Pregenerated sensors for CEACAM19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049848Ensembl transcript IDs: ENSMUST00000052605.8
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTaGGCTCTGGGCAGGCGCTCTACAGCTGTGCTGTACAGTCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: AHLQSRAPMFSVPHG*ALGRRSTAVLYSPS Trigger: ACTGGGACTGTACAGCACAGCTGTAGAGCGCCTGCCCAGAGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CCA 90 bp | TGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGGGCTCTaGGCAGGCGCTCTACAGCTGTGCTGTACAGTCCCAGTCCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: CRAAPPCSQSLTGGL*AGALQLCCTVPVLC Trigger: ACAGAGGACTGGGACTGTACAGCACAGCTGTAGAGCGCCTGCCCAGAGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CCA 90 bp | CCGCTGGCCTTGGGTGGGGCAGGAGCCTGCTTTCTTAGAGGCAGGTaGCCCAAGAGGCACAGACTGAAGGTTGTTGGGACATTGGGGATC | + |
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Preference number: 1 (lower is better) Translates to: PLALGGAGACFLRGR*PKRHRLKVVGTLGI Trigger: GATCCCCAATGTCCCAACAACCTTCAGTCTGTGCCTCTTGGGCCACCTGCCTCTAAGAAAGCAGGCTCCTGCCCCACCCAAGGCCAGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR GCA 90 bp | TCTCAGTCCCTCACGGGTGGGCTCTGGGCAGGCGCTCTACAGCTGTaGTGTACAGTCCCAGTCCTCTGTGTGGCTGATTTTGAAGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: SQSLTGGLWAGALQL*CTVPVLCVADFEAG Trigger: ACCTGCTTCAAAATCAGCCACACAGAGGACTGGGACTGTACAGCACAGCTGTAGAGCGCCTGCCCAGAGCCCACCCGTGAGGGACTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR TCA 90 bp | GTCACTGATCCTTGGGCCCAGAGGCCACAGGGTGGGGCAGTTTCTTaGGCTTTCAAGCTTCCAGAGACTTCCTCCAGGCGTGTCACGTGT | + |
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Preference number: 1 (lower is better) Translates to: VTDPWAQRPQGGAVS*AFKLPETSSRRVTC Trigger: ACACGTGACACGCCTGGAGGAAGTCTCTGGAAGCTTGAAAGCTCAAGAAACTGCCCCACCCTGTGGCCTCTGGGCCCAAGGATCAGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CCA 90 bp | CCCATGTGTCCTTTCTATAGGTGTGAAGCCCTGAGGGGTGGGGTCTaGAAGTTGAGATTCTGTCTTCTGTGCAGGCTGGGCCGAGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: PMCPFYRCEALRGGV*KLRFCLLCRLGRGS Trigger: GGACCCTCGGCCCAGCCTGCACAGAAGACAGAATCTCAACTTCCAGACCCCACCCCTCAGGGCTTCACACCTATAGAAAGGACACATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CCA 90 bp | ATGGTGGAGTACCAAGGCCTTCTTCCCATCACTCAAATACCTGGATaGGGCCGCTGGCCTTGGGTGGGGCAGGAGCCTGCTTTCTTAGAG | + |
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Preference number: 1 (lower is better) Translates to: MVEYQGLLPITQIPG*GRWPWVGQEPAFLE Trigger: CTCTAAGAAAGCAGGCTCCTGCCCCACCCAAGGCCAGCGGCCCCATCCAGGTATTTGAGTGATGGGAAGAAGGCCTTGGTACTCCACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CCA 90 bp | GGGCAGGCGCTCTACAGCTGTGCTGTACAGTCCCAGTCCTCTGTGTaGCTGATTTTGAAGCAGGTCAGGGGTCGGGCAGTTAATTTGCCC | + |
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Preference number: 1 (lower is better) Translates to: GQALYSCAVQSQSSV*LILKQVRGRAVNLP Trigger: GGGCAAATTAACTGCCCGACCCCTGACCTGCTTCAAAATCAGCCACACAGAGGACTGGGACTGTACAGCACAGCTGTAGAGCGCCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR TCA 90 bp | CTGACTGACAGGGCTAGTCACTGTGACTGGAGTCTGGAGGGAAAGTaGTGGCGCACCTGGACTACTGGGCACTGCTTGCACCCACATTTC | + |
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Preference number: 1 (lower is better) Translates to: LTDRASHCDWSLEGK*WRTWTTGHCLHPHF Trigger: GAAATGTGGGTGCAAGCAGTGCCCAGTAGTCCAGGTGCGCCATCACTTTCCCTCCAGACTCCAGTCACAGTGACTAGCCCTGTCAGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR TCA 90 bp | GGTTGTCAGTCTCTCATCCCGAGAGGCACTGACTCCATGTCATGCTaGGTCTATGGCAGAGCCCATCTTGCCAGTTTCCCTGCAGCGTTG | + |
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Preference number: 1 (lower is better) Translates to: GCQSLIPRGTDSMSC*VYGRAHLASFPAAL Trigger: CAACGCTGCAGGGAAACTGGCAAGATGGGCTCTGCCATAGACTCAGCATGACATGGAGTCAGTGCCTCTCGGGATGAGAGACTGACAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CCA 90 bp | TGGCCCAAGAGGCACAGACTGAAGGTTGTTGGGACATTGGGGATCTaGGGTTGTCAGTCTCTCATCCCGAGAGGCACTGACTCCATGTCA | + |
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Preference number: 1 (lower is better) Translates to: WPKRHRLKVVGTLGI*GCQSLIPRGTDSMS Trigger: TGACATGGAGTCAGTGCCTCTCGGGATGAGAGACTGACAACCCCAGATCCCCAATGTCCCAACAACCTTCAGTCTGTGCCTCTTGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR GCA 90 bp | TCTCTGAAGAGGTTTGACCCACAGGTTGAGAACCTCCGGTGGTTGTaGGGCCTTCCTGGTAGTGCTTTCTTCCCAAGGAAAGGGCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: SLKRFDPQVENLRWL*GLPGSAFFPRKGLL Trigger: CAGAAGCCCTTTCCTTGGGAAGAAAGCACTACCAGGAAGGCCGCACAACCACCGGAGGTTCTCAACCTGTGGGTCAAACCTCTTCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CCA 90 bp | CAACTACAGTTTATCATCTTACAATCAAACGCCGTGAGTCCAAAGTaGCCGTCACTGATCCTTGGGCCCAGAGGCCACAGGGTGGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: QLQFIILQSNAVSPK*PSLILGPRGHRVGQ Trigger: CTGCCCCACCCTGTGGCCTCTGGGCCCAAGGATCAGTGACGGCCACTTTGGACTCACGGCGTTTGATTGTAAGATGATAAACTGTAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CCA 90 bp | TTTGACTCTCTGAAGAGGTTTGACCCACAGGTTGAGAACCTCCGGTaGTTGTGCGGCCTTCCTGGTAGTGCTTTCTTCCCAAGGAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: FDSLKRFDPQVENLR*LCGLPGSAFFPRKG Trigger: CCCTTTCCTTGGGAAGAAAGCACTACCAGGAAGGCCGCACAACCACCGGAGGTTCTCAACCTGTGGGTCAAACCTCTTCAGAGAGTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR TCA 90 bp | CACATGGTTGATCTGGATGGCCAGCTTAGTCATGCACTGGTTGTATaGGATCAAAGCCTGGGGAAGTCCCTCCGAGGGGCTCATTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: HMVDLDGQLSHALVV*DQSLGKSLRGAHLH Trigger: ATGCAAATGAGCCCCTCGGAGGGACTTCCCCAGGCTTTGATCTCATACAACCAGTGCATGACTAAGCTGGCCATCCAGATCAACCATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR TCA 90 bp | AAAGGGTCAGGAGAACTCAGCTTTAGGTGGGCTCATTCAGGAACCTaGCTGACAGGGCTAGTCACTGTGACTGGAGTCTGGAGGGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: KGSGELSFRWAHSGT*LTGLVTVTGVWRES Trigger: ACTTTCCCTCCAGACTCCAGTCACAGTGACTAGCCCTGTCAGTCAGGTTCCTGAATGAGCCCACCTAAAGCTGAGTTCTCCTGACCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CCA 90 bp | TTCACTCCTTCTGTCTCCTCTGGCCCTCAGGTCACATGGTTGATCTaGATGGCCAGCTTAGTCATGCACTGGTTGTATGAGATCAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: FTPSVSSGPQVTWLI*MASLVMHWLYEIKA Trigger: GGCTTTGATCTCATACAACCAGTGCATGACTAAGCTGGCCATCCAGATCAACCATGTGACCTGAGGGCCAGAGGAGACAGAAGGAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR TCA 90 bp | AGGTCAGGGGTCGGGCAGTTAATTTGCCCAAGGCTGTTATCTTCCTaGCAGGTGTTTGGCTCTATGAGCAGTGGCTCTCAACCTTTGTAT | + |
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Preference number: 1 (lower is better) Translates to: RSGVGQLICPRLLSS*QVFGSMSSGSQPLY Trigger: ATACAAAGGTTGAGAGCCACTGCTCATAGAGCCAAACACCTGTCAGGAAGATAACAGCCTTGGGCAAATTAACTGCCCGACCCCTGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CCA 90 bp | CGGGCAGTTAATTTGCCCAAGGCTGTTATCTTCCTGACAGGTGTTTaGCTCTATGAGCAGTGGCTCTCAACCTTTGTATTGCTGAGACCC | + |
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Preference number: 1 (lower is better) Translates to: RAVNLPKAVIFLTGV*LYEQWLSTFVLLRP Trigger: GGGTCTCAGCAATACAAAGGTTGAGAGCCACTGCTCATAGAGCCAAACACCTGTCAGGAAGATAACAGCCTTGGGCAAATTAACTGCCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CCA 90 bp | TCATTTGCATATTGCCAATCAGCTGTGGTTGTAACGTCCCCTCCCTaGGATCCTTCAGCATCCCCATTTCCTGTTTGCTGGAACAACCTG | + |
