RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEACAM18 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030472

Ensembl transcript IDs: ENSMUST00000032663.10

Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGATGGTTCCCTTCCTGGAATGTTCCAGAGACACCTGGTGCTGGTaGAGTTCAGCCGGTCCCCACAGGAGACTCATTCTCCTTTGTCTC +
Preference number: 1 (lower is better)
Translates to: GMVPFLECSRDTWCW*SSAGPHRRLILLCL
Trigger: GAGACAAAGGAGAATGAGTCTCCTGTGGGGACCGGCTGAACTGCACCAGCACCAGGTGTCTCTGGAACATTCCAGGAAGGGAACCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
3UTR CCA 90 bp AGCCCAGATTTCTTCAGCTCACTAAACCTGGGATGGTTCCCTTCCTaGAATGTTCCAGAGACACCTGGTGCTGGTGCAGTTCAGCCGGTC +
Preference number: 1 (lower is better)
Translates to: SPDFFSSLNLGWFPS*NVPETPGAGAVQPV
Trigger: GACCGGCTGAACTGCACCAGCACCAGGTGTCTCTGGAACATTCCAGGAAGGGAACCATCCCAGGTTTAGTGAGCTGAAGAAATCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
3UTR CCA 90 bp AATTTATCCAGAAGCCCAGATTTCTTCAGCTCACTAAACCTGGGATaGTTCCCTTCCTGGAATGTTCCAGAGACACCTGGTGCTGGTGCA +
Preference number: 1 (lower is better)
Translates to: NLSRSPDFFSSLNLG*FPSWNVPETPGAGA
Trigger: TGCACCAGCACCAGGTGTCTCTGGAACATTCCAGGAAGGGAACCATCCCAGGTTTAGTGAGCTGAAGAAATCTGGGCTTCTGGATAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
3UTR-3UTR CCA 90 bp TTCCAATTTATCCAGAAGCCCAGATTTCTTCAGCTCACTAAACCTGGGATGGTTTGTTCCAGAGACACCTaGTGCTGGTGCAGTTCAGCC +
Preference number: 2 (lower is better)
Translates to: FQFIQKPRFLQLTKPGMVCSRDT*CWCSSA
Trigger: GGCTGAACTGCACCAGCACCAGGTGTCTCTGGAACA...AACCATCCCAGGTTTAGTGAGCTGAAGAAATCTGGGCTTCTGGATAAATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
3UTR CAA 90 bp AACTTAAAATGGCTTCATTTCTCTGTCATTGGTATCTGCGCATCTTaGAAGAATCTTTCAAGATCCCCTAGTGTCAGAGTAAGGATGTGG +
Preference number: 2 (lower is better)
Translates to: NLKWLHFSVIGICAS*KNLSRSPSVRVRMW
Trigger: CCACATCCTTACTCTGACACTAGGGGATCTTGAAAGATTCTTCAAAGATGCGCAGATACCAATGACAGAGAAATGAAGCCATTTTAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
3UTR CAA 90 bp AGCTTTGTGTATTCATCTATAATTAGAAGGCAACTACCTTCCTCATaGAGAAGCCTTTCTACCAGTGTGCTTCTTAAACCTGTGTGTAGG +
Preference number: 2 (lower is better)
Translates to: SFVYSSIIRRQLPSS*RSLSTSVLLKPVCR
Trigger: CCTACACACAGGTTTAAGAAGCACACTGGTAGAAAGGCTTCTCAATGAGGAAGGTAGTTGCCTTCTAATTATAGATGAATACACAAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
3UTR CCA 72 bp GGGATGGTTCCCTTCCTGGAATGTTCCAGAGACACCTaGTGCTGGTGCAGTTCAGCCGGTCCCCACAGGAGA +
Preference number: 3 (lower is better)
Translates to: GMVPFLECSRDT*CWCSSAGPHRR
Trigger: TCTCCTGTGGGGACCGGCTGAACTGCACCAGCACCAGGTGTCTCTGGAACATTCCAGGAAGGGAACCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
3UTR GCA 72 bp ATGGTTCCCTTCCTGGAATGTTCCAGAGACACCTGGTaGTGGTGCAGTTCAGCCGGTCCCCACAGGAGACTC +
Preference number: 3 (lower is better)
Translates to: MVPFLECSRDTW*WCSSAGPHRRL
Trigger: GAGTCTCCTGTGGGGACCGGCTGAACTGCACCAGCACCAGGTGTCTCTGGAACATTCCAGGAAGGGAACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
3UTR CCA 72 bp GTTCCCTTCCTGGAATGTTCCAGAGACACCTGGTGCTaGTGCAGTTCAGCCGGTCCCCACAGGAGACTCATT +
Preference number: 3 (lower is better)
Translates to: VPFLECSRDTWC*CSSAGPHRRLI
