTGGGGAAGAACCAGAACCAATGGGGAGCTGGCCC...TCGCTCAGTGGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS-3UTR GCA 90 bp | TGCTGTGACCCGCGCAGGCCTGGGGCTAACTTCTCTTCCTCTTCCACAACGCTGTCACATACTGCTCGGTaGCGTCATTCTGGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CCDPRRPGANFSSSSTTLSHTAR*RHSGSG Trigger: ACCTGAGCCAGAATGACGGCACCGAGCAGTATGTGA...CAGCGTTGTGGAAGAGGAAGAGAAGTTAGCCCCAGGCCTGCGCGGGTCACAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| CDS-3UTR CCA 90 bp | GGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCACTGAGCGAAGACGGTGGGCTTCCTaGCGACATTACAGCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GMEPKAVHILDKCSATERRRWAS*RHYSPC Trigger: GCATGGGCTGTAATGTCGCCAGGAAGCCCACCGTCT...TCGCTCAGTGGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR GCA 90 bp | CAGCATTCCCCTGCTCCTGTTGCAGTATTAGGGATGGAGCCCAAGGCTGTGCACCCTCCACAGGTGTGGTaGCATGATCCTCCATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QHSPAPVAVLGMEPKAVHPPQVW*HDPPYW Trigger: CCAGTATGGAGGATCATGGCACCACACCTGTGGAGG...GTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAATGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS-3UTR CCA 90 bp | CAGCATTCCCCTGCTCCTGTTGCAGTATTAGGGATGGAGCCCAAGGCTGTGCACTGCTGGACACAAAGCTaGTCACTCCGTGGACAGCAT | + |
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Preference number: 4 (lower is better) Translates to: QHSPAPVAVLGMEPKAVHCWTQS*SLRGQH Trigger: ATGCTGTCCACGGAGTGACCAGCTTTGTGTCCAGCA...GTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR CCA 90 bp | GGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCACTGAGCGATGCTGGACACAAAGCTaGTCACTCCGTGGACAGCAT | + |
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Preference number: 4 (lower is better) Translates to: GMEPKAVHILDKCSATERCWTQS*SLRGQH Trigger: ATGCTGTCCACGGAGTGACCAGCTTTGTGTCCAGCA...TCGCTCAGTGGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR TCA 90 bp | CAGCATTCCCCTGCTCCTGTTGCAGTATTAGGGATGGAGCCCAAGGCTGTGCACGTTCCAGTAGGGGTGTaGCACAATCTTCTGCACGTT | + |
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Preference number: 4 (lower is better) Translates to: QHSPAPVAVLGMEPKAVHVPVGV*HNLLHV Trigger: AACGTGCAGAAGATTGTGTCACACCCCTACTGGAAC...GTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS-3UTR GCA 90 bp | CAGCATTCCCCTGCTCCTGTTGCAGTATTAGGGATGGAGCCCAAGGCTGTGCACCGACATTACAGCCCATaGTGGACACAAAGCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: QHSPAPVAVLGMEPKAVHRHYSP*WTQSWS Trigger: TGACCAGCTTTGTGTCCAGCATGGGCTGTAATGTCG...GTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR GCA 90 bp | GGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCACTGAGCGACGACATTACAGCCCATaGTGGACACAAAGCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: GMEPKAVHILDKCSATERRHYSP*WTQSWS Trigger: TGACCAGCTTTGTGTCCAGCATGGGCTGTAATGTCG...TCGCTCAGTGGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR CCA 90 bp | GGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCACTGAGCGACATTACAGCCCATGCTaGACACAAAGCTGGTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GMEPKAVHILDKCSATERHYSPC*TQSWSL Trigger: GAGTGACCAGCTTTGTGTCCAGCATGGGCTGTAATG...TCGCTCAGTGGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR CCA 90 bp | GCTTACTTCAGGTCTCATTGCAAAGCTAAGAGCCATCTTGGGGAGGCCACTGGAAGACGGTGGGCTTCCTaGCGACATTACAGCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: AYFRSHCKAKSHLGEATGRRWAS*RHYSPC Trigger: GCATGGGCTGTAATGTCGCCAGGAAGCCCACCGTCT...TCCAGTGGCCTCCCCAAGATGGCTCTTAGCTTTGCAATGAGACCTGAAGTAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR CCA 90 bp | TTCCCCTGCTCCTGTTGCAGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTAGACGGTGGGCTTCCTaGCGACATTACAGCCCATGC | + |
