Pregenerated sensors for CEBPD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071637Ensembl transcript IDs: ENSMUST00000096232.6
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCATCAACTGGTACCCTCAAGACAAGGCTGTAGCCACAGAAGCCTaGCCAGCCAGGGCTGTTGGCCCAACTTCCTCACAGGCCCTGACT | + |
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Preference number: 1 (lower is better) Translates to: GINWYPQDKAVATEA*PARAVGPTSSQALT Trigger: AGTCAGGGCCTGTGAGGAAGTTGGGCCAACAGCCCTGGCTGGGCAGGCTTCTGTGGCTACAGCCTTGTCTTGAGGGTACCAGTTGATGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR TCA 90 bp | CTACATTCTCTGCCCTCTCCAGCTGTCCAGCTCCTTGGCCGTAGCTaGCCTGAGTTCCTTGTCAGCTGCCCCGTCCAGAGGACAGGCTAT | + |
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Preference number: 1 (lower is better) Translates to: LHSLPSPAVQLLGRS*PEFLVSCPVQRTGY Trigger: ATAGCCTGTCCTCTGGACGGGGCAGCTGACAAGGAACTCAGGTCAGCTACGGCCAAGGAGCTGGACAGCTGGAGAGGGCAGAGAATGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR TCA 90 bp | CATCACTACACAGCAGAGCAGCTGTGTCGTCACCCTGGAAGAGATTaGGCTGCTGAGTACAGAGGGAGCCACTGCTGCTCAGCCTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: HHYTAEQLCRHPGRD*AAEYRGSHCCSASS Trigger: GGAGGAGGCTGAGCAGCAGTGGCTCCCTCTGTACTCAGCAGCTCAATCTCTTCCAGGGTGACGACACAGCTGCTCTGCTGTGTAGTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR TCA 90 bp | AAGCCTGCCCAGCCAGGGCTGTTGGCCCAACTTCCTCACAGGCCCTaGCTGGGCTGGCCAACTTTCCTAACTGAGCTTAAGACATCTCTA | + |
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Preference number: 1 (lower is better) Translates to: KPAQPGLLAQLPHRP*LGWPTFLTELKTSL Trigger: TAGAGATGTCTTAAGCTCAGTTAGGAAAGTTGGCCAGCCCAGTCAGGGCCTGTGAGGAAGTTGGGCCAACAGCCCTGGCTGGGCAGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR TCA 90 bp | CAACGCACCTGGTCGGGTGGCTCCCAGGTGCTTGCTTTTCCCTGGTaGAGTCTCAGTATGTTGTGTGCGGGAGAGAATGAACATAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: QRTWSGGSQVLAFPW*SLSMLCAGENEHRK Trigger: CTTCCTATGTTCATTCTCTCCCGCACACAACATACTGAGACTTCACCAGGGAAAAGCAAGCACCTGGGAGCCACCCGACCAGGTGCGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR CCA 90 bp | AGCACCCAGCACACTCCACACAGGCATTCTCTATACAGTCCACTCTaGGCTTCATTGGCATGGTTCATCTCTGCCCCACTGGGCATCAAC | + |
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Preference number: 1 (lower is better) Translates to: STQHTPHRHSLYSPL*ASLAWFISAPLGIN Trigger: GTTGATGCCCAGTGGGGCAGAGATGAACCATGCCAATGAAGCCCAGAGTGGACTGTATAGAGAATGCCTGTGTGGAGTGTGCTGGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR TCA 90 bp | CTCCCACCCCAAAGCCTTTTCCGTTGGAAGGAAGGCTGCAGCTTATaGAAGGAAGGACCTTTGTCCTGGCTGTGGCATCGTTGTTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: LPPQSLFRWKEGCSL*KEGPLSWLWHRCWE Trigger: TTCCCAACAACGATGCCACAGCCAGGACAAAGGTCCTTCCTTTCATAAGCTGCAGCCTTCCTTCCAACGGAAAAGGCTTTGGGGTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR CCA 90 bp | ACACTCCACACAGGCATTCTCTATACAGTCCACTCTGGGCTTCATTaGCATGGTTCATCTCTGCCCCACTGGGCATCAACTGGTACCCTC | + |
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Preference number: 1 (lower is better) Translates to: TLHTGILYTVHSGLH*HGSSLPHWASTGTL Trigger: GAGGGTACCAGTTGATGCCCAGTGGGGCAGAGATGAACCATGCCAATGAAGCCCAGAGTGGACTGTATAGAGAATGCCTGTGTGGAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR GCA 90 bp | TATGAAGTGGAGAGCGTCCTTGGGAAGGAGATGGGACCTTTACTCTaGTTTGTCCAGTCCATCACTACACAGCAGAGCAGCTGTGTCGTC | + |
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Preference number: 1 (lower is better) Translates to: YEVESVLGKEMGPLL*FVQSITTQQSSCVV Trigger: GACGACACAGCTGCTCTGCTGTGTAGTGATGGACTGGACAAAGCAGAGTAAAGGTCCCATCTCCTTCCCAAGGACGCTCTCCACTTCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR GCA 90 bp | ATGCAAGCCAAAAGCCCAGCCCCCATGGAAGAGCAGTACTTCCTCTaGATATTGTCTTCCAAATCCTGTCCTAGGCCAGTTTATCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: MQAKSPAPMEEQYFL*ILSSKSCPRPVYPG Trigger: GCCTGGATAAACTGGCCTAGGACAGGATTTGGAAGACAATATGCAGAGGAAGTACTGCTCTTCCATGGGGGCTGGGCTTTTGGCTTGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR CCA 90 bp | TGGGGCAAGCACCAGGAAATCCTTTGGCCACAAGTGTTGCTAGATTaGGGAAGTGTCCCCAAAGGAAGTGGGAGACATATGCAAGCCAAA | + |
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Preference number: 1 (lower is better) Translates to: WGKHQEILWPQVLLD*GSVPKGSGRHMQAK Trigger: TTTGGCTTGCATATGTCTCCCACTTCCTTTGGGGACACTTCCCCAATCTAGCAACACTTGTGGCCAAAGGATTTCCTGGTGCTTGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR TCA 90 bp | CAGGGACAGATGCTGCTGCCCAGTACCTGTGTCTGTGTCTGGAGGTaGAAATCTCCCAAGATTAACTATGTGGATAAAACCTCCAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: QGQMLLPSTCVCVWR*KSPKINYVDKTSSH Trigger: GTGACTGGAGGTTTTATCCACATAGTTAATCTTGGGAGATTTTCACCTCCAGACACAGACACAGGTACTGGGCAGCAGCATCTGTCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR CCA 90 bp | TATCACTGCAGAGTTATGAAGTGGAGAGCGTCCTTGGGAAGGAGATaGGACCTTTACTCTGCTTTGTCCAGTCCATCACTACACAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: YHCRVMKWRASLGRR*DLYSALSSPSLHSR Trigger: TCTGCTGTGTAGTGATGGACTGGACAAAGCAGAGTAAAGGTCCCATCTCCTTCCCAAGGACGCTCTCCACTTCATAACTCTGCAGTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR TCA 90 bp | AGGGCTGTTTGCTTTAACCAGAATGCTTCTATCACTGCAGAGTTATaGAGTGGAGAGCGTCCTTGGGAAGGAGATGGGACCTTTACTCTG | + |
