Pregenerated sensors for CEACAM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053228Ensembl transcript IDs: ENSMUST00000108491.8
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGGGAAAGGTCAGTCCCTTCTCCTGTTATTTGTCCTCCCTTCACATaGATGACCGGTGTCCAGGCAGCATTGGTGCTATGTGAATCAGTT | + |
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Preference number: 1 (lower is better) Translates to: RERSVPSPVICPPFT*MTGVQAALVLCESV Trigger: AACTGATTCACATAGCACCAATGCTGCCTGGACACCGGTCATTCATGTGAAGGGAGGACAAATAACAGGAGAAGGGACTGACCTTTCCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR GCA 90 bp | GCTTTCTCTTTTTGGAAACCAAGTCTCTATGATCTGGCCTGCCCTTaGACATGTTTATCCCAGGAATACAGATGTGACTCACCATGCTGG | + |
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Preference number: 1 (lower is better) Translates to: AFSFWKPSLYDLACP*TCLSQEYRCDSPCW Trigger: CCAGCATGGTGAGTCACATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTGGTTTCCAAAAAGAGAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR GCA 90 bp | ATTGATGCTTTCTCTTTTTGGAAACCAAGTCTCTATGATCTGGCCTaGCCTTGCACATGTTTATCCCAGGAATACAGATGTGACTCACCA | + |
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Preference number: 1 (lower is better) Translates to: IDAFSFWKPSLYDLA*PCTCLSQEYRCDSP Trigger: TGGTGAGTCACATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTGGTTTCCAAAAAGAGAAAGCATCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR TCA 90 bp | GTTTATCCCAGGAATACAGATGTGACTCACCATGCTGGCTGTACCTaGGTAGTAACTGACAATTTTCACCACATAACTCTGCTCCATTTT | + |
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Preference number: 1 (lower is better) Translates to: VYPRNTDVTHHAGCT*VVTDNFHHITLLHF Trigger: AAAATGGAGCAGAGTTATGTGGTGAAAATTGTCAGTTACTACTCAGGTACAGCCAGCATGGTGAGTCACATCTGTATTCCTGGGATAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR CCA 90 bp | GAAAAAGAATCTTATGAACACTACTGTCAGGATACAGAGTCCAATTaGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: EKESYEHYCQDTESN*VSAMDATSVHQTVG Trigger: ACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATTGGACTCTGTATCCTGACAGTAGTGTTCATAAGATTCTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR TCA 90 bp | GCATCTAGAACATTAGTGGCTGCTGAAATTAGTTTCCATGGATTCTaGGGATTGGCTCTGTATTTGATCCACAACCTAATGCTTAACACC | + |
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Preference number: 1 (lower is better) Translates to: ASRTLVAAEISFHGF*GLALYLIHNLMLNT Trigger: GGTGTTAAGCATTAGGTTGTGGATCAAATACAGAGCCAATCCTCAGAATCCATGGAAACTAATTTCAGCAGCCACTAATGTTCTAGATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR CAA 90 bp | CACAAGTTATGTCCACCGGGAAAGGTCAGTCCCTTCTCCTGTTATTaGTCCTCCCTTCACATGAATGACCGGTGTCCAGGCAGCATTGGT | + |
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Preference number: 2 (lower is better) Translates to: HKLCPPGKVSPFSCY*SSLHMNDRCPGSIG Trigger: ACCAATGCTGCCTGGACACCGGTCATTCATGTGAAGGGAGGACAAATAACAGGAGAAGGGACTGACCTTTCCCGGTGGACATAACTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR-3UTR TCA 90 bp | AATTGGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGTAAAAACGAAACCAAGTCTCTATaGTCTGGCCTGCCCTTGCAC | + |
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Preference number: 2 (lower is better) Translates to: NWVSAMDATSVHQTVGKNETKSL*SGLPLH Trigger: GTGCAAGGGCAGGCCAGATCATAGAGACTTGGTTTC...GTTTTTACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGCTGTACTTCTGAAGATCTGGCCTGCCCTTaGACATGTTTATCCCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: QKSLKLVSKYIQLSCTSEDLACP*TCLSQE Trigger: TTCCTGGGATAAACATGTGCAAGGGCAGGCCAGATC...TTCAGAAGTACAGCTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTCCAATTGGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGTTACCTGAGTAGTAACTaGCAATTTTCACCACATAAC | + |
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Preference number: 2 (lower is better) Translates to: ESNWVSAMDATSVHQTVGYLSSN*QFSPHN Trigger: GTTATGTGGTGAAAATTGTCAGTTACTACTCAGGTA...ACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATTGGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR-3UTR GCA 90 bp | AAACTATTTAGACACAAGTTATGTCCACCGGGAAAGGTCAGTCCCTTCTCCTGTTCCAGGCAGCATTGGTaGTATGTGAATCAGTTATAC | + |
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Preference number: 2 (lower is better) Translates to: KLFRHKLCPPGKVSPFSCSRQHW*YVNQLY Trigger: GTATAACTGATTCACATAGCACCAATGCTGCCTGGA...ACAGGAGAAGGGACTGACCTTTCCCGGTGGACATAACTTGTGTCTAAATAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR-3UTR CCA 90 bp | AATTGGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGTAAAAACGTGTCCAGGCAGCATTaGTGCTATGTGAATCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: NWVSAMDATSVHQTVGKNVSRQH*CYVNQL Trigger: TAACTGATTCACATAGCACCAATGCTGCCTGGACAC...GTTTTTACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR-3UTR TCA 90 bp | AATTGGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGTAAAAACAGTTTCCATGGATTCTaGGGATTGGCTCTGTATTTG | + |
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Preference number: 2 (lower is better) Translates to: NWVSAMDATSVHQTVGKNSFHGF*GLALYL Trigger: CAAATACAGAGCCAATCCTCAGAATCCATGGAAACT...GTTTTTACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCCAATTGGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGTGATGCTTTCTCTTTTTaGAAACCAAGTCTCTATGAT | + |
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Preference number: 2 (lower is better) Translates to: ESNWVSAMDATSVHQTVGDAFSF*KPSLYD Trigger: ATCATAGAGACTTGGTTTCCAAAAAGAGAAAGCATC...ACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATTGGACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCTAAAGATTCTACAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGCCCTGTTTTGTCACATaGATAGAGACACCAGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: TLKILQKSLKLVSKYIQLPCFVT*IETPVD Trigger: ATCTACTGGTGTCTCTATGCATGTGACAAAACAGGG...CAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTGTAGAATCTTTAGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCTAAAGATTCTACAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAATCACATGACAGTATaGATGTGCTTCAGGTTGATT | + |