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Preference number: 4 (lower is better) Translates to: FPCSCCSIRDGAQGCAHIRRWAS*RHYSPC Trigger: GCATGGGCTGTAATGTCGCCAGGAAGCCCACCGTCT...AATATGTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR TCA 90 bp | GTTTCACAAAAATCCCTTTGCTCCTTCTGTCCTGCTGTGACCCGCGCAGGCCTGGTTCCAGTAGGGGTGTaGCACAATCTTCTGCACGTT | + |
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Preference number: 4 (lower is better) Translates to: VSQKSLCSFCPAVTRAGLVPVGV*HNLLHV Trigger: AACGTGCAGAAGATTGTGTCACACCCCTACTGGAAC...CAGGCCTGCGCGGGTCACAGCAGGACAGAAGGAGCAAAGGGATTTTTGTGAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| CDS-3UTR GCA 90 bp | TTAGGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCACTGAGTCACATACTGCTCGGTaGCGTCATTCTGGCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LGMEPKAVHILDKCSATESHTAR*RHSGSG Trigger: ACCTGAGCCAGAATGACGGCACCGAGCAGTATGTGA...CTCAGTGGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS-3UTR CCA 90 bp | TTCCCCTGCTCCTGTTGCAGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTTGCTATAGGACACGCTaGGCAGGTATGCCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FPCSCCSIRDGAQGCAHICYRTR*AGMPAA Trigger: TGCAGCAGGCATACCTGCCCAGCGTGTCCTATAGCA...AATATGTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS-3UTR CCA 90 bp | TTAGGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCACTGAGCACCAGCGCACACCATaGTATTCTTCACAGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LGMEPKAVHILDKCSATEHQRTP*YSSQRS Trigger: GCTCCTCTGTGAAGAATACCATGGTGTGCGCTGGTG...CTCAGTGGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS-3UTR CCA 90 bp | TCCTTCTTGCTTACTTCAGGTCTCATTGCAAAGCTAAGAGCCATCTTGGGGAGGCCCCCAGAATCACCCTaGCATCCAGAGCGGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: SFLLTSGLIAKLRAILGRPPESP*HPERTP Trigger: TGGAGTCCGCTCTGGATGCCAGGGTGATTCTGGGGG...CCTCCCCAAGATGGCTCTTAGCTTTGCAATGAGACCTGAAGTAAGCAAGAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023775.9 ENSMUST00000230572.2 ENSMUST00000230740.2 |
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| CDS-3UTR CCA 90 bp | GCAGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCTGCTGGACACAAAGCTaGTCACTCCGTGGACAGCAT | + |
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Preference number: 4 (lower is better) Translates to: AVLGMEPKAVHILDKCSACWTQS*SLRGQH Trigger: ATGCTGTCCACGGAGTGACCAGCTTTGTGTCCAGCA...GGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCCTAATACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR GCA 90 bp | TCTAACTCCTTCTTGCTTACTTCAGGTCTCATTGCAAAGCTAAGAGCCATCTTGCACGCTGGGCAGGTATaGCTGCTGCAGGGTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SNSFLLTSGLIAKLRAILHAGQV*LLQGLG Trigger: GCCCAGACCCTGCAGCAGGCATACCTGCCCAGCGTG...CAAGATGGCTCTTAGCTTTGCAATGAGACCTGAAGTAAGCAAGAAGGAGTTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS-3UTR