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Preference number: 1 (lower is better) Translates to: RAVCFNQNASITAEL*SGERPWEGDGTFTL Trigger: CAGAGTAAAGGTCCCATCTCCTTCCCAAGGACGCTCTCCACTTCATAACTCTGCAGTGATAGAAGCATTCTGGTTAAAGCAAACAGCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR CCA 90 bp | TTGGGCAGGGATTTGAATTACAAACAAAGCTATGTATTTAGACCCTaGAGGGTTTGTGTTTTCTGTACAACAGGCCGTGCAGATCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: LGRDLNYKQSYVFRP*RVCVFCTTGRADQG Trigger: TCCCTGATCTGCACGGCCTGTTGTACAGAAAACACAAACCCTCCAGGGTCTAAATACATAGCTTTGTTTGTAATTCAAATCCCTGCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR TCA 90 bp | AGAAATGTTTACCCCAATGTAACTCAAGAAGAAATGGAATCTAATTaGAGAGGGAAGTCTGGGGCAAGCACCAGGAAATCCTTTGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: RNVYPNVTQEEMESN*RGKSGASTRKSFGH Trigger: GTGGCCAAAGGATTTCCTGGTGCTTGCCCCAGACTTCCCTCTTCAATTAGATTCCATTTCTTCTTGAGTTACATTGGGGTAAACATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR CCA 90 bp | CCTGTGTCTGTGTCTGGAGGTGAAAATCTCCCAAGATTAACTATGTaGATAAAACCTCCAGTCACATTACTAGAGCACAAACAGAAATGT | + |
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Preference number: 1 (lower is better) Translates to: PVSVSGGENLPRLTM*IKPPVTLLEHKQKC Trigger: ACATTTCTGTTTGTGCTCTAGTAATGTGACTGGAGGTTTTATCCACATAGTTAATCTTGGGAGATTTTCACCTCCAGACACAGACACAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR CAA 90 bp | CCTCTCCAGCTGTCCAGCTCCTTGGCCGTAGCTGACCTGAGTTCCTaGTCAGCTGCCCCGTCCAGAGGACAGGCTATAGTGCCCATTGCA | + |
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Preference number: 2 (lower is better) Translates to: PLQLSSSLAVADLSS*SAAPSRGQAIVPIA Trigger: TGCAATGGGCACTATAGCCTGTCCTCTGGACGGGGCAGCTGACAAGGAACTCAGGTCAGCTACGGCCAAGGAGCTGGACAGCTGGAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCCTGCCCAGCCAGGGCTGTTGGCCCAACTTCCTCACAGGCCCTGACTGGGAAGGACCTTTGTCCTaGCTGTGGCATCGTTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: RSLPSQGCWPNFLTGPDWEGPLS*LWHRCW Trigger: CCAACAACGATGCCACAGCCAGGACAAAGGTCCTTC...CCAGTCAGGGCCTGTGAGGAAGTTGGGCCAACAGCCCTGGCTGGGCAGGCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCCTGCCCAGCCAGGGCTGTTGGCCCAACTTCCTCACAGGCCCTGACTGGGAAGGCTGCAGCTTATaGAAGGAAGGACCTTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: RSLPSQGCWPNFLTGPDWEGCSL*KEGPLS Trigger: GGACAAAGGTCCTTCCTTTCATAAGCTGCAGCCTTC...CCAGTCAGGGCCTGTGAGGAAGTTGGGCCAACAGCCCTGGCTGGGCAGGCTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR GCA 90 bp | GGGAGCTGCCAGAGGTGGCACTGTCACCCATACAATGTTGGGTGTGAGGAGAGCTCTCTCGCAGTCCAGTaGCCAAGCTGCAGCTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GSCQRWHCHPYNVGCEESSLAVQ*PSCSFL Trigger: CAGGAAGCTGCAGCTTGGGCACTGGACTGCGAGAGA...GCTCTCCTCACACCCAACATTGTATGGGTGACAGTGCCACCTCTGGCAGCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCCTGCCCAGCCAGGGCTGTTGGCCCAACTTCCTCACAGGCCCTGACTGGCTTGCTTTTCCCTGGTaGAGTCTCAGTATGTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: RSLPSQGCWPNFLTGPDWLAFPW*SLSMLC Trigger: ACACAACATACTGAGACTTCACCAGGGAAAAGCAAG...CCAGTCAGGGCCTGTGAGGAAGTTGGGCCAACAGCCCTGGCTGGGCAGGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR GCA 90 bp | GGGACAGATGCTGCTGCCCAGTACCTGTGTCTGTGTCTGGAGGTGAAAATCTCCCTGTACAACAGGCCGTaGAGATCAGGGAAGGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: GTDAAAQYLCLCLEVKISLYNRP*RSGKGL Trigger: CAACCCCTTCCCTGATCTGCACGGCCTGTTGTACAG...GGAGATTTTCACCTCCAGACACAGACACAGGTACTGGGCAGCAGCATCTGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCCTGCCCAGCCAGGGCTGTTGGCCCAACTTCCTCACAGGCCCTGACTGGCTTTGGGCAGGGATTTaGATTACAAACAAAGCTATG | + |
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Preference number: 2 (lower is better) Translates to: RSLPSQGCWPNFLTGPDWLWAGI*ITNKAM Trigger: CATAGCTTTGTTTGTAATTCAAATCCCTGCCCAAAG...CCAGTCAGGGCCTGTGAGGAAGTTGGGCCAACAGCCCTGGCTGGGCAGGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR TCA 90 bp | GGGACAGATGCTGCTGCCCAGTACCTGTGTCTGTGTCTGGAGGTGAAAATCTCCATCACTGCAGAGTTATaGAGTGGAGAGCGTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: GTDAAAQYLCLCLEVKISITAEL*SGERPW Trigger: CCAAGGACGCTCTCCACTTCATAACTCTGCAGTGAT...GGAGATTTTCACCTCCAGACACAGACACAGGTACTGGGCAGCAGCATCTGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR TCA 90 bp | GGGACAGATGCTGCTGCCCAGTACCTGTGTCTGTGTCTGGAGGTGAAAATCTCCCTGGGATCACACACATaGATTAGTCATGCTTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: GTDAAAQYLCLCLEVKISLGSHT*ISHAFP Trigger: CGGGAAAGCATGACTAATTCATGTGTGTGATCCCAG...GGAGATTTTCACCTCCAGACACAGACACAGGTACTGGGCAGCAGCATCTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR CCA 90 bp | GGGACAGATGCTGCTGCCCAGTACCTGTGTCTGTGTCTGGAGGTGAAAATCTCCTCCTTGGGAAGGAGATaGGACCTTTACTCTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: GTDAAAQYLCLCLEVKISSLGRR*DLYSAL Trigger: CAAAGCAGAGTAAAGGTCCCATCTCCTTCCCAAGGA...GGAGATTTTCACCTCCAGACACAGACACAGGTACTGGGCAGCAGCATCTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR CCA 90 bp | TCCCAACTGATCCTGACGATGACTCTGCAAAACAAAGCACCCAGCACACTCCACAGTGGAGAGCGTCCTTaGGAAGGAGATGGGACCTTT | + |