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Preference number: 1 (lower is better) Translates to: SFAYCQSAVVVTSPP*DPSASPFPVCWNNL Trigger: CAGGTTGTTCCAGCAAACAGGAAATGGGGATGCTGAAGGATCCCAGGGAGGGGACGTTACAACCACAGCTGATTGGCAATATGCAAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CCA 90 bp | CTTCCTGGTAGTGCTTTCTTCCCAAGGAAAGGGCTTCTGGGTAACTaGTTAAAGCTGGATGGAATTTTATGGTGGAGTACCAAGGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: LPGSAFFPRKGLLGN*LKLDGILWWSTKAF Trigger: GAAGGCCTTGGTACTCCACCATAAAATTCCATCCAGCTTTAACCAGTTACCCAGAAGCCCTTTCCTTGGGAAGAAAGCACTACCAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR GCA 90 bp | CTACAGCATCCCCAGGACCCCAACTCTCTCACTTGCTCTGTTTCTTaGAGGGAAGACCTCTCTGTGAACTGTTTATACAACTTCCATTTT | + |
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Preference number: 1 (lower is better) Translates to: LQHPQDPNSLTCSVS*REDLSVNCLYNFHF Trigger: AAAATGGAAGTTGTATAAACAGTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGAGAGAGTTGGGGTCCTGGGGATGCTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR GCA 90 bp | CTACTGGGCACTGCTTGCACCCACATTTCATTAATCAGAGCTTTTTaGATTCTAATTAGGGGCTGTGGAAATGCAATTCCACCTAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: LLGTACTHISLIRAF*ILIRGCGNAIPPKA Trigger: GGCCTTAGGTGGAATTGCATTTCCACAGCCCCTAATTAGAATGCAAAAAGCTCTGATTAATGAAATGTGGGTGCAAGCAGTGCCCAGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CCA 90 bp | AGCATCCCCATTTCCTGTTTGCTGGAACAACCTGCTATCAAAGAGTaGCTTAAAACAACTACAGTTTATCATCTTACAATCAAACGCCGT | + |
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Preference number: 1 (lower is better) Translates to: SIPISCLLEQPAIKE*LKTTTVYHLTIKRR Trigger: ACGGCGTTTGATTGTAAGATGATAAACTGTAGTTGTTTTAAGCCACTCTTTGATAGCAGGTTGTTCCAGCAAACAGGAAATGGGGATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR TCA 90 bp | CCAACTCTCTCACTTGCTCTGTTTCTTGCAGGGAAGACCTCTCTGTaGACTGTTTATACAACTTCCATTTTTGATTATATTGAACTTAAC | + |
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Preference number: 1 (lower is better) Translates to: PTLSLALFLAGKTSL*TVYTTSIFDYIELN Trigger: GTTAAGTTCAATATAATCAAAAATGGAAGTTGTATAAACAGTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGAGAGAGTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCCATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGGGCTTGGGGCCGCTGGCCTTaGGTGGGGCAGGAGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: AAHLQSRAPMFSVPHGWAWGRWP*VGQEPA Trigger: AGCAGGCTCCTGCCCCACCCAAGGCCAGCGGCCCCA...AGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATGGGCTGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGCCCATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGGGCTGGTGGGGCAGGAGCCTaGTTTCTTAGAGGCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: AAHLQSRAPMFSVPHGWAGGAGA*FLRGRW Trigger: CCACCTGCCTCTAAGAAAGCAGGCTCCTGCCCCACC...AGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATGGGCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCCCATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGGGCTATAGGTGTGAAGCCCTaGGGGGTGGGGTCTGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: AAHLQSRAPMFSVPHGWAIGVKP*GVGSGS Trigger: ACTTCCAGACCCCACCCCTCAGGGCTTCACACCTAT...AGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATGGGCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGGGCTCTGGGCTTTCTTAGAGGCAGGTaGCCCAAGAGGCACAGACTG | + |
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Preference number: 2 (lower is better) Translates to: HLQSRAPMFSVPHGWALGFLRGR*PKRHRL Trigger: CAGTCTGTGCCTCTTGGGCCACCTGCCTCTAAGAAA...GCCCAGAGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CAA 90 bp | AGGCCTTCTTCCCATCACTCAAATACCTGGATGGGGCCGCTGGCCTaGGGTGGGGCAGGAGCCTGCTTTCTTAGAGGCAGGTGGCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: RPSSHHSNTWMGPLA*GGAGACFLRGRWPK Trigger: CTTGGGCCACCTGCCTCTAAGAAAGCAGGCTCCTGCCCCACCCAAGGCCAGCGGCCCCATCCAGGTATTTGAGTGATGGGAAGAAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGCAGCCCATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGCAGACTGAAGGTTGTTaGGACATTGGGGATCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: ASSPSAEPRPHVLSPSRVQTEGC*DIGDLG Trigger: CCCCAGATCCCCAATGTCCCAACAACCTTCAGTCTG...CACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATGGGCTGCTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCCCATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGGGCTAGGCTGTTATCTTCCTaGCAGGTGTTTGGCTCTATG | + |
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Preference number: 2 (lower is better) Translates to: AAHLQSRAPMFSVPHGWARLLSS*QVFGSM Trigger: CATAGAGCCAAACACCTGTCAGGAAGATAACAGCCT...AGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATGGGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CAA 90 bp | AGAGGCAGGTGGCCCAAGAGGCACAGACTGAAGGTTGTTGGGACATaGGGGATCTGGGGTTGTCAGTCTCTCATCCCGAGAGGCACTGAC | + |
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Preference number: 2 (lower is better) Translates to: RGRWPKRHRLKVVGT*GIWGCQSLIPRGTD Trigger: GTCAGTGCCTCTCGGGATGAGAGACTGACAACCCCAGATCCCCAATGTCCCAACAACCTTCAGTCTGTGCCTCTTGGGCCACCTGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CAA 90 bp | GACTCTCTGAAGAGGTTTGACCCACAGGTTGAGAACCTCCGGTGGTaGTGCGGCCTTCCTGGTAGTGCTTTCTTCCCAAGGAAAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: DSLKRFDPQVENLRW*CGLPGSAFFPRKGL Trigger: AAGCCCTTTCCTTGGGAAGAAAGCACTACCAGGAAGGCCGCACAACCACCGGAGGTTCTCAACCTGTGGGTCAAACCTCTTCAGAGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR TCA 90 bp | CACCTAAGGCCAGAAGAGGGAGAAAGAGCACAGTGTGAACATCATCTAACCGAACAAAGTGGCCGTCACTaGTCCTTGGGCCCAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: HLRPEEGERAQCEHHLTEQSGRH*SLGPEA Trigger: GGCCTCTGGGCCCAAGGATCAGTGACGGCCACTTTG...TTCGGTTAGATGATGTTCACACTGTGCTCTTTCTCCCTCTTCTGGCCTTAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCAACTCTCTCACTTGCTCTGTTTCTTGCAGGGAAGACCTCTCTGTGAACTGAACCTCCGGTGGTTGTaGGGCCTTCCTGGTAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: PQLSHLLCFLQGRPLCELNLRWL*GLPGSA Trigger: AGCACTACCAGGAAGGCCGCACAACCACCGGAGGTT...CAGTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGAGAGAGTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR CCA 90 bp | ATCAGCTGTGGTTGTAACGTCCCCTCCCTGGGATCCTTCAGCATCCCCATTTCCTGCAGCGTTGTCCTGTaGGTGTCCCATGTGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: ISCGCNVPSLGSFSIPISCSVVL*VSHVSF Trigger: AAAGGACACATGGGACACCCACAGGACAACGCTGCA...GGAAATGGGGATGCTGAAGGATCCCAGGGAGGGGACGTTACAACCACAGCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCCAGAAGAGGGAGAAAGAGCACAGTGTGAACATCATCTAACCGAACTTGAAGCCGCTGGCCTTGGGTaGGGCAGGAGCCTGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: RPEEGERAQCEHHLTELEAAGLG*GRSLLS Trigger: AGAAAGCAGGCTCCTGCCCCACCCAAGGCCAGCGGC...TTCAAGTTCGGTTAGATGATGTTCACACTGTGCTCTTTCTCCCTCTTCTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CAA 90 bp | CTCTACAGCTGTGCTGTACAGTCCCAGTCCTCTGTGTGGCTGATTTaGAAGCAGGTCAGGGGTCGGGCAGTTAATTTGCCCAAGGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: LYSCAVQSQSSVWLI*KQVRGRAVNLPKAV Trigger: AACAGCCTTGGGCAAATTAACTGCCCGACCCCTGACCTGCTTCAAAATCAGCCACACAGAGGACTGGGACTGTACAGCACAGCTGTAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAACTCTCTCACTTGCTCTGTTTCTTGCAGGGAAGACCTCTCTGTGAACTGTTACAATCAAACGCCGTaGGTCCAAAGTGGCCGTCAC | + |
