Pregenerated sensors for CEBPA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034957Ensembl transcript IDs: ENSMUST00000042985.11, ENSMUST00000205391.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACGCGCAGTTGCCCATGGCCTTGACCAAGGAGCTCTCAGGCAGCTaGCGGAAGATGCCCCGCAGCGTGTCCAGTTCACGGCTCAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: HAQLPMALTKELSGS*RKMPRSVSSSRLSC Trigger: ACAGCTGAGCCGTGAACTGGACACGCTGCGGGGCATCTTCCGCCAGCTGCCTGAGAGCTCCTTGGTCAAGGCCATGGGCAACTGCGCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205391.2 |
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| 3UTR TCA 90 bp | GCTCCGCGGAAAGTCTCTCGGTCTCAAGGAGAAACCACCACGGCCTaGCTCCCTCATCTTAGACGCACCGAGTCCGGCTCAGAGGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: APRKVSRSQGETTTA*LPHLRRTESGSEEG Trigger: CCCTTCCTCTGAGCCGGACTCGGTGCGTCTAAGATGAGGGAGTCAGGCCGTGGTGGTTTCTCCTTGAGACCGAGAGACTTTCCGCGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR GCA 90 bp | CAGCTCAGGGCACTGCCGGGATCTCAGCTTCCTGTATCTTCCTCCTaGCCTGGGCCTGCACCCTTCATTTTTCTCACGGGGCCAGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: QLRALPGSQLPVSSS*PGPAPFIFLTGPAE Trigger: CTCAGCTGGCCCCGTGAGAAAAATGAAGGGTGCAGGCCCAGGGCAGGAGGAAGATACAGGAAGCTGAGATCCCGGCAGTGCCCTGAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR CCA 90 bp | CCACCCCACAAAGCCCAGAAACCTAGGTCTCTGTCTCCTACCACATaGCTAACTCACAACTCAGCTTTCTGGTCTGACTGGGGGTGGTGC | + |
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Preference number: 1 (lower is better) Translates to: PPHKAQKPRSLSPTT*LTHNSAFWSDWGWC Trigger: GCACCACCCCCAGTCAGACCAGAAAGCTGAGTTGTGAGTTAGCCATGTGGTAGGAGACAGAGACCTAGGTTTCTGGGCTTTGTGGGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR TCA 90 bp | CATTGCACAAGGCACCGCTGGGACACAGAGACCAGATACAAGTGTTaGTATCGGATGATAAAGCAAAATATTTGGGAAGCTTGTCATAAC | + |
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Preference number: 1 (lower is better) Translates to: HCTRHRWDTETRYKC*YRMIKQNIWEACHN Trigger: GTTATGACAAGCTTCCCAAATATTTTGCTTTATCATCCGATATCAACACTTGTATCTGGTCTCTGTGTCCCAGCGGTGCCTTGTGCAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR CAA 90 bp | GGGGCCGGCCCAAGGCGGTCCCGCAGCCGCGCGCCTCACGCGCAGTaGCCCATGGCCTTGACCAAGGAGCTCTCAGGCAGCTGGCGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GAGPRRSRSRAPHAQ*PMALTKELSGSWRK Trigger: CTTCCGCCAGCTGCCTGAGAGCTCCTTGGTCAAGGCCATGGGCAACTGCGCGTGAGGCGCGCGGCTGCGGGACCGCCTTGGGCCGGCCCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205391.2 |
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| 3UTR CAA 90 bp | AGGCGGTCCCGCAGCCGCGCGCCTCACGCGCAGTTGCCCATGGCCTaGACCAAGGAGCTCTCAGGCAGCTGGCGGAAGATGCCCCGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RRSRSRAPHAQLPMA*TKELSGSWRKMPRS Trigger: GCTGCGGGGCATCTTCCGCCAGCTGCCTGAGAGCTCCTTGGTCAAGGCCATGGGCAACTGCGCGTGAGGCGCGCGGCTGCGGGACCGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205391.2 |
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| 3UTR CAA 90 bp | AGCAGGCCAGGCTTTCAGGCCACACCGGAATCTCCTAGTCCTGGCTaGCGCGGCCCGGGCAGCCTAGAGATCCAGCGACCCGAAACCATC | + |
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Preference number: 2 (lower is better) Translates to: SRPGFQATPESPSPG*RGPGSLEIQRPETI Trigger: GATGGTTTCGGGTCGCTGGATCTCTAGGCTGCCCGGGCCGCGCAAGCCAGGACTAGGAGATTCCGGTGTGGCCTGAAAGCCTGGCCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCTGGGCCTGCACCCTTCATTTTTCTCACGGGGCCAGCTGAGGCCCGAGAGGGAAACCACCACGGCCTaGCTCCCTCATCTTAGACGC | + |
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Preference number: 2 (lower is better) Translates to: ALGLHPSFFSRGQLRPERETTTA*LPHLRR Trigger: GCGTCTAAGATGAGGGAGTCAGGCCGTGGTGGTTTC...CCTCTCGGGCCTCAGCTGGCCCCGTGAGAAAAATGAAGGGTGCAGGCCCAGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGCCACAGGGGTGTGTGTATGAACTGGCTGGAGGTGGCCTTCTTTCCAGATCTCACGGGGCCAGCTaGGGCCCGAGAGGAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SQPQGCVYELAGGGLLSRSHGAS*GPRGSR Trigger: CCTGCTTCCTCTCGGGCCTCAGCTGGCCCCGTGAGA...TCTGGAAAGAAGGCCACCTCCAGCCAGTTCATACACACACCCCTGTGGCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR GCA 90 bp | AGCATAGACGTGCACACTGCCATTGCACAAGGCACCGCTGGGACACAGAGACCACCTGTATCTTCCTCCTaGCCTGGGCCTGCACCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SIDVHTAIAQGTAGTQRPPVSSS*PGPAPF Trigger: GAAGGGTGCAGGCCCAGGGCAGGAGGAAGATACAGG...TGGTCTCTGTGTCCCAGCGGTGCCTTGTGCAATGGCAGTGTGCACGTCTATGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR GCA 90 bp | AGCATAGACGTGCACACTGCCATTGCACAAGGCACCGCTGGGACACAGAGACCAGCTGTTCCACCCGCTTaGGCAGGCGGTCATTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: SIDVHTAIAQGTAGTQRPAVPPA*AGGHCH Trigger: GTGACAATGACCGCCTGCGCAAGCGGGTGGAACAGC...TGGTCTCTGTGTCCCAGCGGTGCCTTGTGCAATGGCAGTGTGCACGTCTATGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205391.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGAGGTGGCCTTCTTTCCAGACCCAGAGCCAGGGCCGTTGGGGATGGGGTGGGATGGATCGATTGTaGTTCAAGTTCCTTCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: GWRWPSFQTQSQGRWGWGGMDRL*FKFLQQ Trigger: TTGCTGAAGGAACTTGAAGCACAATCGATCCATCCC...ACCCCATCCCCAACGGCCCTGGCTCTGGGTCTGGAAAGAAGGCCACCTCCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCAGCAACAGCGGCTGGCGACATACAGTACACACAAGGCTAATGGTCCCCTCTAAAGACAGGGACTaGGGGGCAGCTCAGGGCACT | + |
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Preference number: 2 (lower is better) Translates to: SFSNSGWRHTVHTRLMVPSKDRD*GAAQGT Trigger: AGTGCCCTGAGCTGCCCCTCAGTCCCTGTCTTTAGA...GGGGACCATTAGCCTTGTGTGTACTGTATGTCGCCAGCCGCTGTTGCTGAAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR TCA 90 bp | ATACACCCTTGGACAACTAGGGGAGAGGGGGAAGCCCACTTCATTTCATTGGTCGAAACCACCACGGCCTaGCTCCCTCATCTTAGACGC | + |