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Preference number: 2 (lower is better) Translates to: TLKILQKSLKLVSKYIQLNHMTV*MCFRLI Trigger: AATCAACCTGAAGCACATTCATACTGTCATGTGATT...CAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTGTAGAATCTTTAGGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR TCA 72 bp | TCCCTTCTCCTGTTATTTGTCCTCCCTTCACATGAATaGCCGGTGTCCAGGCAGCATTGGTGCTATGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: SLLLLFVLPSHE*PVSRQHWCYVN Trigger: ATTCACATAGCACCAATGCTGCCTGGACACCGGTCATTCATGTGAAGGGAGGACAAATAACAGGAGAAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR GCA 72 bp | TTTTGGAAACCAAGTCTCTATGATCTGGCCTGCCCTTaGACATGTTTATCCCAGGAATACAGATGTGACTCA | + |
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Preference number: 3 (lower is better) Translates to: FWKPSLYDLACP*TCLSQEYRCDS Trigger: TGAGTCACATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTGGTTTCCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR CCA 72 bp | ACTGTCAGGATACAGAGTCCAATTGGGTCTCTGCTATaGATGCTACATCTGTGCATCAAACTGTGGGTAAAA | + |
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Preference number: 3 (lower is better) Translates to: TVRIQSPIGSLL*MLHLCIKLWVK Trigger: TTTTACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATTGGACTCTGTATCCTGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGCTGTACTTCTGAACCCTTCTCCTGTTATTaGTCCTCCCTTCACATGAAT | + |
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Preference number: 3 (lower is better) Translates to: QKSLKLVSKYIQLSCTSEPFSCY*SSLHMN Trigger: ATTCATGTGAAGGGAGGACAAATAACAGGAGAAGGG...TTCAGAAGTACAGCTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR TCA 72 bp | AGGAATACAGATGTGACTCACCATGCTGGCTGTACCTaGGTAGTAACTGACAATTTTCACCACATAACTCTG | + |
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Preference number: 3 (lower is better) Translates to: RNTDVTHHAGCT*VVTDNFHHITL Trigger: CAGAGTTATGTGGTGAAAATTGTCAGTTACTACTCAGGTACAGCCAGCATGGTGAGTCACATCTGTATTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR GCA 72 bp | TTCTCTTTTTGGAAACCAAGTCTCTATGATCTGGCCTaGCCTTGCACATGTTTATCCCAGGAATACAGATGT | + |
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Preference number: 3 (lower is better) Translates to: FSFWKPSLYDLA*PCTCLSQEYRC Trigger: ACATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTGGTTTCCAAAAAGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR CCA 72 bp | TCTTATGAACACTACTGTCAGGATACAGAGTCCAATTaGGTCTCTGCTATGGATGCTACATCTGTGCATCAA | + |
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Preference number: 3 (lower is better) Translates to: SYEHYCQDTESN*VSAMDATSVHQ Trigger: TTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATTGGACTCTGTATCCTGACAGTAGTGTTCATAAGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGCTGTACTTCTGAATCCATTTTGTACCCATaGATAAATCAATGCCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: QKSLKLVSKYIQLSCTSESILYP*INQCPH Trigger: GTGGGGGCATTGATTTATCAATGGGTACAAAATGGA...TTCAGAAGTACAGCTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| 3UTR TCA 72 bp | ACATTAGTGGCTGCTGAAATTAGTTTCCATGGATTCTaGGGATTGGCTCTGTATTTGATCCACAACCTAATG | + |
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Preference number: 3 (lower is better) Translates to: TLVAAEISFHGF*GLALYLIHNLM Trigger: CATTAGGTTGTGGATCAAATACAGAGCCAATCCTCAGAATCCATGGAAACTAATTTCAGCAGCCACTAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | TTTGGAAACCAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGGAACTGGATCGATCGTaGGTGGGGCAGAGGCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: FGNQVSMIWPALAHVYPRELDRS*VGQRRE Trigger: CTCTCGCCTCTGCCCCACTCACGATCGATCCAGTTC...CCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTGGTTTCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | TGGCCTGCCCTTGCACATGTTTATCCCAGGAATACAGATGTGACTCACCATGCTTTAAGAGGGAGGCTGTaGGCAGGATACACCCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: WPALAHVYPRNTDVTHHALRGRL*AGYTPC Trigger: GCAAGGGGTGTATCCTGCTCACAGCCTCCCTCTTAA...AGCATGGTGAGTCACATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | TTTGGAAACCAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGGATTCAATACTGAGCTaGGCAGAGGTGGGAGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: FGNQVSMIWPALAHVYPRDSILS*AEVGGR Trigger: ACGCCCTCCCACCTCTGCTCAGCTCAGTATTGAATC...CCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTGGTTTCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | GAGTCCAATTGGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGTATCTCTCTACCGCTGTaGGCAGGGCCCAACACACTT | + |
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Preference number: 4 (lower is better) Translates to: ESNWVSAMDATSVHQTVGISLPL*AGPNTL Trigger: AAGTGTGTTGGGCCCTGCTCACAGCGGTAGAGAGAT...ACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATTGGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR GCA 90 bp | GAGTCCAATTGGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGTGCAGGATACACCCCTTaGAGGGAAGCACAGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: ESNWVSAMDATSVHQTVGAGYTP*REAQRT Trigger: TGTCCTCTGTGCTTCCCTGCAAGGGGTGTATCCTGC...ACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATTGGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR GCA 90 bp | TTTGGAAACCAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGCTCTCTACCACTGTGTaGAGGCCCCAGCACACTTCT | + |