Trigger: AATGAGTCTCCTGTGGGGACCGGCTGAACTGCACCAGCACCAGGTGTCTCTGGAACATTCCAGGAAGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
3UTR TCA 72 bp GAGCTCTTACACGATCTGCCCCAGCTTGGCCAGCTCTaGTTAGCAGATGGTATTAATGGCCAGGCTCCCTGT +
Preference number: 3 (lower is better)
Translates to: ELLHDLPQLGQL*LADGINGQAPC
Trigger: ACAGGGAGCCTGGCCATTAATACCATCTGCTAATCAGAGCTGGCCAAGCTGGGGCAGATCGTGTAAGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
3UTR CCA 72 bp TGTGAGCTGCCCAACATGGGTGCTGGGAGCCCAACTTaGGATCTTTGCAAAGGCAGTATATACTCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: CELPNMGAGSPT*DLCKGSIYSSS
Trigger: GGAGGAAGAGTATATACTGCCTTTGCAAAGATCCCAAGTTGGGCTCCCAGCACCCATGTTGGGCAGCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
3UTR CCA 72 bp TTCTTCAGCTCACTAAACCTGGGATGGTTCCCTTCCTaGAATGTTCCAGAGACACCTGGTGCTGGTGCAGTT +
Preference number: 3 (lower is better)
Translates to: FFSSLNLGWFPS*NVPETPGAGAV
Trigger: AACTGCACCAGCACCAGGTGTCTCTGGAACATTCCAGGAAGGGAACCATCCCAGGTTTAGTGAGCTGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
3UTR CCA 72 bp AGAAGCCCAGATTTCTTCAGCTCACTAAACCTGGGATaGTTCCCTTCCTGGAATGTTCCAGAGACACCTGGT +
Preference number: 3 (lower is better)
Translates to: RSPDFFSSLNLG*FPSWNVPETPG
Trigger: ACCAGGTGTCTCTGGAACATTCCAGGAAGGGAACCATCCCAGGTTTAGTGAGCTGAAGAAATCTGGGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
3UTR TCA 72 bp TGTGTGTGTGTGAATGCAGTTCATGCTGAGTTCAGATaGGAGCATCAGATAACCTGTAGTTGGAGTTACAGG +
Preference number: 3 (lower is better)
Translates to: CVCVNAVHAEFR*EHQITCSWSYR
Trigger: CCTGTAACTCCAACTACAGGTTATCTGATGCTCTCATCTGAACTCAGCATGAACTGCATTCACACACACACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
3UTR-3UTR CAA 90 bp TTAAAATGGCTTCATTTCTCTGTCATTGGTATCTGCGCATCTTTGAAGAATCTTGAGACTCATTCTCCTTaGTCTCTCTCCATCATCTCC +
Preference number: 3 (lower is better)
Translates to: LKWLHFSVIGICASLKNLETHSP*SLSIIS
Trigger: GGAGATGATGGAGAGAGACAAAGGAGAATGAGTCTC...AAGATTCTTCAAAGATGCGCAGATACCAATGACAGAGAAATGAAGCCATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR TCA 90 bp CCTGGTGCTGGTGCAGTTCAGCCGGTCCCCACAGGAGACTCATTCTCCTTTGTCGGGCTGATGAAGATCTaGCCAGAAGCCTGGCAGATC +
Preference number: 4 (lower is better)
Translates to: PGAGAVQPVPTGDSFSFVGLMKI*PEAWQI
Trigger: GATCTGCCAGGCTTCTGGTCAGATCTTCATCAGCCC...GACAAAGGAGAATGAGTCTCCTGTGGGGACCGGCTGAACTGCACCAGCACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR GCA 90 bp CCTGGTGCTGGTGCAGTTCAGCCGGTCCCCACAGGAGACTCATTCTCCTTTGTCCAACACACCGGTAACTaGCCATCTGCTCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PGAGAVQPVPTGDSFSFVQHTGN*PSAPRR
Trigger: TCTCCTGGGAGCAGATGGGCAGTTACCGGTGTGTTG...GACAAAGGAGAATGAGTCTCCTGTGGGGACCGGCTGAACTGCACCAGCACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CCA 90 bp ACCTGGGATGGTTCCCTTCCTGGAATGTTCCAGAGACACCTGGTGCTGGTGCAGCAGTGGTGGCCGAGGTaGCTGGATGGTGACATCTCT +
Preference number: 4 (lower is better)
Translates to: TWDGSLPGMFQRHLVLVQQWWPR*LDGDIS
Trigger: AGAGATGTCACCATCCAGCCACCTCGGCCACCACTG...CTGCACCAGCACCAGGTGTCTCTGGAACATTCCAGGAAGGGAACCATCCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CCA 90 bp CAGAAGCCCAGATTTCTTCAGCTCACTAAACCTGGGATGGTTCCCTTCCTGGAACACAGTAGGCAGTGGTaGCCGAGGTGGCTGGATGGT +