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Preference number: 2 (lower is better) Translates to: PNSLTCSVSCREDLSVNCYNQTP*VQSGRH Trigger: GTGACGGCCACTTTGGACTCACGGCGTTTGATTGTA...ACAGTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGAGAGAGTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTATGAGATCAAAGCCTGGGGAAGTCCCTCCGAGGGGCTCATTTGCATATTGGTCATGCTGAGTCTATaGCAGAGCCCATCTTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LYEIKAWGSPSEGLICILVMLSL*QSPSCQ Trigger: CTGGCAAGATGGGCTCTGCCATAGACTCAGCATGAC...CAATATGCAAATGAGCCCCTCGGAGGGACTTCCCCAGGCTTTGATCTCATACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAACTCTCTCACTTGCTCTGTTTCTTGCAGGGAAGACCTCTCTGTGAACTGTAGAGGCAGAGGCAGGTaGATCTCTGTGAGTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PNSLTCSVSCREDLSVNCRGRGR*ISVSLR Trigger: CCTCAAACTCACAGAGATCCACCTGCCTCTGCCTCT...ACAGTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGAGAGAGTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CAA 90 bp | GGTTTATTCACTCCTTCTGTCTCCTCTGGCCCTCAGGTCACATGGTaGATCTGGATGGCCAGCTTAGTCATGCACTGGTTGTATGAGATC | + |
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Preference number: 2 (lower is better) Translates to: GLFTPSVSSGPQVTW*IWMASLVMHWLYEI Trigger: GATCTCATACAACCAGTGCATGACTAAGCTGGCCATCCAGATCAACCATGTGACCTGAGGGCCAGAGGAGACAGAAGGAGTGAATAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR TCA 90 bp | TTGTATGAGATCAAAGCCTGGGGAAGTCCCTCCGAGGGGCTCATTTGCATATTGAGGTGTTTGGCTCTATaGGCAGTGGCTCTCAACCTT | + |
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Preference number: 2 (lower is better) Translates to: LYEIKAWGSPSEGLICILRCLAL*AVALNL Trigger: AAGGTTGAGAGCCACTGCTCATAGAGCCAAACACCT...CAATATGCAAATGAGCCCCTCGGAGGGACTTCCCCAGGCTTTGATCTCATACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR CCA 90 bp | ACGTCTTCCCAGTGGCTGAGGACTAACTACTGTTTTGTCCCCCTGCGGTTGAGGCTGGTTAAAGCTGGATaGAATTTTATGGTGGAGTAC | + |
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Preference number: 2 (lower is better) Translates to: TSSQWLRTNYCFVPLRLRLVKAG*NFMVEY Trigger: GTACTCCACCATAAAATTCCATCCAGCTTTAACCAG...CCTCAACCGCAGGGGGACAAAACAGTAGTTAGTCCTCAGCCACTGGGAAGACGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR-3UTR CCA 90 bp | AACGTGTTTAGAAAGAGCCTGGAAAATTGTGACTCCCCAGAGAAGTCACTTAAGGTAACGTCCCCTCCCTaGGATCCTTCAGCATCCCCA | + |
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Preference number: 2 (lower is better) Translates to: NVFRKSLENCDSPEKSLKVTSPP*DPSASP Trigger: TGGGGATGCTGAAGGATCCCAGGGAGGGGACGTTAC...CTTAAGTGACTTCTCTGGGGAGTCACAATTTTCCAGGCTCTTTCTAAACACGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| 3UTR CAA 90 bp | ATGGTGAATCTGTCTACAGCATCCCCAGGACCCCAACTCTCTCACTaGCTCTGTTTCTTGCAGGGAAGACCTCTCTGTGAACTGTTTATA | + |
|
Preference number: 2 (lower is better) Translates to: MVNLSTASPGPQLSH*LCFLQGRPLCELFI Trigger: TATAAACAGTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGAGAGAGTTGGGGTCCTGGGGATGCTGTAGACAGATTCACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCAACTCTCTCACTTGCTCTGTTTCTTGCAGGGAAGACCTCTCTGTGAACTGTTCCCCATTTCCTGTTTaGTGGAACAACCTGCTATCA | + |
|
Preference number: 2 (lower is better) Translates to: PNSLTCSVSCREDLSVNCSPFPV*WNNLLS Trigger: TGATAGCAGGTTGTTCCAGCAAACAGGAAATGGGGA...ACAGTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGAGAGAGTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTATGACTAGTGCAGCATTCTCCAGACTGTCCTGTGAGAGTGGAGCAGTTAGAGTCTACAAAGCAAATTaGAGGACAGCCAGGGCTACA | + |
|
Preference number: 2 (lower is better) Translates to: TMTSAAFSRLSCESGAVRVYKAN*RTARAT Trigger: TGTAGCCCTGGCTGTCCTGCAATTTGCTTTGTAGAC...TCTAACTGCTCCACTCTCACAGGACAGTCTGGAGAATGCTGCACTAGTCATAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTATGACTAGTGCAGCATTCTCCAGACTGTCCTGTGAGAGTGGAGCAGTTAGAGTCACATGGTTGATCTaGATGGCCAGCTTAGTCATG | + |
|
Preference number: 2 (lower is better) Translates to: TMTSAAFSRLSCESGAVRVTWLI*MASLVM Trigger: CATGACTAAGCTGGCCATCCAGATCAACCATGTGAC...TCTAACTGCTCCACTCTCACAGGACAGTCTGGAGAATGCTGCACTAGTCATAGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CAA 90 bp | CTGACAGGTGTTTGGCTCTATGAGCAGTGGCTCTCAACCTTTGTATaGCTGAGACCCTTAATACAGTTCCTCAAGTTGTCACCACAACCT | + |
|
Preference number: 2 (lower is better) Translates to: LTGVWLYEQWLSTFV*LRPLIQFLKLSPQP Trigger: AGGTTGTGGTGACAACTTGAGGAACTGTATTAAGGGTCTCAGCAATACAAAGGTTGAGAGCCACTGCTCATAGAGCCAAACACCTGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGAACTTAACCACGAGGTGGCCAGATCTAGTTGCAAGGACTCCTGGGAAATGTGGGCTTCTGGGTAACTaGTTAAAGCTGGATGGAATT | + |
|
Preference number: 2 (lower is better) Translates to: LNLTTRWPDLVARTPGKCGLLGN*LKLDGI Trigger: AATTCCATCCAGCTTTAACCAGTTACCCAGAAGCCC...ACATTTCCCAGGAGTCCTTGCAACTAGATCTGGCCACCTCGTGGTTAAGTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR-3UTR TCA 90 bp | AACGTGTTTAGAAAGAGCCTGGAAAATTGTGACTCCCCAGAGAAGTCACTTAAGCATGCACTGGTTGTATaGGATCAAAGCCTGGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: NVFRKSLENCDSPEKSLKHALVV*DQSLGK Trigger: CTTCCCCAGGCTTTGATCTCATACAACCAGTGCATG...CTTAAGTGACTTCTCTGGGGAGTCACAATTTTCCAGGCTCTTTCTAAACACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR-3UTR CCA 90 bp | AACGTGTTTAGAAAGAGCCTGGAAAATTGTGACTCCCCAGAGAAGTCACTTAAGAGGTTGTTGGGACATTaGGGATCTGGGGTTGTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: NVFRKSLENCDSPEKSLKRLLGH*GSGVVS Trigger: ACTGACAACCCCAGATCCCCAATGTCCCAACAACCT...CTTAAGTGACTTCTCTGGGGAGTCACAATTTTCCAGGCTCTTTCTAAACACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTATGACTAGTGCAGCATTCTCCAGACTGTCCTGTGAGAGTGGAGCAGTTAGATGTTTAGAAAGAGCCTaGAAAATTGTGACTCCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: TMTSAAFSRLSCESGAVRCLERA*KIVTPQ Trigger: CTGGGGAGTCACAATTTTCCAGGCTCTTTCTAAACA...TCTAACTGCTCCACTCTCACAGGACAGTCTGGAGAATGCTGCACTAGTCATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR-3UTR CCA 90 bp | AACGTGTTTAGAAAGAGCCTGGAAAATTGTGACTCCCCAGAGAAGTCACTTAAGTGGCTCTATGAGCAGTaGCTCTCAACCTTTGTATTG | + |
|
Preference number: 2 (lower is better) Translates to: NVFRKSLENCDSPEKSLKWLYEQ*LSTFVL Trigger: CAATACAAAGGTTGAGAGCCACTGCTCATAGAGCCA...CTTAAGTGACTTCTCTGGGGAGTCACAATTTTCCAGGCTCTTTCTAAACACGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTCTTGCAGGGAAGACCTCTCTGTGAACTGTTTATACAACTTCCATTTTTGTCCCAGTCCTCTGTGTaGCTGATTTTGAAGCAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: CFLQGRPLCELFIQLPFLSQSSV*LILKQV Trigger: GACCTGCTTCAAAATCAGCCACACAGAGGACTGGGA...CAAAAATGGAAGTTGTATAAACAGTTCACAGAGAGGTCTTCCCTGCAAGAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CAA 90 bp | TTGCAGGGAAGACCTCTCTGTGAACTGTTTATACAACTTCCATTTTaGATTATATTGAACTTAACCACGAGGTGGCCAGATCTAGTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LQGRPLCELFIQLPF*IILNLTTRWPDLVA Trigger: TGCAACTAGATCTGGCCACCTCGTGGTTAAGTTCAATATAATCAAAAATGGAAGTTGTATAAACAGTTCACAGAGAGGTCTTCCCTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CAA 90 bp | CTCTCAACCTTTGTATTGCTGAGACCCTTAATACAGTTCCTCAAGTaGTCACCACAACCTCCGACCATAAAAATAATTTTGTTGCTACTT | + |
|
