Pregenerated sensors for CEBPG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056216Ensembl transcript IDs: ENSMUST00000070191.10, ENSMUST00000130491.3
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCGACACTGGGGTTACCAAGTCCTAGTAGAACACAGGGCCAGAAATaGCCACATTCAAACAAGATTCCCAGAACCCAAACTTTGATCACA | + |
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Preference number: 1 (lower is better) Translates to: ATLGLPSPSRTQGQK*PHSNKIPRTQTLIT Trigger: TGTGATCAAAGTTTGGGTTCTGGGAATCTTGTTTGAATGTGGTCATTTCTGGCCCTGTGTTCTACTAGGACTTGGTAACCCCAGTGTCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR TCA 90 bp | AGTCATATTTTAGTTAAATCCTTACTGAGATCCCAAAGTCACCTGTaGCCCAAAGGGCTAGACAGAGAGGGTGGCTCTGATTCCCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: SHILVKSLLRSQSHL*PKGLDREGGSDSPS Trigger: AGAGGGGGAATCAGAGCCACCCTCTCTGTCTAGCCCTTTGGGTCACAGGTGACTTTGGGATCTCAGTAAGGATTTAACTAAAATATGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR CCA 90 bp | GCACTGGTAACCACAAATTCCACAAGAACATCCATTTGTGAAAGCTaGTGTTTAGAAGTAAGAGTTTCCGGAAGTCTGCCTAGCCTCATA | + |
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Preference number: 1 (lower is better) Translates to: ALVTTNSTRTSICES*CLEVRVSGSLPSLI Trigger: TATGAGGCTAGGCAGACTTCCGGAAACTCTTACTTCTAAACACCAGCTTTCACAAATGGATGTTCTTGTGGAATTTGTGGTTACCAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR GCA 90 bp | AAGCTTCCCTGGAAAGGGGTGAGAGGGTTAAGAAACAAAAGCAGCTaGATCCTTTCTTATCAAACTGTACATGTTTCTAGTTTCATAAAT | + |
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Preference number: 1 (lower is better) Translates to: KLPWKGVRGLRNKSS*ILSYQTVHVSSFIN Trigger: ATTTATGAAACTAGAAACATGTACAGTTTGATAAGAAAGGATGCAGCTGCTTTTGTTTCTTAACCCTCTCACCCCTTTCCAGGGAAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCTCCAGGGCCCTGAAAGCTTCTGTCCCGAACAGTCAGCAACTTCCTGCCCCAGAACCCAAACTTTaGTCACACAAGACCCATGTT | + |
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Preference number: 2 (lower is better) Translates to: LSSRALKASVPNSQQLPAPEPKL*SHKTHV Trigger: AACATGGGTCTTGTGTGATCAAAGTTTGGGTTCTGG...GGCAGGAAGTTGCTGACTGTTCGGGACAGAAGCTTTCAGGGCCCTGGAGCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR-3UTR TCA 90 bp | CCCGCTGTCCATGCACTCCAGCCCAGGACAACAGCAAGAGGCACCTTGCAGGCTAATAAAATCACAAACTaGGGAACCCAGATGGAATTC | + |
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Preference number: 2 (lower is better) Translates to: PAVHALQPRTTARGTLQANKITN*GTQMEF Trigger: GAATTCCATCTGGGTTCCTCAGTTTGTGATTTTATT...AGCCTGCAAGGTGCCTCTTGCTGTTGTCCTGGGCTGGAGTGCATGGACAGCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR-3UTR CCA 90 bp | ATTAGCTGTGGAATGGAATCTTCCCCAGCCTGTCACACAAACAGGCGTCTTTTCGGCACGAAGCTTCCCTaGAAAGGGGTGAGAGGGTTA | + |
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Preference number: 2 (lower is better) Translates to: ISCGMESSPACHTNRRLFGTKLP*KGVRGL Trigger: TAACCCTCTCACCCCTTTCCAGGGAAGCTTCGTGCC...GAAAAGACGCCTGTTTGTGTGACAGGCTGGGGAAGATTCCATTCCACAGCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR CAA 90 bp | AGAGGCACCTTGCAGGCTCTTTGGGGCCAATTACAAATGAACTTCTaGCTCATGTCCAAGATAAAGAAACCCACGAAGAAAAAGTCGTTG | + |
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Preference number: 2 (lower is better) Translates to: RGTLQALWGQLQMNF*LMSKIKKPTKKKSL Trigger: CAACGACTTTTTCTTCGTGGGTTTCTTTATCTTGGACATGAGCAAGAAGTTCATTTGTAATTGGCCCCAAAGAGCCTGCAAGGTGCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR CAA 90 bp | AGGTATTCTCTCATTAGAACCCAGTACCTTCTACATGACCTTCCATaGTCCCATTCCTACAAAAGAGCCATTTCTGGGGAAGTGAGGATT | + |