Preference number: 4 (lower is better)
Translates to: QKPRFLQLTKPGMVPFLEHSRQW*PRWLDG
Trigger: ACCATCCAGCCACCTCGGCCACCACTGCCTACTGTG...TTCCAGGAAGGGAACCATCCCAGGTTTAGTGAGCTGAAGAAATCTGGGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR GCA 90 bp CCAGATTTCTTCAGCTCACTAAACCTGGGATGGTTCCCTTCCTGGAATGTTCCACTGGAGCCAGCCAGTTaGTCTTTGGGTCTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: PDFFSSLNLGWFPSWNVPLEPAS*SLGLVA
Trigger: AGCAACGAGACCCAAAGAGCAACTGGCTGGCTCCAG...TGGAACATTCCAGGAAGGGAACCATCCCAGGTTTAGTGAGCTGAAGAAATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR TCA 90 bp GGAGTCTTCCAATTTATCCAGAAGCCCAGATTTCTTCAGCTCACTAAACCTGGGGAGGTGGCTGGATGGTaGCATCTCTGTAGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: GVFQFIQKPRFLQLTKPGEVAGW*HLCRRS
Trigger: TGACCTTCTACAGAGATGTCACCATCCAGCCACCTC...CCCAGGTTTAGTGAGCTGAAGAAATCTGGGCTTCTGGATAAATTGGAAGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR GCA 90 bp TTCCAATTTATCCAGAAGCCCAGATTTCTTCAGCTCACTAAACCTGGGATGGTTCACCACCAGGCTACCTaGACGGGTCACATTCTCACG +
Preference number: 4 (lower is better)
Translates to: FQFIQKPRFLQLTKPGMVHHQAT*TGHILT
Trigger: CGTGAGAATGTGACCCGTGCAGGTAGCCTGGTGGTG...AACCATCCCAGGTTTAGTGAGCTGAAGAAATCTGGGCTTCTGGATAAATTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CCA 90 bp TTCAGCTCACTAAACCTGGGATGGTTCCCTTCCTGGAATGTTCCAGAGACACCTTTTCTAAGGTCAGGATaGTCCGGTACTTCTCCACTC +
Preference number: 4 (lower is better)
Translates to: FSSLNLGWFPSWNVPETPFLRSG*SGTSPL
Trigger: GAGTGGAGAAGTACCGGACCATCCTGACCTTAGAAA...AGGTGTCTCTGGAACATTCCAGGAAGGGAACCATCCCAGGTTTAGTGAGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR GCA 90 bp CAGAAGCCCAGATTTCTTCAGCTCACTAAACCTGGGATGGTTCCCTTCCTGGAACTGAGATGCCTGGATTaGTTCTCAACTTTACGATCT +
Preference number: 4 (lower is better)
Translates to: QKPRFLQLTKPGMVPFLELRCLD*FSTLRS
Trigger: AGATCGTAAAGTTGAGAAGCAATCCAGGCATCTCAG...TTCCAGGAAGGGAACCATCCCAGGTTTAGTGAGCTGAAGAAATCTGGGCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CCA 90 bp CCAGATTTCTTCAGCTCACTAAACCTGGGATGGTTCCCTTCCTGGAATGTTCCAATTCCAGCTGCACACTaGAACCAATATCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PDFFSSLNLGWFPSWNVPIPAAH*NQYQQS
Trigger: TGACTGCTGATATTGGTTCCAGTGTGCAGCTGGAAT...TGGAACATTCCAGGAAGGGAACCATCCCAGGTTTAGTGAGCTGAAGAAATCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CCA 90 bp GGAGTCTTCCAATTTATCCAGAAGCCCAGATTTCTTCAGCTCACTAAACCTGGGTATCACCAAGGGTCCTaGGATGTAGAGCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GVFQFIQKPRFLQLTKPGYHQGS*DVELSV
Trigger: AACAGAGAGCTCTACATCCCAGGACCCTTGGTGATA...CCCAGGTTTAGTGAGCTGAAGAAATCTGGGCTTCTGGATAAATTGGAAGACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CCA 90 bp AAAATGGCTTCATTTCTCTGTCATTGGTATCTGCGCATCTTTGAAGAATCTTTCAGGAAGGAGCCGTTATaGATCCAGTGGTACCTGGGC +
Preference number: 4 (lower is better)
Translates to: KMASFLCHWYLRIFEESFRKEPL*IQWYLG
Trigger: GCCCAGGTACCACTGGATCCATAACGGCTCCTTCCT...GAAAGATTCTTCAAAGATGCGCAGATACCAATGACAGAGAAATGAAGCCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CCA 90 bp TGTAGCTTTGTGTATTCATCTATAATTAGAAGGCAACTACCTTCCTCATTGAGAGTTCACAGTAGGCAGTaGTGGCCGAGGTGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: CSFVYSSIIRRQLPSSLRVHSRQ*WPRWLD