GCA 90 bp | GCAAAAGCAGCAGCTCCTTTACTTCCTGTAGTTCTTTGGTTTCACAAAAATCCCCACGCTGGGCAGGTATaGCTGCTGCAGGGTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: AKAAAPLLPVVLWFHKNPHAGQV*LLQGLG Trigger: GCCCAGACCCTGCAGCAGGCATACCTGCCCAGCGTG...GGGATTTTTGTGAAACCAAAGAACTACAGGAAGTAAAGGAGCTGCTGCTTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| CDS-3UTR CCA 90 bp | TTCCCCTGCTCCTGTTGCAGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTTGCTGGACACAAAGCTaGTCACTCCGTGGACAGCAT | + |
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Preference number: 4 (lower is better) Translates to: FPCSCCSIRDGAQGCAHICWTQS*SLRGQH Trigger: ATGCTGTCCACGGAGTGACCAGCTTTGTGTCCAGCA...AATATGTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR CCA 90 bp | AGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCACTGCTGGACACAAAGCTaGTCACTCCGTGGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SIRDGAQGCAHIRQVLGHCWTQS*SLRGQH Trigger: ATGCTGTCCACGGAGTGACCAGCTTTGTGTCCAGCA...GTGGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCCTAATACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR CCA 90 bp | TTAGGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCACTGAGCATTACAGCCCATGCTaGACACAAAGCTGGTCACTC | + |
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Preference number: 4 (lower is better) Translates to: LGMEPKAVHILDKCSATEHYSPC*TQSWSL Trigger: GAGTGACCAGCTTTGTGTCCAGCATGGGCTGTAATG...CTCAGTGGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR GCA 90 bp | TTCCCCTGCTCCTGTTGCAGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTCGACATTACAGCCCATaGTGGACACAAAGCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: FPCSCCSIRDGAQGCAHIRHYSP*WTQSWS Trigger: TGACCAGCTTTGTGTCCAGCATGGGCTGTAATGTCG...AATATGTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR CCA 90 bp | TTCCCCTGCTCCTGTTGCAGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTCCCAGTAAGAGGAGCTaGAGCAGATGCTATAGGACA | + |
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Preference number: 4 (lower is better) Translates to: FPCSCCSIRDGAQGCAHIPSKRS*SRCYRT Trigger: TGTCCTATAGCATCTGCTCCAGCTCCTCTTACTGGG...AATATGTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS-3UTR CCA 90 bp | TTCCCCTGCTCCTGTTGCAGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTCATTACAGCCCATGCTaGACACAAAGCTGGTCACTC | + |
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Preference number: 4 (lower is better) Translates to: FPCSCCSIRDGAQGCAHIHYSPC*TQSWSL Trigger: GAGTGACCAGCTTTGTGTCCAGCATGGGCTGTAATG...AATATGTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR CCA 90 bp | GCTTACTTCAGGTCTCATTGCAAAGCTAAGAGCCATCTTGGGGAGGCCACTGGACATTACAGCCCATGCTaGACACAAAGCTGGTCACTC | + |
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Preference number: 4 (lower is better) Translates to: AYFRSHCKAKSHLGEATGHYSPC*TQSWSL Trigger: GAGTGACCAGCTTTGTGTCCAGCATGGGCTGTAATG...TCCAGTGGCCTCCCCAAGATGGCTCTTAGCTTTGCAATGAGACCTGAAGTAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR GCA 90 bp | GCAGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCTGTGACACAATCTTCTaGACGTTCACATACTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: AVLGMEPKAVHILDKCSACDTIF*TFTYCS