Pregenerated sensors for CEL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026818Ensembl transcript IDs: ENSMUST00000028161.6
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCATGTAGGTGCTGGGAATTGAACACAGGACCTTTAGAAGAACAGTaGGTGATCTTAATTCCTGACCCATCTCTCCAGCCCCAGCTTATA | + |
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Preference number: 1 (lower is better) Translates to: PCRCWELNTGPLEEQ*VILIPDPSLQPQLI Trigger: TATAAGCTGGGGCTGGAGAGATGGGTCAGGAATTAAGATCACTCACTGTTCTTCTAAAGGTCCTGTGTTCAATTCCCAGCACCTACATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| 3UTR-3UTR GCA 90 bp | GAGGCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTAGTCTGCATGTACATCTaGACACCAGTAGATGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: EALLKESFIETEPWDQGLVCMYI*TPVDGV Trigger: GACTCCATCTACTGGTGTGCAGATGTACATGCAGAC...TAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| 3UTR-3UTR TCA 90 bp | GTATGTATTTTATGTATATGGGTACTTAGTCTGCATGTACATCTGCACACCAGTAGTGATCTTAATTCCTaGCCCATCTCTCCAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: VCILCIWVLSLHVHLHTSSDLNS*PISPAP Trigger: TGGGGCTGGAGAGATGGGTCAGGAATTAAGATCACT...ACTGGTGTGCAGATGTACATGCAGACTAAGTACCCATATACATAAAATACATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| 3UTR TCA 72 bp | TGCTGGGAATTGAACACAGGACCTTTAGAAGAACAGTaGGTGATCTTAATTCCTGACCCATCTCTCCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: CWELNTGPLEEQ*VILIPDPSLQP Trigger: GGGCTGGAGAGATGGGTCAGGAATTAAGATCACTCACTGTTCTTCTAAAGGTCCTGTGTTCAATTCCCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| 3UTR-3UTR CAA 90 bp | CAGATAGTGAGGGCTGAGGCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTGTAGGTGCTGGGAATaGAACACAGGACCTTTAGAA | + |
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Preference number: 3 (lower is better) Translates to: QIVRAEALLKESFIETEPCRCWE*NTGPLE Trigger: TTCTAAAGGTCCTGTGTTCAATTCCCAGCACCTACA...GGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGCCTCAGCCCTCACTATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | CAGATAGTGAGGGCTGAGGCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCACCTGCTTCCTGCCCTaGGGCACCCAGATATTGAGG | + |
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Preference number: 4 (lower is better) Translates to: QIVRAEALLKESFIETEPTCFLP*GTQILR Trigger: CCTCAATATCTGGGTGCCCCAGGGCAGGAAGCAGGT...GGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGCCTCAGCCCTCACTATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | GAGGCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTAGTGAGTTGCCCATGTTaGGGTCCCCACTCCTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: EALLKESFIETEPWDQGLVSCPC*GPHSWQ Trigger: TTGCCAGGAGTGGGGACCCCAACATGGGCAACTCAC...TAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR TCA 90 bp | CAGATAGTGAGGGCTGAGGCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCATGGTGGCAGGCATCTaGGCCTCCACAGAGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: QIVRAEALLKESFIETEPMVAGI*ASTESS Trigger: AGATGACTCTGTGGAGGCTCAGATGCCTGCCACCAT...GGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGCCTCAGCCCTCACTATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR GCA 90 bp | GCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGGGACACCTGCTTCCTaGCCTGGGGCACCCAGATAT | + |