Preference number: 2 (lower is better) Translates to: LSTFVLLRPLIQFLK*SPQPPTIKIILLLL Trigger: AAGTAGCAACAAAATTATTTTTATGGTCGGAGGTTGTGGTGACAACTTGAGGAACTGTATTAAGGGTCTCAGCAATACAAAGGTTGAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CCA 72 bp | GGAGTACCAAGGCCTTCTTCCCATCACTCAAATACCTaGATGGGGCCGCTGGCCTTGGGTGGGGCAGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GVPRPSSHHSNT*MGPLALGGAGA Trigger: GGCTCCTGCCCCACCCAAGGCCAGCGGCCCCATCCAGGTATTTGAGTGATGGGAAGAAGGCCTTGGTACTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CCA 72 bp | CCCATCACTCAAATACCTGGATGGGGCCGCTGGCCTTaGGTGGGGCAGGAGCCTGCTTTCTTAGAGGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PITQIPGWGRWP*VGQEPAFLEAG Trigger: ACCTGCCTCTAAGAAAGCAGGCTCCTGCCCCACCCAAGGCCAGCGGCCCCATCCAGGTATTTGAGTGATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR TCA 72 bp | CCTTGGGCCCAGAGGCCACAGGGTGGGGCAGTTTCTTaGGCTTTCAAGCTTCCAGAGACTTCCTCCAGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: PWAQRPQGGAVS*AFKLPETSSRR Trigger: ACGCCTGGAGGAAGTCTCTGGAAGCTTGAAAGCTCAAGAAACTGCCCCACCCTGTGGCCTCTGGGCCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR GCA 72 bp | CTCACGGGTGGGCTCTGGGCAGGCGCTCTACAGCTGTaGTGTACAGTCCCAGTCCTCTGTGTGGCTGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: LTGGLWAGALQL*CTVPVLCVADF Trigger: AAAATCAGCCACACAGAGGACTGGGACTGTACAGCACAGCTGTAGAGCGCCTGCCCAGAGCCCACCCGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR TCA 72 bp | AGGGCTAGTCACTGTGACTGGAGTCTGGAGGGAAAGTaGTGGCGCACCTGGACTACTGGGCACTGCTTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RASHCDWSLEGK*WRTWTTGHCLH Trigger: GTGCAAGCAGTGCCCAGTAGTCCAGGTGCGCCATCACTTTCCCTCCAGACTCCAGTCACAGTGACTAGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CCA 72 bp | TTGGGTGGGGCAGGAGCCTGCTTTCTTAGAGGCAGGTaGCCCAAGAGGCACAGACTGAAGGTTGTTGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: LGGAGACFLRGR*PKRHRLKVVGT Trigger: TGTCCCAACAACCTTCAGTCTGTGCCTCTTGGGCCACCTGCCTCTAAGAAAGCAGGCTCCTGCCCCACCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR TCA 72 bp | GATCTGGGGTTGTCAGTCTCTCATCCCGAGAGGCACTaGCTCCATGTCATGCTGAGTCTATGGCAGAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: DLGLSVSHPERH*LHVMLSLWQSP Trigger: TGGGCTCTGCCATAGACTCAGCATGACATGGAGTCAGTGCCTCTCGGGATGAGAGACTGACAACCCCAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR TCA 72 bp | GCTTTCTTAGAGGCAGGTGGCCCAAGAGGCACAGACTaGAGGTTGTTGGGACATTGGGGATCTGGGGTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: AFLEAGGPRGTD*RLLGHWGSGVV Trigger: GACAACCCCAGATCCCCAATGTCCCAACAACCTTCAGTCTGTGCCTCTTGGGCCACCTGCCTCTAAGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR TCA 72 bp | GATCTGGATGGCCAGCTTAGTCATGCACTGGTTGTATaGGATCAAAGCCTGGGGAAGTCCCTCCGAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: DLDGQLSHALVV*DQSLGKSLRGA Trigger: AGCCCCTCGGAGGGACTTCCCCAGGCTTTGATCTCATACAACCAGTGCATGACTAAGCTGGCCATCCAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR GCA 72 bp | CTGAGTCTATGGCAGAGCCCATCTTGCCAGTTTCCCTaGAGCGTTGTCCTGTGGGTGTCCCATGTGTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSLWQSPSCQFP*SVVLWVSHVSF Trigger: AAAGGACACATGGGACACCCACAGGACAACGCTGCAGGGAAACTGGCAAGATGGGCTCTGCCATAGACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CCA 72 bp | CCTTTCTATAGGTGTGAAGCCCTGAGGGGTGGGGTCTaGAAGTTGAGATTCTGTCTTCTGTGCAGGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PFYRCEALRGGV*KLRFCLLCRLG Trigger: GCCCAGCCTGCACAGAAGACAGAATCTCAACTTCCAGACCCCACCCCTCAGGGCTTCACACCTATAGAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CCA 72 bp | AGGCACAGACTGAAGGTTGTTGGGACATTGGGGATCTaGGGTTGTCAGTCTCTCATCCCGAGAGGCACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: RHRLKVVGTLGI*GCQSLIPRGTD Trigger: GTCAGTGCCTCTCGGGATGAGAGACTGACAACCCCAGATCCCCAATGTCCCAACAACCTTCAGTCTGTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CCA 72 bp | AGGCAGGTGGCCCAAGAGGCACAGACTGAAGGTTGTTaGGACATTGGGGATCTGGGGTTGTCAGTCTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: RQVAQEAQTEGC*DIGDLGLSVSH Trigger: ATGAGAGACTGACAACCCCAGATCCCCAATGTCCCAACAACCTTCAGTCTGTGCCTCTTGGGCCACCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CCA 72 bp | CTCTACAGCTGTGCTGTACAGTCCCAGTCCTCTGTGTaGCTGATTTTGAAGCAGGTCAGGGGTCGGGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LYSCAVQSQSSV*LILKQVRGRAV Trigger: AACTGCCCGACCCCTGACCTGCTTCAAAATCAGCCACACAGAGGACTGGGACTGTACAGCACAGCTGTAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR TCA 72 bp | TCTCTCATCCCGAGAGGCACTGACTCCATGTCATGCTaGGTCTATGGCAGAGCCCATCTTGCCAGTTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SLIPRGTDSMSC*VYGRAHLASFP Trigger: AGGGAAACTGGCAAGATGGGCTCTGCCATAGACTCAGCATGACATGGAGTCAGTGCCTCTCGGGATGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR TCA 72 bp | GGAGAACTCAGCTTTAGGTGGGCTCATTCAGGAACCTaGCTGACAGGGCTAGTCACTGTGACTGGAGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GELSFRWAHSGT*LTGLVTVTGVW Trigger: CCAGACTCCAGTCACAGTGACTAGCCCTGTCAGTCAGGTTCCTGAATGAGCCCACCTAAAGCTGAGTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR TCA 72 bp | GTTGAGAAGGCTGGGTCTCCTCACCTGTGGTCAGATTaGGCTGGGCTACGGTGCAGTAATAAGAAGCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VEKAGSPHLWSD*AGLRCSNKKPH Trigger: ATGGGGCTTCTTATTACTGCACCGTAGCCCAGCTCAATCTGACCACAGGTGAGGAGACCCAGCCTTCTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR GCA 72 bp | AGGTTTGACCCACAGGTTGAGAACCTCCGGTGGTTGTaGGGCCTTCCTGGTAGTGCTTTCTTCCCAAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RFDPQVENLRWL*GLPGSAFFPRK Trigger: TTTCCTTGGGAAGAAAGCACTACCAGGAAGGCCGCACAACCACCGGAGGTTCTCAACCTGTGGGTCAAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR GCA 72 bp | ATCAAAGCCTGGGGAAGTCCCTCCGAGGGGCTCATTTaGATATTGCCAATCAGCTGTGGTTGTAACGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: IKAWGSPSEGLI*ILPISCGCNVP Trigger: GGGGACGTTACAACCACAGCTGATTGGCAATATGCAAATGAGCCCCTCGGAGGGACTTCCCCAGGCTTTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CCA 72 bp | TTCACTCCTTCTGTCTCCTCTGGCCCTCAGGTCACATaGTTGATCTGGATGGCCAGCTTAGTCATGCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: FTPSVSSGPQVT*LIWMASLVMHW Trigger: CCAGTGCATGACTAAGCTGGCCATCCAGATCAACCATGTGACCTGAGGGCCAGAGGAGACAGAAGGAGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR GCA 72 bp | TGTCTACAGCATCCCCAGGACCCCAACTCTCTCACTTaGTCTGTTTCTTGCAGGGAAGACCTCTCTGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: CLQHPQDPNSLT*SVSCREDLSVN Trigger: GTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGAGAGAGTTGGGGTCCTGGGGATGCTGTAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CCA 72 bp | TATTGCCAATCAGCTGTGGTTGTAACGTCCCCTCCCTaGGATCCTTCAGCATCCCCATTTCCTGTTTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: YCQSAVVVTSPP*DPSASPFPVCW Trigger: CCAGCAAACAGGAAATGGGGATGCTGAAGGATCCCAGGGAGGGGACGTTACAACCACAGCTGATTGGCAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCTGCAGCGTTGTCCTGTGGGTGTCCCATGTGTCCTTTCTATAGGTGTGAAGGTGGGGTCTGGAAGTaGAGATTCTGTCTTCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: FPAALSCGCPMCPFYRCEGGVWK*RFCLLC Trigger: GCACAGAAGACAGAATCTCAACTTCCAGACCCCACC...TTCACACCTATAGAAAGGACACATGGGACACCCACAGGACAACGCTGCAGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAACTCTCTCACTTGCTCTGTTTCTTGCAGGGAAGACCTCTCTGTGAACTGTCTCCGAGGGGCTCATTaGCATATTGCCAATCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PNSLTCSVSCREDLSVNCLRGAH*HIANQL Trigger: CAGCTGATTGGCAATATGCAAATGAGCCCCTCGGAG...ACAGTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGAGAGAGTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR TCA 72 bp | GTCGGGCAGTTAATTTGCCCAAGGCTGTTATCTTCCTaGCAGGTGTTTGGCTCTATGAGCAGTGGCTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: VGQLICPRLLSS*QVFGSMSSGSQ Trigger: TTGAGAGCCACTGCTCATAGAGCCAAACACCTGTCAGGAAGATAACAGCCTTGGGCAAATTAACTGCCCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR TCA 72 bp | CACTCCTGTGATACTTCGGTCTCAGGTAGACAGCTATaGAAAGGGTCAGGAGAACTCAGCTTTAGGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: HSCDTSVSGRQL*KGSGELSFRWA Trigger: AGCCCACCTAAAGCTGAGTTCTCCTGACCCTTTTCATAGCTGTCTACCTGAGACCGAAGTATCACAGGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR GCA 72 bp | CCCCAGGACCCCAACTCTCTCACTTGCTCTGTTTCTTaGAGGGAAGACCTCTCTGTGAACTGTTTATACAAC | + |