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Preference number: 2 (lower is better) Translates to: SQLILTMTLQNKAPSTLHSGERP*EGDGTF Trigger: AAAGGTCCCATCTCCTTCCCAAGGACGCTCTCCACT...GTGGAGTGTGCTGGGTGCTTTGTTTTGCAGAGTCATCGTCAGGATCAGTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR CCA 90 bp | TGGCCACAAGTGTTGCTAGATTGGGGAAGTGTCCCCAAAGGAAGTGGGAGACATAAAGCCCAGCCCCCATaGAAGAGCAGTACTTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: WPQVLLDWGSVPKGSGRHKAQPP*KSSTSS Trigger: AGAGGAAGTACTGCTCTTCCATGGGGGCTGGGCTTT...ATGTCTCCCACTTCCTTTGGGGACACTTCCCCAATCTAGCAACACTTGTGGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGCACCCAGCACACTCCACACAGGCATTCTCTATACAGTCCACTCTGGGCTTCAGTCCTCTCTAGGCTaGCCATCACTTCTGCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: KAPSTLHTGILYTVHSGLQSSLG*PSLLQS Trigger: AGACTGCAGAAGTGATGGCCAGCCTAGAGAGGACTG...AAGCCCAGAGTGGACTGTATAGAGAATGCCTGTGTGGAGTGTGCTGGGTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCAGTACTTCCTCTGCATATTGTCTTCCAAATCCTGTCCTAGGCCAGTTTGCTCAGCCTCCTCCCTaGCATCTGTGCGCTTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: KSSTSSAYCLPNPVLGQFAQPPP*HLCAWQ Trigger: TTGCCAAGCGCACAGATGTCAGGGAGGAGGCTGAGC...AAACTGGCCTAGGACAGGATTTGGAAGACAATATGCAGAGGAAGTACTGCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR CCA 90 bp | TCCCAACTGATCCTGACGATGACTCTGCAAAACAAAGCACCCAGCACACTCCACCCTTTGTCCTGGCTGTaGCATCGTTGTTGGGAACAA | + |
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Preference number: 2 (lower is better) Translates to: SQLILTMTLQNKAPSTLHPLSWL*HRCWEQ Trigger: TTGTTCCCAACAACGATGCCACAGCCAGGACAAAGG...GTGGAGTGTGCTGGGTGCTTTGTTTTGCAGAGTCATCGTCAGGATCAGTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR GCA 90 bp | AAAGCACCCAGCACACTCCACACAGGCATTCTCTATACAGTCCACTCTGGGCTTGCTGGCCATCACTTCTaGAGTCTCCTCAAATTTGCA | + |
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Preference number: 2 (lower is better) Translates to: KAPSTLHTGILYTVHSGLAGHHF*SLLKFA Trigger: TGCAAATTTGAGGAGACTGCAGAAGTGATGGCCAGC...AAGCCCAGAGTGGACTGTATAGAGAATGCCTGTGTGGAGTGTGCTGGGTGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCTGCCAGAGGTGGCACTGTCACCCATACAATGTTGGGTGTGAGGAGAGCTATGTATTTAGACCCTaGAGGGTTTGTGTTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: GSCQRWHCHPYNVGCEESYVFRP*RVCVFC Trigger: ACAGAAAACACAAACCCTCCAGGGTCTAAATACATA...GCTCTCCTCACACCCAACATTGTATGGGTGACAGTGCCACCTCTGGCAGCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR CAA 90 bp | CCAGAATGCTTCTATCACTGCAGAGTTATGAAGTGGAGAGCGTCCTaGGGAAGGAGATGGGACCTTTACTCTGCTTTGTCCAGTCCATCA | + |
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Preference number: 2 (lower is better) Translates to: PECFYHCRVMKWRAS*GRRWDLYSALSSPS Trigger: TGATGGACTGGACAAAGCAGAGTAAAGGTCCCATCTCCTTCCCAAGGACGCTCTCCACTTCATAACTCTGCAGTGATAGAAGCATTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGCACCCAGCACACTCCACACAGGCATTCTCTATACAGTCCACTCTGGGCTTCAGGTCAGCCTACTCTaGGATCACACACATGAATTA | + |
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Preference number: 2 (lower is better) Translates to: KAPSTLHTGILYTVHSGLQVSLL*DHTHEL Trigger: TAATTCATGTGTGTGATCCCAGAGTAGGCTGACCTG...AAGCCCAGAGTGGACTGTATAGAGAATGCCTGTGTGGAGTGTGCTGGGTGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR CCA 90 bp | GGGACAGATGCTGCTGCCCAGTACCTGTGTCTGTGTCTGGAGGTGAAAATCTCCAAACATTACAATTACTaGCTTTTGGGGCTGCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: GTDAAAQYLCLCLEVKISKHYNY*LLGLPF Trigger: AAAGGGCAGCCCCAAAAGCCAGTAATTGTAATGTTT...GGAGATTTTCACCTCCAGACACAGACACAGGTACTGGGCAGCAGCATCTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCAGTACTTCCTCTGCATATTGTCTTCCAAATCCTGTCCTAGGCCAGTTTGGGAGCTGCCAGAGGTaGCACTGTCACCCATACAAT | + |
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Preference number: 2 (lower is better) Translates to: KSSTSSAYCLPNPVLGQFGSCQR*HCHPYN Trigger: ATTGTATGGGTGACAGTGCCACCTCTGGCAGCTCCC...AAACTGGCCTAGGACAGGATTTGGAAGACAATATGCAGAGGAAGTACTGCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR GCA 90 bp | GACTCTGCAAAACAAAGCACCCAGCACACTCCACACAGGCATTCTCTATACAGTTCTGTGTCTTCATTTTaGAGCTACTTGGGCTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: DSAKQSTQHTPHRHSLYSSVSSF*SYLGLG Trigger: TCCTAAGCCCAAGTAGCTGCAAAATGAAGACACAGA...ACTGTATAGAGAATGCCTGTGTGGAGTGTGCTGGGTGCTTTGTTTTGCAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGCACCCAGCACACTCCACACAGGCATTCTCTATACAGTCCACTCTGGGCTTACAATTACTGGCTTTTaGGGCTGCCCTTTTTATATA | + |
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Preference number: 2 (lower is better) Translates to: KAPSTLHTGILYTVHSGLTITGF*GCPFYI Trigger: TATATAAAAAGGGCAGCCCCAAAAGCCAGTAATTGT...AAGCCCAGAGTGGACTGTATAGAGAATGCCTGTGTGGAGTGTGCTGGGTGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR TCA 90 bp | TGCAAAGTATTAAGTAAGCTACGTTGGAAAATCGAGTCAGTATATGTCATGCTCCACCCTGGAAGAGATTaGGCTGCTGAGTACAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: CKVLSKLRWKIESVYVMLHPGRD*AAEYRG Trigger: CCCTCTGTACTCAGCAGCTCAATCTCTTCCAGGGTG...GAGCATGACATATACTGACTCGATTTTCCAACGTAGCTTACTTAATACTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCAGTACTTCCTCTGCATATTGTCTTCCAAATCCTGTCCTAGGCCAGTTTCTGTGGCATCGTTGTTaGGAACAAAATGTCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: KSSTSSAYCLPNPVLGQFLWHRC*EQNVQE Trigger: TTCCTGGACATTTTGTTCCCAACAACGATGCCACAG...AAACTGGCCTAGGACAGGATTTGGAAGACAATATGCAGAGGAAGTACTGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR CCA 90 bp | TGCAAAGTATTAAGTAAGCTACGTTGGAAAATCGAGTCAGTATATGTCATGCTCCACTCTGGGCTTCATTaGCATGGTTCATCTCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: CKVLSKLRWKIESVYVMLHSGLH*HGSSLP Trigger: GGGCAGAGATGAACCATGCCAATGAAGCCCAGAGTG...GAGCATGACATATACTGACTCGATTTTCCAACGTAGCTTACTTAATACTTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR CCA 72 bp | GACCGCGAGGAAACGCGTCCATCTCCTTACCCCGTGTaGGCAACGCACCTGGTCGGGTGGCTCCCAGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: DREETRPSPYPV*ATHLVGWLPGA Trigger: AGCACCTGGGAGCCACCCGACCAGGTGCGTTGCCCACACGGGGTAAGGAGATGGACGCGTTTCCTCGCGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR CCA 72 bp | CGCGTCCATCTCCTTACCCCGTGTGGGCAACGCACCTaGTCGGGTGGCTCCCAGGTGCTTGCTTTTCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: RVHLLTPCGQRT*SGGSQVLAFPW Trigger: CCAGGGAAAAGCAAGCACCTGGGAGCCACCCGACCAGGTGCGTTGCCCACACGGGGTAAGGAGATGGACGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR TCA 72 bp | CTGCCCTCTCCAGCTGTCCAGCTCCTTGGCCGTAGCTaGCCTGAGTTCCTTGTCAGCTGCCCCGTCCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: LPSPAVQLLGRS*PEFLVSCPVQR Trigger: CCTCTGGACGGGGCAGCTGACAAGGAACTCAGGTCAGCTACGGCCAAGGAGCTGGACAGCTGGAGAGGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR-3UTR CAA 90 bp | AGAAGCCTGCCCAGCCAGGGCTGTTGGCCCAACTTCCTCACAGGCCCTGACTGGGCTGACCTGAGTTCCTaGTCAGCTGCCCCGTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RSLPSQGCWPNFLTGPDWADLSS*SAAPSR Trigger: TCTGGACGGGGCAGCTGACAAGGAACTCAGGTCAGC...CCAGTCAGGGCCTGTGAGGAAGTTGGGCCAACAGCCCTGGCTGGGCAGGCTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR TCA 72 bp | GCAGCTGTGTCGTCACCCTGGAAGAGATTGAGCTGCTaGGTACAGAGGGAGCCACTGCTGCTCAGCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: AAVSSPWKRLSC*VQREPLLLSLL Trigger: GAGGAGGCTGAGCAGCAGTGGCTCCCTCTGTACTCAGCAGCTCAATCTCTTCCAGGGTGACGACACAGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR TCA 72 bp | CAGCCAGGGCTGTTGGCCCAACTTCCTCACAGGCCCTaGCTGGGCTGGCCAACTTTCCTAACTGAGCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: QPGLLAQLPHRP*LGWPTFLTELK Trigger: CTTAAGCTCAGTTAGGAAAGTTGGCCAGCCCAGTCAGGGCCTGTGAGGAAGTTGGGCCAACAGCCCTGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR TCA 72 bp | ACAGCAGAGCAGCTGTGTCGTCACCCTGGAAGAGATTaGGCTGCTGAGTACAGAGGGAGCCACTGCTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TAEQLCRHPGRD*AAEYRGSHCCS Trigger: TGAGCAGCAGTGGCTCCCTCTGTACTCAGCAGCTCAATCTCTTCCAGGGTGACGACACAGCTGCTCTGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR GCA 72 bp | ACCCTAGGAACCCAAAGCTGTGCTAGCTACATTCTCTaGCCTCTCCAGCTGTCCAGCTCCTTGGCCGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TLGTQSCASYIL*PLQLSSSLAVA Trigger: AGCTACGGCCAAGGAGCTGGACAGCTGGAGAGGGCAGAGAATGTAGCTAGCACAGCTTTGGGTTCCTAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGCCTGCCCAGCCAGGGCTGTTGGCCCAACTTCCTCACAGGCCCTGACTGGATATTCTCTGCTAGATaGTTCTGTAAAGCTTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RSLPSQGCWPNFLTGPDWIFSAR*FCKASA Trigger: GGCTGAAGCTTTACAGAACAATCTAGCAGAGAATAT...CCAGTCAGGGCCTGTGAGGAAGTTGGGCCAACAGCCCTGGCTGGGCAGGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR GCA 72 bp | TACTCCACTGCCCACCTGTCAGAGACCCTGAAGAACTaGAGAGGGCAAAGATCACAGACTCACAGCAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: YSTAHLSETLKN*RGQRSQTHSSP Trigger: TGGACTGCTGTGAGTCTGTGATCTTTGCCCTCTGCAGTTCTTCAGGGTCTCTGACAGGTGGGCAGTGGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR GCA 72 bp | CAGTCCACTCTGGGCTTCATTGGCATGGTTCATCTCTaGCCCACTGGGCATCAACTGGTACCCTCAAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: QSTLGFIGMVHL*PTGHQLVPSRQ Trigger: TTGTCTTGAGGGTACCAGTTGATGCCCAGTGGGGCAGAGATGAACCATGCCAATGAAGCCCAGAGTGGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR CCA 72 bp | AAGAGGGAAGTCTGGGGCAAGCACCAGGAAATCCTTTaGCCACAAGTGTTGCTAGATTGGGGAAGTGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: KREVWGKHQEIL*PQVLLDWGSVP Trigger: GGGGACACTTCCCCAATCTAGCAACACTTGTGGCCAAAGGATTTCCTGGTGCTTGCCCCAGACTTCCCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTGCAAAACAAAGCACCCAGCACACTCCACACAGGCATTCTCTATACAGTGTGGCTCCCAGGTGCTaGCTTTTCCCTGGTGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: DSAKQSTQHTPHRHSLYSVAPRC*LFPGEV Trigger: GACTTCACCAGGGAAAAGCAAGCACCTGGGAGCCAC...ACTGTATAGAGAATGCCTGTGTGGAGTGTGCTGGGTGCTTTGTTTTGCAGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAACTGATCCTGACGATGACTCTGCAAAACAAAGCACCCAGCACACTCCACCACGTTGTCCCTAGATaGAGGAAAGTAGAGGCAACG | + |
|
Preference number: 3 (lower is better) Translates to: SQLILTMTLQNKAPSTLHHVVPR*RKVEAT Trigger: CGTTGCCTCTACTTTCCTCAATCTAGGGACAACGTG...GTGGAGTGTGCTGGGTGCTTTGTTTTGCAGAGTCATCGTCAGGATCAGTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCACCCAGCACACTCCACACAGGCATTCTCTATACAGTCCACTCTGGGCTTGCACCAGGAAATCCTTaGGCCACAAGTGTTGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: KAPSTLHTGILYTVHSGLAPGNP*ATSVAR Trigger: TCTAGCAACACTTGTGGCCAAAGGATTTCCTGGTGC...AAGCCCAGAGTGGACTGTATAGAGAATGCCTGTGTGGAGTGTGCTGGGTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR TCA 72 bp | CAAAGCCTTTTCCGTTGGAAGGAAGGCTGCAGCTTATaGAAGGAAGGACCTTTGTCCTGGCTGTGGCATCGT | + |
|