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Preference number: 2 (lower is better) Translates to: RYSLIRTQYLLHDLP*SHSYKRAISGEVRI Trigger: AATCCTCACTTCCCCAGAAATGGCTCTTTTGTAGGAATGGGACAATGGAAGGTCATGTAGAAGGTACTGGGTTCTAATGAGAGAATACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR-3UTR GCA 90 bp | CTGCATTCCAAGTTTAGAGACAACTCCTTCCCTGTCAACTCAGGGAAATCCAAATCAAACAACAAAAGGTaGCTCTTCACACAAGCACAC | + |
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Preference number: 2 (lower is better) Translates to: LHSKFRDNSFPVNSGKSKSNNKR*LFTQAH Trigger: GTGTGCTTGTGTGAAGAGGCACCTTTTGTTGTTTGA...TTTGGATTTCCCTGAGTTGACAGGGAAGGAGTTGTCTCTAAACTTGGAATGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR-3UTR CCA 90 bp | CATAAATTGAGAACCGTAAAAACTGAATGGCCTCATGACCCAATTTCAAACACCCAACCTGAGCGACACTaGGGTTACCAAGTCCTAGTA | + |
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Preference number: 2 (lower is better) Translates to: HKLRTVKTEWPHDPISNTQPERH*GYQVLV Trigger: TACTAGGACTTGGTAACCCCAGTGTCGCTCAGGTTG...GGTGTTTGAAATTGGGTCATGAGGCCATTCAGTTTTTACGGTTCTCAATTTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTTCACACAAGCACACACACACGAACACTTTACCTTTAAAAATCATGGCCCCTTAGGACAGAGACCATaGTTATCTAATAAGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LFTQAHTHEHFTFKNHGPLGQRP*LSNKQK Trigger: CTTCTGCTTATTAGATAAGCATGGTCTCTGTCCTAA...GGGGCCATGATTTTTAAAGGTAAAGTGTTCGTGTGTGTGTGCTTGTGTGAAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR-3UTR CCA 90 bp | GCCCAAGACCACTTCTTCCTTCCTAAACACACTTTGTATTTTAACCACCTCCTCCAAAAGAGCCATTTCTaGGGAAGTGAGGATTTATTA | + |
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Preference number: 2 (lower is better) Translates to: AQDHFFLPKHTLYFNHLLQKSHF*GSEDLL Trigger: TAATAAATCCTCACTTCCCCAGAAATGGCTCTTTTG...GAGGAGGTGGTTAAAATACAAAGTGTGTTTAGGAAGGAAGAAGTGGTCTTGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR-3UTR TCA 90 bp | AGTATGGAACTACTTGCTTGTGCTAACAATCTCTTTTACAAAGGTAAGAGCAAAACACAGGGCCAGAAATaGCCACATTCAAACAAGATT | + |
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Preference number: 2 (lower is better) Translates to: SMELLACANNLFYKGKSKTQGQK*PHSNKI Trigger: AATCTTGTTTGAATGTGGTCATTTCTGGCCCTGTGT...TTTGCTCTTACCTTTGTAAAAGAGATTGTTAGCACAAGCAAGTAGTTCCATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR CAA 90 bp | GTAAGAACATTTGAGTCCAAACATTTGTGTTCAGTATGGAACTACTaGCTTGTGCTAACAATCTCTTTTACAAAGGTAAGAGCAAAGATG | + |
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Preference number: 2 (lower is better) Translates to: VRTFESKHLCSVWNY*LVLTISFTKVRAKM Trigger: CATCTTTGCTCTTACCTTTGTAAAAGAGATTGTTAGCACAAGCAAGTAGTTCCATACTGAACACAAATGTTTGGACTCAAATGTTCTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR-3UTR TCA 90 bp | AGTATGGAACTACTTGCTTGTGCTAACAATCTCTTTTACAAAGGTAAGAGCAAACTCATTTGTATGTTCTaGTTTGATACCTTGAGCACT | + |
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Preference number: 2 (lower is better) Translates to: SMELLACANNLFYKGKSKLICMF*FDTLST Trigger: AGTGCTCAAGGTATCAAATCAGAACATACAAATGAG...TTTGCTCTTACCTTTGTAAAAGAGATTGTTAGCACAAGCAAGTAGTTCCATACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR-3UTR CAA 90 bp | CCCGCTGTCCATGCACTCCAGCCCAGGACAACAGCAAGAGGCACCTTGCAGGCTAACCCCACTCATTTCTaGGCTCCCAAAGAACAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PAVHALQPRTTARGTLQANPTHF*APKEQC Trigger: ACACTGTTCTTTGGGAGCCAAGAAATGAGTGGGGTT...AGCCTGCAAGGTGCCTCTTGCTGTTGTCCTGGGCTGGAGTGCATGGACAGCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR CCA 72 bp | AGACCGAGTTCAGCCACTGAAGCAAGGGGTGCAGGGTaGTCACACCTCTCATGTTCAAGTCACAAGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: RPSSATEARGAG*SHLSCSSHKPW Trigger: CCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGCTTCAGTGGCTGAACTCGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR TCA 72 bp | AACAACCTCCAATGGAAGGAGACCGAGTTCAGCCACTaGAGCAAGGGGTGCAGGGTGGTCACACCTCTCATG | + |
