Pregenerated sensors for CEACAM16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014686Ensembl transcript IDs: ENSMUST00000014830.8, ENSMUST00000208198.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGGAGGCAGGATGGCGGGACCATGGCCGGCATCCGTGCTGCAGGTaGGCGGTCCTGGGCTCAGGGGCGGATGCGGGGAGATGCTGCAAG | + |
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Preference number: 1 (lower is better) Translates to: MEAGWRDHGRHPCCR*AVLGSGADAGRCCK Trigger: CTTGCAGCATCTCCCCGCATCCGCCCCTGAGCCCAGGACCGCTCACCTGCAGCACGGATGCCGGCCATGGTCCCGCCATCCTGCCTCCAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| 3UTR TCA 72 bp | GGATGGCGGGACCATGGCCGGCATCCGTGCTGCAGGTaGGCGGTCCTGGGCTCAGGGGCGGATGCGGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: GWRDHGRHPCCR*AVLGSGADAGR Trigger: TCTCCCCGCATCCGCCCCTGAGCCCAGGACCGCTCACCTGCAGCACGGATGCCGGCCATGGTCCCGCCATCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| 3UTR CCA 72 bp | ACCATGGCCGGCATCCGTGCTGCAGGTGAGCGGTCCTaGGCTCAGGGGCGGATGCGGGGAGATGCTGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: TMAGIRAAGERS*AQGRMRGDAAR Trigger: CCTTGCAGCATCTCCCCGCATCCGCCCCTGAGCCCAGGACCGCTCACCTGCAGCACGGATGCCGGCCATGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| 3UTR CCA 72 bp | TTGGCAGCTCTCCCACAGCTCGGCGCTAAGACTAGATaGAGGCAGGATGGCGGGACCATGGCCGGCATCCGT | + |
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Preference number: 3 (lower is better) Translates to: LAALPQLGAKTR*RQDGGTMAGIR Trigger: ACGGATGCCGGCCATGGTCCCGCCATCCTGCCTCCATCTAGTCTTAGCGCCGAGCTGTGGGAGAGCTGCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014830.8 ENSMUST00000208198.2 |
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| CDS-3UTR TCA 90 bp | GGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGAGGCGGCGGCTGACGGCAGCTGGCTaGGCAGTCGGTTGGGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: GAFLSRSQRPALQLKRRRLTAAG*AVGWVP Trigger: CGGAACCCAACCGACTGCTCAGCCAGCTGCCGTCAG...CCGCCGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR GCA 90 bp | GGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGAGGCGGCGGTGCACCTGCCTCCTCCCTaGGGACGCCATGCCGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: GVSLQVSAACAAAEEAAVHLPPP*GRHAGS Trigger: TGACCCGGCATGGCGTCCGCAGGGAGGAGGCAGGTG...CACCGCCGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR GCA 90 bp | GGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGAGGCGGCGGTGGCACTGGTAGGCACCTaGCTCCTCCCTGCGGACGCC | + |
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Preference number: 4 (lower is better) Translates to: GVSLQVSAACAAAEEAAVALVGT*LLPADA Trigger: GGCGTCCGCAGGGAGGAGGCAGGTGCCTACCAGTGC...CACCGCCGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR GCA 90 bp | GCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGAGGCGACCTCCCGGCCTGTGTaGGCCGGGCCAGCGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: ARGVSLQVSAACAAAEEATSRPV*AGPAIQ Trigger: CTGGATCGCTGGCCCGGCGCACACAGGCCGGGAGGT...CGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR TCA 90 bp | GATGCGGGGAGATGCTGCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCGTGCAGGCTCGGGGGTaGTGGAGATCTCGGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: DAGRCCKGRFSPGLSGLRVQARG*WRSRPQ Trigger: CTGGGGCCGAGATCTCCATCACCCCCGAGCCTGCAC...GCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGCAGCATCTCCCCGCATC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR TCA 90 bp | GGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGAGGCGGCGGAGCGATCCAGTTCCCTaGCGGCAGCTGGCTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GAFLSRSQRPALQLKRRRSDPVP*RQLAEQ Trigger: CTGCTCAGCCAGCTGCCGTCAGGGAACTGGATCGCT...CCGCCGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR GCA 90 bp | GGGAGATGCTGCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCGCCGGGTCAGCATCCTaGCATCGGGGGACATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GRCCKGRFSPGLSGLRCSAGSAS*HRGTCP Trigger: TGGGCATGTCCCCCGATGGCAGGATGCTGACCCGGC...GCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGCAGCATCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR CCA 90 bp | GCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGAGGCGGGACCTCAGCGGGGCTaGGGCTGCTACAGACGAGAC | + |
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Preference number: 4 (lower is better) Translates to: ARGVSLQVSAACAAAEEAGPQRG*GCYRRD Trigger: GTCTCGTCTGTAGCAGCCCCAGCCCCGCTGAGGTCC...CGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR TCA 90 bp | GGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGAGGCGGCGGCAGCTTGACTACCACTaGGGCAGAGCCAGACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GAFLSRSQRPALQLKRRRQLDYH*GRARQQ Trigger: CTGCTGTCTGGCTCTGCCTCAGTGGTAGTCAAGCTG...CCGCCGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR CCA 90 bp | GGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGAGGCGGCGGGTCCTGGCCCTCCGTTaGCTTAGTCGGTACAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: GAFLSRSQRPALQLKRRRVLALR*LSRYRN Trigger: GTTCCTGTACCGACTAAGCCAACGGAGGGCCAGGAC...CCGCCGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR CCA 90 bp | GCGGGGAGATGCTGCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCGTCAGGGTCACGTCCTaGCCCTCCGTTGGCTTAGTC | + |