Preference number: 3 (lower is better) Translates to: QSLFRWKEGCSL*KEGPLSWLWHR Trigger: ACGATGCCACAGCCAGGACAAAGGTCCTTCCTTTCATAAGCTGCAGCCTTCCTTCCAACGGAAAAGGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR GCA 72 bp | ATTAATATAGCTTCTCTCGCAGTCCAGTGCCCAAGCTaGAGCTTCCTGTCGCTCGCAGGTCCCAAAGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: INIASLAVQCPS*SFLSLAGPKET Trigger: AGTTTCTTTGGGACCTGCGAGCGACAGGAAGCTGCAGCTTGGGCACTGGACTGCGAGAGAAGCTATATTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR GCA 72 bp | ACCCTGGAGGGTTTGTGTTTTCTGTACAACAGGCCGTaGAGATCAGGGAAGGGGTTGGAACAACCAGTATCT | + |
|
Preference number: 3 (lower is better) Translates to: TLEGLCFLYNRP*RSGKGLEQPVS Trigger: AGATACTGGTTGTTCCAACCCCTTCCCTGATCTGCACGGCCTGTTGTACAGAAAACACAAACCCTCCAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR CCA 72 bp | GTGGGAGACATATGCAAGCCAAAAGCCCAGCCCCCATaGAAGAGCAGTACTTCCTCTGCATATTGTCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: VGDICKPKAQPP*KSSTSSAYCLP Trigger: TGGAAGACAATATGCAGAGGAAGTACTGCTCTTCCATGGGGGCTGGGCTTTTGGCTTGCATATGTCTCCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR GCA 72 bp | AAAAGCCCAGCCCCCATGGAAGAGCAGTACTTCCTCTaGATATTGTCTTCCAAATCCTGTCCTAGGCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KSPAPMEEQYFL*ILSSKSCPRPV Trigger: AACTGGCCTAGGACAGGATTTGGAAGACAATATGCAGAGGAAGTACTGCTCTTCCATGGGGGCTGGGCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR TCA 72 bp | TGCTTTAACCAGAATGCTTCTATCACTGCAGAGTTATaGAGTGGAGAGCGTCCTTGGGAAGGAGATGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: CFNQNASITAEL*SGERPWEGDGT Trigger: GGTCCCATCTCCTTCCCAAGGACGCTCTCCACTTCATAACTCTGCAGTGATAGAAGCATTCTGGTTAAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR GCA 72 bp | GGGCAAAGATCACAGACTCACAGCAGTCCACAAGCCTaGACTTTGGGCAGGGATTTGAATTACAAACAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: GQRSQTHSSPQA*TLGRDLNYKQS Trigger: GCTTTGTTTGTAATTCAAATCCCTGCCCAAAGTGCAGGCTTGTGGACTGCTGTGAGTCTGTGATCTTTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR CCA 72 bp | TTCTGTACAACAGGCCGTGCAGATCAGGGAAGGGGTTaGAACAACCAGTATCTTAGTAGAAAGGCACATAGC | + |
|
Preference number: 3 (lower is better) Translates to: FCTTGRADQGRG*NNQYLSRKAHS Trigger: GCTATGTGCCTTTCTACTAAGATACTGGTTGTTCCAACCCCTTCCCTGATCTGCACGGCCTGTTGTACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTGCAAAACAAAGCACCCAGCACACTCCACACAGGCATTCTCTATACAGTGACCTTTACTCTGCTTaGTCCAGTCCATCACTACAC | + |
|
Preference number: 3 (lower is better) Translates to: DSAKQSTQHTPHRHSLYSDLYSA*SSPSLH Trigger: GTGTAGTGATGGACTGGACAAAGCAGAGTAAAGGTC...ACTGTATAGAGAATGCCTGTGTGGAGTGTGCTGGGTGCTTTGTTTTGCAGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR CCA 72 bp | AATGTCCAACCTAAACACTTTGTGGTTTTAGTGTTCTaGGAGCTGCCAGAGGTGGCACTGTCACCCATACAA | + |
|
Preference number: 3 (lower is better) Translates to: NVQPKHFVVLVF*ELPEVALSPIQ Trigger: TTGTATGGGTGACAGTGCCACCTCTGGCAGCTCCCAGAACACTAAAACCACAAAGTGTTTAGGTTGGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCACCCAGCACACTCCACACAGGCATTCTCTATACAGTCCACTCTGGGCTTACTTTGGGCAGGGATTaGAATTACAAACAAAGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: KAPSTLHTGILYTVHSGLTLGRD*NYKQSY Trigger: ATAGCTTTGTTTGTAATTCAAATCCCTGCCCAAAGT...AAGCCCAGAGTGGACTGTATAGAGAATGCCTGTGTGGAGTGTGCTGGGTGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR TCA 72 bp | CCAGAGGTGGCACTGTCACCCATACAATGTTGGGTGTaGGGAGAGCTGTATAAAAGAGAAATTTCTGTACCT | + |
|
Preference number: 3 (lower is better) Translates to: PEVALSPIQCWV*GELYKREISVP Trigger: AGGTACAGAAATTTCTCTTTTATACAGCTCTCCTCACACCCAACATTGTATGGGTGACAGTGCCACCTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR TCA 72 bp | ATGCTGCTGCCCAGTACCTGTGTCTGTGTCTGGAGGTaGAAATCTCCCAAGATTAACTATGTGGATAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: MLLPSTCVCVWR*KSPKINYVDKT Trigger: GGTTTTATCCACATAGTTAATCTTGGGAGATTTTCACCTCCAGACACAGACACAGGTACTGGGCAGCAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR GCA 72 bp | TGTTGGGAACAAAATGTCCAGGAACCCAGGGCTGTTTaGTTTAACCAGAATGCTTCTATCACTGCAGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: CWEQNVQEPRAV*FNQNASITAEL Trigger: TAACTCTGCAGTGATAGAAGCATTCTGGTTAAAGCAAACAGCCCTGGGTTCCTGGACATTTTGTTCCCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR CCA 72 bp | GTGTCTGGAGGTGAAAATCTCCCAAGATTAACTATGTaGATAAAACCTCCAGTCACATTACTAGAGCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSGGENLPRLTM*IKPPVTLLEHK Trigger: TTTGTGCTCTAGTAATGTGACTGGAGGTTTTATCCACATAGTTAATCTTGGGAGATTTTCACCTCCAGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR CCA 72 bp | ACCTTGTTTATTTGCAAAGTATTAAGTAAGCTACGTTaGAAAATCGAGTCAGTATATGTCATGCTCACATCC | + |
|
Preference number: 3 (lower is better) Translates to: TLFICKVLSKLR*KIESVYVMLTS Trigger: GGATGTGAGCATGACATATACTGACTCGATTTTCCAACGTAGCTTACTTAATACTTTGCAAATAAACAAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| CDS-3UTR TCA 90 bp | GGGACAGATGCTGCTGCCCAGTACCTGTGTCTGTGTCTGGAGGTGAAAATCTCCGTGGGTGGAGTGGGCTaGGCCGCGGCCGCCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTDAAAQYLCLCLEVKISVGGVG*AAAAKL Trigger: GAGCTTGGCGGCCGCGGCTCAGCCCACTCCACCCAC...GGAGATTTTCACCTCCAGACACAGACACAGGTACTGGGCAGCAGCATCTGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| CDS-3UTR CCA 90 bp | AGAAGCCTGCCCAGCCAGGGCTGTTGGCCCAACTTCCTCACAGGCCCTGACTGGGCGCCGGCCGCTTTGTaGTTGCTGTTGAAGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RSLPSQGCWPNFLTGPDWAPAAL*LLLKRS Trigger: CGACCTCTTCAACAGCAACCACAAAGCGGCCGGCGC...CCAGTCAGGGCCTGTGAGGAAGTTGGGCCAACAGCCCTGGCTGGGCAGGCTTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| CDS-3UTR