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Preference number: 2 (lower is better) Translates to: IHPWTTRGEGEAHFISLVETTTA*LPHLRR Trigger: GCGTCTAAGATGAGGGAGTCAGGCCGTGGTGGTTTC...GACCAATGAAATGAAGTGGGCTTCCCCCTCTCCCCTAGTTGTCCAAGGGTGTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGAGGCCCGAGAGGAAGCAGGAATCCTCCAAATAAAATATCAAGGCACATTTCCCGAAACCATCCTCTaGGTCTCCAGCCAGGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: AEAREEAGILQIKYQGTFPETIL*VSSQGA Trigger: GGCCCCCTGGCTGGAGACCCAGAGGATGGTTTCGGG...AAATGTGCCTTGATATTTTATTTGGAGGATTCCTGCTTCCTCTCGGGCCTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCCGTTAGTGAAGAGTCTCAGTTTGGCAAGAATCAGAGCAAAACCAAAACAATCTCACGGGGCCAGCTaGGGCCCGAGAGGAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: QPLVKSLSLARIRAKPKQSHGAS*GPRGSR Trigger: CCTGCTTCCTCTCGGGCCTCAGCTGGCCCCGTGAGA...TTGTTTTGGTTTTGCTCTGATTCTTGCCAAACTGAGACTCTTCACTAACGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCACAAGGCACCGCTGGGACACAGAGACCAGATACAAGTGTTGATATCGGATCCCTGTAGCTGGGGGTaGGGACACAGACTCAAATCC | + |
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Preference number: 2 (lower is better) Translates to: LHKAPLGHRDQIQVLISDPCSWG*GHRLKS Trigger: GGATTTGAGTCTGTGTCCTCACCCCCAGCTACAGGG...ATCCGATATCAACACTTGTATCTGGTCTCTGTGTCCCAGCGGTGCCTTGTGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR TCA 90 bp | CATAACTCCAGTCCCTCTGGGATGGATCGATTGTGCTTCAAGTTCCTTCAGCAACCCTGTAGCTGGGGGTaGGGACACAGACTCAAATCC | + |
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Preference number: 2 (lower is better) Translates to: HNSSPSGMDRLCFKFLQQPCSWG*GHRLKS Trigger: GGATTTGAGTCTGTGTCCTCACCCCCAGCTACAGGG...TTGCTGAAGGAACTTGAAGCACAATCGATCCATCCCAGAGGGACTGGAGTTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGCCACAGGGGTGTGTGTATGAACTGGCTGGAGGTGGCCTTCTTTCCAGAGGGATGGATCGATTGTaGTTCAAGTTCCTTCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: SQPQGCVYELAGGGLLSRGMDRL*FKFLQQ Trigger: TTGCTGAAGGAACTTGAAGCACAATCGATCCATCCC...TCTGGAAAGAAGGCCACCTCCAGCCAGTTCATACACACACCCCTGTGGCTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR CAA 90 bp | ATTTGGGAAGCTTGTCATAACTCCAGTCCCTCTGGGATGGATCGATaGTGCTTCAAGTTCCTTCAGCAACAGCGGCTGGCGACATACAGT | + |
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Preference number: 2 (lower is better) Translates to: IWEACHNSSPSGMDR*CFKFLQQQRLATYS Trigger: ACTGTATGTCGCCAGCCGCTGTTGCTGAAGGAACTTGAAGCACAATCGATCCATCCCAGAGGGACTGGAGTTATGACAAGCTTCCCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTCCTTCAGCAACAGCGGCTGGCGACATACAGTACACACAAGGCTAATGGTCATCAAGGCACATTTTTaGTCCCCCTACTCGGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: SSFSNSGWRHTVHTRLMVIKAHF*SPYSVG Trigger: TCCTACCGAGTAGGGGGAGCAAAAATGTGCCTTGAT...GACCATTAGCCTTGTGTGTACTGTATGTCGCCAGCCGCTGTTGCTGAAGGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGCCACAGGGGTGTGTGTATGAACTGGCTGGAGGTGGCCTTCTTTCCAGAACCAGATACAAGTGTTaGTATCGGATGATAAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: SQPQGCVYELAGGGLLSRTRYKC*YRMIKQ Trigger: TTGCTTTATCATCCGATATCAACACTTGTATCTGGT...TCTGGAAAGAAGGCCACCTCCAGCCAGTTCATACACACACCCCTGTGGCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGACAACTAGGGGAGAGGGGGAAGCCCACTTCATTTCATTGGTCCTCTGGGACCAAATAAAATGGTaGTTTAGCATAGACGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: PWTTRGEGEAHFISLVLWDQIKW*FSIDVH Trigger: GTGCACGTCTATGCTAAACCACCATTTTATTTGGTC...CCAGAGGACCAATGAAATGAAGTGGGCTTCCCCCTCTCCCCTAGTTGTCCAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR CCA 72 bp | GGCAGCCTAGAGATCCAGCGACCCGAAACCATCCTCTaGGTCTCCAGCCAGGGGGCCGGCCCAAGGCGGTCC | + |
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Preference number: 3 (lower is better) Translates to: GSLEIQRPETIL*VSSQGAGPRRS Trigger: GGACCGCCTTGGGCCGGCCCCCTGGCTGGAGACCCAGAGGATGGTTTCGGGTCGCTGGATCTCTAGGCTGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCTGGGCCTGCACCCTTCATTTTTCTCACGGGGCCAGCTGAGGCCCGAGAGGTCTCCTAGTCCTGGCTaGCGCGGCCCGGGCAGCCTA | + |
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Preference number: 3 (lower is better) Translates to: ALGLHPSFFSRGQLRPERSPSPG*RGPGSL Trigger: TAGGCTGCCCGGGCCGCGCAAGCCAGGACTAGGAGA...CCTCTCGGGCCTCAGCTGGCCCCGTGAGAAAAATGAAGGGTGCAGGCCCAGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR CCA 72 bp | TTGCCCATGGCCTTGACCAAGGAGCTCTCAGGCAGCTaGCGGAAGATGCCCCGCAGCGTGTCCAGTTCACGG | + |
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Preference number: 3 (lower is better) Translates to: LPMALTKELSGS*RKMPRSVSSSR Trigger: CCGTGAACTGGACACGCTGCGGGGCATCTTCCGCCAGCTGCCTGAGAGCTCCTTGGTCAAGGCCATGGGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205391.2 |
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| 3UTR-3UTR CAA 90 bp | GGCCCCCAGCTCAGCTCCGCGGAAAGTCTCTCGGTCTCAAGGAGAAACCACCACCAGTTGCCCATGGCCTaGACCAAGGAGCTCTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: GPQLSSAESLSVSRRNHHQLPMA*TKELSG Trigger: GCCTGAGAGCTCCTTGGTCAAGGCCATGGGCAACTG...GTGGTGGTTTCTCCTTGAGACCGAGAGACTTTCCGCGGAGCTGAGCTGGGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205391.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTGGACAACTAGGGGAGAGGGGGAAGCCCACTTCATTTCATTGGTCCTCTGGTCTCCTAGTCCTGGCTaGCGCGGCCCGGGCAGCCTA | + |
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Preference number: 3 (lower is better) Translates to: PWTTRGEGEAHFISLVLWSPSPG*RGPGSL Trigger: TAGGCTGCCCGGGCCGCGCAAGCCAGGACTAGGAGA...CCAGAGGACCAATGAAATGAAGTGGGCTTCCCCCTCTCCCCTAGTTGTCCAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR TCA 72 bp | CCAACACCTAAGTCCCTCCCCTCTAAAGACAGGGACTaGGGGGCAGCTCAGGGCACTGCCGGGATCTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: PTPKSLPSKDRD*GAAQGTAGISA Trigger: AGCTGAGATCCCGGCAGTGCCCTGAGCTGCCCCTCAGTCCCTGTCTTTAGAGGGGAGGGACTTAGGTGTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR GCA 72 bp | GCACTGCCGGGATCTCAGCTTCCTGTATCTTCCTCCTaGCCTGGGCCTGCACCCTTCATTTTTCTCACGGGG | + |
