Pregenerated sensors for CEBPE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052435Ensembl transcript IDs: ENSMUST00000064290.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCCAATTACTGGCTGCCATTGTCCACGATCTCTGTCTCAGGCTTaGCCTGTTCAGGACTCTGGGGACCTAGAAGGGTGGGCGGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: FPITGCHCPRSLSQA*PVQDSGDLEGWAGP Trigger: GGGCCCCGCCCACCCTTCTAGGTCCCCAGAGTCCTGAACAGGCCAAGCCTGAGACAGAGATCGTGGACAATGGCAGCCAGTAATTGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| 3UTR CAA 90 bp | CTTCCCAATTACTGGCTGCCATTGTCCACGATCTCTGTCTCAGGCTaGGCCTGTTCAGGACTCTGGGGACCTAGAAGGGTGGGCGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LPNYWLPLSTISVSG*ACSGLWGPRRVGGA Trigger: GGCCCCGCCCACCCTTCTAGGTCCCCAGAGTCCTGAACAGGCCAAGCCTGAGACAGAGATCGTGGACAATGGCAGCCAGTAATTGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| 3UTR-3UTR GCA 90 bp | GACCTTCCCAATTACTGGCTGCCATTGTCCACGATCTCTGTCTCAGGCTTGGCCGCCCTTAGGGTCTGGTaGCCACAGTCTGCCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: DLPNYWLPLSTISVSGLAALRVW*PQSARQ Trigger: CTGCCTGGCAGACTGTGGGCACCAGACCCTAAGGGC...GGCCAAGCCTGAGACAGAGATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGAATCATTTGGTCCCGACCTTCCCAATTACTGGCTGCCATTGTCCACGATCGGGGCCCTTAGGGTCTaGTGCCCACAGTCTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: TESFGPDLPNYWLPLSTIGALRV*CPQSAR Trigger: CCTGGCAGACTGTGGGCACCAGACCCTAAGGGCCCC...GATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTCGGGACCAAATGATTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| 3UTR CCA 72 bp | GCTTGGCCTGTTCAGGACTCTGGGGACCTAGAAGGGTaGGCGGGGCCCTTAGGGTCTGGTGCCCACAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: AWPVQDSGDLEG*AGPLGSGAHSL Trigger: CAGACTGTGGGCACCAGACCCTAAGGGCCCCGCCCACCCTTCTAGGTCCCCAGAGTCCTGAACAGGCCAAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| 3UTR CCA 72 bp | ACTGGCTGCCATTGTCCACGATCTCTGTCTCAGGCTTaGCCTGTTCAGGACTCTGGGGACCTAGAAGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: TGCHCPRSLSQA*PVQDSGDLEGW Trigger: CCACCCTTCTAGGTCCCCAGAGTCCTGAACAGGCCAAGCCTGAGACAGAGATCGTGGACAATGGCAGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| 3UTR CCA 72 bp | GCCACAGAATCATTTGGTCCCGACCTTCCCAATTACTaGCTGCCATTGTCCACGATCTCTGTCTCAGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: ATESFGPDLPNY*LPLSTISVSGL Trigger: CAAGCCTGAGACAGAGATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTCGGGACCAAATGATTCTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR CCA 90 bp | GGGGACCTAGAAGGGTGGGCGGGGCCCTTAGGGTCTGGTGCCCACAGTCTGCCAGCAGCCTCAGGGATCTaGCGGAAGAGGTTGCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GDLEGWAGPLGSGAHSLPAASGI*RKRLRR Trigger: TCTGCGCAACCTCTTCCGCCAGATCCCTGAGGCTGC...TGGCAGACTGTGGGCACCAGACCCTAAGGGCCCCGCCCACCCTTCTAGGTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR GCA 90 bp | TGGGGACCTAGAAGGGTGGGCGGGGCCCTTAGGGTCTGGTGCCCACAGTCTGCCTGTTCACTGCCTTCTTaGCCTTGTGTGAGGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: WGPRRVGGALRVWCPQSACSLPS*PCVRGQ Trigger: CTGGCCCCTCACACAAGGGCAAGAAGGCAGTGAACA...GGCAGACTGTGGGCACCAGACCCTAAGGGCCCCGCCCACCCTTCTAGGTCCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR TCA 90 bp | TCTCAGGCTTGGCCTGTTCAGGACTCTGGGGACCTAGAAGGGTGGGCGGGGCCCTCCAGGACCTTCTGCTaGGTCTCCATAATGCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SQAWPVQDSGDLEGWAGPSRTFC*VSIMRL Trigger: GAGGCGCATTATGGAGACTCAGCAGAAGGTCCTGGA...GGGCCCCGCCCACCCTTCTAGGTCCCCAGAGTCCTGAACAGGCCAAGCCTGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR GCA 90 bp | GACCTTCCCAATTACTGGCTGCCATTGTCCACGATCTCTGTCTCAGGCTTGGCCAGCTGCCTCGACTGGTaGCTCGGTTGCCCTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: DLPNYWLPLSTISVSGLASCLDW*LGCPLA Trigger: GGCCAGAGGGCAACCGAGGCACCAGTCGAGGCAGCT...GGCCAAGCCTGAGACAGAGATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR GCA 90 bp | GGTCCCGACCTTCCCAATTACTGGCTGCCATTGTCCACGATCTCTGTCTCAGGCGCCAGCAGGGGAGGGTaGCTTGAGAAGGGGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: GPDLPNYWLPLSTISVSGASRGG*LEKGTA Trigger: TGCAGTCCCCTTCTCAAGGCACCCTCCCCTGCTGGC...GCCTGAGACAGAGATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTCGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR GCA 90 bp | TCCACGATCTCTGTCTCAGGCTTGGCCTGTTCAGGACTCTGGGGACCTAGAAGGGCAGGGGATTGTAGCTaGCTCGACTGGTGCCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: STISVSGLACSGLWGPRRAGDCS*LDWCLG Trigger: ACCGAGGCACCAGTCGAGGCAGCTACAATCCCCTGC...CCTTCTAGGTCCCCAGAGTCCTGAACAGGCCAAGCCTGAGACAGAGATCGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR GCA 90 bp | CCATTGTCCACGATCTCTGTCTCAGGCTTGGCCTGTTCAGGACTCTGGGGACCTTGTCTGCCCGCAGTGTaGCACTTGGTACTGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: PLSTISVSGLACSGLWGPCLPAV*HLVLQG Trigger: CCCCTGCAGTACCAAGTGGCACACTGCGGGCAGACA...AGGTCCCCAGAGTCCTGAACAGGCCAAGCCTGAGACAGAGATCGTGGACAATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR GCA 90 bp | TGTCCACGATCTCTGTCTCAGGCTTGGCCTGTTCAGGACTCTGGGGACCTAGAACGTAGCTCCCTGGGTTaGTGTAGATGCCAGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: CPRSLSQAWPVQDSGDLERSSLG*CRCQAP Trigger: TGGGGCCTGGCATCTACAGCAACCCAGGGAGCTACG...TTCTAGGTCCCCAGAGTCCTGAACAGGCCAAGCCTGAGACAGAGATCGTGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR CCA 90 bp | CCACAGAATCATTTGGTCCCGACCTTCCCAATTACTGGCTGCCATTGTCCACGAGCCTCGGTTGCCCTCTaGCCCACGAGGCTCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: PQNHLVPTFPITGCHCPRASVAL*PTRLLL Trigger: AAGGAGGAGCCTCGTGGGCCAGAGGGCAACCGAGGC...TCGTGGACAATGGCAGCCAGTAATTGGGAAGGTCGGGACCAAATGATTCTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR CCA 90 bp | TGGTCCCGACCTTCCCAATTACTGGCTGCCATTGTCCACGATCTCTGTCTCAGGTGTAGCTGCCTCGACTaGTGCCTCGGTTGCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: WSRPSQLLAAIVHDLCLRCSCLD*CLGCPL Trigger: CAGAGGGCAACCGAGGCACCAGTCGAGGCAGCTACA...CCTGAGACAGAGATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTCGGGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR TCA 90 bp | TGGTCCCGACCTTCCCAATTACTGGCTGCCATTGTCCACGATCTCTGTCTCAGGTGTCTAGCTCCTGAGTaGGCTGGTCTACGCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: WSRPSQLLAAIVHDLCLRCLAPE*AGLRGC Trigger: GCAACCGCGTAGACCAGCTCACTCAGGAGCTAGACA...CCTGAGACAGAGATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTCGGGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR TCA 90 bp | GACCTTCCCAATTACTGGCTGCCATTGTCCACGATCTCTGTCTCAGGCTTGGCCAGAGTGTCTAGCTCCTaGGTGAGCTGGTCTACGCGG | + |
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Preference number: 4 (lower is better) Translates to: DLPNYWLPLSTISVSGLARVSSS*VSWSTR Trigger: CCGCGTAGACCAGCTCACTCAGGAGCTAGACACTCT...GGCCAAGCCTGAGACAGAGATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR TCA 90 bp | GAATCATTTGGTCCCGACCTTCCCAATTACTGGCTGCCATTGTCCACGATCTCTCCCAGCTCGACCCCCTaGGAACTCAAGTGGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: ESFGPDLPNYWLPLSTISPSSTP*ELKWLL Trigger: CAGCAGCCACTTGAGTTCTCAGGGGGTCGAGCTGGG...AGAGATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTCGGGACCAAATGATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR GCA 90 bp | ACAGAATCATTTGGTCCCGACCTTCCCAATTACTGGCTGCCATTGTCCACGATCGAGAACTCAAGTGGCTaGTGGCCACCCCGAGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: TESFGPDLPNYWLPLSTIENSSG*WPPRGS Trigger: CGAGCCTCGGGGTGGCCAGCAGCCACTTGAGTTCTC...GATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTCGGGACCAAATGATTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR GCA 90 bp | CAGAATCATTTGGTCCCGACCTTCCCAATTACTGGCTGCCATTGTCCACGATCTAGGTGCACGGCTGTCTaGCCGCAGTGTGCCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: QNHLVPTFPITGCHCPRSRCTAV*PQCATW Trigger: CCAAGTGGCACACTGCGGGCAGACAGCCGTGCACCT...AGATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTCGGGACCAAATGATTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR GCA 90 bp | CATTGTCCACGATCTCTGTCTCAGGCTTGGCCTGTTCAGGACTCTGGGGACCTATCTGGCGGAAGAGGTTaGGCAGAGTGTCTAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HCPRSLSQAWPVQDSGDLSGGRG*AECLAP Trigger: AGGAGCTAGACACTCTGCGCAACCTCTTCCGCCAGA...TAGGTCCCCAGAGTCCTGAACAGGCCAAGCCTGAGACAGAGATCGTGGACAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR TCA 90 bp | AGTAACAGTGCAGTTTATTCAGCCACAGAATCATTTGGTCCCGACCTTCCCAATCTGCCACAGGGGCCTTaGGGACACGCAAGGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SNSAVYSATESFGPDLPNLPQGP*GHARAG Trigger: GCCAGCCCTTGCGTGTCCTCAAGGCCCCTGTGGCAG...ATTGGGAAGGTCGGGACCAAATGATTCTGTGGCTGAATAAACTGCACTGTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR CCA 90 bp | AATCATTTGGTCCCGACCTTCCCAATTACTGGCTGCCATTGTCCACGATCTCTGGGGGTCGTAGCTCCCTaGGTTGCTGTAGATGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: NHLVPTFPITGCHCPRSLGVVAP*VAVDAR Trigger: CCTGGCATCTACAGCAACCCAGGGAGCTACGACCCC...CAGAGATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTCGGGACCAAATGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR CCA 90 bp | CAGAATCATTTGGTCCCGACCTTCCCAATTACTGGCTGCCATTGTCCACGATCTAGGCGGAGAGGTCGATaGAGGCCTCATGCTCACACA | + |