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Preference number: 4 (lower is better) Translates to: FGNQVSMIWPALAHVYPRLSTTV*RPQHTS Trigger: AGAAGTGTGCTGGGGCCTGCACACAGTGGTAGAGAG...CCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTGGTTTCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CCA 90 bp | TTTGGAAACCAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGTTCTCGGTGGCATCCTaGAGCAGCAGGGATCCATTG | + |
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Preference number: 4 (lower is better) Translates to: FGNQVSMIWPALAHVYPRFSVAS*SSRDPL Trigger: CAATGGATCCCTGCTGCTCCAGGATGCCACCGAGAA...CCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTGGTTTCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CCA 90 bp | CAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGAATACAGATCTGTGTCTTTCTCGGTaGCATCCTGGAGCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: QVSMIWPALAHVYPRNTDLCLSR*HPGAAG Trigger: CCCTGCTGCTCCAGGATGCCACCGAGAAAGACACAG...ATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | TTTGGAAACCAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGGCAGATTCTGGTTGTTaGAGAGCCACTGGGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: FGNQVSMIWPALAHVYPRADSGC*RATGWR Trigger: TCTCCACCCAGTGGCTCTTCAACAACCAGAATCTGC...CCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTGGTTTCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR GCA 90 bp | TGGCCTGCCCTTGCACATGTTTATCCCAGGAATACAGATGTGACTCACCATGCTTCTCCTTTAGCAGCCTaGTGTGGAACTGGATCGATC | + |
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Preference number: 4 (lower is better) Translates to: WPALAHVYPRNTDVTHHASPLAA*CGTGSI Trigger: GATCGATCCAGTTCCACAGCAGGCTGCTAAAGGAGA...AGCATGGTGAGTCACATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CCA 90 bp | TTTGGAAACCAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGGATTCAACAGTGAGCTaGGCAGAGGTAGGAGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: FGNQVSMIWPALAHVYPRDSTVS*AEVGGF Trigger: GAACCCTCCTACCTCTGCCCAGCTCACTGTTGAATC...CCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTGGTTTCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | CCTAAAGATTCTACAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGCAGCTGAGAGGCAGGTaGGGACCACAGAGCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PKDSTEVSETGEQIHPTEQLRGR*GPQSSA Trigger: TGCAGAGCTCTGTGGTCCTCACCTGCCTCTCAGCTG...CTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTGTAGAATCTTTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | AATTGGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGTAAAAACGATTCCAGTGTCAGCTaGGAGGCAGGTGAGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: NWVSAMDATSVHQTVGKNDSSVS*EAGEDH Trigger: GTGGTCCTCACCTGCCTCTCAGCTGACACTGGAATC...GTTTTTACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | CAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGAATACAGATACATCATCCTCTCTGTaGGCCGCAGATTCTGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: QVSMIWPALAHVYPRNTDTSSSL*AADSGC Trigger: ACAACCAGAATCTGCGGCTCACAGAGAGGATGATGT...ATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | CAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGCTGTACTTCTGAATCACCACAGTCAGGCTaGCTGGGAGACTGGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: QKSLKLVSKYIQLSCTSESPQSG*LGDWSL Trigger: CAAAGACCAGTCTCCCAGTCAGCCTGACTGTGGTGA...TTCAGAAGTACAGCTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CCA 90 bp | AAACTATTTAGACACAAGTTATGTCCACCGGGAAAGGTCAGTCCCTTCTCCTGTCAGTGTCCTTCTGGGTaGCATTGTGGAGCAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: KLFRHKLCPPGKVSPFSCQCPSG*HCGAEE Trigger: CTCTTCTGCTCCACAATGCCACCCAGAAGGACACTG...ACAGGAGAAGGGACTGACCTTTCCCGGTGGACATAACTTGTGTCTAAATAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | CAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGCTGTACTTCTGAAGCACTGATTCAATACTaGGCTGAGCAGAGGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: QKSLKLVSKYIQLSCTSEALIQY*AEQRWE Trigger: CTCCCACCTCTGCTCAGCTCAGTATTGAATCAGTGC...TTCAGAAGTACAGCTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | TGGCCTGCCCTTGCACATGTTTATCCCAGGAATACAGATGTGACTCACCATGCTTCTTCTGGCAGATTGTaGACTTGGAGGAGAACATTT | + |
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Preference number: 4 (lower is better) Translates to: WPALAHVYPRNTDVTHHASSGRL*TWRRTF Trigger: AAATGTTCTCCTCCAAGTTCACAATCTGCCAGAAGA...AGCATGGTGAGTCACATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR GCA 90 bp | CAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGAATACAGATTCAGGAGGGATCCATTaGTGTACACTGTCTCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: QVSMIWPALAHVYPRNTDSGGIH*CTLSLY Trigger: GTAGAGAGACAGTGTACAGCAATGGATCCCTCCTGA...ATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CCA 90 bp | AATTGGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGTAAAAACGTGAGCCGCAGATTCTaGTTGTTGAAGAGCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: NWVSAMDATSVHQTVGKNVSRRF*LLKSHW Trigger: CCAGTGGCTCTTCAACAACCAGAATCTGCGGCTCAC...GTTTTTACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | CCTAAAGATTCTACAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGCTGTGTCCTCCTGGGTaGCATTTTGAATCCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: PKDSTEVSETGEQIHPTELCPPG*HFESTG Trigger: CCCTGTGGATTCAAAATGTCACCCAGGAGGACACAG...CTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTGTAGAATCTTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | CAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGAATACAGATAGGGCCCGGAACACTTaGATTCTTGGCTATTACATA | + |