CCA 90 bp | GGGACAGATGCTGCTGCCCAGTACCTGTGTCTGTGTCTGGAGGTGAAAATCTCCGGCACAGCTCTAGGGTaGGCACGGCGGCCATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTDAAAQYLCLCLEVKISGTALG*ARRPWS Trigger: ACTCCATGGCCGCCGTGCCCACCCTAGAGCTGTGCC...GGAGATTTTCACCTCCAGACACAGACACAGGTACTGGGCAGCAGCATCTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCACCCAGCACACTCCACACAGGCATTCTCTATACAGTCCACTCTGGGCTTGCGAAGTGGGTGGAGTaGGCTGAGCCGCGGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KAPSTLHTGILYTVHSGLAKWVE*AEPRPP Trigger: TGGCGGCCGCGGCTCAGCCCACTCCACCCACTTCGC...AAGCCCAGAGTGGACTGTATAGAGAATGCCTGTGTGGAGTGTGCTGGGTGCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR CAA 72 bp | CTGTCCAGCTCCTTGGCCGTAGCTGACCTGAGTTCCTaGTCAGCTGCCCCGTCCAGAGGACAGGCTATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSSLAVADLSS*SAAPSRGQAIV Trigger: CACTATAGCCTGTCCTCTGGACGGGGCAGCTGACAAGGAACTCAGGTCAGCTACGGCCAAGGAGCTGGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| CDS-3UTR GCA 90 bp | AATCTAATTGAAGAGGGAAGTCTGGGGCAAGCACCAGGAAATCCTTTGGCCACAGCGCACACCGCCACTTaGGCCGGCAGCAGGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NLIEEGSLGQAPGNPLATAHTAT*AGSREP Trigger: GGGCTCCCTGCTGCCGGCGCAAGTGGCGGTGTGCGC...TGTGGCCAAAGGATTTCCTGGTGCTTGCCCCAGACTTCCCTCTTCAATTAGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| CDS-3UTR GCA 90 bp | AATCTAATTGAAGAGGGAAGTCTGGGGCAAGCACCAGGAAATCCTTTGGCCACATTGCGCTCGCGCCGCTaGCGGTACTCCGGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NLIEEGSLGQAPGNPLATLRSRR*RYSGLP Trigger: CGGCAGCCCGGAGTACCGGCAGCGGCGCGAGCGCAA...TGTGGCCAAAGGATTTCCTGGTGCTTGCCCCAGACTTCCCTCTTCAATTAGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| CDS-3UTR GCA 90 bp | GGGACAGATGCTGCTGCCCAGTACCTGTGTCTGTGTCTGGAGGTGAAAATCTCCAAGCTCACCACTGTCTaGGCGCACACCGCCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTDAAAQYLCLCLEVKISKLTTV*AHTATC Trigger: GCAAGTGGCGGTGTGCGCGCAGACAGTGGTGAGCTT...GGAGATTTTCACCTCCAGACACAGACACAGGTACTGGGCAGCAGCATCTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| CDS-3UTR CCA 90 bp | GACTCTGCAAAACAAAGCACCCAGCACACTCCACACAGGCATTCTCTATACAGTCTCCGGCGAAGTGGGTaGAGTGGGCTGAGCCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSAKQSTQHTPHRHSLYSLRRSG*SGLSRG Trigger: GCCGCGGCTCAGCCCACTCCACCCACTTCGCCGGAG...ACTGTATAGAGAATGCCTGTGTGGAGTGTGCTGGGTGCTTTGTTTTGCAGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR CAA 72 bp | GTGGGCAACGCACCTGGTCGGGTGGCTCCCAGGTGCTaGCTTTTCCCTGGTGAAGTCTCAGTATGTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGNAPGRVAPRC*LFPGEVSVCCV Trigger: CACACAACATACTGAGACTTCACCAGGGAAAAGCAAGCACCTGGGAGCCACCCGACCAGGTGCGTTGCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| CDS-3UTR TCA 90 bp | TCCCAACTGATCCTGACGATGACTCTGCAAAACAAAGCACCCAGCACACTCCACAGCTGCTCCACGCGCTaGTGCAGCTTCTCGTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SQLILTMTLQNKAPSTLHSCSTR*CSFSFS Trigger: CGAGAACGAGAAGCTGCATCAGCGCGTGGAGCAGCT...GTGGAGTGTGCTGGGTGCTTTGTTTTGCAGAGTCATCGTCAGGATCAGTTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| CDS-3UTR CCA 90 bp | GACTCTGCAAAACAAAGCACCCAGCACACTCCACACAGGCATTCTCTATACAGTCTTGTCCACCCTGCCTaGCTCGTAGAAGGCCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSAKQSTQHTPHRHSLYSLVHPA*LVEGRG Trigger: CCCGCGGCCTTCTACGAGCCAGGCAGGGTGGACAAG...ACTGTATAGAGAATGCCTGTGTGGAGTGTGCTGGGTGCTTTGTTTTGCAGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCACCCAGCACACTCCACACAGGCATTCTCTATACAGTCCACTCTGGGCTTACATGGCAGGAGTCGTaGAGCCCAGCTCCCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KAPSTLHTGILYTVHSGLTWQES*SPAPPD Trigger: ATCTGGGGGAGCTGGGCTCCACGACTCCTGCCATGT...AAGCCCAGAGTGGACTGTATAGAGAATGCCTGTGTGGAGTGTGCTGGGTGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR CAA 72 bp | CACTGCTGCTCAGCCTCCTCCCTGACATCTGTGCGCTaGGCAAGGGGCTGTGTGTTAACTCAGTGTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HCCSASSLTSVR*ARGCVLTQCFC Trigger: ACAGAAACACTGAGTTAACACACAGCCCCTTGCCAAGCGCACAGATGTCAGGGAGGAGGCTGAGCAGCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| CDS-3UTR GCA 90 bp | AATCTAATTGAAGAGGGAAGTCTGGGGCAAGCACCAGGAAATCCTTTGGCCACAGCTGCATCTCCTGGTTaGGGCGCTTGGCCTTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NLIEEGSLGQAPGNPLATAASPG*GAWPCR Trigger: GCGACAAGGCCAAGCGCCGCAACCAGGAGATGCAGC...TGTGGCCAAAGGATTTCCTGGTGCTTGCCCCAGACTTCCCTCTTCAATTAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR CAA 72 bp | GAAGAGGGAAGTCTGGGGCAAGCACCAGGAAATCCTTaGGCCACAAGTGTTGCTAGATTGGGGAAGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EEGSLGQAPGNP*ATSVARLGKCP Trigger: GGGACACTTCCCCAATCTAGCAACACTTGTGGCCAAAGGATTTCCTGGTGCTTGCCCCAGACTTCCCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR CAA 72 bp | AAAGGAAGGACCTTTGTCCTGGCTGTGGCATCGTTGTaGGGAACAAAATGTCCAGGAACCCAGGGCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KGRTFVLAVASL*GTKCPGTQGCL Trigger: CAAACAGCCCTGGGTTCCTGGACATTTTGTTCCCAACAACGATGCCACAGCCAGGACAAAGGTCCTTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR CAA 72 bp | ATGAAAGGAAGGACCTTTGTCCTGGCTGTGGCATCGTaGTTGGGAACAAAATGTCCAGGAACCCAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MKGRTFVLAVAS*LGTKCPGTQGC Trigger: ACAGCCCTGGGTTCCTGGACATTTTGTTCCCAACAACGATGCCACAGCCAGGACAAAGGTCCTTCCTTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR CAA 72 bp | CCAGCCCCCATGGAAGAGCAGTACTTCCTCTGCATATaGTCTTCCAAATCCTGTCCTAGGCCAGTTTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PAPMEEQYFLCI*SSKSCPRPVYP Trigger: TGGATAAACTGGCCTAGGACAGGATTTGGAAGACAATATGCAGAGGAAGTACTGCTCTTCCATGGGGGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| CDS-3UTR TCA 90 bp | TGTCACCCATACAATGTTGGGTGTGAGGAGAGCTGTATAAAAGAGAAATTTCTGAGTCAATGTAGGCGCTaGAGTCGATGGCGCTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: CHPYNVGCEESCIKEKFLSQCRR*SRWRSR Trigger: ACGAGAGCGCCATCGACTTCAGCGCCTACATTGACT...CAGAAATTTCTCTTTTATACAGCTCTCCTCACACCCAACATTGTATGGGTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