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Preference number: 4 (lower is better) Translates to: ALLKESFIETEPWDQGLYGTPAS*PGAPRY Trigger: ATATCTGGGTGCCCCAGGGCAGGAAGCAGGTGTCCC...ATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | GCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGCATGGGCTTTGTGCTaGGCCAGCGCTATCTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: ALLKESFIETEPWDQGLYAWALC*ASAISV Trigger: CACGGAGATAGCGCTGGCCCAGCACAAAGCCCATGC...ATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR TCA 90 bp | AAGGAGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTAGGCCCGGGGATCTGTaGTCTTCAGACACGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: KESFIETEPWDQGLYDFIRPGDL*SSDTQP Trigger: TGGCTGCGTGTCTGAAGATCACAGATCCCCGGGCCT...AATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR GCA 90 bp | AGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTTATGTGCAGCACAAGCCGCTaGCAAGCAGCAGGTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RALLKQNPGTKAYMTLFMCSTSR*QAAGEA Trigger: GGCCTCACCTGCTGCTTGGCAGCGGCTTGTGCTGCA...CATAAATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR TCA 90 bp | GAGGCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTACAAAGGGGATGCCCTTaGAGATGTCAACAGAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: EALLKESFIETEPWDQGLQRGCP*RCQQSH Trigger: GTGACTCTGTTGACATCTTCAAGGGCATCCCCTTTG...TAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR TCA 90 bp | GCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTTATGTATCATCCTCAGGGGGAGTaGGGGTGTCCTGGTCACCAG | + |
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Preference number: 4 (lower is better) Translates to: ALLKQNPGTKAYMTLFMYHPQGE*GCPGHQ Trigger: CTGGTGACCAGGACACCCTCACTCCCCCTGAGGATG...ATACATAAATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR TCA 90 bp | GTATGTATTTTATGTATATGGGTACTTAGTCTGCATGTACATCTGCACACCAGTGTCAGGGGCAACCTCTaGGTCATCCTCAGGGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: VCILCIWVLSLHVHLHTSVRGNL*VILRGS Trigger: ACTCCCCCTGAGGATGACTCAGAGGTTGCCCCTGAC...ACTGGTGTGCAGATGTACATGCAGACTAAGTACCCATATACATAAAATACATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | GTATGTATTTTATGTATATGGGTACTTAGTCTGCATGTACATCTGCACACCAGTGTGGGTTCTTCTGGATaGCCCAGGGGCTCAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VCILCIWVLSLHVHLHTSVGSSG*PRGSVP Trigger: TGGCACTGAGCCCCTGGGCCATCCAGAAGAACCCAC...ACTGGTGTGCAGATGTACATGCAGACTAAGTACCCATATACATAAAATACATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | CAGATAGTGAGGGCTGAGGCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTTTGGCCCAGAAAAGTaGGTTCTTCTGGATGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QIVRAEALLKESFIETEPFGPEK*VLLDGP Trigger: TGGGCCATCCAGAAGAACCCACTTTTCTGGGCCAAA...GGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGCCTCAGCCCTCACTATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | GAGGCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTAGGTAAGAATAGGTCTTaGCGCTCTTGGCATGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: EALLKESFIETEPWDQGLGKNRS*RSWHGL Trigger: AAGCCCATGCCAAGAGCGCCAAGACCTATTCTTACC...TAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | GCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATTGGGGTCCCCACTCCTaGCAAAGTTGGTCCAATAGG | + |
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Preference number: 4 (lower is better) Translates to: ALLKESFIETEPWDQGLYWGPHS*QSWSNR Trigger: CCTATTGGACCAACTTTGCCAGGAGTGGGGACCCCA...ATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | CAGATAGTGAGGGCTGAGGCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCAGAGTCATCTGTAGGTaGGACAGGAACAACCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: QIVRAEALLKESFIETEPRVICR*DRNNLG Trigger: TCCCAGGTTGTTCCTGTCCCACCTACAGATGACTCT...GGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGCCTCAGCCCTCACTATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR TCA 90 bp | GCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGGGGCACCCAGATATTaGGGTAGAGGCAGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLKESFIETEPWDQGLYGAPRY*GRGSLL