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Preference number: 3 (lower is better) Translates to: NNLQWKETEFSH*SKGCRVVTPLM Trigger: CATGAGAGGTGTGACCACCCTGCACCCCTTGCTTCAGTGGCTGAACTCGGTCTCCTTCCATTGGAGGTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR GCA 72 bp | CCTGAAAGCTTCTGTCCCGAACAGTCAGCAACTTCCTaGCATACTAGGGAGCAACCTGAGCGACACTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: PESFCPEQSATS*HTREQPERHWG Trigger: ACCCCAGTGTCGCTCAGGTTGCTCCCTAGTATGGCAGGAAGTTGCTGACTGTTCGGGACAGAAGCTTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCAACGAACTCAGAAATCCGCCTaGCTCTGTCTCCTAAGTGCTGGGATTAAAGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWQRTQKSA*LCLLSAGIKGV Trigger: CACGCCTTTAATCCCAGCACTTAGGAGACAGAGGCAGGCGGATTTCTGAGTTCGTTGCCAGCCTGGTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR CCA 72 bp | ACTTCCTGCCATACTAGGGAGCAACCTGAGCGACACTaGGGTTACCAAGTCCTAGTAGAACACAGGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: TSCHTREQPERH*GYQVLVEHRAR Trigger: TCTGGCCCTGTGTTCTACTAGGACTTGGTAACCCCAGTGTCGCTCAGGTTGCTCCCTAGTATGGCAGGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR CCA 72 bp | ACAAGCTCCATGGGTTGTCCAGGCACGAAGCTTCCCTaGAAAGGGGTGAGAGGGTTAAGAAACAAAAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: TSSMGCPGTKLP*KGVRGLRNKSS Trigger: GCTGCTTTTGTTTCTTAACCCTCTCACCCCTTTCCAGGGAAGCTTCGTGCCTGGACAACCCATGGAGCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR CCA 72 bp | CCCAGGACAACAGCAAGAGGCACCTTGCAGGCTCTTTaGGGCCAATTACAAATGAACTTCTTGCTCATGTCC | + |
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Preference number: 3 (lower is better) Translates to: PRTTARGTLQAL*GQLQMNFLLMS Trigger: GGACATGAGCAAGAAGTTCATTTGTAATTGGCCCCAAAGAGCCTGCAAGGTGCCTCTTGCTGTTGTCCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR GCA 72 bp | ACAGGCAGCCCTTTCATCCTGCCCCCTACACTGGGATaGAGTTTTAAGTTAGACCAAACAACTACAATCAAC | + |
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Preference number: 3 (lower is better) Translates to: TGSPFILPPTLG*SFKLDQTTTIN Trigger: GTTGATTGTAGTTGTTTGGTCTAACTTAAAACTGCATCCCAGTGTAGGGGGCAGGATGAAAGGGCTGCCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR TCA 72 bp | GGGTTACCAAGTCCTAGTAGAACACAGGGCCAGAAATaGCCACATTCAAACAAGATTCCCAGAACCCAAACT | + |
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Preference number: 3 (lower is better) Translates to: GLPSPSRTQGQK*PHSNKIPRTQT Trigger: AGTTTGGGTTCTGGGAATCTTGTTTGAATGTGGTCATTTCTGGCCCTGTGTTCTACTAGGACTTGGTAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR-3UTR CAA 90 bp | GGCCAATTACAAATGAACTTCTTGCTCATGTCCAAGATAAAGAAACCCACGAAGCCCAGAACCCAAACTTaGATCACACAAGACCCATGT | + |
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Preference number: 3 (lower is better) Translates to: GQLQMNFLLMSKIKKPTKPRTQT*ITQDPC Trigger: ACATGGGTCTTGTGTGATCAAAGTTTGGGTTCTGGG...CTTCGTGGGTTTCTTTATCTTGGACATGAGCAAGAAGTTCATTTGTAATTGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR TCA 72 bp | AAGGTAAGAGCAAAGATGGACCTCATTTGTATGTTCTaGTTTGATACCTTGAGCACTGACCTCCCTACAGCT | + |
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Preference number: 3 (lower is better) Translates to: KVRAKMDLICMF*FDTLSTDLPTA Trigger: AGCTGTAGGGAGGTCAGTGCTCAAGGTATCAAATCAGAACATACAAATGAGGTCCATCTTTGCTCTTACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR GCA 72 bp | ACCGTCTCAGGAACTAACAAACTGACACTGGAGCTGTaGACAAACTATGAGTTACCAAGAAGACGATCTAAA | + |