Trigger: ATCCAGCCACCTCGGCCACCACTGCCTACTGTGAAC...TCTCAATGAGGAAGGTAGTTGCCTTCTAATTATAGATGAATACACAAAGCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR GCA 90 bp TTCCAATTTATCCAGAAGCCCAGATTTCTTCAGCTCACTAAACCTGGGATGGTTTCGTCATGCGGTTACTaGCTGAGGTTGGTACAAAAT +
Preference number: 4 (lower is better)
Translates to: FQFIQKPRFLQLTKPGMVSSCGY*LRLVQN
Trigger: ATTTTGTACCAACCTCAGGCAGTAACCGCATGACGA...AACCATCCCAGGTTTAGTGAGCTGAAGAAATCTGGGCTTCTGGATAAATTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR GCA 90 bp TTGCAAAGGCAGTATATACTCTTCCTCCAGCCCCTGATCTGTTCTTTCTGTTTCCAGTTACATTCCAGCTaGACACTGGAACCAATATCA +
Preference number: 4 (lower is better)
Translates to: LQRQYILFLQPLICSFCFQLHSS*TLEPIS
Trigger: TGATATTGGTTCCAGTGTGCAGCTGGAATGTAACTG...GAAACAGAAAGAACAGATCAGGGGCTGGAGGAAGAGTATATACTGCCTTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR GCA 90 bp GTCTTCCAATTTATCCAGAAGCCCAGATTTCTTCAGCTCACTAAACCTGGGATGTGTTATTCTCTGGGATaGTTAGGAAGGAGCCGTTAT +
Preference number: 4 (lower is better)
Translates to: VFQFIQKPRFLQLTKPGMCYSLG*LGRSRY
Trigger: ATAACGGCTCCTTCCTAAGCATCCCAGAGAATAACA...CATCCCAGGTTTAGTGAGCTGAAGAAATCTGGGCTTCTGGATAAATTGGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CCA 90 bp TTAAAATGGCTTCATTTCTCTGTCATTGGTATCTGCGCATCTTTGAAGAATCTTCCAGGGCACTGGTATTaGCTGAGATGCCTGGATTGC +
Preference number: 4 (lower is better)
Translates to: LKWLHFSVIGICASLKNLPGHWY*LRCLDC
Trigger: GCAATCCAGGCATCTCAGCCAATACCAGTGCCCTGG...AAGATTCTTCAAAGATGCGCAGATACCAATGACAGAGAAATGAAGCCATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CCA 90 bp TTAAAATGGCTTCATTTCTCTGTCATTGGTATCTGCGCATCTTTGAAGAATCTTGCTCCCAGGAGAGACTaGGGAGGGTCATGTTATTCT +
Preference number: 4 (lower is better)
Translates to: LKWLHFSVIGICASLKNLAPRRD*GGSCYS
Trigger: AGAATAACATGACCCTCCCCAGTCTCTCCTGGGAGC...AAGATTCTTCAAAGATGCGCAGATACCAATGACAGAGAAATGAAGCCATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR TCA 90 bp TTGCAAAGGCAGTATATACTCTTCCTCCAGCCCCTGATCTGTTCTTTCTGTTTCTGGGAGGTTTATAGCTaGAAATCATGTTTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: LQRQYILFLQPLICSFCFWEVYS*KSCFLY
Trigger: GTACAGAAAACATGATTTTCAGCTATAAACCTCCCA...GAAACAGAAAGAACAGATCAGGGGCTGGAGGAAGAGTATATACTGCCTTTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CCA 90 bp CCTATCAGATGTAGCTTTGTGTATTCATCTATAATTAGAAGGCAACTACCTTCCGACAAGTTTTTCCTCTaGAGCAGGATTGGAACAGGC +
Preference number: 4 (lower is better)
Translates to: PIRCSFVYSSIIRRQLPSDKFFL*SRIGTG
Trigger: GCCTGTTCCAATCCTGCTCCAGAGGAAAAACTTGTC...GGAAGGTAGTTGCCTTCTAATTATAGATGAATACACAAAGCTACATCTGATAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CCA 90 bp TTCCAATTTATCCAGAAGCCCAGATTTCTTCAGCTCACTAAACCTGGGATGGTTCTAGTTGGTCTGCCATaGACACTTATGACAAGTTTT +
Preference number: 4 (lower is better)
Translates to: FQFIQKPRFLQLTKPGMVLVGLP*TLMTSF
Trigger: AAAACTTGTCATAAGTGTCCATGGCAGACCAACTAG...AACCATCCCAGGTTTAGTGAGCTGAAGAAATCTGGGCTTCTGGATAAATTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR TCA 90 bp TGTAGCTTTGTGTATTCATCTATAATTAGAAGGCAACTACCTTCCTCATTGAGAGGGATGTCAATAGGATaGGAAATATCACCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: CSFVYSSIIRRQLPSSLRGMSIG*EISPRV