Trigger: AAGAAGACTGCCTCTACCTCAATATCTGGGTGCCCC...ATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | GTATGTATTTTATGTATATGGGTACTTAGTCTGCATGTACATCTGCACACCAGTATCACAGGCAGGTTGTaGGACACCTGCTTCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: VCILCIWVLSLHVHLHTSITGRL*DTCFLP Trigger: GGGCAGGAAGCAGGTGTCCCACAACCTGCCTGTGAT...ACTGGTGTGCAGATGTACATGCAGACTAAGTACCCATATACATAAAATACATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR GCA 90 bp | GCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTTATGTATTATGGGGAGAGGGTCTaGAGGGAGACACTGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: ALLKQNPGTKAYMTLFMYYGERV*RETLAA Trigger: AGCTGCCAGTGTCTCCCTGCAGACCCTCTCCCCATA...ATACATAAATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | GCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATAGAAAATTGGCCCCTTaGCCAGATCCCATGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: ALLKESFIETEPWDQGLYRKLAP*PDPMRK Trigger: CTTCCTCATGGGATCTGGCCAAGGGGCCAATTTTCT...ATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | AGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTTATGGAGACCCTTGTTGTATaGGGAGAGGGTCTGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RALLKQNPGTKAYMTLFMETLVV*GEGLQG Trigger: TCCCTGCAGACCCTCTCCCCATACAACAAGGGTCTC...CATAAATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | GTATGTATTTTATGTATATGGGTACTTAGTCTGCATGTACATCTGCACACCAGTTGTAGATGTCAAAGGTaGCTTGGGCCCCCTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VCILCIWVLSLHVHLHTSCRCQR*LGPPSA Trigger: GGCTGAAGGGGGCCCAAGCCACCTTTGACATCTACA...ACTGGTGTGCAGATGTACATGCAGACTAAGTACCCATATACATAAAATACATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | GAGGCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATTTCCAAAGACGTACTaGAGGTCATCAGCATGGTCT | + |
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Preference number: 4 (lower is better) Translates to: EALLKESFIETEPWDQGLFPKTY*RSSAWS Trigger: AGACCATGCTGATGACCTCCAGTACGTCTTTGGAAA...TAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR TCA 90 bp | GTATGTATTTTATGTATATGGGTACTTAGTCTGCATGTACATCTGCACACCAGTCTGCCAAGCAGCAGGTaGGGCCAAGAAATAGAACCT | + |
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Preference number: 4 (lower is better) Translates to: VCILCIWVLSLHVHLHTSLPSSR*GQEIEP Trigger: AGGTTCTATTTCTTGGCCTCACCTGCTGCTTGGCAG...ACTGGTGTGCAGATGTACATGCAGACTAAGTACCCATATACATAAAATACATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR TCA 90 bp | GCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTTATGTATAGTGCCATACCACTCTaGCTGATGGCTCTCCGGATG | + |
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Preference number: 4 (lower is better) Translates to: ALLKQNPGTKAYMTLFMYSAIPL*LMALRM Trigger: CATCCGGAGAGCCATCAGTCAGAGTGGTATGGCACT...ATACATAAATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR GCA 90 bp | AGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTTATGGTCATCAGCATGGTCTaGCCCCATCCATTTGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: RALLKQNPGTKAYMTLFMVISMV*PHPFGV Trigger: TACCCCAAATGGATGGGGGCAGACCATGCTGATGAC...CATAAATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | GTATGTATTTTATGTATATGGGTACTTAGTCTGCATGTACATCTGCACACCAGTAAAAGTGGGTTCTTCTaGATGGCCCAGGGGCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: VCILCIWVLSLHVHLHTSKSGFF*MAQGLS Trigger: ACTGAGCCCCTGGGCCATCCAGAAGAACCCACTTTT...ACTGGTGTGCAGATGTACATGCAGACTAAGTACCCATATACATAAAATACATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | AGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTTATGGGTAGCCCAGTGGGGTaGCAAAAGGCTTTCCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: RALLKQNPGTKAYMTLFMGSPVG*QKAFQR Trigger: TCTTTGGAAAGCCTTTTGCCACCCCACTGGGCTACC...CATAAATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | GTATGTATTTTATGTATATGGGTACTTAGTCTGCATGTACATCTGCACACCAGTCACTCCTGGCAAAGTTaGTCCAATAGGCGATCATGG | + |