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Preference number: 3 (lower is better) Translates to: TVSGTNKLTLEL*TNYELPRRRSK Trigger: TTTAGATCGTCTTCTTGGTAACTCATAGTTTGTGCACAGCTCCAGTGTCAGTTTGTTAGTTCCTGAGACGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR CCA 72 bp | ACCACAAATTCCACAAGAACATCCATTTGTGAAAGCTaGTGTTTAGAAGTAAGAGTTTCCGGAAGTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: TTNSTRTSICES*CLEVRVSGSLP Trigger: AGGCAGACTTCCGGAAACTCTTACTTCTAAACACCAGCTTTCACAAATGGATGTTCTTGTGGAATTTGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR-3UTR CAA 90 bp | CACACACACACGAACACTTTACCTTTAAAAATCATGGCCCCATTGGCAGTTATTCTACATGACCTTCCATaGTCCCATTCCTACAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: HTHTNTLPLKIMAPLAVILHDLP*SHSYKR Trigger: TCTTTTGTAGGAATGGGACAATGGAAGGTCATGTAG...AATAACTGCCAATGGGGCCATGATTTTTAAAGGTAAAGTGTTCGTGTGTGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR TCA 72 bp | AGATGGACCTCATTTGTATGTTCTGATTTGATACCTTaGGCACTGACCTCCCTACAGCTTTTTAAAGTCCTA | + |
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Preference number: 3 (lower is better) Translates to: RWTSFVCSDLIP*ALTSLQLFKVL Trigger: TAGGACTTTAAAAAGCTGTAGGGAGGTCAGTGCTCAAGGTATCAAATCAGAACATACAAATGAGGTCCATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR CCA 72 bp | TCATACTTGGCTGAATATCAAGTTGAAGGCCAGCACTaGCTACAAGACCATCTCACTAAAACTGAAAAACAA | + |
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Preference number: 3 (lower is better) Translates to: SYLAEYQVEGQH*LQDHLTKTEKQ Trigger: TTGTTTTTCAGTTTTAGTGAGATGGTCTTGTAGCCAGTGCTGGCCTTCAACTTGATATTCAGCCAAGTATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR TCA 72 bp | AGAACACAAAAGCATACTAATGGAAGCAATAACACATaGGGTCTGGAAGAACAGCCCACTAAACTAGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: RTQKHTNGSNNT*GLEEQPTKLEK Trigger: TTTTTCTAGTTTAGTGGGCTGTTCTTCCAGACCTCATGTGTTATTGCTTCCATTAGTATGCTTTTGTGTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR TCA 90 bp | GCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCCCCAGCGGGCACCAGCTaGGGAACCTGCTGTAAGCCG | + |
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Preference number: 4 (lower is better) Translates to: ARGAGWSHLSCSSHKPWAPAGTS*GTCCKP Trigger: CGGCTTACAGCAGGTTCCTCAGCTGGTGCCCGCTGG...GGCCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR GCA 90 bp | GCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCCGGGCTGCACGTTGTCTaGGAGGCTGTGCGCATGCTC | + |
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Preference number: 4 (lower is better) Translates to: ARGAGWSHLSCSSHKPWAGLHVV*EAVRML Trigger: GAGCATGCGCACAGCCTCGCAGACAACGTGCAGCCC...GGCCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR CCA 90 bp | CCCGCTGTCCATGCACTCCAGCCCAGGACAACAGCAAGAGGCACCTTGCAGGCTCCTGCTGTAAGCCGCTaGCATGTGCCTGAGTATGAA | + |
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Preference number: 4 (lower is better) Translates to: PAVHALQPRTTARGTLQAPAVSR*HVPEYE Trigger: TTCATACTCAGGCACATGCCAGCGGCTTACAGCAGG...AGCCTGCAAGGTGCCTCTTGCTGTTGTCCTGGGCTGGAGTGCATGGACAGCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR GCA 90 bp | CCCGCTGTCCATGCACTCCAGCCCAGGACAACAGCAAGAGGCACCTTGCAGGCTGAGCTCTTTTTGCTTTaGTTGCTTGGAGGCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: PAVHALQPRTTARGTLQAELFLL*LLGGTA Trigger: GGCTGTGCCTCCAAGCAAGCAAAGCAAAAAGAGCTC...AGCCTGCAAGGTGCCTCTTGCTGTTGTCCTGGGCTGGAGTGCATGGACAGCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR CCA 90 bp | AGCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCTTTGCTTTGCTTGCTTaGAGGCACAGCCTTGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: SKGCRVVTPLMFKSQALGFALLA*RHSLAP Trigger: GGGGGCAAGGCTGTGCCTCCAAGCAAGCAAAGCAAA...GCCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR CCA 90 bp | AGCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCCCTGCTGTAAGCCGCTaGCATGTGCCTGAGTATGAA | + |