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Preference number: 4 (lower is better) Translates to: QVSMIWPALAHVYPRNTDRARNT*ILGYYI Trigger: TATGTAATAGCCAAGAATTCAAGTGTTCCGGGCCCT...ATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | CCTAAAGATTCTACAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGAGGGTTCTCGTAGATTaGAAGACAGGTGTCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKDSTEVSETGEQIHPTERVLVD*KTGVHL Trigger: CAGGTGGACACCTGTCTTTCAATCTACGAGAACCCT...CTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTGTAGAATCTTTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | CCTAAAGATTCTACAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGCCAGTGGCAGAAGGGTaGATACAGGCATTTATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKDSTEVSETGEQIHPTEPVAEG*IQAFIW Trigger: CCAGATAAATGCCTGTATTCACCCTTCTGCCACTGG...CTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTGTAGAATCTTTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR GCA 90 bp | CAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGAATACAGATGGCTCTGCTGTACTCTaGTATTTTAAAGATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QVSMIWPALAHVYPRNTDGSAVL*YFKDLG Trigger: ACCCAGATCTTTAAAATAGCAGAGTACAGCAGAGCC...ATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CCA 90 bp | CAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGAATACAGATCTCCACGTTTACTTATaGTTCGTAGGGTGTAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: QVSMIWPALAHVYPRNTDLHVYL*FVGCRI Trigger: GATTCTACACCCTACGAACCATAAGTAAACGTGGAG...ATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR GCA 90 bp | ACCCTAAAGATTCTACAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGACCTGGAGTTGCACATaGGCTACTTCAGCTTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLKILQKSLKLVSKYIQLTWSCT*ATSAFR Trigger: TCTGAAAGCTGAAGTAGCGCATGTGCAACTCCAGGT...CAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTGTAGAATCTTTAGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR GCA 90 bp | AATTGGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGTAAAAACTTTGTAGTGTGTACATaGCTGTGTCTTTCTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NWVSAMDATSVHQTVGKNFVVCT*LCLSRW Trigger: CCACCGAGAAAGACACAGGCATGTACACACTACAAA...GTTTTTACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CCA 90 bp | CAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGCTGTACTTCTGAAGCAGCAGGGATCCATTaGTATACACTATCTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QKSLKLVSKYIQLSCTSEAAGIH*YTLSLF Trigger: GAAGAGAGATAGTGTATACCAATGGATCCCTGCTGC...TTCAGAAGTACAGCTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CCA 90 bp | ACCCTAAAGATTCTACAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGTTGTTGAAGAGCCACTaGGTGGAGATTCCAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLKILQKSLKLVSKYIQLLLKSH*VEIPVS Trigger: TGACACTGGAATCTCCACCCAGTGGCTCTTCAACAA...CAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTGTAGAATCTTTAGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CCA 90 bp | TTTGGAAACCAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGGCTATTTTAAAGATCTaGGTGCTATACATGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: FGNQVSMIWPALAHVYPRAILKI*VLYMDL Trigger: CAAATCCATGTATAGCACCCAGATCTTTAAAATAGC...CCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTGGTTTCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CCA 90 bp | AATTGGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGTAAAAACGCAGAAGAGATCCATTaGAATACACTGTCTCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: NWVSAMDATSVHQTVGKNAEEIH*NTLSLY Trigger: GTAGAGAGACAGTGTATTCCAATGGATCTCTTCTGC...GTTTTTACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | CAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGCTGTACTTCTGAATGCTATACATGGATTTaGACCAGGAAAACATTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKSLKLVSKYIQLSCTSECYTWI*TRKTFA Trigger: TGCGAATGTTTTCCTGGTTCAAATCCATGTATAGCA...TTCAGAAGTACAGCTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | AATTGGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGTAAAAACAAATTTCATGTTTGCTaGCAATGGCTACGCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NWVSAMDATSVHQTVGKNKFHVC*QWLRLC Trigger: ACAAAGGCGTAGCCATTGTCAGCAAACATGAAATTT...GTTTTTACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGAATACAGATATACAGGCATTTATCTaGATTTTCACATGTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QVSMIWPALAHVYPRNTDIQAFI*IFTCAV Trigger: AACAGCACATGTGAAAATCCAGATAAATGCCTGTAT...ATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
||
| CDS-3UTR CCA 90 bp | AATTGGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGTAAAAACACAGGCTTGTATATGTaGATGTGCACATGTATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NWVSAMDATSVHQTVGKNTGLYM*MCTCIP Trigger: AGGAATACATGTGCACATCCACATATACAAGCCTGT...GTTTTTACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR TCA 90 bp | ACCCTAAAGATTCTACAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGTGCACATGTATTCCTTaGGTTTCAAACCGTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLKILQKSLKLVSKYIQLCTCIP*VSNRLF Trigger: AAACAGACGGTTTGAAACTCAAGGAATACATGTGCA...CAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTGTAGAATCTTTAGGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
||
| CDS-3UTR CCA 90 bp | AAACTATTTAGACACAAGTTATGTCCACCGGGAAAGGTCAGTCCCTTCTCCTGTACACACTTGAATTCTTaGCTATTACATATCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLFRHKLCPPGKVSPFSCTHLNS*LLHIWQ Trigger: TTGCCAGATATGTAATAGCCAAGAATTCAAGTGTGT...ACAGGAGAAGGGACTGACCTTTCCCGGTGGACATAACTTGTGTCTAAATAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
||