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Preference number: 4 (lower is better) Translates to: QNHLVPTFPITGCHCPRSRRRGR*RPHAHT Trigger: TGTGTGAGCATGAGGCCTCCATCGACCTCTCCGCCT...AGATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTCGGGACCAAATGATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR CCA 90 bp | TGGTCCCGACCTTCCCAATTACTGGCTGCCATTGTCCACGATCTCTGTCTCAGGCAGGCGTTGGCTTCATaGCAAAGAGGTCAGAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: WSRPSQLLAAIVHDLCLRQALAS*QRGQKV Trigger: TACTTTCTGACCTCTTTGCCATGAAGCCAACGCCTG...CCTGAGACAGAGATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTCGGGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR GCA 90 bp | CATCAAGTAACAGTGCAGTTTATTCAGCCACAGAATCATTTGGTCCCGACCTTCTCGATGGAGGCCTCATaGTCACACATGTCCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HQVTVQFIQPQNHLVPTFSMEAS*SHMSPS Trigger: GCTGGGGGACATGTGTGAGCATGAGGCCTCCATCGA...GAAGGTCGGGACCAAATGATTCTGTGGCTGAATAAACTGCACTGTTACTTGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| 3UTR CAA 72 bp | CAAGTAACAGTGCAGTTTATTCAGCCACAGAATCATTaGGTCCCGACCTTCCCAATTACTGGCTGCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: QVTVQFIQPQNH*VPTFPITGCHC Trigger: ACAATGGCAGCCAGTAATTGGGAAGGTCGGGACCAAATGATTCTGTGGCTGAATAAACTGCACTGTTACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS GCA 90 bp | CTGTCTGCCCGCAGTGTGCCACTTGGTACTGCAGGGGATTGTAGCTaGCTCGACTGGTGCCTCGGTTGCCCTCTGGCCCACGAGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: LSARSVPLGTAGDCS*LDWCLGCPLAHEAP Trigger: AGGAGCCTCGTGGGCCAGAGGGCAACCGAGGCACCAGTCGAGGCAGCTACAATCCCCTGCAGTACCAAGTGGCACACTGCGGGCAGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS CCA 90 bp | ACGAGGCTCCTCCTTCACCGCCACAGCCCTGGGGTCGTAGCTCCCTaGGTTGCTGTAGATGCCAGGCCCCAAAGCCTTCCTATCTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: TRLLLHRHSPGVVAP*VAVDARPQSLPIWA Trigger: GGCCCAGATAGGAAGGCTTTGGGGCCTGGCATCTACAGCAACCCAGGGAGCTACGACCCCAGGGCTGTGGCGGTGAAGGAGGAGCCTCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS CCA 90 bp | CGCAGTGTGCCACTTGGTACTGCAGGGGATTGTAGCTGCCTCGACTaGTGCCTCGGTTGCCCTCTGGCCCACGAGGCTCCTCCTTCACCG | + |
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Preference number: 5 (lower is better) Translates to: RSVPLGTAGDCSCLD*CLGCPLAHEAPPSP Trigger: CGGTGAAGGAGGAGCCTCGTGGGCCAGAGGGCAACCGAGGCACCAGTCGAGGCAGCTACAATCCCCTGCAGTACCAAGTGGCACACTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS GCA 90 bp | AGTGTGCCACTTGGTACTGCAGGGGATTGTAGCTGCCTCGACTGGTaGCTCGGTTGCCCTCTGGCCCACGAGGCTCCTCCTTCACCGCCA | + |