Trigger: GACCCTTGGTGATATTTCTCATCCTATTGACATCCC...TCTCAATGAGGAAGGTAGTTGCCTTCTAATTATAGATGAATACACAAAGCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CCA 90 bp AAAATGGCTTCATTTCTCTGTCATTGGTATCTGCGCATCTTTGAAGAATCTTTCATCAGCTCACTTTTCTaGAGTATTTCTGGCACATCT +
Preference number: 4 (lower is better)
Translates to: KMASFLCHWYLRIFEESFISSLF*SISGTS
Trigger: AGATGTGCCAGAAATACTCCAGAAAAGTGAGCTGAT...GAAAGATTCTTCAAAGATGCGCAGATACCAATGACAGAGAAATGAAGCCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CCA 90 bp TGGGATGTAGAGCTCTCTGTTCACAGTAGGCAGTGGTGGCCGAGGTaGCTGGATGGTGACATCTCTGTAGAAGGTCAGCTGGGTCTCCGG +
Preference number: 5 (lower is better)
Translates to: WDVELSVHSRQWWPR*LDGDISVEGQLGLR
Trigger: CCGGAGACCCAGCTGACCTTCTACAGAGATGTCACCATCCAGCCACCTCGGCCACCACTGCCTACTGTGAACAGAGAGCTCTACATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CAA 90 bp ACCTGGGATGGTTCCCTTCCTGGAATGTTCCAGAGACACCTGGTGCTGGTGCAGACCAGGGCACTGGTATaGGCTGAGATGCCTGGATTG +
Preference number: 5 (lower is better)
Translates to: TWDGSLPGMFQRHLVLVQTRALV*AEMPGL
Trigger: CAATCCAGGCATCTCAGCCAATACCAGTGCCCTGGT...CTGCACCAGCACCAGGTGTCTCTGGAACATTCCAGGAAGGGAACCATCCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS TCA 90 bp GGCAACCACAGAATCCATGCCCTCCACCAGGGCACTGGTATTGGCTaGGATGCCTGGATTGCTTCTCAACTTTACGATCTGGAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: GNHRIHALHQGTGIG*DAWIASQLYDLEPA
Trigger: GGCTGGCTCCAGATCGTAAAGTTGAGAAGCAATCCAGGCATCTCAGCCAATACCAGTGCCCTGGTGGAGGGCATGGATTCTGTGGTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS GCA 90 bp CCATGCCCTCCACCAGGGCACTGGTATTGGCTGAGATGCCTGGATTaGTTCTCAACTTTACGATCTGGAGCCAGCCAGTTGCTCTTTGGG +
Preference number: 5 (lower is better)
Translates to: PCPPPGHWYWLRCLD*FSTLRSGASQLLFG
Trigger: CCCAAAGAGCAACTGGCTGGCTCCAGATCGTAAAGTTGAGAAGCAATCCAGGCATCTCAGCCAATACCAGTGCCCTGGTGGAGGGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS GCA 90 bp AGAAGGTCAGCTGGGTCTCCGGATTCTCCACAACACACCGGTAACTaGCCATCTGCTCCCAGGAGAGACTGGGGAGGGTCATGTTATTCT +
Preference number: 5 (lower is better)
Translates to: RRSAGSPDSPQHTGN*PSAPRRDWGGSCYS
Trigger: AGAATAACATGACCCTCCCCAGTCTCTCCTGGGAGCAGATGGGCAGTTACCGGTGTGTTGTGGAGAATCCGGAGACCCAGCTGACCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS GCA 90 bp CCACAGAATCCATGCCCTCCACCAGGGCACTGGTATTGGCTGAGATaGCTGGATTGCTTCTCAACTTTACGATCTGGAGCCAGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: PQNPCPPPGHWYWLR*LDCFSTLRSGASQL
Trigger: CAACTGGCTGGCTCCAGATCGTAAAGTTGAGAAGCAATCCAGGCATCTCAGCCAATACCAGTGCCCTGGTGGAGGGCATGGATTCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CAA 90 bp GGAGTTACAGGTGATTGTGAGCTGCCCAACATGGGTGCTGGGAGCCCAACTTGGGGTTACTGCCTGAGGTaGGTACAAAATTCACATACC +
Preference number: 5 (lower is better)
Translates to: GVTGDCELPNMGAGSPTWGYCLR*VQNSHT
Trigger: GGTATGTGAATTTTGTACCAACCTCAGGCAGTAACC...CCAAGTTGGGCTCCCAGCACCCATGTTGGGCAGCTCACAATCACCTGTAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS GCA 90 bp CAGTGGTACCTGGGCTCCGGCTTGGAGAAACAGTTACATTCCAGCTaGACACTGGAACCAATATCAGCAGTCAGCACACCAGCAAAGAAA +