| CDS CCA 90 bp | ATTTTCTCCTTTAGCAGCCTGCTGTGGAACTGGATCGATCGTGAGTaGGGCAGAGGCGAGAGGGTCACAGCACGTGGAAAAGGAGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IFSFSSLLWNWIDRE*GRGERVTARGKGGV Trigger: GACACCTCCTTTTCCACGTGCTGTGACCCTCTCGCCTCTGCCCCACTCACGATCGATCCAGTTCCACAGCAGGCTGCTAAAGGAGAAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CCA 90 bp | AACTTGGAGGAGAACATTTTCTCCTTTAGCAGCCTGCTGTGGAACTaGATCGATCGTGAGTGGGGCAGAGGCGAGAGGGTCACAGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: NLEENIFSFSSLLWN*IDREWGRGERVTAR Trigger: ACGTGCTGTGACCCTCTCGCCTCTGCCCCACTCACGATCGATCCAGTTCCACAGCAGGCTGCTAAAGGAGAAAATGTTCTCCTCCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CCA 90 bp | ATCCAGTGTCCTTCTGGGTGGCATTGTGGAGCAGAAGAGATCCATTaGAATACACTGTCTCTCTACCACTGTGTGCAGGCCCCAGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: IQCPSGWHCGAEEIH*NTLSLYHCVQAPAH Trigger: GTGTGCTGGGGCCTGCACACAGTGGTAGAGAGACAGTGTATTCCAATGGATCTCTTCTGCTCCACAATGCCACCCAGAAGGACACTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS TCA 90 bp | AGCAAGAAGAAGAACACTTTCTCCTTTAGCAACACTGGGCGGCACTaGTTCAATACTGAGCTGAGCAGAGGTGGGAGGGCGTCCACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SKKKNTFSFSNTGRH*FNTELSRGGRASTG Trigger: ACCTGTGGACGCCCTCCCACCTCTGCTCAGCTCAGTATTGAATCAGTGCCGCCCAGTGTTGCTAAAGGAGAAAGTGTTCTTCTTCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS GCA 90 bp | GGGTCACAGCACGTGGAAAAGGAGGTGTCCACCTGGAGTTGCACATaGGCTACTTCAGCTTTCAGATCTGTACTCAGAGTTCGTAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSQHVEKEVSTWSCT*ATSAFRSVLRVRKV Trigger: CACCTTACGAACTCTGAGTACAGATCTGAAAGCTGAAGTAGCGCATGTGCAACTCCAGGTGGACACCTCCTTTTCCACGTGCTGTGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CCA 90 bp | ATTGTGAACTTGGAGGAGAACATTTTCTCCTTTAGCAGCCTGCTGTaGAACTGGATCGATCGTGAGTGGGGCAGAGGCGAGAGGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: IVNLEENIFSFSSLL*NWIDREWGRGERVT Trigger: TGTGACCCTCTCGCCTCTGCCCCACTCACGATCGATCCAGTTCCACAGCAGGCTGCTAAAGGAGAAAATGTTCTCCTCCAAGTTCACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CCA 90 bp | CACTTTGATGGGGACAACATCATCCTCTCTGTGAGCCGCAGATTCTaGTTGTTGAAGAGCCACTGGGTGGAGATTCCAGTGTCAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HFDGDNIILSVSRRF*LLKSHWVEIPVSAE Trigger: CTCAGCTGACACTGGAATCTCCACCCAGTGGCTCTTCAACAACCAGAATCTGCGGCTCACAGAGAGGATGATGTTGTCCCCATCAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CAA 90 bp | GAGTCCAATTGGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGTGGTGTCCACCTGGAGTaGCACATGCGCTACTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ESNWVSAMDATSVHQTVGGVHLE*HMRYFS Trigger: GCTGAAGTAGCGCATGTGCAACTCCAGGTGGACACC...ACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATTGGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS GCA 90 bp | GGTACAATGTCTCTCTACCACTGTGCACAGGTCCCGTCACACCTCTaGTATAGGTCAGTGAATACAGTGCAATTCCGAGGCTCATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTMSLYHCAQVPSHL*YRSVNTVQFRGSCL Trigger: CAGACATGAGCCTCGGAATTGCACTGTATTCACTGACCTATAGCAGAGGTGTGACGGGACCTGTGCACAGTGGTAGAGAGACATTGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS GCA 90 bp | GAGCAGCAGGGATCCATTGGTATACACTATCTCTCTTCTGCTGTGTaGAGGGCCCCTGATGACAGAATTAAAGGCTCTGCTGTACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EQQGSIGIHYLSSAV*RAPDDRIKGSAVLC Trigger: GCAGAGTACAGCAGAGCCTTTAATTCTGTCATCAGGGGCCCTGCACACAGCAGAAGAGAGATAGTGTATACCAATGGATCCCTGCTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CAA 90 bp | TGGCCTGCCCTTGCACATGTTTATCCCAGGAATACAGATGTGACTCACCATGCTTCCTTCTGGGTGGCATaGTGGAGCAGAAGAGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: WPALAHVYPRNTDVTHHASFWVA*WSRRDP Trigger: TGGATCTCTTCTGCTCCACAATGCCACCCAGAAGGA...AGCATGGTGAGTCACATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS TCA 90 bp | TCCAGCATCTTCCCTCCTGACAGGATCTATTCTGAGTTGGCACTTTaGTGGGGACAACATCATCCTCTCTGTGAGCCGCAGATTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSIFPPDRIYSELAL*WGQHHPLCEPQILV Trigger: AACCAGAATCTGCGGCTCACAGAGAGGATGATGTTGTCCCCATCAAAGTGCCAACTCAGAATAGATCCTGTCAGGAGGGAAGATGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CCA 90 bp | ACCGTTTGTAGTGTGTACATGCCTGTGTCTTTCTCGGTGGCATCCTaGAGCAGCAGGGATCCATTGGTATACACTATCTCTCTTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TVCSVYMPVSFSVAS*SSRDPLVYTISLLL Trigger: CAGCAGAAGAGAGATAGTGTATACCAATGGATCCCTGCTGCTCCAGGATGCCACCGAGAAAGACACAGGCATGTACACACTACAAACGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CAA 90 bp | TGGCCTGCCCTTGCACATGTTTATCCCAGGAATACAGATGTGACTCACCATGCTGCAACCTCGAGATTCTaGAACACAATCGCCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WPALAHVYPRNTDVTHHAATSRF*NTIAPL Trigger: CAAAGGGGCGATTGTGTTCAAGAATCTCGAGGTTGC...AGCATGGTGAGTCACATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CAA 90 bp | TGGCCTGCCCTTGCACATGTTTATCCCAGGAATACAGATGTGACTCACCATGCTGAGGGTTCTCGTAGATaGAAAGACAGGTGTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: WPALAHVYPRNTDVTHHAEGSRR*KDRCPP Trigger: AGGTGGACACCTGTCTTTCAATCTACGAGAACCCTC...AGCATGGTGAGTCACATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CAA 90 bp | CAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGAATACAGATAGCCGCAGATTCTGGTaGTTGAAGAGCCACTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QVSMIWPALAHVYPRNTDSRRFW*LKSHWV Trigger: CACCCAGTGGCTCTTCAACAACCAGAATCTGCGGCT...ATCTGTATTCCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CAA 90 bp | CCTAAAGATTCTACAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGAGCAGGATACACCCCTaGCAGGGAAGCACAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PKDSTEVSETGEQIHPTESRIHP*QGSTED Trigger: GTCCTCTGTGCTTCCCTGCAAGGGGTGTATCCTGCT...CTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTGTAGAATCTTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CAA 90 bp | AAACTATTTAGACACAAGTTATGTCCACCGGGAAAGGTCAGTCCCTTCTCCTGTAACACAATCGCCCCTTaGTACCAGAAAACGGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: KLFRHKLCPPGKVSPFSCNTIAP*YQKTAR Trigger: CCGAGCCGTTTTCTGGTACAAAGGGGCGATTGTGTT...ACAGGAGAAGGGACTGACCTTTCCCGGTGGACATAACTTGTGTCTAAATAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CAA 90 bp | TTTGGAAACCAAGTCTCTATGATCTGGCCTGCCCTTGCACATGTTTATCCCAGGAGCAGCAGGGATCCATaGGTATACACTATCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FGNQVSMIWPALAHVYPRSSRDP*VYTISL