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Preference number: 5 (lower is better) Translates to: SVPLGTAGDCSCLDW*LGCPLAHEAPPSPP Trigger: TGGCGGTGAAGGAGGAGCCTCGTGGGCCAGAGGGCAACCGAGGCACCAGTCGAGGCAGCTACAATCCCCTGCAGTACCAAGTGGCACACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS CCA 90 bp | TGGCCGAGGGTCAGCCGGCAGGTAGTGAGGAAACGAGGGGGCTCCTaGGCCCTTAAGGCTTCGGGCTTCAGGCGTTGGCTTCATGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: WPRVSRQVVRKRGGS*ALKASGFRRWLHGK Trigger: TTTGCCATGAAGCCAACGCCTGAAGCCCGAAGCCTTAAGGGCCCAGGAGCCCCCTCGTTTCCTCACTACCTGCCGGCTGACCCTCGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR CAA 90 bp | CTAGAAGGGTGGGCGGGGCCCTTAGGGTCTGGTGCCCACAGTCTGCCAGGCAGGTTCGGGCTTCAGGCGTaGGCTTCATGGCAAAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: LEGWAGPLGSGAHSLPGRFGLQA*ASWQRG Trigger: ACCTCTTTGCCATGAAGCCAACGCCTGAAGCCCGAA...CCTGCCTGGCAGACTGTGGGCACCAGACCCTAAGGGCCCCGCCCACCCTTCTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR CAA 90 bp | CTAGAAGGGTGGGCGGGGCCCTTAGGGTCTGGTGCCCACAGTCTGCCAGGCAGGTTGCGCACCGCGATGTaGTTACGTTCACGTCGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LEGWAGPLGSGAHSLPGRLRTAM*LRSRRS Trigger: ACTGCGACGTGAACGTAACAACATCGCGGTGCGCAA...CCTGCCTGGCAGACTGTGGGCACCAGACCCTAAGGGCCCCGCCCACCCTTCTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS GCA 90 bp | GCTCCTCCTTCACCGCCACAGCCCTGGGGTCGTAGCTCCCTGGGTTaGTGTAGATGCCAGGCCCCAAAGCCTTCCTATCTGGGCCAAATG | + |
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Preference number: 5 (lower is better) Translates to: APPSPPQPWGRSSLG*CRCQAPKPSYLGQM Trigger: CATTTGGCCCAGATAGGAAGGCTTTGGGGCCTGGCATCTACAGCAACCCAGGGAGCTACGACCCCAGGGCTGTGGCGGTGAAGGAGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS TCA 90 bp | GTAGATGCCAGGCCCCAAAGCCTTCCTATCTGGGCCAAATGTGTGTaGGGGATAGGCGAATGGCCGAGGGTCAGCCGGCAGGTAGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: VDARPQSLPIWAKCV*GIGEWPRVSRQVVR Trigger: CCTCACTACCTGCCGGCTGACCCTCGGCCATTCGCCTATCCCTCACACACATTTGGCCCAGATAGGAAGGCTTTGGGGCCTGGCATCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR CAA 90 bp | CATTGTCCACGATCTCTGTCTCAGGCTTGGCCTGTTCAGGACTCTGGGGACCTAACTGCCTTCTTGCCCTaGTGTGAGGGGCCAGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: HCPRSLSQAWPVQDSGDLTAFLP*CEGPAG Trigger: CCCTGCTGGCCCCTCACACAAGGGCAAGAAGGCAGT...TAGGTCCCCAGAGTCCTGAACAGGCCAAGCCTGAGACAGAGATCGTGGACAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR CAA 90 bp | ACGATCTCTGTCTCAGGCTTGGCCTGTTCAGGACTCTGGGGACCTAGAAGGGTGTCCATAATGCGCCTCTaGGCCTTGTCCCGGCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: TISVSGLACSGLWGPRRVSIMRL*ALSRLL Trigger: CAAGAGCCGGGACAAGGCCAAGAGGCGCATTATGGA...CACCCTTCTAGGTCCCCAGAGTCCTGAACAGGCCAAGCCTGAGACAGAGATCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR CAA 90 bp | TGTCCACGATCTCTGTCTCAGGCTTGGCCTGTTCAGGACTCTGGGGACCTAGAACCCGCAGTGTGCCACTaGGTACTGCAGGGGATTGTA | + |