||
| 3UTR CAA 72 bp | AGATCACAGACTCACAGCAGTCCACAAGCCTGCACTTaGGGCAGGGATTTGAATTACAAACAAAGCTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: RSQTHSSPQACT*GRDLNYKQSYV Trigger: TACATAGCTTTGTTTGTAATTCAAATCCCTGCCCAAAGTGCAGGCTTGTGGACTGCTGTGAGTCTGTGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS-3UTR TCA 90 bp | ATGAATATAAAAAGCATGCGCAGTCTCTTCCTCTTATCTACAAAAGTCTGTCGGCTTTGTGGTTGCTGTTaGAGAGGTCGGCGAAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: MNIKSMRSLFLLSTKVCRLCGCC*RGRRRV Trigger: AACTCTTCGCCGACCTCTTCAACAGCAACCACAAAG...CCGACAGACTTTTGTAGATAAGAGGAAGAGACTGCGCATGCTTTTTATATTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| 3UTR CAA 72 bp | TGGTACACATTTTTAAATCTACACGTTGTCCCTAGATaGAGGAAAGTAGAGGCAACGAGGAATCAAGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: WYTFLNLHVVPR*RKVEATRNQVS Trigger: TGAAACTTGATTCCTCGTTGCCTCTACTTTCCTCAATCTAGGGACAACGTGTAGATTTAAAAATGTGTACCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS GCA 90 bp | CGCGCCGCTGCCGGTACTCCGGGCTGCCGCGGTCCGGACCCCTCTTaGCCGCGCCCTTTTCTCGGACTGTGCCGGGCGCGAGGCTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: RAAAGTPGCRGPDPS*PRPFLGLCRARGSA Trigger: GGCCGAGCCTCGCGCCCGGCACAGTCCGAGAAAAGGGCGCGGGCAAGAGGGGTCCGGACCGCGGCAGCCCGGAGTACCGGCAGCGGCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS CCA 90 bp | GAGGCTCGGCCCCGGGCTGCCTCGAGGAGGCTCCGGCGAAGTGGGTaGAGTGGGCTGAGCCGCGGCCGCCAAGCTCACCACTGTCTGCGC | + |
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Preference number: 5 (lower is better) Translates to: EARPRAASRRLRRSG*SGLSRGRQAHHCLR Trigger: GCGCAGACAGTGGTGAGCTTGGCGGCCGCGGCTCAGCCCACTCCACCCACTTCGCCGGAGCCTCCTCGAGGCAGCCCGGGGCCGAGCCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS CCA 90 bp | GCGCGAGGCTCGGCCCCGGGCTGCCTCGAGGAGGCTCCGGCGAAGTaGGTGGAGTGGGCTGAGCCGCGGCCGCCAAGCTCACCACTGTCT | + |
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Preference number: 5 (lower is better) Translates to: ARGSAPGCLEEAPAK*VEWAEPRPPSSPLS Trigger: AGACAGTGGTGAGCTTGGCGGCCGCGGCTCAGCCCACTCCACCCACTTCGCCGGAGCCTCCTCGAGGCAGCCCGGGGCCGAGCCTCGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS CCA 90 bp | TCGGCCCCGGGCTGCCTCGAGGAGGCTCCGGCGAAGTGGGTGGAGTaGGCTGAGCCGCGGCCGCCAAGCTCACCACTGTCTGCGCGCACA | + |
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Preference number: 5 (lower is better) Translates to: SAPGCLEEAPAKWVE*AEPRPPSSPLSART Trigger: TGTGCGCGCAGACAGTGGTGAGCTTGGCGGCCGCGGCTCAGCCCACTCCACCCACTTCGCCGGAGCCTCCTCGAGGCAGCCCGGGGCCGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS TCA 90 bp | GCAGCAGCTCCAGGCCGCCCGCGCCGGCCGCTTTGTGGTTGCTGTTaGAGAGGTCGGCGAAGAGTTCGTCGTGGCACAGCTCTAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: AAAPGRPRRPLCGCC*RGRRRVRRGTALGW Trigger: CCACCCTAGAGCTGTGCCACGACGAACTCTTCGCCGACCTCTTCAACAGCAACCACAAAGCGGCCGGCGCGGGCGGCCTGGAGCTGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS TCA 90 bp | ACAGCTCTAGGGTGGGCACGGCGGCCATGGAGTCAATGTAGGCGCTaGAGTCGATGGCGCTCTCGTCGTCGTACATGGCAGGAGTCGTGG | + |
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Preference number: 5 (lower is better) Translates to: TALGWARRPWSQCRR*SRWRSRRRTWQESW Trigger: CCACGACTCCTGCCATGTACGACGACGAGAGCGCCATCGACTTCAGCGCCTACATTGACTCCATGGCCGCCGTGCCCACCCTAGAGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS-3UTR CAA 90 bp | GTTCTGGGAGCTGCCAGAGGTGGCACTGTCACCCATACAATGTTGGGTGTGAGGCCCGCGCCGGCCGCTTaGTGGTTGCTGTTGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: VLGAARGGTVTHTMLGVRPAPAA*WLLLKR Trigger: CCTCTTCAACAGCAACCACAAAGCGGCCGGCGCGGG...CCTCACACCCAACATTGTATGGGTGACAGTGCCACCTCTGGCAGCTCCCAGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS-3UTR CAA 90 bp | TGGCCACAAGTGTTGCTAGATTGGGGAAGTGTCCCCAAAGGAAGTGGGAGACATCCGGCCGCTTTGTGGTaGCTGTTGAAGAGGTCGGCG | + |
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Preference number: 5 (lower is better) Translates to: WPQVLLDWGSVPKGSGRHPAALW*LLKRSA Trigger: CGCCGACCTCTTCAACAGCAACCACAAAGCGGCCGG...ATGTCTCCCACTTCCTTTGGGGACACTTCCCCAATCTAGCAACACTTGTGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS-3UTR CAA 90 bp | AATCTAATTGAAGAGGGAAGTCTGGGGCAAGCACCAGGAAATCCTTTGGCCACAGCTTTGTGGTTGCTGTaGAAGAGGTCGGCGAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: NLIEEGSLGQAPGNPLATALWLL*KRSAKS Trigger: ACTCTTCGCCGACCTCTTCAACAGCAACCACAAAGC...TGTGGCCAAAGGATTTCCTGGTGCTTGCCCCAGACTTCCCTCTTCAATTAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS-3UTR CAA 90 bp | ATGAATATAAAAAGCATGCGCAGTCTCTTCCTCTTATCTACAAAAGTCTGTCGGGGGCTGGGCAGTTTTTaGAAGAACTGCCGGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: MNIKSMRSLFLLSTKVCRGLGSF*KNCRRP