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Preference number: 4 (lower is better) Translates to: SKGCRVVTPLMFKSQALGPAVSR*HVPEYE Trigger: TTCATACTCAGGCACATGCCAGCGGCTTACAGCAGG...GCCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR GCA 90 bp | GCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCCTGGGTGAGCTCTTTTTaGTTTGCTTGCTTGGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: ARGAGWSHLSCSSHKPWAWVSSF*FACLEA Trigger: TGCCTCCAAGCAAGCAAAGCAAAAAGAGCTCACCCA...GGCCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR GCA 90 bp | GCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCCTTGTCTGCGAGGCTGTaGGCATGCTCAAGAAACAAA | + |
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Preference number: 4 (lower is better) Translates to: ARGAGWSHLSCSSHKPWALSARL*ACSRNK Trigger: TTTGTTTCTTGAGCATGCGCACAGCCTCGCAGACAA...GGCCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| 3UTR CAA 72 bp | TCTAAGGCATCAGGAGCACTCTACAAGCTCCATGGGTaGTCCAGGCACGAAGCTTCCCTGGAAAGGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SKASGALYKLHG*SRHEASLERGE Trigger: CTCACCCCTTTCCAGGGAAGCTTCGTGCCTGGACAACCCATGGAGCTTGTAGAGTGCTCCTGATGCCTTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR GCA 90 bp | AGCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCTCTTTTTGCTTTGCTTaGTTGGAGGCACAGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: SKGCRVVTPLMFKSQALGSFCFA*LEAQPC Trigger: GCAAGGCTGTGCCTCCAAGCAAGCAAAGCAAAAAGA...GCCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR GCA 90 bp | GAAGCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGAGCTCTTTTTGCTTTaGTTGCTTGGAGGCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: EARGAGWSHLSCSSHKPWELFLL*LLGGTA Trigger: GGCTGTGCCTCCAAGCAAGCAAAGCAAAAAGAGCTC...CCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR TCA 90 bp | GCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCCGTGCCTGAGTATGAATaGCACTTATTCCATTCACTC | + |
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Preference number: 4 (lower is better) Translates to: ARGAGWSHLSCSSHKPWAVPEYE*HLFHSL Trigger: GAGTGAATGGAATAAGTGTCATTCATACTCAGGCAC...GGCCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR TCA 90 bp | GCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCCGTTCATTCTCTTCCTTaGGCTGGTTTACTCTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: ARGAGWSHLSCSSHKPWAVHSLP*AGLLFA Trigger: TGCAAAGAGTAAACCAGCTCAAGGAAGAGAATGAAC...GGCCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR GCA 90 bp | GAAGCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCGAGGCTGTGCGCATaGTCAAGAAACAAATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EARGAGWSHLSCSSHKPWARLCA*SRNKSF Trigger: GAAAGATTTGTTTCTTGAGCATGCGCACAGCCTCGC...CCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR CCA 90 bp | GCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCCCACTATTCCGATCCATaGGTGAGCTCTTTTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ARGAGWSHLSCSSHKPWAHYSDP*VSSFCF Trigger: AAAGCAAAAAGAGCTCACCCATGGATCGGAATAGTG...GGCCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| 3UTR CAA 72 bp | ACAACTCCTTCCCTGTCAACTCAGGGAAATCCAAACTaGCACAAAGTACCCCGCTGTCCATGCACTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TTPSLSTQGNPN*HKVPRCPCTPA Trigger: GGCTGGAGTGCATGGACAGCGGGGTACTTTGTGCAAGTTTGGATTTCCCTGAGTTGACAGGGAAGGAGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR TCA 90 bp | GAAGCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGATTCCGATCCATGGGTaGGCTCTTTTTGCTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EARGAGWSHLSCSSHKPWIPIHG*ALFALL Trigger: AAGCAAAGCAAAAAGAGCTCACCCATGGATCGGAAT...CCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| 3UTR CAA 72 bp | GCCCAGGACAACAGCAAGAGGCACCTTGCAGGCTCTTaGGGGCCAATTACAAATGAACTTCTTGCTCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: AQDNSKRHLAGS*GPITNELLAHV Trigger: GACATGAGCAAGAAGTTCATTTGTAATTGGCCCCAAAGAGCCTGCAAGGTGCCTCTTGCTGTTGTCCTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR CAA 72 bp | GGTGGAGGCAGGAAGGCCAGAAGTTCAAGGTCATACTaGGCTGAATATCAAGTTGAAGGCCAGCACTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GGGRKARSSRSY*AEYQVEGQHWL Trigger: TAGCCAGTGCTGGCCTTCAACTTGATATTCAGCCAAGTATGACCTTGAACTTCTGGCCTTCCTGCCTCCACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR TCA 90 bp | CATAAATTGAGAACCGTAAAAACTGAATGGCCTCATGACCCAATTTCAAACACCCCAGCGGGCACCAGCTaGGGAACCTGCTGTAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HKLRTVKTEWPHDPISNTPAGTS*GTCCKP Trigger: CGGCTTACAGCAGGTTCCTCAGCTGGTGCCCGCTGG...GGTGTTTGAAATTGGGTCATGAGGCCATTCAGTTTTTACGGTTCTCAATTTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR TCA 90 bp | AAGCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCTTTGCAGTGTATCTTaGGCTTTCTGCTTGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KQGVQGGHTSHVQVTSPGLCSVS*AFCLLF Trigger: AAAAAGCAAGCAGAAAGCTCAAGATACACTGCAAAG...CCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR CCA 90 bp | CATGTCCAAGATAAAGAAACCCACGAAGAAAAAGTCGTTGTTCCAAAAGGTGTTTTTGCTTTGCTTGCTTaGAGGCACAGCCTTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HVQDKETHEEKVVVPKGVFALLA*RHSLAP Trigger: GGGGGCAAGGCTGTGCCTCCAAGCAAGCAAAGCAAA...AACACCTTTTGGAACAACGACTTTTTCTTCGTGGGTTTCTTTATCTTGGACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR TCA 90 bp | ATTAGCTGTGGAATGGAATCTTCCCCAGCCTGTCACACAAACAGGCGTCTTTTCCTTTGCAGTGTATCTTaGGCTTTCTGCTTGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISCGMESSPACHTNRRLFLCSVS*AFCLLF Trigger: AAAAAGCAAGCAGAAAGCTCAAGATACACTGCAAAG...GAAAAGACGCCTGTTTGTGTGACAGGCTGGGGAAGATTCCATTCCACAGCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR CAA 72 bp | CTCATTAGAACCCAGTACCTTCTACATGACCTTCCATaGTCCCATTCCTACAAAAGAGCCATTTCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LIRTQYLLHDLP*SHSYKRAISGE Trigger: TTCCCCAGAAATGGCTCTTTTGTAGGAATGGGACAATGGAAGGTCATGTAGAAGGTACTGGGTTCTAATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR GCA 90 bp | CACACACACACGAACACTTTACCTTTAAAAATCATGGCCCCATTGGCAGTTATTTTGTCTGCGAGGCTGTaGGCATGCTCAAGAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTNTLPLKIMAPLAVILSARL*ACSRNK Trigger: TTTGTTTCTTGAGCATGCGCACAGCCTCGCAGACAA...AATAACTGCCAATGGGGCCATGATTTTTAAAGGTAAAGTGTTCGTGTGTGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
||
| CDS-3UTR GCA 90 bp | CATAAATTGAGAACCGTAAAAACTGAATGGCCTCATGACCCAATTTCAAACACCTCTTTTTGCTTTGCTTaGTTGGAGGCACAGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HKLRTVKTEWPHDPISNTSFCFA*LEAQPC Trigger: GCAAGGCTGTGCCTCCAAGCAAGCAAAGCAAAAAGA...GGTGTTTGAAATTGGGTCATGAGGCCATTCAGTTTTTACGGTTCTCAATTTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR TCA 90 bp | CACACACACACGAACACTTTACCTTTAAAAATCATGGCCCCATTGGCAGTTATTGTTCATTCTCTTCCTTaGGCTGGTTTACTCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTNTLPLKIMAPLAVIVHSLP*AGLLFA Trigger: TGCAAAGAGTAAACCAGCTCAAGGAAGAGAATGAAC...AATAACTGCCAATGGGGCCATGATTTTTAAAGGTAAAGTGTTCGTGTGTGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
||