Preference number: 5 (lower is better)
Translates to: QWYLGSGLEKQLHSS*TLEPISAVSTPAKK
Trigger: TTTCTTTGCTGGTGTGCTGACTGCTGATATTGGTTCCAGTGTGCAGCTGGAATGTAACTGTTTCTCCAAGCCGGAGCCCAGGTACCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CCA 90 bp CTGGTATTGGCTGAGATGCCTGGATTGCTTCTCAACTTTACGATCTaGAGCCAGCCAGTTGCTCTTTGGGTCTCGTTGCTAGTGTCCACT +
Preference number: 5 (lower is better)
Translates to: LVLAEMPGLLLNFTI*SQPVALWVSLLVST
Trigger: AGTGGACACTAGCAACGAGACCCAAAGAGCAACTGGCTGGCTCCAGATCGTAAAGTTGAGAAGCAATCCAGGCATCTCAGCCAATACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CAA 90 bp TTCAGCTCACTAAACCTGGGATGGTTCCCTTCCTGGAATGTTCCAGAGACACCTATGTTTTCTGTACTGTaGTCCTTGCCCCGATACCAG +
Preference number: 5 (lower is better)
Translates to: FSSLNLGWFPSWNVPETPMFSVL*SLPRYQ
Trigger: CTGGTATCGGGGCAAGGACAACAGTACAGAAAACAT...AGGTGTCTCTGGAACATTCCAGGAAGGGAACCATCCCAGGTTTAGTGAGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CAA 90 bp GTCTTCCAATTTATCCAGAAGCCCAGATTTCTTCAGCTCACTAAACCTGGGATGCCAGCCAGTTGCTCTTaGGGTCTCGTTGCTAGTGTC +
Preference number: 5 (lower is better)
Translates to: VFQFIQKPRFLQLTKPGMPASCS*GLVASV
Trigger: GACACTAGCAACGAGACCCAAAGAGCAACTGGCTGG...CATCCCAGGTTTAGTGAGCTGAAGAAATCTGGGCTTCTGGATAAATTGGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS TCA 90 bp GATCAGAGTCTTGCCATCCGGGGAAATCGTCATGCGGTTACTGCCTaGGGTTGGTACAAAATTCACATACCAACTGATGTTCGAGGAGTT +
Preference number: 5 (lower is better)
Translates to: DQSLAIRGNRHAVTA*GWYKIHIPTDVRGV
Trigger: AACTCCTCGAACATCAGTTGGTATGTGAATTTTGTACCAACCTCAGGCAGTAACCGCATGACGATTTCCCCGGATGGCAAGACTCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS GCA 90 bp GATGCCTGGATTGCTTCTCAACTTTACGATCTGGAGCCAGCCAGTTaGTCTTTGGGTCTCGTTGCTAGTGTCCACTTCAACAGTATAGTA +
Preference number: 5 (lower is better)
Translates to: DAWIASQLYDLEPAS*SLGLVASVHFNSIV
Trigger: TACTATACTGTTGAAGTGGACACTAGCAACGAGACCCAAAGAGCAACTGGCTGGCTCCAGATCGTAAAGTTGAGAAGCAATCCAGGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CAA 90 bp TTGCAAAGGCAGTATATACTCTTCCTCCAGCCCCTGATCTGTTCTTTCTGTTTCGCTGAGATGCCTGGATaGCTTCTCAACTTTACGATC +
Preference number: 5 (lower is better)
Translates to: LQRQYILFLQPLICSFCFAEMPG*LLNFTI
Trigger: GATCGTAAAGTTGAGAAGCAATCCAGGCATCTCAGC...GAAACAGAAAGAACAGATCAGGGGCTGGAGGAAGAGTATATACTGCCTTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS-3UTR CAA 90 bp GGAGTCTTCCAATTTATCCAGAAGCCCAGATTTCTTCAGCTCACTAAACCTGGGGAGTTGGTAAGACATTaGGCAACCACAGAATCCATG +
Preference number: 5 (lower is better)
Translates to: GVFQFIQKPRFLQLTKPGELVRH*ATTESM
Trigger: CATGGATTCTGTGGTTGCCAAATGTCTTACCAACTC...CCCAGGTTTAGTGAGCTGAAGAAATCTGGGCTTCTGGATAAATTGGAAGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CCA 90 bp ATAGGCCACAGTCAATTGAATCAGCTCACTTTTCTGGAGTATTTCTaGCACATCTTCTATGGCACACTGAAGAGTGTGGTCATAACGACT +
Preference number: 5 (lower is better)
Translates to: IGHSQLNQLTFLEYF*HIFYGTLKSVVITT
Trigger: AGTCGTTATGACCACACTCTTCAGTGTGCCATAGAAGATGTGCCAGAAATACTCCAGAAAAGTGAGCTGATTCAATTGACTGTGGCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS GCA 72 bp GCTGGGTCTCCGGATTCTCCACAACACACCGGTAACTaGCCATCTGCTCCCAGGAGAGACTGGGGAGGGTCA +