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Preference number: 4 (lower is better) Translates to: VCILCIWVLSLHVHLHTSHSWQS*SNRRSW Trigger: CCATGATCGCCTATTGGACCAACTTTGCCAGGAGTG...ACTGGTGTGCAGATGTACATGCAGACTAAGTACCCATATACATAAAATACATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR GCA 90 bp | GTATGTATTTTATGTATATGGGTACTTAGTCTGCATGTACATCTGCACACCAGTAACTTTTCTCTCAGGTaGTCCTTCATGGAAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: VCILCIWVLSLHVHLHTSNFSLR*SFMEAL Trigger: CAGCGCTTCCATGAAGGAGCACCTGAGAGAAAAGTT...ACTGGTGTGCAGATGTACATGCAGACTAAGTACCCATATACATAAAATACATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | GCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTTATGTATTCCAATAGGCGATCATaGCCTTGGAGACAGCCCTAT | + |
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Preference number: 4 (lower is better) Translates to: ALLKQNPGTKAYMTLFMYSNRRS*PWRQPY Trigger: ATAGGGCTGTCTCCAAGGCCATGATCGCCTATTGGA...ATACATAAATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CCA 90 bp | GCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTTATGTATAAGACCAAAGTTACCTaGAAGGTTAGCATCCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: ALLKQNPGTKAYMTLFMYKTKVT*KVSIPG Trigger: ACCGGGGATGCTAACCTTCCAGGTAACTTTGGTCTT...ATACATAAATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CCA 90 bp | TCAGGGGCAACCTCTGAGTCATCCTCAGGGGGAGTGAGGGTGTCCTaGTCACCAGTCACTGTGGGCAGCACCTCGAATGTCACAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: SGATSESSSGGVRVS*SPVTVGSTSNVTAQ Trigger: CTGGGCTGTGACATTCGAGGTGCTGCCCACAGTGACTGGTGACCAGGACACCCTCACTCCCCCTGAGGATGACTCAGAGGTTGCCCCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS TCA 90 bp | AGTGGGTTCTTCTGGATGGCCCAGGGGCTCAGTGCCATACCACTCTaGCTGATGGCTCTCCGGATGAGACCCTTGTTGTATGGGGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: SGFFWMAQGLSAIPL*LMALRMRPLLYGER Trigger: CCTCTCCCCATACAACAAGGGTCTCATCCGGAGAGCCATCAGTCAGAGTGGTATGGCACTGAGCCCCTGGGCCATCCAGAAGAACCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS GCA 90 bp | TTTGGCCCAGAAAAGTGGGTTCTTCTGGATGGCCCAGGGGCTCAGTaGCATACCACTCTGACTGATGGCTCTCCGGATGAGACCCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: FGPEKWVLLDGPGAQ*HTTLTDGSPDETLV Trigger: AACAAGGGTCTCATCCGGAGAGCCATCAGTCAGAGTGGTATGGCACTGAGCCCCTGGGCCATCCAGAAGAACCCACTTTTCTGGGCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CCA 90 bp | CACCCAGGCGATAGCCATGTGCTGATCTCGAAGACCAAAGTTACCTaGAAGGTTAGCATCCCCGGTGCTAAGGAAACCCAAGGGTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: HPGDSHVLISKTKVT*KVSIPGAKETQGSN Trigger: GTTGGACCCTTGGGTTTCCTTAGCACCGGGGATGCTAACCTTCCAGGTAACTTTGGTCTTCGAGATCAGCACATGGCTATCGCCTGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS TCA 90 bp | CCAAAGGCTGCAATGTTCCTCTTCACCCAGGCGATAGCCATGTGCTaGTCTCGAAGACCAAAGTTACCTGGAAGGTTAGCATCCCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: PKAAMFLFTQAIAMC*SRRPKLPGRLASPV Trigger: CACCGGGGATGCTAACCTTCCAGGTAACTTTGGTCTTCGAGATCAGCACATGGCTATCGCCTGGGTGAAGAGGAACATTGCAGCCTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CAA 90 bp | GCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGCCCCCTTCAGCCCCTaGGCGACAGTGTGTCCACTG | + |