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Preference number: 3 (lower is better) Translates to: ALPGSQLPVSSS*PGPAPFIFLTG Trigger: CCCCGTGAGAAAAATGAAGGGTGCAGGCCCAGGGCAGGAGGAAGATACAGGAAGCTGAGATCCCGGCAGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR TCA 72 bp | GGGATTAGGAGCCCTCCACCTCCCTGTAGCTGGGGGTaGGGACACAGACTCAAATCCCCAACACCTAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: GIRSPPPPCSWG*GHRLKSPTPKS Trigger: GGACTTAGGTGTTGGGGATTTGAGTCTGTGTCCTCACCCCCAGCTACAGGGAGGTGGAGGGCTCCTAATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR TCA 72 bp | AAAGTCTCTCGGTCTCAAGGAGAAACCACCACGGCCTaGCTCCCTCATCTTAGACGCACCGAGTCCGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: KVSRSQGETTTA*LPHLRRTESGS Trigger: TGAGCCGGACTCGGTGCGTCTAAGATGAGGGAGTCAGGCCGTGGTGGTTTCTCCTTGAGACCGAGAGACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR TCA 72 bp | TTCTGGTCTGACTGGGGGTGGTGCCCCCATTCTCCATaGACTCACCCAGGAAACCTGGCCTGTTGTAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: FWSDWGWCPHSP*THPGNLACCKL Trigger: CAGCTTACAACAGGCCAGGTTTCCTGGGTGAGTTCATGGAGAATGGGGGCACCACCCCCAGTCAGACCAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR CAA 90 bp | CTCACAACTCAGCTTTCTGGTCTGACTGGGGGTGGTGCCCCCATTCTCCATGAATATCAAGGCACATTTTaGCTCCCCCTACTCGGTAGG | + |
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Preference number: 3 (lower is better) Translates to: LTTQLSGLTGGGAPILHEYQGTF*LPLLGR Trigger: CCTACCGAGTAGGGGGAGCAAAAATGTGCCTTGATA...TTCATGGAGAATGGGGGCACCACCCCCAGTCAGACCAGAAAGCTGAGTTGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR TCA 72 bp | TACCACATGGCTAACTCACAACTCAGCTTTCTGGTCTaGCTGGGGGTGGTGCCCCCATTCTCCATGAACTCA | + |
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Preference number: 3 (lower is better) Translates to: YHMANSQLSFLV*LGVVPPFSMNS Trigger: TGAGTTCATGGAGAATGGGGGCACCACCCCCAGTCAGACCAGAAAGCTGAGTTGTGAGTTAGCCATGTGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGCACCGCTGGGACACAGAGACCAGATACAAGTGTTGATATCGGATGATAAAACGTGCACACTGCCATaGCACAAGGCACCGCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: KAPLGHRDQIQVLISDDKTCTLP*HKAPLG Trigger: TCCCAGCGGTGCCTTGTGCAATGGCAGTGTGCACGT...TTTATCATCCGATATCAACACTTGTATCTGGTCTCTGTGTCCCAGCGGTGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR-3UTR CAA 90 bp | GACCAGATACAAGTGTTGATATCGGATGATAAAGCAAAATATTTGGGAAGCTTGGCGCCTCACGCGCAGTaGCCCATGGCCTTGACCAAG | + |
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Preference number: 3 (lower is better) Translates to: DQIQVLISDDKAKYLGSLAPHAQ*PMALTK Trigger: CTTGGTCAAGGCCATGGGCAACTGCGCGTGAGGCGC...CAAGCTTCCCAAATATTTTGCTTTATCATCCGATATCAACACTTGTATCTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205391.2 |
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| 3UTR TCA 72 bp | AGGCACCGCTGGGACACAGAGACCAGATACAAGTGTTaGTATCGGATGATAAAGCAAAATATTTGGGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: RHRWDTETRYKC*YRMIKQNIWEA Trigger: AGCTTCCCAAATATTTTGCTTTATCATCCGATATCAACACTTGTATCTGGTCTCTGTGTCCCAGCGGTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR CAA 72 bp | CCAAGGCGGTCCCGCAGCCGCGCGCCTCACGCGCAGTaGCCCATGGCCTTGACCAAGGAGCTCTCAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PRRSRSRAPHAQ*PMALTKELSGS Trigger: GCTGCCTGAGAGCTCCTTGGTCAAGGCCATGGGCAACTGCGCGTGAGGCGCGCGGCTGCGGGACCGCCTTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205391.2 |
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| CDS-3UTR GCA 90 bp | GACCCGAAACCATCCTCTGGGTCTCCAGCCAGGGGGCCGGCCCAAGGCGGTCCCGTGGGGTGGCCAGGCTaGAGGTGCATGGTGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: DPKPSSGSPARGPAQGGPVGWPG*RCMVVW Trigger: CCAGACCACCATGCACCTGCAGCCTGGCCACCCCAC...GGGACCGCCTTGGGCCGGCCCCCTGGCTGGAGACCCAGAGGATGGTTTCGGGTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR CCA 90 bp | TCCTGCCCTGGGCCTGCACCCTTCATTTTTCTCACGGGGCCAGCTGAGGCCCGAGGCGGCGGTGTGGGGTaGCCAGGCTGCAGGTGCATG | + |
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Preference number: 4 (lower is better) Translates to: SCPGPAPFIFLTGPAEARGGGVG*PGCRCM Trigger: CATGCACCTGCAGCCTGGCCACCCCACACCGCCGCC...TCGGGCCTCAGCTGGCCCCGTGAGAAAAATGAAGGGTGCAGGCCCAGGGCAGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| 3UTR CAA 72 bp | CGCAGCCGCGCGCCTCACGCGCAGTTGCCCATGGCCTaGACCAAGGAGCTCTCAGGCAGCTGGCGGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: RSRAPHAQLPMA*TKELSGSWRKM Trigger: CATCTTCCGCCAGCTGCCTGAGAGCTCCTTGGTCAAGGCCATGGGCAACTGCGCGTGAGGCGCGCGGCTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205391.2 |
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| 3UTR CAA 72 bp | GGCTTTCAGGCCACACCGGAATCTCCTAGTCCTGGCTaGCGCGGCCCGGGCAGCCTAGAGATCCAGCGACCC | + |
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Preference number: 4 (lower is better) Translates to: GFQATPESPSPG*RGPGSLEIQRP Trigger: GGGTCGCTGGATCTCTAGGCTGCCCGGGCCGCGCAAGCCAGGACTAGGAGATTCCGGTGTGGCCTGAAAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR GCA 90 bp | CGGTCCCGCAGCCGCGCGCCTCACGCGCAGTTGCCCATGGCCTTGACCAAGGAGGTACCCGGTACTCGTTaGTGTTCTTGTCCACCGACT | + |
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Preference number: 4 (lower is better) Translates to: RSRSRAPHAQLPMALTKEVPGTR*CSCPPT Trigger: AGTCGGTGGACAAGAACAGCAACGAGTACCGGGTAC...CTCCTTGGTCAAGGCCATGGGCAACTGCGCGTGAGGCGCGCGGCTGCGGGACCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205391.2 |