Preference number: 6 (lower is better)
Translates to: AGSPDSPQHTGN*PSAPRRDWGGS
Trigger: TGACCCTCCCCAGTCTCTCCTGGGAGCAGATGGGCAGTTACCGGTGTGTTGTGGAGAATCCGGAGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS GCA 72 bp GTCATTTACCGCCGACATCCTCACCACCAGGCTACCTaGACGGGTCACATTCTCACGTCCACTGTACGAGGG +
Preference number: 6 (lower is better)
Translates to: VIYRRHPHHQAT*TGHILTSTVRG
Trigger: CCCTCGTACAGTGGACGTGAGAATGTGACCCGTGCAGGTAGCCTGGTGGTGAGGATGTCGGCGGTAAATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CCA 72 bp GAGCTCTCTGTTCACAGTAGGCAGTGGTGGCCGAGGTaGCTGGATGGTGACATCTCTGTAGAAGGTCAGCTG +
Preference number: 6 (lower is better)
Translates to: ELSVHSRQWWPR*LDGDISVEGQL
Trigger: CAGCTGACCTTCTACAGAGATGTCACCATCCAGCCACCTCGGCCACCACTGCCTACTGTGAACAGAGAGCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS GCA 72 bp CCATGCCCTCCACCAGGGCACTGGTATTGGCTGAGATaGCTGGATTGCTTCTCAACTTTACGATCTGGAGCC +
Preference number: 6 (lower is better)
Translates to: PCPPPGHWYWLR*LDCFSTLRSGA
Trigger: GGCTCCAGATCGTAAAGTTGAGAAGCAATCCAGGCATCTCAGCCAATACCAGTGCCCTGGTGGAGGGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CAA 90 bp TCCATGCCCTCCACCAGGGCACTGGTATTGGCTGAGATGCCTGGATaGCTTCTCAACTTTACGATCTGGAGCCAGCCAGTTGCTCTTTGG +
Preference number: 6 (lower is better)
Translates to: SMPSTRALVLAEMPG*LLNFTIWSQPVALW
Trigger: CCAAAGAGCAACTGGCTGGCTCCAGATCGTAAAGTTGAGAAGCAATCCAGGCATCTCAGCCAATACCAGTGCCCTGGTGGAGGGCATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS GCA 72 bp CCACCAGGGCACTGGTATTGGCTGAGATGCCTGGATTaGTTCTCAACTTTACGATCTGGAGCCAGCCAGTTG +
Preference number: 6 (lower is better)
Translates to: PPGHWYWLRCLD*FSTLRSGASQL
Trigger: CAACTGGCTGGCTCCAGATCGTAAAGTTGAGAAGCAATCCAGGCATCTCAGCCAATACCAGTGCCCTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CCA 72 bp TGGCAACCACAGAATCCATGCCCTCCACCAGGGCACTaGTATTGGCTGAGATGCCTGGATTGCTTCTCAACT +
Preference number: 6 (lower is better)
Translates to: WQPQNPCPPPGH*YWLRCLDCFST
Trigger: AGTTGAGAAGCAATCCAGGCATCTCAGCCAATACCAGTGCCCTGGTGGAGGGCATGGATTCTGTGGTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CCA 72 bp AGCCGTTATGGATCCAGTGGTACCTGGGCTCCGGCTTaGAGAAACAGTTACATTCCAGCTGCACACTGGAAC +
Preference number: 6 (lower is better)
Translates to: SRYGSSGTWAPA*RNSYIPAAHWN
Trigger: GTTCCAGTGTGCAGCTGGAATGTAACTGTTTCTCCAAGCCGGAGCCCAGGTACCACTGGATCCATAACGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CAA 72 bp GAGCCGTTATGGATCCAGTGGTACCTGGGCTCCGGCTaGGAGAAACAGTTACATTCCAGCTGCACACTGGAA +
Preference number: 6 (lower is better)
Translates to: EPLWIQWYLGSG*EKQLHSSCTLE
Trigger: TTCCAGTGTGCAGCTGGAATGTAACTGTTTCTCCAAGCCGGAGCCCAGGTACCACTGGATCCATAACGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CCA 72 bp TCTGGGATGCTTAGGAAGGAGCCGTTATGGATCCAGTaGTACCTGGGCTCCGGCTTGGAGAAACAGTTACAT +
Preference number: 6 (lower is better)
Translates to: SGMLRKEPLWIQ*YLGSGLEKQLH
Trigger: ATGTAACTGTTTCTCCAAGCCGGAGCCCAGGTACCACTGGATCCATAACGGCTCCTTCCTAAGCATCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CAA 90 bp CATTTGGCAACCACAGAATCCATGCCCTCCACCAGGGCACTGGTATaGGCTGAGATGCCTGGATTGCTTCTCAACTTTACGATCTGGAGC +