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Preference number: 5 (lower is better) Translates to: ALLKESFIETEPWDQGLYAPFSP*ATVCPL Trigger: CAGTGGACACACTGTCGCCAAGGGGCTGAAGGGGGC...ATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CAA 90 bp | GAGGCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTACTCCGGATGAGACCCTaGTTGTATGGGGAGAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: EALLKESFIETEPWDQGLLRMRP*LYGERV Trigger: GACCCTCTCCCCATACAACAAGGGTCTCATCCGGAG...TAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CAA 90 bp | GCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTTATGTATAGCCTTCAGCGTCCCTaGCCAGCCAGGGTGACGCTG | + |
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Preference number: 5 (lower is better) Translates to: ALLKQNPGTKAYMTLFMYSLQRP*PARVTL Trigger: CAGCGTCACCCTGGCTGGCAAGGGACGCTGAAGGCT...ATACATAAATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CAA 90 bp | GAGGCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTAGTAGAGGCAGTCTTCTaGCCCATAGGTGTTGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: EALLKESFIETEPWDQGLVEAVF*PIGVVL Trigger: CAGGACAACACCTATGGGCAAGAAGACTGCCTCTAC...TAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CAA 90 bp | AGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTTATGACACAGCCCCCAACTTaGCAGCACAAGCCGCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: RALLKQNPGTKAYMTLFMTQPPT*QHKPLP Trigger: TGGCAGCGGCTTGTGCTGCAAAGTTGGGGGCTGTGT...CATAAATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CAA 90 bp | CAGATAGTGAGGGCTGAGGCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCGCAAAGGGGATGCCCTaGAAGATGTCAACAGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: QIVRAEALLKESFIETEPAKGMP*KMSTES Trigger: TGACTCTGTTGACATCTTCAAGGGCATCCCCTTTGC...GGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGCCTCAGCCCTCACTATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CAA 90 bp | GTATGTATTTTATGTATATGGGTACTTAGTCTGCATGTACATCTGCACACCAGTGTGACCACAATGACGTaGCCCCGAGTGGCGATCTCC | + |
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Preference number: 5 (lower is better) Translates to: VCILCIWVLSLHVHLHTSVTTMT*PRVAIS Trigger: GGAGATCGCCACTCGGGGCAACGTCATTGTGGTCAC...ACTGGTGTGCAGATGTACATGCAGACTAAGTACCCATATACATAAAATACATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CAA 90 bp | AAGGAGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTAGACACGCAGCCATCTaGCCAGTATCCTCTGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: KESFIETEPWDQGLYDFIRHAAI*PVSSVG Trigger: CCCCACAGAGGATACTGGCAAGATGGCTGCGTGTCT...AATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CAA 90 bp | GTATGTATTTTATGTATATGGGTACTTAGTCTGCATGTACATCTGCACACCAGTACCATCACAGGCAGGTaGTGGGACACCTGCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: VCILCIWVLSLHVHLHTSTITGR*WDTCFL Trigger: CAGGAAGCAGGTGTCCCACAACCTGCCTGTGATGGT...ACTGGTGTGCAGATGTACATGCAGACTAAGTACCCATATACATAAAATACATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CAA 90 bp | CAGATAGTGAGGGCTGAGGCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTGTAGGCATCGTTTCTaGAAGTTTGTAGCCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: QIVRAEALLKESFIETEPCRHRF*KFVAFS Trigger: GCTGAAGGCTACAAACTTCAAGAAACGATGCCTACA...GGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGCCTCAGCCCTCACTATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CAA 90 bp | GCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTTATGTATCGGATGAGACCCTTGTaGTATGGGGAGAGGGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: ALLKQNPGTKAYMTLFMYRMRPL*YGERVC Trigger: GCAGACCCTCTCCCCATACAACAAGGGTCTCATCCG...ATACATAAATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CAA 90 bp | CAGATAGTGAGGGCTGAGGCTTTATTGAAGGAGAGCTTTATTGAAACAGAACCCTTCTTAGCAATCGTTTaGGCCCAGAAAAGTGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: QIVRAEALLKESFIETEPFLAIV*AQKSGF Trigger: GAACCCACTTTTCTGGGCCAAAACGATTGCTAAGAA...GGGTTCTGTTTCAATAAAGCTCTCCTTCAATAAAGCCTCAGCCCTCACTATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CAA 90 bp | AGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTTATGAAGAGACTGAGCTTCTaGTTGACGCCCTCCACGAAA | + |