Trigger: CGAGCAGTATGTGAACGTGCAGAAGATTGTGTCACA...GGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCCTAATACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS-3UTR CCA 90 bp | TCTAACTCCTTCTTGCTTACTTCAGGTCTCATTGCAAAGCTAAGAGCCATCTTGCCCCCAGAATCACCCTaGCATCCAGAGCGGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: SNSFLLTSGLIAKLRAILPPESP*HPERTP Trigger: TGGAGTCCGCTCTGGATGCCAGGGTGATTCTGGGGG...CAAGATGGCTCTTAGCTTTGCAATGAGACCTGAAGTAAGCAAGAAGGAGTTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023775.9 ENSMUST00000230572.2 ENSMUST00000230740.2 |
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| 3UTR CAA 72 bp | CGGCCACTGAGCGATAACCTCAGCTCTAACTCCTTCTaGCTTACTTCAGGTCTCATTGCAAAGCTAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RPLSDNLSSNSF*LTSGLIAKLRA Trigger: GGCTCTTAGCTTTGCAATGAGACCTGAAGTAAGCAAGAAGGAGTTAGAGCTGAGGTTATCGCTCAGTGGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR GCA 90 bp | GATAACCTCAGCTCTAACTCCTTCTTGCTTACTTCAGGTCTCATTGCAAAGCTATTCTGGCTCAGGTTGTaGTCTCCGACAACCACTCGA | + |
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Preference number: 4 (lower is better) Translates to: DNLSSNSFLLTSGLIAKLFWLRL*SPTTTR Trigger: TCGAGTGGTTGTCGGAGAGCACAACCTGAGCCAGAA...TAGCTTTGCAATGAGACCTGAAGTAAGCAAGAAGGAGTTAGAGCTGAGGTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS-3UTR GCA 90 bp | GATAACCTCAGCTCTAACTCCTTCTTGCTTACTTCAGGTCTCATTGCAAAGCTACGACATTACAGCCCATaGTGGACACAAAGCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: DNLSSNSFLLTSGLIAKLRHYSP*WTQSWS Trigger: TGACCAGCTTTGTGTCCAGCATGGGCTGTAATGTCG...TAGCTTTGCAATGAGACCTGAAGTAAGCAAGAAGGAGTTAGAGCTGAGGTTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR CCA 90 bp | GCAAAAGCAGCAGCTCCTTTACTTCCTGTAGTTCTTTGGTTTCACAAAAATCCCCCCAGTAAGAGGAGCTaGAGCAGATGCTATAGGACA | + |
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Preference number: 4 (lower is better) Translates to: AKAAAPLLPVVLWFHKNPPSKRS*SRCYRT Trigger: TGTCCTATAGCATCTGCTCCAGCTCCTCTTACTGGG...GGGATTTTTGTGAAACCAAAGAACTACAGGAAGTAAAGGAGCTGCTGCTTTTGC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| CDS-3UTR CCA 90 bp | GATAACCTCAGCTCTAACTCCTTCTTGCTTACTTCAGGTCTCATTGCAAAGCTACATTACAGCCCATGCTaGACACAAAGCTGGTCACTC | + |
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Preference number: 4 (lower is better) Translates to: DNLSSNSFLLTSGLIAKLHYSPC*TQSWSL Trigger: GAGTGACCAGCTTTGTGTCCAGCATGGGCTGTAATG...TAGCTTTGCAATGAGACCTGAAGTAAGCAAGAAGGAGTTAGAGCTGAGGTTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS-3UTR GCA 90 bp | TTTACTTCCTGTAGTTCTTTGGTTTCACAAAAATCCCTTTGCTCCTTCTGTCCTTTCTGGCTCAGGTTGTaGTCTCCGACAACCACTCGA | + |
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Preference number: 4 (lower is better) Translates to: FTSCSSLVSQKSLCSFCPFWLRL*SPTTTR Trigger: TCGAGTGGTTGTCGGAGAGCACAACCTGAGCCAGAA...AGGACAGAAGGAGCAAAGGGATTTTTGTGAAACCAAAGAACTACAGGAAGTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| CDS-3UTR CCA 90 bp | TTTACTTCCTGTAGTTCTTTGGTTTCACAAAAATCCCTTTGCTCCTTCTGTCCTCACCAGCGCACACCATaGTATTCTTCACAGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: FTSCSSLVSQKSLCSFCPHQRTP*YSSQRS Trigger: GCTCCTCTGTGAAGAATACCATGGTGTGCGCTGGTG...AGGACAGAAGGAGCAAAGGGATTTTTGTGAAACCAAAGAACTACAGGAAGTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| CDS-3UTR