Preference number: 6 (lower is better)
Translates to: HLATTESMPSTRALV*AEMPGLLLNFTIWS
Trigger: GCTCCAGATCGTAAAGTTGAGAAGCAATCCAGGCATCTCAGCCAATACCAGTGCCCTGGTGGAGGGCATGGATTCTGTGGTTGCCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CAA 90 bp GGTCTGCCATGGACACTTATGACAAGTTTTTCCTCTGGAGCAGGATaGGAACAGGCTGTAGACCAGGACTCGACACACAAAGGCACCTCC +
Preference number: 6 (lower is better)
Translates to: GLPWTLMTSFSSGAG*EQAVDQDSTHKGTS
Trigger: GGAGGTGCCTTTGTGTGTCGAGTCCTGGTCTACAGCCTGTTCCAATCCTGCTCCAGAGGAAAAACTTGTCATAAGTGTCCATGGCAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS TCA 72 bp AGAATCCATGCCCTCCACCAGGGCACTGGTATTGGCTaGGATGCCTGGATTGCTTCTCAACTTTACGATCTG +
Preference number: 6 (lower is better)
Translates to: RIHALHQGTGIG*DAWIASQLYDL
Trigger: CAGATCGTAAAGTTGAGAAGCAATCCAGGCATCTCAGCCAATACCAGTGCCCTGGTGGAGGGCATGGATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CCA 72 bp CCAGGACATCTTCTGGGACATTTTCTAAGGTCAGGATaGTCCGGTACTTCTCCACTCCTAAGAGTGAGTCTG +
Preference number: 6 (lower is better)
Translates to: PGHLLGHFLRSG*SGTSPLLRVSL
Trigger: CAGACTCACTCTTAGGAGTGGAGAAGTACCGGACCATCCTGACCTTAGAAAATGTCCCAGAAGATGTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CCA 72 bp TGGTCTGCCATGGACACTTATGACAAGTTTTTCCTCTaGAGCAGGATTGGAACAGGCTGTAGACCAGGACTC +
Preference number: 6 (lower is better)
Translates to: WSAMDTYDKFFL*SRIGTGCRPGL
Trigger: GAGTCCTGGTCTACAGCCTGTTCCAATCCTGCTCCAGAGGAAAAACTTGTCATAAGTGTCCATGGCAGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS TCA 72 bp AGGGTCCAGGGTGTCGGGTATTGGGAGGTTTATAGCTaGAAATCATGTTTTCTGTACTGTTGTCCTTGCCCC +
Preference number: 6 (lower is better)
Translates to: RVQGVGYWEVYS*KSCFLYCCPCP
Trigger: GGGGCAAGGACAACAGTACAGAAAACATGATTTTCAGCTATAAACCTCCCAATACCCGACACCCTGGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS GCA 72 bp ATTGCTTCTCAACTTTACGATCTGGAGCCAGCCAGTTaGTCTTTGGGTCTCGTTGCTAGTGTCCACTTCAAC +
Preference number: 6 (lower is better)
Translates to: IASQLYDLEPAS*SLGLVASVHFN
Trigger: GTTGAAGTGGACACTAGCAACGAGACCCAAAGAGCAACTGGCTGGCTCCAGATCGTAAAGTTGAGAAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CAA 90 bp CCTGAGGTTGGTACAAAATTCACATACCAACTGATGTTCGAGGAGTaGGTAAGACATTTGGCAACCACAGAATCCATGCCCTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: PEVGTKFTYQLMFEE*VRHLATTESMPSTR
Trigger: CCTGGTGGAGGGCATGGATTCTGTGGTTGCCAAATGTCTTACCAACTCCTCGAACATCAGTTGGTATGTGAATTTTGTACCAACCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CAA 90 bp ACAAAATTCACATACCAACTGATGTTCGAGGAGTTGGTAAGACATTaGGCAACCACAGAATCCATGCCCTCCACCAGGGCACTGGTATTG +
Preference number: 6 (lower is better)
Translates to: TKFTYQLMFEELVRH*ATTESMPSTRALVL
Trigger: CAATACCAGTGCCCTGGTGGAGGGCATGGATTCTGTGGTTGCCAAATGTCTTACCAACTCCTCGAACATCAGTTGGTATGTGAATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10
CDS CAA 72 bp TGGACACTTATGACAAGTTTTTCCTCTGGAGCAGGATaGGAACAGGCTGTAGACCAGGACTCGACACACAAA +
Preference number: 6 (lower is better)
Translates to: WTLMTSFSSGAG*EQAVDQDSTHK
Trigger: TTTGTGTGTCGAGTCCTGGTCTACAGCCTGTTCCAATCCTGCTCCAGAGGAAAAACTTGTCATAAGTGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032663.10