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| CDS-3UTR GCA 90 bp | AACAGCGGCTGGCGACATACAGTACACACAAGGCTAATGGTCCCCGTGTCCTCCACAGGGGCTCCAGCCTaGCGTCCAGGTAGCCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: NSGWRHTVHTRLMVPVSSTGAPA*RPGSRP Trigger: CGGCCGGCTACCTGGACGGCAGGCTGGAGCCCCTGT...GGAGGACACGGGGACCATTAGCCTTGTGTGTACTGTATGTCGCCAGCCGCTGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR GCA 90 bp | GGCCCCCAGCTCAGCTCCGCGGAAAGTCTCTCGGTCTCAAGGAGAAACCACCACGCACCGCGATGTTGTTaGGTTCCCGCCGTACCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPQLSSAESLSVSRRNHHAPRCC*VPAVPG Trigger: ACCGGGTACGGCGGGAACGCAACAACATCGCGGTGC...GTGGTGGTTTCTCCTTGAGACCGAGAGACTTTCCGCGGAGCTGAGCTGGGGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CCA 90 bp | CCTTGGACAACTAGGGGAGAGGGGGAAGCCCACTTCATTTCATTGGTCCTCTGGGCGTGGGCGGCGGTGTaGGGTGGCCAGGCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PWTTRGEGEAHFISLVLWAWAAV*GGQAAG Trigger: ACCTGCAGCCTGGCCACCCCACACCGCCGCCCACGC...CCAGAGGACCAATGAAATGAAGTGGGCTTCCCCCTCTCCCCTAGTTGTCCAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR GCA 90 bp | TCCTTCAGCAACAGCGGCTGGCGACATACAGTACACACAAGGCTAATGGTCCCCCCGGCCAGCGCCAGCTaGTTCGCCTCGTCCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SFSNSGWRHTVHTRLMVPPASAS*FASSSS Trigger: CGAGGAGGACGAGGCGAAGCAGCTGGCGCTGGCCGG...GGGGACCATTAGCCTTGTGTGTACTGTATGTCGCCAGCCGCTGTTGCTGAAGGA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR GCA 90 bp | ACTGCCGGGCCCCCAGCTCAGCTCCGCGGAAAGTCTCTCGGTCTCAAGGAGAAAGCTGTTCCACCCGCTTaGGCAGGCGGTCATTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TAGPPAQLRGKSLGLKEKAVPPA*AGGHCH Trigger: GTGACAATGACCGCCTGCGCAAGCGGGTGGAACAGC...TTTCTCCTTGAGACCGAGAGACTTTCCGCGGAGCTGAGCTGGGGGCCCGGCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR TCA 90 bp | AACAGCGGCTGGCGACATACAGTACACACAAGGCTAATGGTCCCCGTGTCCTCCCGCGGGGCTCTTGTTTaGTCACCAGCGGCCGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: NSGWRHTVHTRLMVPVSSRGALV*SPAAVA Trigger: CGCTACGGCCGCTGGTGATCAAACAAGAGCCCCGCG...GGAGGACACGGGGACCATTAGCCTTGTGTGTACTGTATGTCGCCAGCCGCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR CCA 90 bp | AACAGCGGCTGGCGACATACAGTACACACAAGGCTAATGGTCCCCGTGTCCTCCGAGCTCTCAGGCAGCTaGCGGAAGATGCCCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSGWRHTVHTRLMVPVSSELSGS*RKMPRS Trigger: GCTGCGGGGCATCTTCCGCCAGCTGCCTGAGAGCTC...GGAGGACACGGGGACCATTAGCCTTGTGTGTACTGTATGTCGCCAGCCGCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR CCA 90 bp | AATGAGAGCCTCACTCAGCTCCTTCCCCCAGCCGTTAGTGAAGAGTCTCAGTTTTGGCGGTGGCGGCGGTaGCTGGTAGGGGAAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NESLTQLLPPAVSEESQFWRWRR*LVGEEA Trigger: GGCCTCTTCCCCTACCAGCCACCGCCGCCACCGCCA...AAACTGAGACTCTTCACTAACGGCTGGGGGAAGGAGCTGAGTGAGGCTCTCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR TCA 90 bp | CACCCTTGGACAACTAGGGGAGAGGGGGAAGCCCACTTCATTTCATTGGTCCTCCCAGGAACTCGTCGTTaGAGGCGGCCGGGTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: HPWTTRGEGEAHFISLVLPGTRR*RRPGRC Trigger: ACATCGACCCGGCCGCCTTCAACGACGAGTTCCTGG...GAGGACCAATGAAATGAAGTGGGCTTCCCCCTCTCCCCTAGTTGTCCAAGGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR GCA 90 bp | CTCAGCTCCTTCCCCCAGCCGTTAGTGAAGAGTCTCAGTTTGGCAAGAATCAGAGGCTCTGGAGGTGACTaGTCATCGGGGGCCGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSFPQPLVKSLSLARIRGSGGD*SSGAAA Trigger: AGCCGCGGCCCCCGATGAGCAGTCACCTCCAGAGCC...TCTGATTCTTGCCAAACTGAGACTCTTCACTAACGGCTGGGGGAAGGAGCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
||
| CDS-3UTR GCA 90 bp | CCTTGGACAACTAGGGGAGAGGGGGAAGCCCACTTCATTTCATTGGTCCTCTGGTCCTGCTGTCGGCTGTaGTGGAAGAGGTCGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWTTRGEGEAHFISLVLWSCCRL*WKRSAR Trigger: CCTGGCCGACCTCTTCCAGCACAGCCGACAGCAGGA...CCAGAGGACCAATGAAATGAAGTGGGCTTCCCCCTCTCCCCTAGTTGTCCAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
||
| CDS-3UTR GCA 90 bp | AGGCACAAGGTTACTTCCTTAATACTAGTACTGCCGGGCCCCCAGCTCAGCTCCTCCTGCTGTCGGCTGTaGTGGAAGAGGTCGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHKVTSLILVLPGPQLSSSCCRL*WKRSAR Trigger: CCTGGCCGACCTCTTCCAGCACAGCCGACAGCAGGA...GGAGCTGAGCTGGGGGCCCGGCAGTACTAGTATTAAGGAAGTAACCTTGTGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR GCA 90 bp | ACTAGTACTGCCGGGCCCCCAGCTCAGCTCCGCGGAAAGTCTCTCGGTCTCAAGGTACCCGGTACTCGTTaGTGTTCTTGTCCACCGACT | + |
|
Preference number: 4 (lower is better) Translates to: TSTAGPPAQLRGKSLGLKVPGTR*CSCPPT Trigger: AGTCGGTGGACAAGAACAGCAACGAGTACCGGGTAC...CTTGAGACCGAGAGACTTTCCGCGGAGCTGAGCTGGGGGCCCGGCAGTACTAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CCA 90 bp | CCCCCACCCCACAAAGCCCAGAAACCTAGGTCTCTGTCTCCTACCACATGGCTATGTCCACCGACTTCTTaGCTTTGCCCGCACCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPPHKAQKPRSLSPTTWLCPPTS*LCPHRH Trigger: GTGCCGGTGCGGGCAAAGCCAAGAAGTCGGTGGACA...TAGCCATGTGGTAGGAGACAGAGACCTAGGTTTCTGGGCTTTGTGGGGTGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR TCA 90 bp | CATAACTCCAGTCCCTCTGGGATGGATCGATTGTGCTTCAAGTTCCTTCAGCAATTGTCCACCGACTTATaGCCGCGCCGCCGGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HNSSPSGMDRLCFKFLQQLSTDL*PRRRGP Trigger: CGGGCCCCGGCGGCGCGGTCATAAGTCGGTGGACAA...TTGCTGAAGGAACTTGAAGCACAATCGATCCATCCCAGAGGGACTGGAGTTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205391.2 |