|
Preference number: 3 (lower is better) Translates to: PQDPNSLTCSVS*REDLSVNCLYN Trigger: GTTGTATAAACAGTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGAGAGAGTTGGGGTCCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CCA 72 bp | AGCTTAGTCATGCACTGGTTGTATGAGATCAAAGCCTaGGGAAGTCCCTCCGAGGGGCTCATTTGCATATTG | + |
|
Preference number: 3 (lower is better) Translates to: SLVMHWLYEIKA*GSPSEGLICIL Trigger: CAATATGCAAATGAGCCCCTCGGAGGGACTTCCCCAGGCTTTGATCTCATACAACCAGTGCATGACTAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGACCCCAACTCTCTCACTTGCTCTGTTTCTTGCAGGGAAGACCTCTCTGTCTCTCAACCTTTGTATaGCTGAGACCCTTAATACAG | + |
|
Preference number: 3 (lower is better) Translates to: PGPQLSHLLCFLQGRPLCLSTFV*LRPLIQ Trigger: CTGTATTAAGGGTCTCAGCAATACAAAGGTTGAGAG...ACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGAGAGAGTTGGGGTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR TCA 72 bp | CAAGGCTGTTATCTTCCTGACAGGTGTTTGGCTCTATaGGCAGTGGCTCTCAACCTTTGTATTGCTGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: QGCYLPDRCLAL*AVALNLCIAET Trigger: GGTCTCAGCAATACAAAGGTTGAGAGCCACTGCTCATAGAGCCAAACACCTGTCAGGAAGATAACAGCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR GCA 72 bp | CCTCCCTGGGATCCTTCAGCATCCCCATTTCCTGTTTaGTGGAACAACCTGCTATCAAAGAGTGGCTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PPWDPSASPFPV*WNNLLSKSGLK Trigger: TTTTAAGCCACTCTTTGATAGCAGGTTGTTCCAGCAAACAGGAAATGGGGATGCTGAAGGATCCCAGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CCA 72 bp | CCCTGGGATCCTTCAGCATCCCCATTTCCTGTTTGCTaGAACAACCTGCTATCAAAGAGTGGCTTAAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: PWDPSASPFPVC*NNLLSKSGLKQ Trigger: TTGTTTTAAGCCACTCTTTGATAGCAGGTTGTTCCAGCAAACAGGAAATGGGGATGCTGAAGGATCCCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CCA 72 bp | AATTTGCCCAAGGCTGTTATCTTCCTGACAGGTGTTTaGCTCTATGAGCAGTGGCTCTCAACCTTTGTATTG | + |
|
Preference number: 3 (lower is better) Translates to: NLPKAVIFLTGV*LYEQWLSTFVL Trigger: CAATACAAAGGTTGAGAGCCACTGCTCATAGAGCCAAACACCTGTCAGGAAGATAACAGCCTTGGGCAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CCA 72 bp | CTTCTGGGTAACTGGTTAAAGCTGGATGGAATTTTATaGTGGAGTACCAAGGCCTTCTTCCCATCACTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LLGNWLKLDGIL*WSTKAFFPSLK Trigger: TTTGAGTGATGGGAAGAAGGCCTTGGTACTCCACCATAAAATTCCATCCAGCTTTAACCAGTTACCCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR GCA 72 bp | GACTCCCCAGAGAAGTCACTTAAGTTAGGGAGTTTTTaGTCAGATCTCTCTCTAATTAGCATGGTGAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: DSPEKSLKLGSF*SDLSLISMVNL Trigger: CAGATTCACCATGCTAATTAGAGAGAGATCTGAGCAAAAACTCCCTAACTTAAGTGACTTCTCTGGGGAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR GCA 72 bp | ACTGCTTGCACCCACATTTCATTAATCAGAGCTTTTTaGATTCTAATTAGGGGCTGTGGAAATGCAATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TACTHISLIRAF*ILIRGCGNAIP Trigger: TGGAATTGCATTTCCACAGCCCCTAATTAGAATGCAAAAAGCTCTGATTAATGAAATGTGGGTGCAAGCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR TCA 72 bp | TGTTGCTACTTCACAACTGTAATTTTGCTACTGTTATaGGCCATAATCTACATATCTGGCATTTCTGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: CCYFTTVILLLL*AIIYISGISDG Trigger: ACCATCAGAAATGCCAGATATGTAGATTATGGCTCATAACAGTAGCAAAATTACAGTTGTGAAGTAGCAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR TCA 72 bp | TCACTTGCTCTGTTTCTTGCAGGGAAGACCTCTCTGTaGACTGTTTATACAACTTCCATTTTTGATTATATT | + |
|
Preference number: 3 (lower is better) Translates to: SLALFLAGKTSL*TVYTTSIFDYI Trigger: AATATAATCAAAAATGGAAGTTGTATAAACAGTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CCA 72 bp | ATTTCCTGTTTGCTGGAACAACCTGCTATCAAAGAGTaGCTTAAAACAACTACAGTTTATCATCTTACAATC | + |
|
Preference number: 3 (lower is better) Translates to: ISCLLEQPAIKE*LKTTTVYHLTI Trigger: GATTGTAAGATGATAAACTGTAGTTGTTTTAAGCCACTCTTTGATAGCAGGTTGTTCCAGCAAACAGGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCCCATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGGGCTGCTGTCCCATGGCACTaGCATCCCTCTGGGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AAHLQSRAPMFSVPHGWAAVPWH*HPSGAV Trigger: CACGGCCCCAGAGGGATGGCAGTGCCATGGGACAGC...AGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATGGGCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGCAGCCCATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGCTGTGGCTGGATTCCTaGGGCTCCGGCCCTTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSPSAEPRPHVLSPSRVLWLDS*GSGPSG Trigger: GCCGGAAGGGCCGGAGCCCCAGGAATCCAGCCACAG...CACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATGGGCTGCTTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCCCATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGGGCTGTGCTGGGAACACCGTaGAGGGACAGAAGAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAHLQSRAPMFSVPHGWAVLGTP*RDRRRS Trigger: GGACCTTCTTCTGTCCCTTCACGGTGTTCCCAGCAC...AGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATGGGCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGGGCTCTGGGCAGGCGCCTTGCTCCATGTCACTaGTGGGAGACACCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSRAPMFSVPHGWALGRRLAPCH*WETPGR Trigger: TCTTCCTGGTGTCTCCCATCAGTGACATGGAGCAAG...GCGCCTGCCCAGAGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | CATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGGGCTCTGGGCGGGATCATCTCGATGTaGAGGGCTGCCTGTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HLQSRAPMFSVPHGWALGGIISM*RAACEP Trigger: AGGCTCACAGGCAGCCCTCCACATCGAGATGATCCC...GCCCAGAGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | CATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGGGCTCTGGGCGTGGAGGCTGACTCATaGGTGGGCTTCCTTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLQSRAPMFSVPHGWALGVEADS*VGFLAP Trigger: TGGAGCAAGGAAGCCCACCCATGAGTCAGCCTCCAC...GCCCAGAGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR GCA 90 bp | CATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGGGCTCTGGGCCGGCCACCTGATAGGTaGCACTATCTGAAGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLQSRAPMFSVPHGWALGRPPDR*HYLKVG Trigger: CCCAACCTTCAGATAGTGGCACCTATCAGGTGGCCG...GCCCAGAGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCAGTTCCGCAAGCAGCCCATCTGCAGAGCCGCGCCCCCATGTTCTCAGTTCTGGCTCTGGCTCCTaGGATGCTGGTGGAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSSASSPSAEPRPHVLSSGSGS*DAGGGG Trigger: ACCACCTCCACCAGCATCTCAGGAGCCAGAGCCAGA...ACTGAGAACATGGGGGCGCGGCTCTGCAGATGGGCTGCTTGCGGAACTGGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGCAGCCCATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGATAGTGCTGGTGCTCTaGCTCTGGCTCCTGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSPSAEPRPHVLSPSRVIVLVL*LWLLRC Trigger: GCATCTCAGGAGCCAGAGCCAGAGCACCAGCACTAT...CACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATGGGCTGCTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGCAGCCCATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGATGGGTGGGCTTCCTTaGTCCATGTCACTGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASSPSAEPRPHVLSPSRVMGGLP*SMSLMG Trigger: TCCCATCAGTGACATGGAGCAAGGAAGCCCACCCAT...CACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATGGGCTGCTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCCCATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGGGCTCTTTTGAGGCTGCTCTaGGATCATCTCGATGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AAHLQSRAPMFSVPHGWALLRLL*DHLDVE Trigger: CTCCACATCGAGATGATCCCAGAGCAGCCTCAAAAG...AGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATGGGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGGGCTCTGGGCAGGCGCAGACACCAGGAAGACTaGAGATGGCATCACTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: QSRAPMFSVPHGWALGRRRHQED*RWHHFI Trigger: TATGAAGTGATGCCATCTCCAGTCTTCCTGGTGTCT...GCGCCTGCCCAGAGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR GCA 90 bp | CATCTGCAGAGCCGCGCCCCCATGTTCTCAGTCCCTCACGGGTGGGCTCTGGGCCCAGGACATAGGCAATaGCACATACAAGTAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: HLQSRAPMFSVPHGWALGPGHRQ*HIQVVT Trigger: GGTCACTACTTGTATGTGGCATTGCCTATGTCCTGG...GCCCAGAGCCCACCCGTGAGGGACTGAGAACATGGGGGCGCGGCTCTGCAGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGCTGTGGTTGTAACGTCCCCTCCCTGGGATCCTTCAGCATCCCCATTTCCGCTGCCTGTGAGCCTTaGGGCAGCTCAAGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISCGCNVPSLGSFSIPISAACEP*GSSRAR Trigger: CCTGGCCCTTGAGCTGCCCCAAGGCTCACAGGCAGC...GGAAATGGGGATGCTGAAGGATCCCAGGGAGGGGACGTTACAACCACAGCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGACCCCAACTCTCTCACTTGCTCTGTTTCTTGCAGGGAAGACCTCTCTGTGTGGAGGGCTGCCTGTaGGCCTTGGGGCAGCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGPQLSHLLCFLQGRPLCVEGCL*ALGQLK Trigger: CTTGAGCTGCCCCAAGGCTCACAGGCAGCCCTCCAC...ACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGAGAGAGTTGGGGTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCTCAGTCCCTCACGGGTGGGCTCTGGGCAGGCGCTCTACAGCTGTGCTGTTACCAGATGAAATCCTaGGCAGTGCTGGGAACACCG | + |
|
Preference number: 4 (lower is better) Translates to: CSQSLTGGLWAGALQLCCYQMKS*AVLGTP Trigger: CGGTGTTCCCAGCACTGCTCAGGATTTCATCTGGTA...ACAGCACAGCTGTAGAGCGCCTGCCCAGAGCCCACCCGTGAGGGACTGAGAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR TCA 90 bp | ACGTCTTCCCAGTGGCTGAGGACTAACTACTGTTTTGTCCCCCTGCGGTTGAGGATGGACAGGGAGGAGTaGGGAGACCTCGCGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TSSQWLRTNYCFVPLRLRMDREE*GDLACT Trigger: GGTGCACGCGAGGTCTCCTCACTCCTCCCTGTCCAT...CCTCAACCGCAGGGGGACAAAACAGTAGTTAGTCCTCAGCCACTGGGAAGACGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGCGTGTCACGTGTCACGTCTTCCCAGTGGCTGAGGACTAACTACTGTTTTGAACAGGAGGCCCTTTaGGAAGCAGCCCGGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGVSRVTSSQWLRTNYCFEQEAL*EAARWG Trigger: ACCCCACCGGGCTGCTTCTCAAAGGGCCTCCTGTTC...AAAACAGTAGTTAGTCCTCAGCCACTGGGAAGACGTGACACGTGACACGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | TTGTATGAGATCAAAGCCTGGGGAAGTCCCTCCGAGGGGCTCATTTGCATATTGGCACTGCCATCCCTCTaGGGCCGTGGTAGTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYEIKAWGSPSEGLICILALPSL*GRGSPG Trigger: CCCCGGACTACCACGGCCCCAGAGGGATGGCAGTGC...CAATATGCAAATGAGCCCCTCGGAGGGACTTCCCCAGGCTTTGATCTCATACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCGTGTCACGTGTCACGTCTTCCCAGTGGCTGAGGACTAACTACTGTTTTTGGCTTCTCTGTGGCTaGATTCCTGGGGCTCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGVSRVTSSQWLRTNYCFWLLCG*IPGAPA Trigger: GGCCGGAGCCCCAGGAATCCAGCCACAGAGAAGCCA...AAAACAGTAGTTAGTCCTCAGCCACTGGGAAGACGTGACACGTGACACGCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTGTACAGTCCCAGTCCTCTGTGTGGCTGATTTTGAAGCAGGTCAGGGGCTGGTGCTCTGGCTCTaGCTCCTGAGATGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCCTVPVLCVADFEAGQGLVLWL*LLRCWW Trigger: CCACCAGCATCTCAGGAGCCAGAGCCAGAGCACCAG...CCCCTGACCTGCTTCAAAATCAGCCACACAGAGGACTGGGACTGTACAGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CAA 72 bp | TATAGGTGTGAAGCCCTGAGGGGTGGGGTCTGGAAGTaGAGATTCTGTCTTCTGTGCAGGCTGGGCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YRCEALRGGVWK*RFCLLCRLGRG Trigger: CCCTCGGCCCAGCCTGCACAGAAGACAGAATCTCAACTTCCAGACCCCACCCCTCAGGGCTTCACACCTATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCGTGTCACGTGTCACGTCTTCCCAGTGGCTGAGGACTAACTACTGTTTTTGCTGGTGGAGGTGGTaGAGGCTGACTCATGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGVSRVTSSQWLRTNYCFCWWRW*RLTHGW Trigger: CCACCCATGAGTCAGCCTCCACCACCTCCACCAGCA...AAAACAGTAGTTAGTCCTCAGCCACTGGGAAGACGTGACACGTGACACGCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCTGCAGCGTTGTCCTGTGGGTGTCCCATGTGTCCTTTCTATAGGTGTGAACTCTGGCTCCTGAGATaGTGGTGGAGGTGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPAALSCGCPMCPFYRCELWLLR*WWRWWR Trigger: CCTCCACCACCTCCACCAGCATCTCAGGAGCCAGAG...TTCACACCTATAGAAAGGACACATGGGACACCCACAGGACAACGCTGCAGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CAA 72 bp | TGGCCCAAGAGGCACAGACTGAAGGTTGTTGGGACATaGGGGATCTGGGGTTGTCAGTCTCTCATCCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WPKRHRLKVVGT*GIWGCQSLIPR Trigger: TCTCGGGATGAGAGACTGACAACCCCAGATCCCCAATGTCCCAACAACCTTCAGTCTGTGCCTCTTGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CAA 72 bp | TATGGCAGAGCCCATCTTGCCAGTTTCCCTGCAGCGTaGTCCTGTGGGTGTCCCATGTGTCCTTTCTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: YGRAHLASFPAA*SCGCPMCPFYR Trigger: CCTATAGAAAGGACACATGGGACACCCACAGGACAACGCTGCAGGGAAACTGGCAAGATGGGCTCTGCCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CAA 72 bp | TGTGCTGTACAGTCCCAGTCCTCTGTGTGGCTGATTTaGAAGCAGGTCAGGGGTCGGGCAGTTAATTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CAVQSQSSVWLI*KQVRGRAVNLP Trigger: GGGCAAATTAACTGCCCGACCCCTGACCTGCTTCAAAATCAGCCACACAGAGGACTGGGACTGTACAGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CAA 72 bp | ACTCCTTCTGTCTCCTCTGGCCCTCAGGTCACATGGTaGATCTGGATGGCCAGCTTAGTCATGCACTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPSVSSGPQVTW*IWMASLVMHWL Trigger: CAACCAGTGCATGACTAAGCTGGCCATCCAGATCAACCATGTGACCTGAGGGCCAGAGGAGACAGAAGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAACTCTCTCACTTGCTCTGTTTCTTGCAGGGAAGACCTCTCTGTGAACTGAGGCTGACTCATGGGTaGGCTTCCTTGCTCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PQLSHLLCFLQGRPLCELRLTHG*ASLLHV Trigger: GACATGGAGCAAGGAAGCCCACCCATGAGTCAGCCT...CAGTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGAGAGAGTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | CACCTAAGGCCAGAAGAGGGAGAAAGAGCACAGTGTGAACATCATCTAACCGAATGGCTCCTGAGATGCTaGTGGAGGTGGTGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLRPEEGERAQCEHHLTEWLLRC*WRWWRL Trigger: CAGCCTCCACCACCTCCACCAGCATCTCAGGAGCCA...TTCGGTTAGATGATGTTCACACTGTGCTCTTTCTCCCTCTTCTGGCCTTAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | CCCAACTCTCTCACTTGCTCTGTTTCTTGCAGGGAAGACCTCTCTGTGAACTGTGAAGTTGGCACCAGCTaGCAGTATGGGGCTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PNSLTCSVSCREDLSVNCEVGTS*QYGAGS Trigger: TGACCCAGCCCCATACTGCCAGCTGGTGCCAACTTC...ACAGTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGAGAGAGTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTGTACAGTCCCAGTCCTCTGTGTGGCTGATTTTGAAGCAGGTCAGGGGCAGCATGGAACCATTTaGGAAGCCAACAATGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LCCTVPVLCVADFEAGQGQHGTI*EANNVS Trigger: CGAGACATTGTTGGCTTCCCAAATGGTTCCATGCTG...CCCCTGACCTGCTTCAAAATCAGCCACACAGAGGACTGGGACTGTACAGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | CACCTAAGGCCAGAAGAGGGAGAAAGAGCACAGTGTGAACATCATCTAACCGAACTCCTGAGATGCTGGTaGAGGTGGTGGAGGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: HLRPEEGERAQCEHHLTELLRCW*RWWRLT Trigger: AGTCAGCCTCCACCACCTCCACCAGCATCTCAGGAG...TTCGGTTAGATGATGTTCACACTGTGCTCTTTCTCCCTCTTCTGGCCTTAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGCGTGTCACGTGTCACGTCTTCCCAGTGGCTGAGGACTAACTACTGTTTTATAGGTGCCACTATCTaGAGGTTGGGCATTTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGVSRVTSSQWLRTNYCFIGATI*RLGISK Trigger: CTTCGAAATGCCCAACCTTCAGATAGTGGCACCTAT...AAAACAGTAGTTAGTCCTCAGCCACTGGGAAGACGTGACACGTGACACGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTCTGTTTCTTGCAGGGAAGACCTCTCTGTGAACTGTTTATACAACTTCCAACCGTGATCCCGGCATaGACAGGGAGGAGTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLCFLQGRPLCELFIQLPTVIPA*TGRSEE Trigger: CTCCTCACTCCTCCCTGTCCATGCCGGGATCACGGT...TGGAAGTTGTATAAACAGTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CAA 72 bp | CCCTCCCTGGGATCCTTCAGCATCCCCATTTCCTGTTaGCTGGAACAACCTGCTATCAAAGAGTGGCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSLGSFSIPISC*LEQPAIKEWLK Trigger: TTTAAGCCACTCTTTGATAGCAGGTTGTTCCAGCAAACAGGAAATGGGGATGCTGAAGGATCCCAGGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CAA 72 bp | TCCCCAGGACCCCAACTCTCTCACTTGCTCTGTTTCTaGCAGGGAAGACCTCTCTGTGAACTGTTTATACAA | + |
|
Preference number: 4 (lower is better) Translates to: SPGPQLSHLLCF*QGRPLCELFIQ Trigger: TTGTATAAACAGTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAAGTGAGAGAGTTGGGGTCCTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR GCA 90 bp | AACGTGTTTAGAAAGAGCCTGGAAAATTGTGACTCCCCAGAGAAGTCACTTAAGAAGAGAACAGCCTTGTaGCTCCAGAAGCCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NVFRKSLENCDSPEKSLKKRTAL*LQKPPP Trigger: GGGAGGAGGCTTCTGGAGGCACAAGGCTGTTCTCTT...CTTAAGTGACTTCTCTGGGGAGTCACAATTTTCCAGGCTCTTTCTAAACACGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTCTGTTTCTTGCAGGGAAGACCTCTCTGTGAACTGTTTATACAACTTCCAAGGTCCTGGTTCTTTTaGGGCTGCTCTGGGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLCFLQGRPLCELFIQLPRSWFF*GCSGII Trigger: GATGATCCCAGAGCAGCCTCAAAAGAACCAGGACCT...TGGAAGTTGTATAAACAGTTCACAGAGAGGTCTTCCCTGCAAGAAACAGAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CAA 72 bp | GTTTGGCTCTATGAGCAGTGGCTCTCAACCTTTGTATaGCTGAGACCCTTAATACAGTTCCTCAAGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VWLYEQWLSTFV*LRPLIQFLKLS Trigger: TGACAACTTGAGGAACTGTATTAAGGGTCTCAGCAATACAAAGGTTGAGAGCCACTGCTCATAGAGCCAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS-3UTR CCA 90 bp | AACGTGTTTAGAAAGAGCCTGGAAAATTGTGACTCCCCAGAGAAGTCACTTAAGCAGGAAGACTGGAGATaGCATCACTTCATAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: NVFRKSLENCDSPEKSLKQEDWR*HHFIDV Trigger: AACATCTATGAAGTGATGCCATCTCCAGTCTTCCTG...CTTAAGTGACTTCTCTGGGGAGTCACAATTTTCCAGGCTCTTTCTAAACACGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CAA 72 bp | TTTGTATTGCTGAGACCCTTAATACAGTTCCTCAAGTaGTCACCACAACCTCCGACCATAAAAATAATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FVLLRPLIQFLK*SPQPPTIKIIL Trigger: CAAAATTATTTTTATGGTCGGAGGTTGTGGTGACAACTTGAGGAACTGTATTAAGGGTCTCAGCAATACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| 3UTR CAA 72 bp | AAGTTGTCACCACAACCTCCGACCATAAAAATAATTTaGTTGCTACTTCACAACTGTAATTTTGCTACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLSPQPPTIKII*LLLHNCNFATV Trigger: AACAGTAGCAAAATTACAGTTGTGAAGTAGCAACAAAATTATTTTTATGGTCGGAGGTTGTGGTGACAACTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS TCA 90 bp | CCAGGCAGGGTTCATGGTGGCGGCCACCTGATAGGTGCCACTATCTaGAGGTTGGGCATTTCGAAGCAGCATGGAACCATTTGGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGRVHGGGHLIGATI*RLGISKQHGTIWEA Trigger: GGCTTCCCAAATGGTTCCATGCTGCTTCGAAATGCCCAACCTTCAGATAGTGGCACCTATCAGGTGGCCGCCACCATGAACCCTGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
||
| CDS CCA 90 bp | GCATGGACAGGGAGGAGTGAGGAGACCTCGCGTGCACCAGCTACATaGACGTTAATCTTGGCCTTCATTGTCCAGGCAGGGTTCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AWTGRSEETSRAPAT*TLILAFIVQAGFMV Trigger: CACCATGAACCCTGCCTGGACAATGAAGGCCAAGATTAACGTCCATGTAGCTGGTGCACGCGAGGTCTCCTCACTCCTCCCTGTCCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS GCA 90 bp | TGGAACCATTTGGGAAGCCAACAATGTCTCGCTGTCCCATGGCACTaGCATCCCTCTGGGGCCGTGGTAGTCCGGGGATATAAGAGAACA | + |
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Preference number: 5 (lower is better) Translates to: WNHLGSQQCLAVPWH*HPSGAVVVRGYKRT Trigger: TGTTCTCTTATATCCCCGGACTACCACGGCCCCAGAGGGATGGCAGTGCCATGGGACAGCGAGACATTGTTGGCTTCCCAAATGGTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS CCA 90 bp | TTCATAGATGTTGCTGTCACCAGATTCAGGACTCAGGTTCACTTCTaGCTTCTCTGTGGCTGGATTCCTGGGGCTCCGGCCCTTCCGGCT | + |
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Preference number: 5 (lower is better) Translates to: FIDVAVTRFRTQVHF*LLCGWIPGAPALPA Trigger: AGCCGGAAGGGCCGGAGCCCCAGGAATCCAGCCACAGAGAAGCCAGAAGTGAACCTGAGTCCTGAATCTGGTGACAGCAACATCTATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS GCA 90 bp | CCTTCATTGTCCAGGCAGGGTTCATGGTGGCGGCCACCTGATAGGTaGCACTATCTGAAGGTTGGGCATTTCGAAGCAGCATGGAACCAT | + |
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Preference number: 5 (lower is better) Translates to: PSLSRQGSWWRPPDR*HYLKVGHFEAAWNH Trigger: ATGGTTCCATGCTGCTTCGAAATGCCCAACCTTCAGATAGTGGCACCTATCAGGTGGCCGCCACCATGAACCCTGCCTGGACAATGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS CCA 90 bp | CCTGATAGGTGCCACTATCTGAAGGTTGGGCATTTCGAAGCAGCATaGAACCATTTGGGAAGCCAACAATGTCTCGCTGTCCCATGGCAC | + |
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Preference number: 5 (lower is better) Translates to: PDRCHYLKVGHFEAA*NHLGSQQCLAVPWH Trigger: GTGCCATGGGACAGCGAGACATTGTTGGCTTCCCAAATGGTTCCATGCTGCTTCGAAATGCCCAACCTTCAGATAGTGGCACCTATCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS CCA 90 bp | TGGGCTTCCTTGCTCCATGTCACTGATGGGAGACACCAGGAAGACTaGAGATGGCATCACTTCATAGATGTTGCTGTCACCAGATTCAGG | + |
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Preference number: 5 (lower is better) Translates to: WASLLHVTDGRHQED*RWHHFIDVAVTRFR Trigger: CCTGAATCTGGTGACAGCAACATCTATGAAGTGATGCCATCTCCAGTCTTCCTGGTGTCTCCCATCAGTGACATGGAGCAAGGAAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS GCA 90 bp | TGGGAGACACCAGGAAGACTGGAGATGGCATCACTTCATAGATGTTaGTGTCACCAGATTCAGGACTCAGGTTCACTTCTGGCTTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: WETPGRLEMASLHRC*CHQIQDSGSLLASL Trigger: CAGAGAAGCCAGAAGTGAACCTGAGTCCTGAATCTGGTGACAGCAACATCTATGAAGTGATGCCATCTCCAGTCTTCCTGGTGTCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS CCA 90 bp | TCCTTGCTCCATGTCACTGATGGGAGACACCAGGAAGACTGGAGATaGCATCACTTCATAGATGTTGCTGTCACCAGATTCAGGACTCAG | + |