| CDS-3UTR TCA 90 bp | CATGTCCAAGATAAAGAAACCCACGAAGAAAAAGTCGTTGTTCCAAAAGGTGTTGTGCCTGAGTATGAATaGCACTTATTCCATTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: HVQDKETHEEKVVVPKGVVPEYE*HLFHSL Trigger: GAGTGAATGGAATAAGTGTCATTCATACTCAGGCAC...AACACCTTTTGGAACAACGACTTTTTCTTCGTGGGTTTCTTTATCTTGGACATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR GCA 90 bp | AGTATGGAACTACTTGCTTGTGCTAACAATCTCTTTTACAAAGGTAAGAGCAAAGCGAGGCTGTGCGCATaGTCAAGAAACAAATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SMELLACANNLFYKGKSKARLCA*SRNKSF Trigger: GAAAGATTTGTTTCTTGAGCATGCGCACAGCCTCGC...TTTGCTCTTACCTTTGTAAAAGAGATTGTTAGCACAAGCAAGTAGTTCCATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR CAA 72 bp | AAATGGTTTCTCCCCCAAACCAAATGCTGCATTTACTaGCGTCCACAGAAACTAAAATGTCAGTACACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KWFLPQTKCCIY*RPQKLKCQYTV Trigger: TACTGTGTACTGACATTTTAGTTTCTGTGGACGCAAGTAAATGCAGCATTTGGTTTGGGGGAGAAACCATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| 3UTR CAA 72 bp | TTTGAGTCCAAACATTTGTGTTCAGTATGGAACTACTaGCTTGTGCTAACAATCTCTTTTACAAAGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FESKHLCSVWNY*LVLTISFTKVR Trigger: TCTTACCTTTGTAAAAGAGATTGTTAGCACAAGCAAGTAGTTCCATACTGAACACAAATGTTTGGACTCAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR CAA 90 bp | GCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCCTTTTGCTTTGCTTGCTaGGAGGCACAGCCTTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ARGAGWSHLSCSSHKPWAFCFAC*EAQPCP Trigger: GGGGCAAGGCTGTGCCTCCAAGCAAGCAAAGCAAAA...GGCCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR CAA 90 bp | CCCGCTGTCCATGCACTCCAGCCCAGGACAACAGCAAGAGGCACCTTGCAGGCTATGGGTGAGCTCTTTTaGCTTTGCTTGCTTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PAVHALQPRTTARGTLQAMGELF*LCLLGG Trigger: GCCTCCAAGCAAGCAAAGCAAAAAGAGCTCACCCAT...AGCCTGCAAGGTGCCTCTTGCTGTTGTCCTGGGCTGGAGTGCATGGACAGCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR CAA 90 bp | GAAGCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGATGGGTGAGCTCTTTTaGCTTTGCTTGCTTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EARGAGWSHLSCSSHKPWMGELF*LCLLGG Trigger: GCCTCCAAGCAAGCAAAGCAAAAAGAGCTCACCCAT...CCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR CAA 90 bp | GCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCCCGTTCATTCTCTTCCTaGAGCTGGTTTACTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARGAGWSHLSCSSHKPWARSFSS*SWFTLC Trigger: GCAAAGAGTAAACCAGCTCAAGGAAGAGAATGAACG...GGCCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR CAA 90 bp | GCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCCGTCAGCAACTTAATTTaGGCTTCCAACCGTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: ARGAGWSHLSCSSHKPWAVSNLI*ASNRSF Trigger: GAATGAACGGTTGGAAGCCAAAATTAAGTTGCTGAC...GGCCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR CAA 90 bp | AGCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGCGAGCTGGTTTACTCTTaGCAGTGTATCTTGAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SKGCRVVTPLMFKSQALGELVYS*QCILSF Trigger: AAAGCTCAAGATACACTGCAAAGAGTAAACCAGCTC...GCCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS GCA 90 bp | CCTGGGTTATCAGAATTTGTCGCTGTAGTTTCCGTGCTGATGGGCTaGACGTTGTCTGCGAGGCTGTGCGCATGCTCAAGAAACAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: PGLSEFVAVVSVLMG*TLSARLCACSRNKS Trigger: AGATTTGTTTCTTGAGCATGCGCACAGCCTCGCAGACAACGTGCAGCCCATCAGCACGGAAACTACAGCGACAAATTCTGATAACCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR CAA 90 bp | AAGCAAGGGGTGCAGGGTGGTCACACCTCTCATGTTCAAGTCACAAGCCCTGGGTCTTTGCAGTGTATCTaGAGCTTTCTGCTTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KQGVQGGHTSHVQVTSPGSLQCI*SFLLAF Trigger: AAAAGCAAGCAGAAAGCTCAAGATACACTGCAAAGA...CCCAGGGCTTGTGACTTGAACATGAGAGGTGTGACCACCCTGCACCCCTTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS GCA 90 bp | GTTTCCGTGCTGATGGGCTGCACGTTGTCTGCGAGGCTGTGCGCATaGTCAAGAAACAAATCTTTCAGTACACTTAATTCCTTTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSVLMGCTLSARLCA*SRNKSFSTLNSFVS Trigger: GCTGACAAAGGAATTAAGTGTACTGAAAGATTTGTTTCTTGAGCATGCGCACAGCCTCGCAGACAACGTGCAGCCCATCAGCACGGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS-3UTR CAA 90 bp | CACCTCCTCAACATGACAGATGGGGTTTCTTTACTTCACCTAAAGTCATTTTTATTTTGCTTTGCTTGCTaGGAGGCACAGCCTTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HLLNMTDGVSLLHLKSFLFCFAC*EAQPCP Trigger: GGGGCAAGGCTGTGCCTCCAAGCAAGCAAAGCAAAA...TAAAAATGACTTTAGGTGAAGTAAAGAAACCCCATCTGTCATGTTGAGGAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR CAA 90 bp | ATTAGCTGTGGAATGGAATCTTCCCCAGCCTGTCACACAAACAGGCGTCTTTTCGTCAGCAACTTAATTTaGGCTTCCAACCGTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: ISCGMESSPACHTNRRLFVSNLI*ASNRSF Trigger: GAATGAACGGTTGGAAGCCAAAATTAAGTTGCTGAC...GAAAAGACGCCTGTTTGTGTGACAGGCTGGGGAAGATTCCATTCCACAGCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR CAA 90 bp | GCCCAAGACCACTTCTTCCTTCCTAAACACACTTTGTATTTTAACCACCTCCTCCGTTCATTCTCTTCCTaGAGCTGGTTTACTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: AQDHFFLPKHTLYFNHLLRSFSS*SWFTLC Trigger: GCAAAGAGTAAACCAGCTCAAGGAAGAGAATGAACG...GAGGAGGTGGTTAAAATACAAAGTGTGTTTAGGAAGGAAGAAGTGGTCTTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS-3UTR CAA 90 bp | GCCCAAGACCACTTCTTCCTTCCTAAACACACTTTGTATTTTAACCACCTCCTCGAGCTGGTTTACTCTTaGCAGTGTATCTTGAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AQDHFFLPKHTLYFNHLLELVYS*QCILSF Trigger: AAAGCTCAAGATACACTGCAAAGAGTAAACCAGCTC...GAGGAGGTGGTTAAAATACAAAGTGTGTTTAGGAAGGAAGAAGTGGTCTTGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130491.3 |
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| CDS GCA 72 bp | ATTCGTCACTATTCCGATCCATGGGTGAGCTCTTTTTaGTTTGCTTGCTTGGAGGCACAGCCTTGCCCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: IRHYSDPWVSSF*FACLEAQPCPL Trigger: GAGGGGGCAAGGCTGTGCCTCCAAGCAAGCAAAGCAAAAAGAGCTCACCCATGGATCGGAATAGTGACGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS GCA 72 bp | TCCGTGCTGATGGGCTGCACGTTGTCTGCGAGGCTGTaGGCATGCTCAAGAAACAAATCTTTCAGTACACTT | + |
|
Preference number: 6 (lower is better) Translates to: SVLMGCTLSARL*ACSRNKSFSTL Trigger: AAGTGTACTGAAAGATTTGTTTCTTGAGCATGCGCACAGCCTCGCAGACAACGTGCAGCCCATCAGCACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
||
| CDS GCA 72 bp | CTGATGGGCTGCACGTTGTCTGCGAGGCTGTGCGCATaGTCAAGAAACAAATCTTTCAGTACACTTAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: LMGCTLSARLCA*SRNKSFSTLNS Trigger: GGAATTAAGTGTACTGAAAGATTTGTTTCTTGAGCATGCGCACAGCCTCGCAGACAACGTGCAGCCCATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS CAA 72 bp | TTCAGTACACTTAATTCCTTTGTCAGCAACTTAATTTaGGCTTCCAACCGTTCATTCTCTTCCTTGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FSTLNSFVSNLI*ASNRSFSSLSW Trigger: CCAGCTCAAGGAAGAGAATGAACGGTTGGAAGCCAAAATTAAGTTGCTGACAAAGGAATTAAGTGTACTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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| CDS CAA 90 bp | AACAAATCTTTCAGTACACTTAATTCCTTTGTCAGCAACTTAATTTaGGCTTCCAACCGTTCATTCTCTTCCTTGAGCTGGTTTACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: NKSFSTLNSFVSNLI*ASNRSFSSLSWFTL Trigger: AAGAGTAAACCAGCTCAAGGAAGAGAATGAACGGTTGGAAGCCAAAATTAAGTTGCTGACAAAGGAATTAAGTGTACTGAAAGATTTGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070191.10 ENSMUST00000130491.3 |
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