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| CDS-3UTR GCA 90 bp | TTGCACAAGGCACCGCTGGGACACAGAGACCAGATACAAGTGTTGATATCGGATGGCTCTGGAGGTGACTaGTCATCGGGGGCCGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHKAPLGHRDQIQVLISDGSGGD*SSGAAA Trigger: AGCCGCGGCCCCCGATGAGCAGTCACCTCCAGAGCC...ATCCGATATCAACACTTGTATCTGGTCTCTGTGTCCCAGCGGTGCCTTGTGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR GCA 90 bp | CACCCTTGGACAACTAGGGGAGAGGGGGAAGCCCACTTCATTTCATTGGTCCTCGCCTTGGCCTTCTCCTaGTGTCGGCTGTGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HPWTTRGEGEAHFISLVLALAFS*CRLCWK Trigger: CTTCCAGCACAGCCGACAGCAGGAGAAGGCCAAGGC...GAGGACCAATGAAATGAAGTGGGCTTCCCCCTCTCCCCTAGTTGTCCAAGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR GCA 90 bp | CCCCAGCCGTTAGTGAAGAGTCTCAGTTTGGCAAGAATCAGAGCAAAACCAAAATCTCGTGCTCGCAGATaGCGCCCAGCGGCTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQPLVKSLSLARIRAKPKSRARR*RPAAPG Trigger: CCCCGGAGCCGCTGGGCGGCATCTGCGAGCACGAGA...TTTTGGTTTTGCTCTGATTCTTGCCAAACTGAGACTCTTCACTAACGGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR TCA 90 bp | GATCGATTGTGCTTCAAGTTCCTTCAGCAACAGCGGCTGGCGACATACAGTACACCAGGAACTCGTCGTTaGAGGCGGCCGGGTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: DRLCFKFLQQQRLATYSTPGTRR*RRPGRC Trigger: ACATCGACCCGGCCGCCTTCAACGACGAGTTCCTGG...TGTACTGTATGTCGCCAGCCGCTGTTGCTGAAGGAACTTGAAGCACAATCGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR GCA 90 bp | AATGAGAGCCTCACTCAGCTCCTTCCCCCAGCCGTTAGTGAAGAGTCTCAGTTTGCCTTGGCCTTCTCCTaGTGTCGGCTGTGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NESLTQLLPPAVSEESQFALAFS*CRLCWK Trigger: CTTCCAGCACAGCCGACAGCAGGAGAAGGCCAAGGC...AAACTGAGACTCTTCACTAACGGCTGGGGGAAGGAGCTGAGTGAGGCTCTCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR GCA 90 bp | AACAGCGGCTGGCGACATACAGTACACACAAGGCTAATGGTCCCCGTGTCCTCCTCCAGCACCTTCTGTTaGGTCTCCACGTTGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSGWRHTVHTRLMVPVSSSSTFC*VSTLRC Trigger: ACAACGCAACGTGGAGACGCAACAGAAGGTGCTGGA...GGAGGACACGGGGACCATTAGCCTTGTGTGTACTGTATGTCGCCAGCCGCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CCA 90 bp | CATAACTCCAGTCCCTCTGGGATGGATCGATTGTGCTTCAAGTTCCTTCAGCAAATCTGGAACTGCAAGTaGGGGGCGGCCAGGTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: HNSSPSGMDRLCFKFLQQIWNCK*GAARCA Trigger: CGCGCACCTGGCCGCCCCCCACTTGCAGTTCCAGAT...TTGCTGAAGGAACTTGAAGCACAATCGATCCATCCCAGAGGGACTGGAGTTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR GCA 90 bp | GGAGCGAGTTTTGAGTATCCAAGGCACAAGGTTACTTCCTTAATACTAGTACTGTCTCGTGCTCGCAGATaGCGCCCAGCGGCTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GASFEYPRHKVTSLILVLSRARR*RPAAPG Trigger: CCCCGGAGCCGCTGGGCGGCATCTGCGAGCACGAGA...CAGTACTAGTATTAAGGAAGTAACCTTGTGCCTTGGATACTCAAAACTCGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR GCA 90 bp | AATGAGAGCCTCACTCAGCTCCTTCCCCCAGCCGTTAGTGAAGAGTCTCAGTTTTCTATAGACGTCTCGTaGTCGCAGATGCCGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NESLTQLLPPAVSEESQFSIDVS*SQMPPS Trigger: GCTGGGCGGCATCTGCGAGCACGAGACGTCTATAGA...AAACTGAGACTCTTCACTAACGGCTGGGGGAAGGAGCTGAGTGAGGCTCTCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR GCA 90 bp | AAGGCACCGCTGGGACACAGAGACCAGATACAAGTGTTGATATCGGATGATAAATGGCCAGGCTGCAGGTaGATGGTGGTCTGGCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KAPLGHRDQIQVLISDDKWPGCR*MVVWPQ Trigger: CTGCGGCCAGACCACCATGCACCTGCAGCCTGGCCA...TTTATCATCCGATATCAACACTTGTATCTGGTCTCTGTGTCCCAGCGGTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR GCA 90 bp | CATAACTCCAGTCCCTCTGGGATGGATCGATTGTGCTTCAAGTTCCTTCAGCAAGCACCGCGATGTTGTTaGGTTCCCGCCGTACCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HNSSPSGMDRLCFKFLQQAPRCC*VPAVPG Trigger: ACCGGGTACGGCGGGAACGCAACAACATCGCGGTGC...TTGCTGAAGGAACTTGAAGCACAATCGATCCATCCCAGAGGGACTGGAGTTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CCA 90 bp | AGGCACAAGGTTACTTCCTTAATACTAGTACTGCCGGGCCCCCAGCTCAGCTCCGGCGGTCATTGTCACTaGTCAACTCCAGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHKVTSLILVLPGPQLSSGGHCH*STPAPS Trigger: AGAAGGTGCTGGAGTTGACCAGTGACAATGACCGCC...GGAGCTGAGCTGGGGGCCCGGCAGTACTAGTATTAAGGAAGTAACCTTGTGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR CCA 90 bp | CAGCCGTTAGTGAAGAGTCTCAGTTTGGCAAGAATCAGAGCAAAACCAAAACAATGCTGTCGGCTGTGCTaGAAGAGGTCGGCCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QPLVKSLSLARIRAKPKQCCRLC*KRSARN Trigger: GTTCCTGGCCGACCTCTTCCAGCACAGCCGACAGCA...TTGTTTTGGTTTTGCTCTGATTCTTGCCAAACTGAGACTCTTCACTAACGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR GCA 90 bp | GCTGAGGCCCGAGAGGAAGCAGGAATCCTCCAAATAAAATATCAAGGCACATTTTCCAGCACCTTCTGTTaGGTCTCCACGTTGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AEAREEAGILQIKYQGTFSSTFC*VSTLRC Trigger: ACAACGCAACGTGGAGACGCAACAGAAGGTGCTGGA...AAATGTGCCTTGATATTTTATTTGGAGGATTCCTGCTTCCTCTCGGGCCTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| 3UTR CAA 72 bp | AAGGCACCGCTGGGACACAGAGACCAGATACAAGTGTaGATATCGGATGATAAAGCAAAATATTTGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KAPLGHRDQIQV*ISDDKAKYLGS Trigger: GCTTCCCAAATATTTTGCTTTATCATCCGATATCAACACTTGTATCTGGTCTCTGTGTCCCAGCGGTGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS TCA 90 bp | CGCCGCCTCCCGTGCGGAGGTCGGGGTGCGCACCGGCCAAGCCCTTaGGCGCGCTCCCGGGGCCAGGCAGGCCCGCAGCACCCAAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRLPCGGRGAHRPSP*ARSRGQAGPQHPRR Trigger: CCGCCTTGGGTGCTGCGGGCCTGCCTGGCCCCGGGAGCGCGCTCAAGGGCTTGGCCGGTGCGCACCCCGACCTCCGCACGGGAGGCGGCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS CCA 90 bp | GGCGGCCAGGTGCGCGGGAGACGCGTGCGGGTGCGGCGGTGGCGGTaGCGGCGGTGGCTGGTAGGGGAAGAGGCCGGCCAGCGCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGQVRGRRVRVRRWR*RRWLVGEEAGQRQL Trigger: CAGCTGGCGCTGGCCGGCCTCTTCCCCTACCAGCCACCGCCGCCACCGCCACCGCCGCACCCGCACGCGTCTCCCGCGCACCTGGCCGCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS GCA 90 bp | GCCGTAGCGCGGGCGCCCCGACGCGCTCGTACAGGGGCTCCAGCCTaGCGTCCAGGTAGCCGGCCGCCGCACAGCCGTAGCCGGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AVARAPRRARTGAPA*RPGSRPPHSRSREG Trigger: CCCCTCCCGGCTACGGCTGTGCGGCGGCCGGCTACCTGGACGGCAGGCTGGAGCCCCTGTACGAGCGCGTCGGGGCGCCCGCGCTACGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS CCA 90 bp | AGGCGGGCGCAGCGTGCGGGCTGGGCACGGGCGTGGGCGGCGGTGTaGGGTGGCCAGGCTGCAGGTGCATGGTGGTCTGGCCGCAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RRAQRAGWARAWAAV*GGQAAGAWWSGRSA Trigger: CGCACTGCGGCCAGACCACCATGCACCTGCAGCCTGGCCACCCCACACCGCCGCCCACGCCCGTGCCCAGCCCGCACGCTGCGCCCGCCT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS CCA 90 bp | GGCGCAGCGTGCGGGCTGGGCACGGGCGTGGGCGGCGGTGTGGGGTaGCCAGGCTGCAGGTGCATGGTGGTCTGGCCGCAGTGCGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: GAACGLGTGVGGGVG*PGCRCMVVWPQCAI Trigger: GATCGCGCACTGCGGCCAGACCACCATGCACCTGCAGCCTGGCCACCCCACACCGCCGCCCACGCCCGTGCCCAGCCCGCACGCTGCGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS CCA 90 bp | CCGCAGCACCCAAGGCGGGCGCAGCGTGCGGGCTGGGCACGGGCGTaGGCGGCGGTGTGGGGTGGCCAGGCTGCAGGTGCATGGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PQHPRRAQRAGWARA*AAVWGGQAAGAWWS Trigger: AGACCACCATGCACCTGCAGCCTGGCCACCCCACACCGCCGCCCACGCCCGTGCCCAGCCCGCACGCTGCGCCCGCCTTGGGTGCTGCGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS GCA 90 bp | CCCGCGGGGCCCGCCGCCGCCTTGGCCTTCTCCTGCTGTCGGCTGTaGTGGAAGAGGTCGGCCAGGAACTCGTCGTTGAAGGCGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PAGPAAALAFSCCRL*WKRSARNSSLKAAG Trigger: CCCGGCCGCCTTCAACGACGAGTTCCTGGCCGACCTCTTCCAGCACAGCCGACAGCAGGAGAAGGCCAAGGCGGCGGCGGGCCCCGCGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
||
| CDS GCA 90 bp | TGCGGGCTGGGCACGGGCGTGGGCGGCGGTGTGGGGTGGCCAGGCTaGAGGTGCATGGTGGTCTGGCCGCAGTGCGCGATCTGGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: CGLGTGVGGGVGWPG*RCMVVWPQCAIWNC Trigger: GCAGTTCCAGATCGCGCACTGCGGCCAGACCACCATGCACCTGCAGCCTGGCCACCCCACACCGCCGCCCACGCCCGTGCCCAGCCCGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS GCA 90 bp | TGTTCTTGTCCACCGACTTCTTGGCTTTGCCCGCACCGGCACCGCTaGCACCGCCGCCGCCTCCCGTGCGGAGGTCGGGGTGCGCACCGG | + |
|
Preference number: 5 (lower is better) Translates to: CSCPPTSWLCPHRHR*HRRRLPCGGRGAHR Trigger: CCGGTGCGCACCCCGACCTCCGCACGGGAGGCGGCGGCGGTGGCAGCGGTGCCGGTGCGGGCAAAGCCAAGAAGTCGGTGGACAAGAACA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
||
| CDS CCA 90 bp | GCGGGGCCCGCCGCCGCCTTGGCCTTCTCCTGCTGTCGGCTGTGCTaGAAGAGGTCGGCCAGGAACTCGTCGTTGAAGGCGGCCGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: AGPAAALAFSCCRLC*KRSARNSSLKAAGS Trigger: CGACCCGGCCGCCTTCAACGACGAGTTCCTGGCCGACCTCTTCCAGCACAGCCGACAGCAGGAGAAGGCCAAGGCGGCGGCGGGCCCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
||
| CDS CCA 90 bp | AGGTGCATGGTGGTCTGGCCGCAGTGCGCGATCTGGAACTGCAAGTaGGGGGCGGCCAGGTGCGCGGGAGACGCGTGCGGGTGCGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RCMVVWPQCAIWNCK*GAARCAGDACGCGG Trigger: ACCGCCGCACCCGCACGCGTCTCCCGCGCACCTGGCCGCCCCCCACTTGCAGTTCCAGATCGCGCACTGCGGCCAGACCACCATGCACCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
||
| CDS TCA 90 bp | CCAGCGCCAGCTGCTTCGCCTCGTCCTCCTCGCGGGGCTCTTGTTTaGTCACCAGCGGCCGTAGCGCGGGCGCCCCGACGCGCTCGTACA | + |
|
Preference number: 5 (lower is better) Translates to: PAPAASPRPPRGALV*SPAAVARAPRRART Trigger: TGTACGAGCGCGTCGGGGCGCCCGCGCTACGGCCGCTGGTGATCAAACAAGAGCCCCGCGAGGAGGACGAGGCGAAGCAGCTGGCGCTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
||
| CDS-3UTR CAA 90 bp | CCTCCTGCCCTGGGCCTGCACCCTTCATTTTTCTCACGGGGCCAGCTGAGGCCCCGCACCGCGATGTTGTaGCGTTCCCGCCGTACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PPALGLHPSFFSRGQLRPRTAML*RSRRTR Trigger: CCGGGTACGGCGGGAACGCAACAACATCGCGGTGCG...GGGCCTCAGCTGGCCCCGTGAGAAAAATGAAGGGTGCAGGCCCAGGGCAGGAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCCGGGCCCCCAGCTCAGCTCCGCGGAAAGTCTCTCGGTCTCAAGGAGAAAGCCAGGAACTCGTCGTaGAAGGCGGCCGGGTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: TAGPPAQLRGKSLGLKEKARNSS*KAAGSM Trigger: CATCGACCCGGCCGCCTTCAACGACGAGTTCCTGGC...TTTCTCCTTGAGACCGAGAGACTTTCCGCGGAGCTGAGCTGGGGGCCCGGCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
||
| CDS-3UTR CAA 90 bp | ACTAGTACTGCCGGGCCCCCAGCTCAGCTCCGCGGAAAGTCTCTCGGTCTCAAGACCGACTTCTTGGCTTaGCCCGCACCGGCACCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSTAGPPAQLRGKSLGLKTDFLA*PAPAPL Trigger: CAGCGGTGCCGGTGCGGGCAAAGCCAAGAAGTCGGT...CTTGAGACCGAGAGACTTTCCGCGGAGCTGAGCTGGGGGCCCGGCAGTACTAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR CAA 90 bp | ACTGCCGGGCCCCCAGCTCAGCTCCGCGGAAAGTCTCTCGGTCTCAAGGAGAAATCGCGGGGCTCTTGTTaGATCACCAGCGGCCGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TAGPPAQLRGKSLGLKEKSRGSC*ITSGRS Trigger: GCTACGGCCGCTGGTGATCAAACAAGAGCCCCGCGA...TTTCTCCTTGAGACCGAGAGACTTTCCGCGGAGCTGAGCTGGGGGCCCGGCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR CAA 90 bp | CCTCCTGCCCTGGGCCTGCACCCTTCATTTTTCTCACGGGGCCAGCTGAGGCCCCGTACCCGGTACTCGTaGCTGTTCTTGTCCACCGAC | + |
|
Preference number: 5 (lower is better) Translates to: PPALGLHPSFFSRGQLRPRTRYS*LFLSTD Trigger: GTCGGTGGACAAGAACAGCAACGAGTACCGGGTACG...GGGCCTCAGCTGGCCCCGTGAGAAAAATGAAGGGTGCAGGCCCAGGGCAGGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CAA 90 bp | CTAGGGGAGAGGGGGAAGCCCACTTCATTTCATTGGTCCTCTGGGAGGCAGACGCGCACCGCGATGTTGTaGCGTTCCCGCCGTACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LGERGKPTSFHWSSGRQTRTAML*RSRRTR Trigger: CCGGGTACGGCGGGAACGCAACAACATCGCGGTGCG...CGTCTGCCTCCCAGAGGACCAATGAAATGAAGTGGGCTTCCCCCTCTCCCCTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CAA 90 bp | GGCCCCCAGCTCAGCTCCGCGGAAAGTCTCTCGGTCTCAAGGAGAAACCACCACTTGCGCACCGCGATGTaGTTGCGTTCCCGCCGTACC | + |
|