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Preference number: 5 (lower is better) Translates to: SLLHVTDGRHQEDWR*HHFIDVAVTRFRTQ Trigger: CTGAGTCCTGAATCTGGTGACAGCAACATCTATGAAGTGATGCCATCTCCAGTCTTCCTGGTGTCTCCCATCAGTGACATGGAGCAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS-3UTR CAA 90 bp | AACGTGTTTAGAAAGAGCCTGGAAAATTGTGACTCCCCAGAGAAGTCACTTAAGCATGGGTGGGCTTCCTaGCTCCATGTCACTGATGGG | + |
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Preference number: 5 (lower is better) Translates to: NVFRKSLENCDSPEKSLKHGWAS*LHVTDG Trigger: CCCATCAGTGACATGGAGCAAGGAAGCCCACCCATG...CTTAAGTGACTTCTCTGGGGAGTCACAATTTTCCAGGCTCTTTCTAAACACGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS-3UTR CAA 90 bp | AGGCCAGAAGAGGGAGAAAGAGCACAGTGTGAACATCATCTAACCGAACTTGAAGCAGCATGGAACCATTaGGGAAGCCAACAATGTCTC | + |
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Preference number: 5 (lower is better) Translates to: RPEEGERAQCEHHLTELEAAWNH*GSQQCL Trigger: GAGACATTGTTGGCTTCCCAAATGGTTCCATGCTGC...TTCAAGTTCGGTTAGATGATGTTCACACTGTGCTCTTTCTCCCTCTTCTGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS-3UTR CAA 90 bp | AAGAGTGGCTTAAAACAACTACAGTTTATCATCTTACAATCAAACGCCGTGAGTAAGGTCCTGGTTCTTTaGAGGCTGCTCTGGGATCAT | + |
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Preference number: 5 (lower is better) Translates to: KSGLKQLQFIILQSNAVSKVLVL*RLLWDH Trigger: ATGATCCCAGAGCAGCCTCAAAAGAACCAGGACCTT...ACTCACGGCGTTTGATTGTAAGATGATAAACTGTAGTTGTTTTAAGCCACTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS TCA 72 bp | CTGCTCTGGGATCATCTCGATGTGGAGGGCTGCCTGTaGGCCTTGGGGCAGCTCAAGGGCCAGGAACAAGGC | + |
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Preference number: 6 (lower is better) Translates to: LLWDHLDVEGCL*ALGQLKGQEQG Trigger: GCCTTGTTCCTGGCCCTTGAGCTGCCCCAAGGCTCACAGGCAGCCCTCCACATCGAGATGATCCCAGAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS CCA 72 bp | GTGCTCTGGCTCTGGCTCCTGAGATGCTGGTGGAGGTaGTGGAGGCTGACTCATGGGTGGGCTTCCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VLWLWLLRCWWR*WRLTHGWASLL Trigger: GAGCAAGGAAGCCCACCCATGAGTCAGCCTCCACCACCTCCACCAGCATCTCAGGAGCCAGAGCCAGAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS TCA 72 bp | GATGGCTACCGTGATCCCGGCATGGACAGGGAGGAGTaGGGAGACCTCGCGTGCACCAGCTACATGGACGTT | + |
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Preference number: 6 (lower is better) Translates to: DGYRDPGMDREE*GDLACTSYMDV Trigger: AACGTCCATGTAGCTGGTGCACGCGAGGTCTCCTCACTCCTCCCTGTCCATGCCGGGATCACGGTAGCCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS CCA 72 bp | ATAGTGCTGGTGCTCTGGCTCTGGCTCCTGAGATGCTaGTGGAGGTGGTGGAGGCTGACTCATGGGTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: IVLVLWLWLLRC*WRWWRLTHGWA Trigger: AGCCCACCCATGAGTCAGCCTCCACCACCTCCACCAGCATCTCAGGAGCCAGAGCCAGAGCACCAGCACTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS GCA 72 bp | TTGGGAAGCCAACAATGTCTCGCTGTCCCATGGCACTaGCATCCCTCTGGGGCCGTGGTAGTCCGGGGATAT | + |
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Preference number: 6 (lower is better) Translates to: LGSQQCLAVPWH*HPSGAVVVRGY Trigger: ATATCCCCGGACTACCACGGCCCCAGAGGGATGGCAGTGCCATGGGACAGCGAGACATTGTTGGCTTCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS CCA 72 bp | AGACTCCCAATGATGATGGCTACCGTGATCCCGGCATaGACAGGGAGGAGTGAGGAGACCTCGCGTGCACCA | + |
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Preference number: 6 (lower is better) Translates to: RLPMMMATVIPA*TGRSEETSRAP Trigger: TGGTGCACGCGAGGTCTCCTCACTCCTCCCTGTCCATGCCGGGATCACGGTAGCCATCATCATTGGGAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS TCA 72 bp | TTGTGCCTCCAGAAGCCTCCTCCCCCAGGTACCAGATaGAATCCTGAGCAGTGCTGGGAACACCGTGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: LCLQKPPPPGTR*NPEQCWEHREG Trigger: CCCTTCACGGTGTTCCCAGCACTGCTCAGGATTTCATCTGGTACCTGGGGGAGGAGGCTTCTGGAGGCACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS CCA 72 bp | GGGAGGAGTGAGGAGACCTCGCGTGCACCAGCTACATaGACGTTAATCTTGGCCTTCATTGTCCAGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GRSEETSRAPAT*TLILAFIVQAG Trigger: CCCTGCCTGGACAATGAAGGCCAAGATTAACGTCCATGTAGCTGGTGCACGCGAGGTCTCCTCACTCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS CCA 72 bp | GTTGCTGTCACCAGATTCAGGACTCAGGTTCACTTCTaGCTTCTCTGTGGCTGGATTCCTGGGGCTCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: VAVTRFRTQVHF*LLCGWIPGAPA Trigger: GGCCGGAGCCCCAGGAATCCAGCCACAGAGAAGCCAGAAGTGAACCTGAGTCCTGAATCTGGTGACAGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS CAA 90 bp | TGCCACTATCTGAAGGTTGGGCATTTCGAAGCAGCATGGAACCATTaGGGAAGCCAACAATGTCTCGCTGTCCCATGGCACTGCCATCCC | + |
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Preference number: 6 (lower is better) Translates to: CHYLKVGHFEAAWNH*GSQQCLAVPWHCHP Trigger: GGGATGGCAGTGCCATGGGACAGCGAGACATTGTTGGCTTCCCAAATGGTTCCATGCTGCTTCGAAATGCCCAACCTTCAGATAGTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS TCA 72 bp | GTTCATGGTGGCGGCCACCTGATAGGTGCCACTATCTaGAGGTTGGGCATTTCGAAGCAGCATGGAACCATT | + |
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Preference number: 6 (lower is better) Translates to: VHGGGHLIGATI*RLGISKQHGTI Trigger: AATGGTTCCATGCTGCTTCGAAATGCCCAACCTTCAGATAGTGGCACCTATCAGGTGGCCGCCACCATGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS CAA 72 bp | CTGAAGGTTGGGCATTTCGAAGCAGCATGGAACCATTaGGGAAGCCAACAATGTCTCGCTGTCCCATGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LKVGHFEAAWNH*GSQQCLAVPWH Trigger: GTGCCATGGGACAGCGAGACATTGTTGGCTTCCCAAATGGTTCCATGCTGCTTCGAAATGCCCAACCTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS CCA 72 bp | TGCCACTATCTGAAGGTTGGGCATTTCGAAGCAGCATaGAACCATTTGGGAAGCCAACAATGTCTCGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: CHYLKVGHFEAA*NHLGSQQCLAV Trigger: GACAGCGAGACATTGTTGGCTTCCCAAATGGTTCCATGCTGCTTCGAAATGCCCAACCTTCAGATAGTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS CCA 72 bp | TTGCTCCATGTCACTGATGGGAGACACCAGGAAGACTaGAGATGGCATCACTTCATAGATGTTGCTGTCACC | + |
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Preference number: 6 (lower is better) Translates to: LLHVTDGRHQED*RWHHFIDVAVT Trigger: GGTGACAGCAACATCTATGAAGTGATGCCATCTCCAGTCTTCCTGGTGTCTCCCATCAGTGACATGGAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS GCA 72 bp | CCAGGAAGACTGGAGATGGCATCACTTCATAGATGTTaGTGTCACCAGATTCAGGACTCAGGTTCACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: PGRLEMASLHRC*CHQIQDSGSLL Trigger: CAGAAGTGAACCTGAGTCCTGAATCTGGTGACAGCAACATCTATGAAGTGATGCCATCTCCAGTCTTCCTGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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| CDS CCA 72 bp | CATGTCACTGATGGGAGACACCAGGAAGACTGGAGATaGCATCACTTCATAGATGTTGCTGTCACCAGATTC | + |
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Preference number: 6 (lower is better) Translates to: HVTDGRHQEDWR*HHFIDVAVTRF Trigger: GAATCTGGTGACAGCAACATCTATGAAGTGATGCCATCTCCAGTCTTCCTGGTGTCTCCCATCAGTGACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052605.8 |
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