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Preference number: 5 (lower is better) Translates to: RALLKQNPGTKAYMTLFMKRLSF*LTPSTK Trigger: TTTCGTGGAGGGCGTCAACAAGAAGCTCAGTCTCTT...CATAAATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CAA 90 bp | GCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTTATGTATGAGAAAATTGGCCCCTaGGCCAGATCCCATGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: ALLKQNPGTKAYMTLFMYEKIGP*ARSHEE Trigger: TTCCTCATGGGATCTGGCCAAGGGGCCAATTTTCTC...ATACATAAATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS-3UTR CAA 90 bp | AGAGCTTTATTGAAACAGAACCCTGGGACCAAGGCTTATATGACTTTATTTATGGTGTTGTTGTACAGGTaGATGGGATCATCGGGAATG | + |
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Preference number: 5 (lower is better) Translates to: RALLKQNPGTKAYMTLFMVLLYR*MGSSGM Trigger: CATTCCCGATGATCCCATCAACCTGTACAACAACAC...CATAAATAAAGTCATATAAGCCTTGGTCCCAGGGTTCTGTTTCAATAAAGCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CCA 72 bp | AGTTGCCCATGTTGGGGTCCCCACTCCTGGCAAAGTTaGTCCAATAGGCGATCATGGCCTTGGAGACAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SCPCWGPHSWQS*SNRRSWPWRQP Trigger: GGGCTGTCTCCAAGGCCATGATCGCCTATTGGACCAACTTTGCCAGGAGTGGGGACCCCAACATGGGCAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS GCA 72 bp | GAAAAGTGGGTTCTTCTGGATGGCCCAGGGGCTCAGTaGCATACCACTCTGACTGATGGCTCTCCGGATGAG | + |
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Preference number: 6 (lower is better) Translates to: EKWVLLDGPGAQ*HTTLTDGSPDE Trigger: CTCATCCGGAGAGCCATCAGTCAGAGTGGTATGGCACTGAGCCCCTGGGCCATCCAGAAGAACCCACTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CCA 72 bp | TGGCATGGGCTTTGTGCTGGGCCAGCGCTATCTCCGTaGGGATCAGGAAGAGTACATCAGTCTCAAAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: WHGLCAGPALSP*GSGRVHQSQRP Trigger: TGGCCTTTGAGACTGATGTACTCTTCCTGATCCCCACGGAGATAGCGCTGGCCCAGCACAAAGCCCATGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CAA 72 bp | CTGGGGCACCCAGATATTGAGGTAGAGGCAGTCTTCTaGCCCATAGGTGTTGTCCTGGGTGATGGTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LGHPDIEVEAVF*PIGVVLGDGGL Trigger: CAGGCCACCATCACCCAGGACAACACCTATGGGCAAGAAGACTGCCTCTACCTCAATATCTGGGTGCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CAA 90 bp | CCCTTGAAGATGTCAACAGAGTCACCACCCAAGAGACTGAGCTTCTaGTTGACGCCCTCCACGAAACCGCCTTCTGTGTACACAGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: PLKMSTESPPKRLSF*LTPSTKPPSVYTAP Trigger: GGGGGCTGTGTACACAGAAGGCGGTTTCGTGGAGGGCGTCAACAAGAAGCTCAGTCTCTTGGGTGGTGACTCTGTTGACATCTTCAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS TCA 72 bp | GCAACTTGTAGGCCAGTGTCAAGGCCCGGGGATCTGTaGTCTTCAGACACGCAGCCATCTTGCCAGTATCCT | + |
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Preference number: 6 (lower is better) Translates to: ATCRPVSRPGDL*SSDTQPSCQYP Trigger: AGGATACTGGCAAGATGGCTGCGTGTCTGAAGATCACAGATCCCCGGGCCTTGACACTGGCCTACAAGTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CAA 72 bp | GCCCGGGGATCTGTGATCTTCAGACACGCAGCCATCTaGCCAGTATCCTCTGTGGGGCATCCTACCTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: ARGSVIFRHAAI*PVSSVGHPTFL Trigger: TAAGAAGGTAGGATGCCCCACAGAGGATACTGGCAAGATGGCTGCGTGTCTGAAGATCACAGATCCCCGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CAA 72 bp | GCATCGTTTCTTGAAGTTTGTAGCCTTCAGCGTCCCTaGCCAGCCAGGGTGACGCTGAGGATTCTCCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: ASFLEVCSLQRP*PARVTLRILQG