Preference number: 5 (lower is better) Translates to: GPQLSSAESLSVSRRNHHLRTAM*LRSRRT Trigger: GGTACGGCGGGAACGCAACAACATCGCGGTGCGCAA...GTGGTGGTTTCTCCTTGAGACCGAGAGACTTTCCGCGGAGCTGAGCTGGGGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CAA 90 bp | CCCCGCAGCGTGTCCAGTTCACGGCTCAGCTGTTCCACCCGCTTGCGCAGGCGGCGTCTCCACGTTGCGTaGTTTGGCTTTATCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PRSVSSSRLSCSTRLRRRRLHVA*FGFISA Trigger: AGCCGAGATAAAGCCAAACAACGCAACGTGGAGACG...CCGCCTGCGCAAGCGGGTGGAACAGCTGAGCCGTGAACTGGACACGCTGCGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205391.2 |
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| CDS-3UTR CAA 90 bp | ACTAGTACTGCCGGGCCCCCAGCTCAGCTCCGCGGAAAGTCTCTCGGTCTCAAGAGCTGTTCCACCCGCTaGCGCAGGCGGTCATTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSTAGPPAQLRGKSLGLKSCSTR*RRRSLS Trigger: TGACAATGACCGCCTGCGCAAGCGGGTGGAACAGCT...CTTGAGACCGAGAGACTTTCCGCGGAGCTGAGCTGGGGGCCCGGCAGTACTAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS GCA 90 bp | TGCCCCGCAGCGTGTCCAGTTCACGGCTCAGCTGTTCCACCCGCTTaGGCAGGCGGTCATTGTCACTGGTCAACTCCAGCACCTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CPAACPVHGSAVPPA*AGGHCHWSTPAPSV Trigger: AACAGAAGGTGCTGGAGTTGACCAGTGACAATGACCGCCTGCGCAAGCGGGTGGAACAGCTGAGCCGTGAACTGGACACGCTGCGGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR CAA 90 bp | ACTGCCGGGCCCCCAGCTCAGCTCCGCGGAAAGTCTCTCGGTCTCAAGGAGAAACTCCAGCACCTTCTGTaGCGTCTCCACGTTGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TAGPPAQLRGKSLGLKEKLQHLL*RLHVAL Trigger: CAACGCAACGTGGAGACGCAACAGAAGGTGCTGGAG...TTTCTCCTTGAGACCGAGAGACTTTCCGCGGAGCTGAGCTGGGGGCCCGGCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CAA 90 bp | CTCCCTCATCTTAGACGCACCGAGTCCGGCTCAGAGGAAGGGAGGGGACACGCGTCCACGTTGCGTTGTTaGGCTTTATCTCGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPHLRRTESGSEEGRGHASTLRC*ALSRLL Trigger: CAAGAGCCGAGATAAAGCCAAACAACGCAACGTGGA...CGCGTGTCCCCTCCCTTCCTCTGAGCCGGACTCGGTGCGTCTAAGATGAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTGCCCTGGGCCTGCACCCTTCATTTTTCTCACGGGGCCAGCTGAGGCCCTGTTGCGTCTCCACGTaGCGTTGTTTGGCTTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: PPALGLHPSFFSRGQLRPCCVST*RCLALS Trigger: AGATAAAGCCAAACAACGCAACGTGGAGACGCAACA...GGGCCTCAGCTGGCCCCGTGAGAAAAATGAAGGGTGCAGGCCCAGGGCAGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CAA 90 bp | CCATTGCACAAGGCACCGCTGGGACACAGAGACCAGATACAAGTGTTGATATCGCTCCTCGCGGGGCTCTaGTTTGATCACCAGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PLHKAPLGHRDQIQVLISLLAGL*FDHQRP Trigger: CGGCCGCTGGTGATCAAACAAGAGCCCCGCGAGGAG...CGATATCAACACTTGTATCTGGTCTCTGTGTCCCAGCGGTGCCTTGTGCAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR CAA 90 bp | AGAGCCTCACTCAGCTCCTTCCCCCAGCCGTTAGTGAAGAGTCTCAGTTTGGCATTGTCCACCGACTTCTaGGCTTTGCCCGCACCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RASLSSFPQPLVKSLSLALSTDF*ALPAPA Trigger: TGCCGGTGCGGGCAAAGCCAAGAAGTCGGTGGACAA...TGCCAAACTGAGACTCTTCACTAACGGCTGGGGGAAGGAGCTGAGTGAGGCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR CAA 90 bp | AATGAGAGCCTCACTCAGCTCCTTCCCCCAGCCGTTAGTGAAGAGTCTCAGTTTTTGCGCACCGCGATGTaGTTGCGTTCCCGCCGTACC | + |
|
Preference number: 5 (lower is better) Translates to: NESLTQLLPPAVSEESQFLRTAM*LRSRRT Trigger: GGTACGGCGGGAACGCAACAACATCGCGGTGCGCAA...AAACTGAGACTCTTCACTAACGGCTGGGGGAAGGAGCTGAGTGAGGCTCTCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CAA 90 bp | ACTAGTACTGCCGGGCCCCCAGCTCAGCTCCGCGGAAAGTCTCTCGGTCTCAAGTGTTGCGTCTCCACGTaGCGTTGTTTGGCTTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: TSTAGPPAQLRGKSLGLKCCVST*RCLALS Trigger: AGATAAAGCCAAACAACGCAACGTGGAGACGCAACA...CTTGAGACCGAGAGACTTTCCGCGGAGCTGAGCTGGGGGCCCGGCAGTACTAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CAA 90 bp | CTCACAACTCAGCTTTCTGGTCTGACTGGGGGTGGTGCCCCCATTCTCCATGAACTCCAGCACCTTCTGTaGCGTCTCCACGTTGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTTQLSGLTGGGAPILHELQHLL*RLHVAL Trigger: CAACGCAACGTGGAGACGCAACAGAAGGTGCTGGAG...TTCATGGAGAATGGGGGCACCACCCCCAGTCAGACCAGAAAGCTGAGTTGTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CAA 90 bp | ATACACCCTTGGACAACTAGGGGAGAGGGGGAAGCCCACTTCATTTCATTGGTCCAGTTGCCCATGGCCTaGACCAAGGAGCTCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IHPWTTRGEGEAHFISLVQLPMA*TKELSG Trigger: GCCTGAGAGCTCCTTGGTCAAGGCCATGGGCAACTG...GACCAATGAAATGAAGTGGGCTTCCCCCTCTCCCCTAGTTGTCCAAGGGTGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS-3UTR CAA 90 bp | CCATTGCACAAGGCACCGCTGGGACACAGAGACCAGATACAAGTGTTGATATCGCGTACCCGGTACTCGTaGCTGTTCTTGTCCACCGAC | + |
|
Preference number: 5 (lower is better) Translates to: PLHKAPLGHRDQIQVLISRTRYS*LFLSTD Trigger: GTCGGTGGACAAGAACAGCAACGAGTACCGGGTACG...CGATATCAACACTTGTATCTGGTCTCTGTGTCCCAGCGGTGCCTTGTGCAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CAA 90 bp | AATGAGAGCCTCACTCAGCTCCTTCCCCCAGCCGTTAGTGAAGAGTCTCAGTTTCGTCTCCACGTTGCGTaGTTTGGCTTTATCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NESLTQLLPPAVSEESQFRLHVA*FGFISA Trigger: AGCCGAGATAAAGCCAAACAACGCAACGTGGAGACG...AAACTGAGACTCTTCACTAACGGCTGGGGGAAGGAGCTGAGTGAGGCTCTCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CAA 90 bp | TTGCACAAGGCACCGCTGGGACACAGAGACCAGATACAAGTGTTGATATCGGATTCCACGTTGCGTTGTTaGGCTTTATCTCGGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LHKAPLGHRDQIQVLISDSTLRC*ALSRLL Trigger: CAAGAGCCGAGATAAAGCCAAACAACGCAACGTGGA...ATCCGATATCAACACTTGTATCTGGTCTCTGTGTCCCAGCGGTGCCTTGTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CAA 90 bp | GACCAGATACAAGTGTTGATATCGGATGATAAAGCAAAATATTTGGGAAGCTTGGCCAGGAACTCGTCGTaGAAGGCGGCCGGGTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: DQIQVLISDDKAKYLGSLARNSS*KAAGSM Trigger: CATCGACCCGGCCGCCTTCAACGACGAGTTCCTGGC...CAAGCTTCCCAAATATTTTGCTTTATCATCCGATATCAACACTTGTATCTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS-3UTR CAA 90 bp | CATAACTCCAGTCCCTCTGGGATGGATCGATTGTGCTTCAAGTTCCTTCAGCAATACTCGTTGCTGTTCTaGTCCACCGACTTCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HNSSPSGMDRLCFKFLQQYSLLF*STDFLA Trigger: AGCCAAGAAGTCGGTGGACAAGAACAGCAACGAGTA...TTGCTGAAGGAACTTGAAGCACAATCGATCCATCCCAGAGGGACTGGAGTTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS CAA 90 bp | CCGCCGCCTCCCGTGCGGAGGTCGGGGTGCGCACCGGCCAAGCCCTaGAGCGCGCTCCCGGGGCCAGGCAGGCCCGCAGCACCCAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PPPPVRRSGCAPAKP*SALPGPGRPAAPKA Trigger: CGCCTTGGGTGCTGCGGGCCTGCCTGGCCCCGGGAGCGCGCTCAAGGGCTTGGCCGGTGCGCACCCCGACCTCCGCACGGGAGGCGGCGG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS TCA 72 bp | CCGTGCGGAGGTCGGGGTGCGCACCGGCCAAGCCCTTaGGCGCGCTCCCGGGGCCAGGCAGGCCCGCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PCGGRGAHRPSP*ARSRGQAGPQH Trigger: GTGCTGCGGGCCTGCCTGGCCCCGGGAGCGCGCTCAAGGGCTTGGCCGGTGCGCACCCCGACCTCCGCACGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS CCA 72 bp | CCAAGGCGGGCGCAGCGTGCGGGCTGGGCACGGGCGTaGGCGGCGGTGTGGGGTGGCCAGGCTGCAGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PRRAQRAGWARA*AAVWGGQAAGA Trigger: TGCACCTGCAGCCTGGCCACCCCACACCGCCGCCCACGCCCGTGCCCAGCCCGCACGCTGCGCCCGCCTTGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS CAA 72 bp | CCCGTGCGGAGGTCGGGGTGCGCACCGGCCAAGCCCTaGAGCGCGCTCCCGGGGCCAGGCAGGCCCGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PVRRSGCAPAKP*SALPGPGRPAA Trigger: TGCTGCGGGCCTGCCTGGCCCCGGGAGCGCGCTCAAGGGCTTGGCCGGTGCGCACCCCGACCTCCGCACGGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS GCA 72 bp | CGGGCGCCCCGACGCGCTCGTACAGGGGCTCCAGCCTaGCGTCCAGGTAGCCGGCCGCCGCACAGCCGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAPRRARTGAPA*RPGSRPPHSRS Trigger: GCTACGGCTGTGCGGCGGCCGGCTACCTGGACGGCAGGCTGGAGCCCCTGTACGAGCGCGTCGGGGCGCCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS GCA 72 bp | CCACCCGCGGGGCCCGCCGCCGCCTTGGCCTTCTCCTaGTGTCGGCTGTGCTGGAAGAGGTCGGCCAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: PPAGPAAALAFS*CRLCWKRSARN Trigger: GTTCCTGGCCGACCTCTTCCAGCACAGCCGACAGCAGGAGAAGGCCAAGGCGGCGGCGGGCCCCGCGGGTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS CCA 72 bp | GTGGTCTGGCCGCAGTGCGCGATCTGGAACTGCAAGTaGGGGGCGGCCAGGTGCGCGGGAGACGCGTGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: VVWPQCAIWNCK*GAARCAGDACG Trigger: CCCGCACGCGTCTCCCGCGCACCTGGCCGCCCCCCACTTGCAGTTCCAGATCGCGCACTGCGGCCAGACCAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS TCA 72 bp | GCTGCTTCGCCTCGTCCTCCTCGCGGGGCTCTTGTTTaGTCACCAGCGGCCGTAGCGCGGGCGCCCCGACGC | + |
|
Preference number: 6 (lower is better) Translates to: AASPRPPRGALV*SPAAVARAPRR Trigger: GCGTCGGGGCGCCCGCGCTACGGCCGCTGGTGATCAAACAAGAGCCCCGCGAGGAGGACGAGGCGAAGCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS CCA 72 bp | GGTGTGGGGTGGCCAGGCTGCAGGTGCATGGTGGTCTaGCCGCAGTGCGCGATCTGGAACTGCAAGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GVGWPGCRCMVV*PQCAIWNCKWG Trigger: CCCCCACTTGCAGTTCCAGATCGCGCACTGCGGCCAGACCACCATGCACCTGCAGCCTGGCCACCCCACACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS GCA 72 bp | CCCGCCGCCGCCTTGGCCTTCTCCTGCTGTCGGCTGTaGTGGAAGAGGTCGGCCAGGAACTCGTCGTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PAAALAFSCCRL*WKRSARNSSLK Trigger: CTTCAACGACGAGTTCCTGGCCGACCTCTTCCAGCACAGCCGACAGCAGGAGAAGGCCAAGGCGGCGGCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS CCA 72 bp | GCCGCCGCCTTGGCCTTCTCCTGCTGTCGGCTGTGCTaGAAGAGGTCGGCCAGGAACTCGTCGTTGAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: AAALAFSCCRLC*KRSARNSSLKA Trigger: CGCCTTCAACGACGAGTTCCTGGCCGACCTCTTCCAGCACAGCCGACAGCAGGAGAAGGCCAAGGCGGCGGC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042985.11 ENSMUST00000205391.2 |
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| CDS CCA 72 bp | CCCGGTACTCGTTGCTGTTCTTGTCCACCGACTTCTTaGCTTTGCCCGCACCGGCACCGCTGCCACCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PGTRCCSCPPTS*LCPHRHRCHRR Trigger: GCGGCGGTGGCAGCGGTGCCGGTGCGGGCAAAGCCAAGAAGTCGGTGGACAAGAACAGCAACGAGTACCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS CAA 72 bp | ACCCGGTACTCGTTGCTGTTCTTGTCCACCGACTTCTaGGCTTTGCCCGCACCGGCACCGCTGCCACCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TRYSLLFLSTDF*ALPAPAPLPPP Trigger: CGGCGGTGGCAGCGGTGCCGGTGCGGGCAAAGCCAAGAAGTCGGTGGACAAGAACAGCAACGAGTACCGGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS GCA 72 bp | GCGTGTCCAGTTCACGGCTCAGCTGTTCCACCCGCTTaGGCAGGCGGTCATTGTCACTGGTCAACTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ACPVHGSAVPPA*AGGHCHWSTPA Trigger: TGCTGGAGTTGACCAGTGACAATGACCGCCTGCGCAAGCGGGTGGAACAGCTGAGCCGTGAACTGGACACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS CAA 72 bp | TTGCGTTCCCGCCGTACCCGGTACTCGTTGCTGTTCTaGTCCACCGACTTCTTGGCTTTGCCCGCACCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LRSRRTRYSLLF*STDFLALPAPA Trigger: TGCCGGTGCGGGCAAAGCCAAGAAGTCGGTGGACAAGAACAGCAACGAGTACCGGGTACGGCGGGAACGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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| CDS CAA 72 bp | AGCGTGTCCAGTTCACGGCTCAGCTGTTCCACCCGCTaGCGCAGGCGGTCATTGTCACTGGTCAACTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SVSSSRLSCSTR*RRRSLSLVNSS Trigger: GCTGGAGTTGACCAGTGACAATGACCGCCTGCGCAAGCGGGTGGAACAGCTGAGCCGTGAACTGGACACGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042985.11 |
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