GCA 90 bp | ACTTCCTGTAGTTCTTTGGTTTCACAAAAATCCCTTTGCTCCTTCTGTCCTGCTTGTGACACAATCTTCTaGACGTTCACATACTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: TSCSSLVSQKSLCSFCPACDTIF*TFTYCS Trigger: CGAGCAGTATGTGAACGTGCAGAAGATTGTGTCACA...AGCAGGACAGAAGGAGCAAAGGGATTTTTGTGAAACCAAAGAACTACAGGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| 3UTR CAA 72 bp | TGCAAAAGCAGCAGCTCCTTTACTTCCTGTAGTTCTTaGGTTTCACAAAAATCCCTTTGCTCCTTCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: CKSSSSFTSCSS*VSQKSLCSFCP Trigger: AGGACAGAAGGAGCAAAGGGATTTTTGTGAAACCAAAGAACTACAGGAAGTAAAGGAGCTGCTGCTTTTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| CDS CCA 90 bp | AGGAGCCCCAGTAAGAGGAGCTGGAGCAGATGCTATAGGACACGCTaGGCAGGTATGCCTGCTGCAGGGTCTGGGCCAGCTCCCCATTGG | + |
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Preference number: 5 (lower is better) Translates to: RSPSKRSWSRCYRTR*AGMPAAGSGPAPHW Trigger: CCAATGGGGAGCTGGCCCAGACCCTGCAGCAGGCATACCTGCCCAGCGTGTCCTATAGCATCTGCTCCAGCTCCTCTTACTGGGGCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023775.9 ENSMUST00000230312.2 |
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| CDS-3UTR CAA 90 bp | TGTGACCCGCGCAGGCCTGGGGCTAACTTCTCTTCCTCTTCCACAACGCTGGGATTGAGTGTAACACTCTaGGCCAAGCGCAGCAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: CDPRRPGANFSSSSTTLGLSVTL*AKRSRA Trigger: CGCCCTGCTGCGCTTGGCCAAGAGTGTTACACTCAA...TCCCAGCGTTGTGGAAGAGGAAGAGAAGTTAGCCCCAGGCCTGCGCGGGTCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| CDS TCA 90 bp | CAGGTGTGGTGCCATGATCCTCCATACTGGTACTGGAGGGAAATCTaGGACGGCCAAGAGTTCCTCCGGGCTTCAGCCCCTCCAACCACG | + |
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Preference number: 5 (lower is better) Translates to: QVWCHDPPYWYWREI*DGQEFLRASAPPTT Trigger: CGTGGTTGGAGGGGCTGAAGCCCGGAGGAACTCTTGGCCGTCTCAGATTTCCCTCCAGTACCAGTATGGAGGATCATGGCACCACACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS GCA 90 bp | ACACAAAGCTGGTCACTCCGTGGACAGCATACTGACCGTTCACCATaGAGTGGAGGGGTCCCCCAGAATCACCCTGGCATCCAGAGCGGA | + |
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Preference number: 5 (lower is better) Translates to: TQSWSLRGQHTDRSP*SGGVPQNHPGIQSG Trigger: TCCGCTCTGGATGCCAGGGTGATTCTGGGGGACCCCTCCACTGCATGGTGAACGGTCAGTATGCTGTCCACGGAGTGACCAGCTTTGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023775.9 ENSMUST00000230572.2 ENSMUST00000230740.2 |
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| CDS-3UTR CAA 90 bp | GTGACCCGCGCAGGCCTGGGGCTAACTTCTCTTCCTCTTCCACAACGCTGGGATTCATTCTGGCTCAGGTaGTGCTCTCCGACAACCACT | + |
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Preference number: 5 (lower is better) Translates to: VTRAGLGLTSLPLPQRWDSFWLR*CSPTTT Trigger: AGTGGTTGTCGGAGAGCACAACCTGAGCCAGAATGA...ATCCCAGCGTTGTGGAAGAGGAAGAGAAGTTAGCCCCAGGCCTGCGCGGGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230312.2 |