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Preference number: 5 (lower is better) Translates to: CPRSLSQAWPVQDSGDLEPAVCH*VLQGIV Trigger: TACAATCCCCTGCAGTACCAAGTGGCACACTGCGGG...TTCTAGGTCCCCAGAGTCCTGAACAGGCCAAGCCTGAGACAGAGATCGTGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR CAA 90 bp | AGTAACAGTGCAGTTTATTCAGCCACAGAATCATTTGGTCCCGACCTTCCCAATCGACTGGTGCCTCGGTaGCCCTCTGGCCCACGAGGC | + |
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Preference number: 5 (lower is better) Translates to: SNSAVYSATESFGPDLPNRLVPR*PSGPRG Trigger: GCCTCGTGGGCCAGAGGGCAACCGAGGCACCAGTCG...ATTGGGAAGGTCGGGACCAAATGATTCTGTGGCTGAATAAACTGCACTGTTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR CAA 90 bp | GACCTTCCCAATTACTGGCTGCCATTGTCCACGATCTCTGTCTCAGGCTTGGCCTTGTTCACTGCCTTCTaGCCCTTGTGTGAGGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: DLPNYWLPLSTISVSGLALFTAF*PLCEGP Trigger: TGGCCCCTCACACAAGGGCAAGAAGGCAGTGAACAA...GGCCAAGCCTGAGACAGAGATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR CAA 90 bp | TTTGGTCCCGACCTTCCCAATTACTGGCTGCCATTGTCCACGATCTCTGTCTCAATCTGGCGGAAGAGGTaGCGCAGAGTGTCTAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: FGPDLPNYWLPLSTISVSIWRKR*RRVSSS Trigger: GGAGCTAGACACTCTGCGCAACCTCTTCCGCCAGAT...TGAGACAGAGATCGTGGACAATGGCAGCCAGTAATTGGGAAGGTCGGGACCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS-3UTR CAA 90 bp | CATCAAGTAACAGTGCAGTTTATTCAGCCACAGAATCATTTGGTCCCGACCTTCTACTCCAGGCTATCTTaGTTCACTGCCTTCTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: HQVTVQFIQPQNHLVPTFYSRLS*FTAFLP Trigger: GGGCAAGAAGGCAGTGAACAAAGATAGCCTGGAGTA...GAAGGTCGGGACCAAATGATTCTGTGGCTGAATAAACTGCACTGTTACTTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS GCA 72 bp | GCAGGGGATTGTAGCTGCCTCGACTGGTGCCTCGGTTaGCCTCTGGCCCACGAGGCTCCTCCTTCACCGCCA | + |
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Preference number: 6 (lower is better) Translates to: AGDCSCLDWCLG*PLAHEAPPSPP Trigger: TGGCGGTGAAGGAGGAGCCTCGTGGGCCAGAGGGCAACCGAGGCACCAGTCGAGGCAGCTACAATCCCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS GCA 72 bp | CTTGGTACTGCAGGGGATTGTAGCTGCCTCGACTGGTaGCTCGGTTGCCCTCTGGCCCACGAGGCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LGTAGDCSCLDW*LGCPLAHEAPP Trigger: AGGAGGAGCCTCGTGGGCCAGAGGGCAACCGAGGCACCAGTCGAGGCAGCTACAATCCCCTGCAGTACCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS GCA 72 bp | CGCAGTGTGCCACTTGGTACTGCAGGGGATTGTAGCTaGCTCGACTGGTGCCTCGGTTGCCCTCTGGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: RSVPLGTAGDCS*LDWCLGCPLAH Trigger: GTGGGCCAGAGGGCAACCGAGGCACCAGTCGAGGCAGCTACAATCCCCTGCAGTACCAAGTGGCACACTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS CCA 72 bp | CTCCTTCACCGCCACAGCCCTGGGGTCGTAGCTCCCTaGGTTGCTGTAGATGCCAGGCCCCAAAGCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLHRHSPGVVAP*VAVDARPQSLP