Trigger: AAGAGAGATAGTGTATACCAATGGATCCCTGCTGCT...CCTGGGATAAACATGTGCAAGGGCAGGCCAGATCATAGAGACTTGGTTTCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CAA 90 bp | AATTGGGTCTCTGCTATGGATGCTACATCTGTGCATCAAACTGTGGGTAAAAACGGCTGCACCACAGGCTaGTATATGTGGATGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: NWVSAMDATSVHQTVGKNGCTTG*YMWMCT Trigger: TGTGCACATCCACATATACAAGCCTGTGGTGCAGCC...GTTTTTACCCACAGTTTGATGCACAGATGTAGCATCCATAGCAGAGACCCAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CAA 90 bp | CCTAAAGATTCTACAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGCGCAGATTCTGGTTGTaGAAGAGCCACTGGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PKDSTEVSETGEQIHPTERRFWL*KSHWVE Trigger: CTCCACCCAGTGGCTCTTCAACAACCAGAATCTGCG...CTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTGTAGAATCTTTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS TCA 90 bp | ATGGATTTGAACCAGGAAAACATTCGCAGATCTTCTGGCAGATTGTaGACTTGGAGGAGAACATTTTCTCCTTTAGCAGCCTGCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: MDLNQENIRRSSGRL*TWRRTFSPLAACCG Trigger: TCCACAGCAGGCTGCTAAAGGAGAAAATGTTCTCCTCCAAGTTCACAATCTGCCAGAAGATCTGCGAATGTTTTCCTGGTTCAAATCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS TCA 90 bp | TTGGGTGGCACTGATTCAATAACGAGCTGGCCAGTGGCAGAAGGGTaGATACAGGCATTTATCTGGATTTTCACATGTGCTGTTTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: LGGTDSITSWPVAEG*IQAFIWIFTCAVSI Trigger: AATTGAAACAGCACATGTGAAAATCCAGATAAATGCCTGTATTCACCCTTCTGCCACTGGCCAGCTCGTTATTGAATCAGTGCCACCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGCTGTACTTCTGAAAACACAATCGCCCCTTaGTACCAGAAAATGGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: QKSLKLVSKYIQLSCTSENTIAP*YQKMAR Trigger: TCGAGCCATTTTCTGGTACAAAGGGGCGATTGTGTT...TTCAGAAGTACAGCTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
||
| CDS TCA 90 bp | GTGTGCAGGCCCCAGCACACTTCTATTACTAGTTATTATATTCCGTaGAATTTCATGTTTGCTGACAATGGCTACGCCTTTGTACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VCRPQHTSITSYYIP*NFMFADNGYAFVPG Trigger: TCCTGGTACAAAGGCGTAGCCATTGTCAGCAAACATGAAATTTCACGGAATATAATAACTAGTAATAGAAGTGTGCTGGGGCCTGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
||
| CDS CCA 90 bp | GAACACAATCGCCCCTTTGTACCAGAAAATGGCTCGAAGATTCTCTaGAAGATTTCGAGCAAGAAGAAGAACACTTTCTCCTTTAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: EHNRPFVPENGSKIL*KISSKKKNTFSFSN Trigger: GTTGCTAAAGGAGAAAGTGTTCTTCTTCTTGCTCGAAATCTTCCAGAGAATCTTCGAGCCATTTTCTGGTACAAAGGGGCGATTGTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
||
| CDS CCA 90 bp | GGTGCTATACATGGATTTGAACCAGGAAAACATTCGCAGATCTTCTaGCAGATTGTGAACTTGGAGGAGAACATTTTCTCCTTTAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GAIHGFEPGKHSQIF*QIVNLEENIFSFSS Trigger: GCTGCTAAAGGAGAAAATGTTCTCCTCCAAGTTCACAATCTGCCAGAAGATCTGCGAATGTTTTCCTGGTTCAAATCCATGTATAGCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
||
| CDS CCA 90 bp | GTCTGTTTAAGGTTAATAAGGTGTATAATCCAGTGTCCTTCTGGGTaGCATTGTGGAGCAGAAGAGATCCATTGGAATACACTGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VCLRLIRCIIQCPSG*HCGAEEIHWNTLSL Trigger: GAGAGACAGTGTATTCCAATGGATCTCTTCTGCTCCACAATGCCACCCAGAAGGACACTGGATTATACACCTTATTAACCTTAAACAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
||
| CDS-3UTR CAA 90 bp | AAACTATTTAGACACAAGTTATGTCCACCGGGAAAGGTCAGTCCCTTCTCCTGTGTGCTATACATGGATTaGAACCAGGAAAACATTCGC | + |
|
Preference number: 5 (lower is better) Translates to: KLFRHKLCPPGKVSPFSCVLYMD*NQENIR Trigger: GCGAATGTTTTCCTGGTTCAAATCCATGTATAGCAC...ACAGGAGAAGGGACTGACCTTTCCCGGTGGACATAACTTGTGTCTAAATAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGCTGTACTTCTGAACGTGAAATTTCATGTTaGCTGACAATGGCTACGCCT | + |
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Preference number: 5 (lower is better) Translates to: QKSLKLVSKYIQLSCTSEREISC*LTMATP Trigger: AGGCGTAGCCATTGTCAGCAAACATGAAATTTCACG...TTCAGAAGTACAGCTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CAA 90 bp | CCTAAAGATTCTACAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGAGATGTCTGTCACCCCTTaGTACCAGATAAAGCCTAGA | + |
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Preference number: 5 (lower is better) Translates to: PKDSTEVSETGEQIHPTEMSVTP*YQIKPR Trigger: TCTAGGCTTTATCTGGTACAAAGGGGTGACAGACAT...CTCAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTGTAGAATCTTTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS-3UTR CAA 90 bp | ACCCTAAAGATTCTACAGAAGTCTCTGAAACTGGTGAGCAAATACATCCAACTGGTGCACATGTATTCCTaGAGTTTCAAACCGTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: TLKILQKSLKLVSKYIQLVHMYS*SFKPSV Trigger: AACAGACGGTTTGAAACTCAAGGAATACATGTGCAC...CAGTTGGATGTATTTGCTCACCAGTTTCAGAGACTTCTGTAGAATCTTTAGGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CCA 90 bp | ATGACAGAATTAAAGGCTCTGCTGTACTCTGCTATTTTAAAGATCTaGGTGCTATACATGGATTTGAACCAGGAAAACATTCGCAGATCT | + |
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Preference number: 5 (lower is better) Translates to: MTELKALLYSAILKI*VLYMDLNQENIRRS Trigger: AGATCTGCGAATGTTTTCCTGGTTCAAATCCATGTATAGCACCCAGATCTTTAAAATAGCAGAGTACAGCAGAGCCTTTAATTCTGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS TCA 72 bp | TGGTGGGCAGGAGCCAGCAGGTTAAGAGGGAGGCTGTaGGCAGGATACACCCCTTGCAGGGAAGCACAGAGG | + |
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Preference number: 6 (lower is better) Translates to: WWAGASRLRGRL*AGYTPCREAQR Trigger: CCTCTGTGCTTCCCTGCAAGGGGTGTATCCTGCTCACAGCCTCCCTCTTAACCTGCTGGCTCCTGCCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS TCA 72 bp | GTTGAAGAGCCACTGGGTGGAGATTCCAGTGTCAGCTaGGAGGCAGGTGAGGACCACAGAGCTCTGCACTCT | + |