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| CDS-3UTR CAA 90 bp | GCAGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCGCGGTCATCACCCAGTaGCTTCGGATGAGGGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: AVLGMEPKAVHILDKCSAAVITQ*LRMRVP Trigger: AGGCACCCTCATCCGAAGCAACTGGGTGATGACCGC...GGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCCTAATACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS-3UTR CAA 90 bp | TTAGGGATGGAGCCCAAGGCTGTGCACATATTAGACAAGTGCTCGGCCACTGAGTTGAGTGTAACACTCTaGGCCAAGCGCAGCAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: LGMEPKAVHILDKCSATELSVTL*AKRSRA Trigger: CGCCCTGCTGCGCTTGGCCAAGAGTGTTACACTCAA...CTCAGTGGCCGAGCACTTGTCTAATATGTGCACAGCCTTGGGCTCCATCCCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS GCA 90 bp | AGTAGGGGTGTGACACAATCTTCTGCACGTTCACATACTGCTCGGTaGCGTCATTCTGGCTCAGGTTGTGCTCTCCGACAACCACTCGAT | + |
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Preference number: 5 (lower is better) Translates to: SRGVTQSSARSHTAR*RHSGSGCALRQPLD Trigger: ATCGAGTGGTTGTCGGAGAGCACAACCTGAGCCAGAATGACGGCACCGAGCAGTATGTGAACGTGCAGAAGATTGTGTCACACCCCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023775.9 ENSMUST00000230312.2 |
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| CDS-3UTR CAA 90 bp | TTCCCCTGCTCCTGTTGCAGTATTAGGGATGGAGCCCAAGGCTGTGCACATATTTCATTCTGGCTCAGGTaGTGCTCTCCGACAACCACT | + |
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Preference number: 5 (lower is better) Translates to: FPCSCCSIRDGAQGCAHISFWLR*CSPTTT Trigger: AGTGGTTGTCGGAGAGCACAACCTGAGCCAGAATGA...AATATGTGCACAGCCTTGGGCTCCATCCCTAATACTGCAACAGGAGCAGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS TCA 90 bp | GATGTCATAGCCTGCAACCACGTTGTTCTTGTTCCAGTAGGGGTGTaGCACAATCTTCTGCACGTTCACATACTGCTCGGTGCCGTCATT | + |
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Preference number: 5 (lower is better) Translates to: DVIACNHVVLVPVGV*HNLLHVHILLGAVI Trigger: AATGACGGCACCGAGCAGTATGTGAACGTGCAGAAGATTGTGTCACACCCCTACTGGAACAAGAACAACGTGGTTGCAGGCTATGACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023775.9 ENSMUST00000230312.2 |
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| CDS CCA 72 bp | TTCACCATGCAGTGGAGGGGTCCCCCAGAATCACCCTaGCATCCAGAGCGGACTCCATCTCCACCAGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: FTMQWRGPPESP*HPERTPSPPAH Trigger: GTGCGCTGGTGGAGATGGAGTCCGCTCTGGATGCCAGGGTGATTCTGGGGGACCCCTCCACTGCATGGTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023775.9 ENSMUST00000230572.2 ENSMUST00000230740.2 |
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| CDS GCA 72 bp | TGGTCACTCCGTGGACAGCATACTGACCGTTCACCATaGAGTGGAGGGGTCCCCCAGAATCACCCTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: WSLRGQHTDRSP*SGGVPQNHPGI Trigger: GATGCCAGGGTGATTCTGGGGGACCCCTCCACTGCATGGTGAACGGTCAGTATGCTGTCCACGGAGTGACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023775.9 ENSMUST00000230572.2 ENSMUST00000230740.2 |
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| CDS CCA 72 bp | AGTAAGAGGAGCTGGAGCAGATGCTATAGGACACGCTaGGCAGGTATGCCTGCTGCAGGGTCTGGGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SKRSWSRCYRTR*AGMPAAGSGPA Trigger: AGCTGGCCCAGACCCTGCAGCAGGCATACCTGCCCAGCGTGTCCTATAGCATCTGCTCCAGCTCCTCTTACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023775.9 ENSMUST00000230312.2 |