Trigger: ACCTTGGAGAATCCTCAGCGTCACCCTGGCTGGCAAGGGACGCTGAAGGCTACAAACTTCAAGAAACGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CAA 72 bp | TTGTCCTGGGTGATGGTGGCCTGTAGGCATCGTTTCTaGAAGTTTGTAGCCTTCAGCGTCCCTTGCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LSWVMVACRHRF*KFVAFSVPCQP Trigger: TGGCTGGCAAGGGACGCTGAAGGCTACAAACTTCAAGAAACGATGCCTACAGGCCACCATCACCCAGGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CAA 90 bp | TTGAAGATGTCAACAGAGTCACCACCCAAGAGACTGAGCTTCTTGTaGACGCCCTCCACGAAACCGCCTTCTGTGTACACAGCCCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: LKMSTESPPKRLSFL*TPSTKPPSVYTAPN Trigger: GTTGGGGGCTGTGTACACAGAAGGCGGTTTCGTGGAGGGCGTCAACAAGAAGCTCAGTCTCTTGGGTGGTGACTCTGTTGACATCTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CAA 90 bp | AGTGTCAAGGCCCGGGGATCTGTGATCTTCAGACACGCAGCCATCTaGCCAGTATCCTCTGTGGGGCATCCTACCTTCTTAGCAATCGTT | + |
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Preference number: 6 (lower is better) Translates to: SVKARGSVIFRHAAI*PVSSVGHPTFLAIV Trigger: AACGATTGCTAAGAAGGTAGGATGCCCCACAGAGGATACTGGCAAGATGGCTGCGTGTCTGAAGATCACAGATCCCCGGGCCTTGACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CAA 72 bp | TCAACAGAGTCACCACCCAAGAGACTGAGCTTCTTGTaGACGCCCTCCACGAAACCGCCTTCTGTGTACACA | + |
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Preference number: 6 (lower is better) Translates to: STESPPKRLSFL*TPSTKPPSVYT Trigger: TGTGTACACAGAAGGCGGTTTCGTGGAGGGCGTCAACAAGAAGCTCAGTCTCTTGGGTGGTGACTCTGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CAA 72 bp | ATGTCAACAGAGTCACCACCCAAGAGACTGAGCTTCTaGTTGACGCCCTCCACGAAACCGCCTTCTGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: MSTESPPKRLSF*LTPSTKPPSVY Trigger: GTACACAGAAGGCGGTTTCGTGGAGGGCGTCAACAAGAAGCTCAGTCTCTTGGGTGGTGACTCTGTTGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CAA 72 bp | TTCTCCAAGGTCTTGGCAGTGGCAAAGGGGATGCCCTaGAAGATGTCAACAGAGTCACCACCCAAGAGACTG | + |
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Preference number: 6 (lower is better) Translates to: FSKVLAVAKGMP*KMSTESPPKRL Trigger: CAGTCTCTTGGGTGGTGACTCTGTTGACATCTTCAAGGGCATCCCCTTTGCCACTGCCAAGACCTTGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CAA 72 bp | TCCTCTGTGGGGCATCCTACCTTCTTAGCAATCGTTTaGGCCCAGAAAAGTGGGTTCTTCTGGATGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSVGHPTFLAIV*AQKSGFFWMAQ Trigger: CTGGGCCATCCAGAAGAACCCACTTTTCTGGGCCAAAACGATTGCTAAGAAGGTAGGATGCCCCACAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS TCA 72 bp | GCAATGTTCCTCTTCACCCAGGCGATAGCCATGTGCTaGTCTCGAAGACCAAAGTTACCTGGAAGGTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: AMFLFTQAIAMC*SRRPKLPGRLA Trigger: TGCTAACCTTCCAGGTAACTTTGGTCTTCGAGATCAGCACATGGCTATCGCCTGGGTGAAGAGGAACATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS GCA 72 bp | GTCACAGCCCAGAACTTCAGGAACTTTTCTCTCAGGTaGTCCTTCATGGAAGCGCTGGTTATCGTCTTAGTG | + |
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Preference number: 6 (lower is better) Translates to: VTAQNFRNFSLR*SFMEALVIVLV Trigger: CACTAAGACGATAACCAGCGCTTCCATGAAGGAGCACCTGAGAGAAAAGTTCCTGAAGTTCTGGGCTGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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| CDS CCA 72 bp | GATAGCCATGTGCTGATCTCGAAGACCAAAGTTACCTaGAAGGTTAGCATCCCCGGTGCTAAGGAAACCCAA | + |
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Preference number: 6 (lower is better) Translates to: DSHVLISKTKVT*KVSIPGAKETQ Trigger: TTGGGTTTCCTTAGCACCGGGGATGCTAACCTTCCAGGTAACTTTGGTCTTCGAGATCAGCACATGGCTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028161.6 |
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