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Preference number: 6 (lower is better) Translates to: VEEPLGGDSSVS*EAGEDHRALHS Trigger: AGAGTGCAGAGCTCTGTGGTCCTCACCTGCCTCTCAGCTGACACTGGAATCTCCACCCAGTGGCTCTTCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CCA 72 bp | TTTAGCAGCCTGCTGTGGAACTGGATCGATCGTGAGTaGGGCAGAGGCGAGAGGGTCACAGCACGTGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: FSSLLWNWIDRE*GRGERVTARGK Trigger: TTTTCCACGTGCTGTGACCCTCTCGCCTCTGCCCCACTCACGATCGATCCAGTTCCACAGCAGGCTGCTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS TCA 72 bp | AGTGAGCTGGGCAGAGGTAGGAGGGTTCTCGTAGATTaGAAGACAGGTGTCCACCTGGAGTTGCACATGCGC | + |
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Preference number: 6 (lower is better) Translates to: SELGRGRRVLVD*KTGVHLELHMR Trigger: GCGCATGTGCAACTCCAGGTGGACACCTGTCTTTCAATCTACGAGAACCCTCCTACCTCTGCCCAGCTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CCA 72 bp | GAGAACATTTTCTCCTTTAGCAGCCTGCTGTGGAACTaGATCGATCGTGAGTGGGGCAGAGGCGAGAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: ENIFSFSSLLWN*IDREWGRGERV Trigger: GACCCTCTCGCCTCTGCCCCACTCACGATCGATCCAGTTCCACAGCAGGCTGCTAAAGGAGAAAATGTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CAA 90 bp | ATGCCTGTGTCTTTCTCGGTGGCATCCTGGAGCAGCAGGGATCCATaGGTATACACTATCTCTCTTCTGCTGTGTGCAGGGCCCCTGATG | + |
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Preference number: 6 (lower is better) Translates to: MPVSFSVASWSSRDP*VYTISLLLCAGPLM Trigger: CATCAGGGGCCCTGCACACAGCAGAAGAGAGATAGTGTATACCAATGGATCCCTGCTGCTCCAGGATGCCACCGAGAAAGACACAGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CAA 90 bp | GATGGGGACAACATCATCCTCTCTGTGAGCCGCAGATTCTGGTTGTaGAAGAGCCACTGGGTGGAGATTCCAGTGTCAGCTGAGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: DGDNIILSVSRRFWL*KSHWVEIPVSAERQ Trigger: CTGCCTCTCAGCTGACACTGGAATCTCCACCCAGTGGCTCTTCAACAACCAGAATCTGCGGCTCACAGAGAGGATGATGTTGTCCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CCA 72 bp | TTGGAGGAGAACATTTTCTCCTTTAGCAGCCTGCTGTaGAACTGGATCGATCGTGAGTGGGGCAGAGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: LEENIFSFSSLL*NWIDREWGRGE Trigger: CTCGCCTCTGCCCCACTCACGATCGATCCAGTTCCACAGCAGGCTGCTAAAGGAGAAAATGTTCTCCTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CAA 72 bp | CTACGGCTGTGGGCAGGGCCCGGAACACTTGAATTCTaGGCTATTACATACCGTGCAACCTCAAGGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LRLWAGPGTLEF*AITYRATSRSL Trigger: CAAGGACCTTGAGGTTGCACGGTATGTAATAGCCAAGAATTCAAGTGTTCCGGGCCCTGCCCACAGCCGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS TCA 72 bp | AAGAACACTTTCTCCTTTAGCAACACTGGGCGGCACTaGTTCAATACTGAGCTGAGCAGAGGTGGGAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: KNTFSFSNTGRH*FNTELSRGGRA Trigger: CGCCCTCCCACCTCTGCTCAGCTCAGTATTGAATCAGTGCCGCCCAGTGTTGCTAAAGGAGAAAGTGTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CCA 72 bp | AGGGATCCATTGCTGTACACTGTCTCTCTACGGCTGTaGGCAGGGCCCGGAACACTTGAATTCTTGGCTATT | + |
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Preference number: 6 (lower is better) Translates to: RDPLLYTVSLRL*AGPGTLEFLAI Trigger: AATAGCCAAGAATTCAAGTGTTCCGGGCCCTGCCCACAGCCGTAGAGAGACAGTGTACAGCAATGGATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CAA 72 bp | CGTGCAACCTCAAGGTCCTTGAACACAATCGCCCCTTaGTACCAGAAAACGGCTCGGAGATTCTCTGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: RATSRSLNTIAP*YQKTARRFSGR Trigger: TCTCCCAGAGAATCTCCGAGCCGTTTTCTGGTACAAAGGGGCGATTGTGTTCAAGGACCTTGAGGTTGCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CAA 90 bp | TTTGATGGGGACAACATCATCCTCTCTGTGAGCCGCAGATTCTGGTaGTTGAAGAGCCACTGGGTGGAGATTCCAGTGTCAGCTGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: FDGDNIILSVSRRFW*LKSHWVEIPVSAER Trigger: CCTCTCAGCTGACACTGGAATCTCCACCCAGTGGCTCTTCAACAACCAGAATCTGCGGCTCACAGAGAGGATGATGTTGTCCCCATCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS TCA 72 bp | TTCCCTCCTGACAGGATCTATTCTGAGTTGGCACTTTaGTGGGGACAACATCATCCTCTCTGTGAGCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: FPPDRIYSELAL*WGQHHPLCEPQ Trigger: CTGCGGCTCACAGAGAGGATGATGTTGTCCCCATCAAAGTGCCAACTCAGAATAGATCCTGTCAGGAGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS GCA 72 bp | ACTCTGACTGTGGTGTCCGTGACTCTCATGAAGGGCTaGACCACAGGCTTGTATATGTGGATGTGCACATGT | + |
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Preference number: 6 (lower is better) Translates to: TLTVVSVTLMKG*TTGLYMWMCTC Trigger: ACATGTGCACATCCACATATACAAGCCTGTGGTGCAGCCCTTCATGAGAGTCACGGACACCACAGTCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CCA 72 bp | CCGTTTGTAGTGTGTACATGCCTGTGTCTTTCTCGGTaGCATCCTGGAGCAGCAGGGATCCATTGGTATACA | + |
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Preference number: 6 (lower is better) Translates to: PFVVCTCLCLSR*HPGAAGIHWYT Trigger: TGTATACCAATGGATCCCTGCTGCTCCAGGATGCCACCGAGAAAGACACAGGCATGTACACACTACAAACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS GCA 72 bp | CACGTGGAAAAGGAGGTGTCCACCTGGAGTTGCACATaGGCTACTTCAGCTTTCAGATCTGTACTCAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: HVEKEVSTWSCT*ATSAFRSVLRV Trigger: AACTCTGAGTACAGATCTGAAAGCTGAAGTAGCGCATGTGCAACTCCAGGTGGACACCTCCTTTTCCACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CCA 72 bp | AGTGTGTACATGCCTGTGTCTTTCTCGGTGGCATCCTaGAGCAGCAGGGATCCATTGGTATACACTATCTCT | + |
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Preference number: 6 (lower is better) Translates to: SVYMPVSFSVAS*SSRDPLVYTIS Trigger: AGAGATAGTGTATACCAATGGATCCCTGCTGCTCCAGGATGCCACCGAGAAAGACACAGGCATGTACACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS GCA 72 bp | GGATCCATTGGTATACACTATCTCTCTTCTGCTGTGTaGAGGGCCCCTGATGACAGAATTAAAGGCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GSIGIHYLSSAV*RAPDDRIKGSA Trigger: AGCAGAGCCTTTAATTCTGTCATCAGGGGCCCTGCACACAGCAGAAGAGAGATAGTGTATACCAATGGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CAA 90 bp | GTCAGTGAATACAGTGCAATTCCGAGGCTCATGTCTGTCACCCCTTaGTACCAGATAAAGCCTAGAAGATTCTCTGGCAGATTGTCAACC | + |