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| CDS TCA 72 bp | CTGGACACAAAGCTGGTCACTCCGTGGACAGCATACTaGCCGTTCACCATGCAGTGGAGGGGTCCCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LDTKLVTPWTAY*PFTMQWRGPPE Trigger: TTCTGGGGGACCCCTCCACTGCATGGTGAACGGTCAGTATGCTGTCCACGGAGTGACCAGCTTTGTGTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023775.9 ENSMUST00000230572.2 ENSMUST00000230740.2 |
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| CDS GCA 72 bp | TCACAGAGGAGCCCCAGTAAGAGGAGCTGGAGCAGATaGTATAGGACACGCTGGGCAGGTATGCCTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SQRSPSKRSWSR*YRTRWAGMPAA Trigger: TGCAGCAGGCATACCTGCCCAGCGTGTCCTATAGCATCTGCTCCAGCTCCTCTTACTGGGGCTCCTCTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023775.9 ENSMUST00000230312.2 |
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| CDS TCA 72 bp | TGCCATGATCCTCCATACTGGTACTGGAGGGAAATCTaGGACGGCCAAGAGTTCCTCCGGGCTTCAGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: CHDPPYWYWREI*DGQEFLRASAP Trigger: AGGGGCTGAAGCCCGGAGGAACTCTTGGCCGTCTCAGATTTCCCTCCAGTACCAGTATGGAGGATCATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS CCA 72 bp | ACCCAGTTGCTTCGGATGAGGGTGCCTCCACAGGTGTaGTGCCATGATCCTCCATACTGGTACTGGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: TQLLRMRVPPQV*CHDPPYWYWRE Trigger: TTCCCTCCAGTACCAGTATGGAGGATCATGGCACCACACCTGTGGAGGCACCCTCATCCGAAGCAACTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023775.9 |
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| CDS CCA 72 bp | TCAGGTTGTGCTCTCCGACAACCACTCGATAAGTCATaGGGCTGTCCACACAGTGAGCAGCGGTCATCACCC | + |
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Preference number: 6 (lower is better) Translates to: SGCALRQPLDKS*GCPHSEQRSSP Trigger: GGGTGATGACCGCTGCTCACTGTGTGGACAGCCCCATGACTTATCGAGTGGTTGTCGGAGAGCACAACCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023775.9 ENSMUST00000230312.2 |
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| CDS CCA 72 bp | TCCTGGCGACATTACAGCCCATGCTGGACACAAAGCTaGTCACTCCGTGGACAGCATACTGACCGTTCACCA | + |
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Preference number: 6 (lower is better) Translates to: SWRHYSPCWTQS*SLRGQHTDRSP Trigger: TGGTGAACGGTCAGTATGCTGTCCACGGAGTGACCAGCTTTGTGTCCAGCATGGGCTGTAATGTCGCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023775.9 ENSMUST00000229869.2 ENSMUST00000230572.2 ENSMUST00000230740.2 ENSMUST00000230744.2 |
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| CDS GCA 72 bp | GTGACACAATCTTCTGCACGTTCACATACTGCTCGGTaGCGTCATTCTGGCTCAGGTTGTGCTCTCCGACAA | + |
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Preference number: 6 (lower is better) Translates to: VTQSSARSHTAR*RHSGSGCALRQ Trigger: TTGTCGGAGAGCACAACCTGAGCCAGAATGACGGCACCGAGCAGTATGTGAACGTGCAGAAGATTGTGTCAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023775.9 ENSMUST00000230312.2 |
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| CDS TCA 72 bp | GCCTGCAACCACGTTGTTCTTGTTCCAGTAGGGGTGTaGCACAATCTTCTGCACGTTCACATACTGCTCGGT | + |
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Preference number: 6 (lower is better) Translates to: ACNHVVLVPVGV*HNLLHVHILLG Trigger: ACCGAGCAGTATGTGAACGTGCAGAAGATTGTGTCACACCCCTACTGGAACAAGAACAACGTGGTTGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023775.9 ENSMUST00000230312.2 |
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