Trigger: TGGCCTCCGGCAGTTCTTCAAAAAACTGCCCAGCCC...CCGACAGACTTTTGTAGATAAGAGGAAGAGACTGCGCATGCTTTTTATATTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS GCA 72 bp | ACAGACCCCACACCCGGGGGTCGCGTAGGGCCGCCCTaGAGCAGCTCCAGGCCGCCCGCGCCGGCCGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: TDPTPGGRVGPP*SSSRPPAPAAL Trigger: CAAAGCGGCCGGCGCGGGCGGCCTGGAGCTGCTGCAGGGCGGCCCTACGCGACCCCCGGGTGTGGGGTCTGT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS CAA 90 bp | AGCCGCGGCCGCCAAGCTCACCACTGTCTGCGCGCACACCGCCACTaGCGCCGGCAGCAGGGAGCCCGGCGCGTCGCCGTCGCCCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SRGRQAHHCLRAHRH*RRQQGARRVAVAPV Trigger: GACTGGGGCGACGGCGACGCGCCGGGCTCCCTGCTGCCGGCGCAAGTGGCGGTGTGCGCGCAGACAGTGGTGAGCTTGGCGGCCGCGGCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS CAA 90 bp | TCGCGCCGCTGCCGGTACTCCGGGCTGCCGCGGTCCGGACCCCTCTaGCCCGCGCCCTTTTCTCGGACTGTGCCGGGCGCGAGGCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: SRRCRYSGLPRSGPL*PAPFSRTVPGARLG Trigger: GCCGAGCCTCGCGCCCGGCACAGTCCGAGAAAAGGGCGCGGGCAAGAGGGGTCCGGACCGCGGCAGCCCGGAGTACCGGCAGCGGCGCGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS GCA 72 bp | GCCGGTACTCCGGGCTGCCGCGGTCCGGACCCCTCTTaGCCGCGCCCTTTTCTCGGACTGTGCCGGGCGCGA | + |
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Preference number: 6 (lower is better) Translates to: AGTPGCRGPDPS*PRPFLGLCRAR Trigger: TCGCGCCCGGCACAGTCCGAGAAAAGGGCGCGGGCAAGAGGGGTCCGGACCGCGGCAGCCCGGAGTACCGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS CCA 72 bp | GGCAGGAGTCGTGGAGCCCAGCTCCCCCAGATCCCCTaGCTCGGGCCCTCGGCCGGGCTTGTCCACCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GRSRGAQLPQIP*LGPSAGLVHPA Trigger: GGCAGGGTGGACAAGCCCGGCCGAGGGCCCGAGCCAGGGGATCTGGGGGAGCTGGGCTCCACGACTCCTGCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS CCA 72 bp | CCCCGGGCTGCCTCGAGGAGGCTCCGGCGAAGTGGGTaGAGTGGGCTGAGCCGCGGCCGCCAAGCTCACCAC | + |
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Preference number: 6 (lower is better) Translates to: PRAASRRLRRSG*SGLSRGRQAHH Trigger: GTGGTGAGCTTGGCGGCCGCGGCTCAGCCCACTCCACCCACTTCGCCGGAGCCTCCTCGAGGCAGCCCGGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS CAA 72 bp | CGCCAAGCTCACCACTGTCTGCGCGCACACCGCCACTaGCGCCGGCAGCAGGGAGCCCGGCGCGTCGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: RQAHHCLRAHRH*RRQQGARRVAV Trigger: GACGGCGACGCGCCGGGCTCCCTGCTGCCGGCGCAAGTGGCGGTGTGCGCGCAGACAGTGGTGAGCTTGGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS CAA 72 bp | TGCCGGTACTCCGGGCTGCCGCGGTCCGGACCCCTCTaGCCCGCGCCCTTTTCTCGGACTGTGCCGGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: CRYSGLPRSGPL*PAPFSRTVPGA Trigger: CGCGCCCGGCACAGTCCGAGAAAAGGGCGCGGGCAAGAGGGGTCCGGACCGCGGCAGCCCGGAGTACCGGCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS CAA 90 bp | CAGTCGGCGCCGGTGGGCGGCAGGAAAGGCGGGCTGGGCAGTTTTTaGAAGAACTGCCGGAGGCCAGCCAGGTCCCGGGTGAGCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QSAPVGGRKGGLGSF*KNCRRPARSRVSCS Trigger: GGAGCAGCTCACCCGGGACCTGGCTGGCCTCCGGCAGTTCTTCAAAAAACTGCCCAGCCCGCCTTTCCTGCCGCCCACCGGCGCCGACTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS CAA 72 bp | CCGGTGGGCGGCAGGAAAGGCGGGCTGGGCAGTTTTTaGAAGAACTGCCGGAGGCCAGCCAGGTCCCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PVGGRKGGLGSF*KNCRRPARSRV Trigger: CACCCGGGACCTGGCTGGCCTCCGGCAGTTCTTCAAAAAACTGCCCAGCCCGCCTTTCCTGCCGCCCACCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS TCA 72 bp | CCAGGCCGCCCGCGCCGGCCGCTTTGTGGTTGCTGTTaGAGAGGTCGGCGAAGAGTTCGTCGTGGCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: PGRPRRPLCGCC*RGRRRVRRGTA Trigger: AGCTGTGCCACGACGAACTCTTCGCCGACCTCTTCAACAGCAACCACAAAGCGGCCGGCGCGGGCGGCCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS CAA 72 bp | TCCAGGCCGCCCGCGCCGGCCGCTTTGTGGTTGCTGTaGAAGAGGTCGGCGAAGAGTTCGTCGTGGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: SRPPAPAALWLL*KRSAKSSSWHS Trigger: GCTGTGCCACGACGAACTCTTCGCCGACCTCTTCAACAGCAACCACAAAGCGGCCGGCGCGGGCGGCCTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS CAA 90 bp | TGCAGCAGCTCCAGGCCGCCCGCGCCGGCCGCTTTGTGGTTGCTGTaGAAGAGGTCGGCGAAGAGTTCGTCGTGGCACAGCTCTAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: CSSSRPPAPAALWLL*KRSAKSSSWHSSRV Trigger: CACCCTAGAGCTGTGCCACGACGAACTCTTCGCCGACCTCTTCAACAGCAACCACAAAGCGGCCGGCGCGGGCGGCCTGGAGCTGCTGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS TCA 72 bp | GGGTGGGCACGGCGGCCATGGAGTCAATGTAGGCGCTaGAGTCGATGGCGCTCTCGTCGTCGTACATGGCAG | + |
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Preference number: 6 (lower is better) Translates to: GWARRPWSQCRR*SRWRSRRRTWQ Trigger: CTGCCATGTACGACGACGAGAGCGCCATCGACTTCAGCGCCTACATTGACTCCATGGCCGCCGTGCCCACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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| CDS CCA 72 bp | TGGTTGCTGTTGAAGAGGTCGGCGAAGAGTTCGTCGTaGCACAGCTCTAGGGTGGGCACGGCGGCCATGGAG | + |
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Preference number: 6 (lower is better) Translates to: WLLLKRSAKSSS*HSSRVGTAAME Trigger: CTCCATGGCCGCCGTGCCCACCCTAGAGCTGTGCCACGACGAACTCTTCGCCGACCTCTTCAACAGCAACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096232.6 |
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