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Preference number: 6 (lower is better) Translates to: VSEYSAIPRLMSVTP*YQIKPRRFSGRLST Trigger: GGTTGACAATCTGCCAGAGAATCTTCTAGGCTTTATCTGGTACAAAGGGGTGACAGACATGAGCCTCGGAATTGCACTGTATTCACTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CAA 72 bp | TACAGTGCAATTCCGAGGCTCATGTCTGTCACCCCTTaGTACCAGATAAAGCCTAGAAGATTCTCTGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: YSAIPRLMSVTP*YQIKPRRFSGR Trigger: TCTGCCAGAGAATCTTCTAGGCTTTATCTGGTACAAAGGGGTGACAGACATGAGCCTCGGAATTGCACTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CAA 72 bp | CTGGCAACCTCGAGATTCTTGAACACAATCGCCCCTTaGTACCAGAAAATGGCTCGAAGATTCTCTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LATSRFLNTIAP*YQKMARRFSGR Trigger: TCTTCCAGAGAATCTTCGAGCCATTTTCTGGTACAAAGGGGCGATTGTGTTCAAGAATCTCGAGGTTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS TCA 72 bp | AGGGATCCATTACTATACATTATCTCTCTACCGCTGTaGGCAGGGCCCAACACACTTGAATTCTTGGCTATT | + |
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Preference number: 6 (lower is better) Translates to: RDPLLYIISLPL*AGPNTLEFLAI Trigger: AATAGCCAAGAATTCAAGTGTGTTGGGCCCTGCTCACAGCGGTAGAGAGATAATGTATAGTAATGGATCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS TCA 72 bp | AACCAGGAAAACATTCGCAGATCTTCTGGCAGATTGTaGACTTGGAGGAGAACATTTTCTCCTTTAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: NQENIRRSSGRL*TWRRTFSPLAA Trigger: GGCTGCTAAAGGAGAAAATGTTCTCCTCCAAGTTCACAATCTGCCAGAAGATCTGCGAATGTTTTCCTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS TCA 72 bp | ACTGATTCAATAACGAGCTGGCCAGTGGCAGAAGGGTaGATACAGGCATTTATCTGGATTTTCACATGTGCT | + |
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Preference number: 6 (lower is better) Translates to: TDSITSWPVAEG*IQAFIWIFTCA Trigger: AGCACATGTGAAAATCCAGATAAATGCCTGTATTCACCCTTCTGCCACTGGCCAGCTCGTTATTGAATCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CAA 72 bp | AATAAGGTGTATAATCCAGTGTCCTTCTGGGTGGCATaGTGGAGCAGAAGAGATCCATTGGAATACACTGTC | + |
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Preference number: 6 (lower is better) Translates to: NKVYNPVSFWVA*WSRRDPLEYTV Trigger: GACAGTGTATTCCAATGGATCTCTTCTGCTCCACAATGCCACCCAGAAGGACACTGGATTATACACCTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CAA 90 bp | ATTACATATCTGGCAACCTCGAGATTCTTGAACACAATCGCCCCTTaGTACCAGAAAATGGCTCGAAGATTCTCTGGAAGATTTCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: ITYLATSRFLNTIAP*YQKMARRFSGRFRA Trigger: TGCTCGAAATCTTCCAGAGAATCTTCGAGCCATTTTCTGGTACAAAGGGGCGATTGTGTTCAAGAATCTCGAGGTTGCCAGATATGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS GCA 72 bp | AGATCCATTGGAATACACTGTCTCTCTACCACTGTGTaGAGGCCCCAGCACACTTCTATTACTAGTTATTAT | + |
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Preference number: 6 (lower is better) Translates to: RSIGIHCLSTTV*RPQHTSITSYY Trigger: ATAATAACTAGTAATAGAAGTGTGCTGGGGCCTGCACACAGTGGTAGAGAGACAGTGTATTCCAATGGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CCA 72 bp | CATGGATTTGAACCAGGAAAACATTCGCAGATCTTCTaGCAGATTGTGAACTTGGAGGAGAACATTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: HGFEPGKHSQIF*QIVNLEENIFS Trigger: GGAGAAAATGTTCTCCTCCAAGTTCACAATCTGCCAGAAGATCTGCGAATGTTTTCCTGGTTCAAATCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CCA 72 bp | AGGTTAATAAGGTGTATAATCCAGTGTCCTTCTGGGTaGCATTGTGGAGCAGAAGAGATCCATTGGAATACA | + |
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Preference number: 6 (lower is better) Translates to: RLIRCIIQCPSG*HCGAEEIHWNT Trigger: TGTATTCCAATGGATCTCTTCTGCTCCACAATGCCACCCAGAAGGACACTGGATTATACACCTTATTAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CAA 72 bp | CGTGAAATTTCATGTTTGCTGACAATGGCTACGCCTTaGTACCAGGAAAAGGATCGAAGGTTTTCTGGCATA | + |
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Preference number: 6 (lower is better) Translates to: REISCLLTMATP*YQEKDRRFSGI Trigger: TATGCCAGAAAACCTTCGATCCTTTTCCTGGTACAAAGGCGTAGCCATTGTCAGCAAACATGAAATTTCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CAA 90 bp | TTTAAGGTTAATAAGGTGTATAATCCAGTGTCCTTCTGGGTGGCATaGTGGAGCAGAAGAGATCCATTGGAATACACTGTCTCTCTACCA | + |
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Preference number: 6 (lower is better) Translates to: FKVNKVYNPVSFWVA*WSRRDPLEYTVSLP Trigger: TGGTAGAGAGACAGTGTATTCCAATGGATCTCTTCTGCTCCACAATGCCACCCAGAAGGACACTGGATTATACACCTTATTAACCTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CCA 72 bp | TTTAAGGTTAATAAGGTGTATAATCCAGTGTCCTTCTaGGTGGCATTGTGGAGCAGAAGAGATCCATTGGAA | + |
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Preference number: 6 (lower is better) Translates to: FKVNKVYNPVSF*VALWSRRDPLE Trigger: TTCCAATGGATCTCTTCTGCTCCACAATGCCACCCAGAAGGACACTGGATTATACACCTTATTAACCTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS TCA 72 bp | TACCAGGAAAAGGATCGAAGGTTTTCTGGCATATTATaGACAAGTAGGAGAACATCTCTCCCTTCAACAACA | + |
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Preference number: 6 (lower is better) Translates to: YQEKDRRFSGIL*TSRRTSLPSTT Trigger: TGTTGTTGAAGGGAGAGATGTTCTCCTACTTGTTCATAATATGCCAGAAAACCTTCGATCCTTTTCCTGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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| CDS CAA 72 bp | TCTGCTATTTTAAAGATCTGGGTGCTATACATGGATTaGAACCAGGAAAACATTCGCAGATCTTCTGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SAILKIWVLYMD*NQENIRRSSGR Trigger: TCTGCCAGAAGATCTGCGAATGTTTTCCTGGTTCAAATCCATGTATAGCACCCAGATCTTTAAAATAGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108491.8 |
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