Trigger: AGGAAGGCTTTGGGGCCTGGCATCTACAGCAACCCAGGGAGCTACGACCCCAGGGCTGTGGCGGTGAAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS CCA 72 bp | CCACTTGGTACTGCAGGGGATTGTAGCTGCCTCGACTaGTGCCTCGGTTGCCCTCTGGCCCACGAGGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PLGTAGDCSCLD*CLGCPLAHEAP Trigger: AGGAGCCTCGTGGGCCAGAGGGCAACCGAGGCACCAGTCGAGGCAGCTACAATCCCCTGCAGTACCAAGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS CAA 72 bp | GGGGAGGTGCACGGCTGTCTGCCCGCAGTGTGCCACTaGGTACTGCAGGGGATTGTAGCTGCCTCGACTGGT | + |
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Preference number: 6 (lower is better) Translates to: GEVHGCLPAVCH*VLQGIVAASTG Trigger: ACCAGTCGAGGCAGCTACAATCCCCTGCAGTACCAAGTGGCACACTGCGGGCAGACAGCCGTGCACCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS GCA 72 bp | TCACCGCCACAGCCCTGGGGTCGTAGCTCCCTGGGTTaGTGTAGATGCCAGGCCCCAAAGCCTTCCTATCTG | + |
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Preference number: 6 (lower is better) Translates to: SPPQPWGRSSLG*CRCQAPKPSYL Trigger: CAGATAGGAAGGCTTTGGGGCCTGGCATCTACAGCAACCCAGGGAGCTACGACCCCAGGGCTGTGGCGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS TCA 72 bp | AGGCCCCAAAGCCTTCCTATCTGGGCCAAATGTGTGTaGGGGATAGGCGAATGGCCGAGGGTCAGCCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RPQSLPIWAKCV*GIGEWPRVSRQ Trigger: CTGCCGGCTGACCCTCGGCCATTCGCCTATCCCTCACACACATTTGGCCCAGATAGGAAGGCTTTGGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS TCA 72 bp | GGCGGAAGAGGTTGCGCAGAGTGTCTAGCTCCTGAGTaGGCTGGTCTACGCGGTTGCGCAGACGCTCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: GGRGCAECLAPE*AGLRGCADARF Trigger: AAAACGAGCGTCTGCGCAACCGCGTAGACCAGCTCACTCAGGAGCTAGACACTCTGCGCAACCTCTTCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS CAA 72 bp | AGTCGGTACTCCAGGCTATCTTTGTTCACTGCCTTCTaGCCCTTGTGTGAGGGGCCAGCAGGGGAGGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SRYSRLSLFTAF*PLCEGPAGEGA Trigger: GGCACCCTCCCCTGCTGGCCCCTCACACAAGGGCAAGAAGGCAGTGAACAAAGATAGCCTGGAGTACCGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS CAA 90 bp | TCACGTCGCAGTCGGTACTCCAGGCTATCTTTGTTCACTGCCTTCTaGCCCTTGTGTGAGGGGCCAGCAGGGGAGGGTGCCTTGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: SRRSRYSRLSLFTAF*PLCEGPAGEGALRR Trigger: CCTTCTCAAGGCACCCTCCCCTGCTGGCCCCTCACACAAGGGCAAGAAGGCAGTGAACAAAGATAGCCTGGAGTACCGACTGCGACGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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| CDS CAA 72 bp | TTACGTTCACGTCGCAGTCGGTACTCCAGGCTATCTTaGTTCACTGCCTTCTTGCCCTTGTGTGAGGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LRSRRSRYSRLS*FTAFLPLCEGP Trigger: TGGCCCCTCACACAAGGGCAAGAAGGCAGTGAACAAAGATAGCCTGGAGTACCGACTGCGACGTGAACGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064290.8 |
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