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Preference number: 4 (lower is better) Translates to: AGRCCKGRFSPGLSGLRCVRVTS*PSVGLV Trigger: GACTAAGCCAACGGAGGGCCAGGACGTGACCCTGAC...GCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGCAGCATCTCCCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR TCA 90 bp | GGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGAGGCGGCGGTGCATGGACTACCAGCGTaGCATTGTCCCCCTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GVSLQVSAACAAAEEAAVHGLPA*HCPPLQ Trigger: CTGCAGAGGGGGACAATGTCACGCTGGTAGTCCATG...CACCGCCGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR TCA 90 bp | GGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGAGGCGGCGGTGGGCAAGCAGTTCCCCTaGAAGCCCATGGACTACCAG | + |
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Preference number: 4 (lower is better) Translates to: GVSLQVSAACAAAEEAAVGKQFP*KPMDYQ Trigger: CTGGTAGTCCATGGGCTTTCAGGGGAACTGCTTGCC...CACCGCCGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR TCA 90 bp | GCGGGGAGATGCTGCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCGCAGAGCGTCACCATTaGAGAACCAGCGGACCTCAG | + |
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Preference number: 4 (lower is better) Translates to: AGRCCKGRFSPGLSGLRCAERHH*RTSGPQ Trigger: CTGAGGTCCGCTGGTTCTTCAATGGTGACGCTCTGC...GCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGCAGCATCTCCCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR CCA 90 bp | GCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGAGGCGTTCCCTGACGGCAGCTaGCTGAGCAGTCGGTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: ARGVSLQVSAACAAAEEAFPDGS*LSSRLG Trigger: ACCCAACCGACTGCTCAGCCAGCTGCCGTCAGGGAA...CGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR TCA 90 bp | GGGAGATGCTGCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTCAGGATCCAGGCACTaGGGAGGAACCAGCTGTACC | + |
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Preference number: 4 (lower is better) Translates to: GRCCKGRFSPGLSGLRCSSGSRH*GGTSCT Trigger: GGTACAGCTGGTTCCTCCTCAGTGCCTGGATCCTGA...GCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGCAGCATCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR TCA 90 bp | GCGGGGAGATGCTGCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCCTGCAGTCATACTGCTaGTGTTCAGGTGATCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: AGRCCKGRFSPGLSGLRCLQSYC*CSGDPG Trigger: GCCAGGATCACCTGAACATCAGCAGTATGACTGCAG...GCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGCAGCATCTCCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR GCA 90 bp | TGCGGGGAGATGCTGCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGTCTGCAGGATGTAGGTaGCTGTGTGCCCAGGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: CGEMLQGAFLSRSQRPALSAGCR*LCAQVR Trigger: CCTTACCTGGGCACACAGGCACCTACATCCTGCAGA...CAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGCAGCATCTCCCCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR CCA 90 bp | GCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGAGGCGTCCCCTGAAAGCCCATaGACTACCAGCGTGACATTG | + |
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Preference number: 4 (lower is better) Translates to: ARGVSLQVSAACAAAEEASPESP*TTSVTL Trigger: CAATGTCACGCTGGTAGTCCATGGGCTTTCAGGGGA...CGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR TCA 90 bp | GATGCGGGGAGATGCTGCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCCTGCTGATGTTCAGGTaGTCCTGGCCATTCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: DAGRCCKGRFSPGLSGLRLLMFR*SWPFFK Trigger: CTTGAAGAATGGCCAGGATCACCTGAACATCAGCAG...GCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGCAGCATCTCCCCGCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR GCA 90 bp | GATGCTGCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGTGAGGTTCAGCTTTTaGACCAGCAGTGAGCAATTA | + |
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Preference number: 4 (lower is better) Translates to: DAARGVSLQVSAACAAAEVRFSF*TSSEQL Trigger: TAATTGCTCACTGCTGGTGCAAAAGCTGAACCTCAC...TTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGCAGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS TCA 90 bp | GCCCACCTCCCGGCCTGTGTGCGCCGGGCCAGCGATCCAGTTCCCTaGCGGCAGCTGGCTGAGCAGTCGGTTGGGTTCCGAGGCAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: AHLPACVRRASDPVP*RQLAEQSVGFRGRS Trigger: GGACCTGCCTCGGAACCCAACCGACTGCTCAGCCAGCTGCCGTCAGGGAACTGGATCGCTGGCCCGGCGCACACAGGCCGGGAGGTGGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS GCA 90 bp | AGGCACCTGCCTCCTCCCTGCGGACGCCATGCCGGGTCAGCATCCTaGCATCGGGGGACATGCCCAAGCGGACGGCAACTGGCAGAGCGT | + |
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Preference number: 5 (lower is better) Translates to: RHLPPPCGRHAGSAS*HRGTCPSGRQLAER Trigger: ACGCTCTGCCAGTTGCCGTCCGCTTGGGCATGTCCCCCGATGGCAGGATGCTGACCCGGCATGGCGTCCGCAGGGAGGAGGCAGGTGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS GCA 90 bp | GCGGCTGACGCTGACGGGGTTCCACACCTCGCACTGGTAGGCACCTaGCTCCTCCCTGCGGACGCCATGCCGGGTCAGCATCCTGCCATC | + |
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Preference number: 5 (lower is better) Translates to: AADADGVPHLALVGT*LLPADAMPGQHPAI Trigger: GATGGCAGGATGCTGACCCGGCATGGCGTCCGCAGGGAGGAGGCAGGTGCCTACCAGTGCGAGGTGTGGAACCCCGTCAGCGTCAGCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS GCA 90 bp | CGGGGAGATGCTGCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTaGGCTGCAGCTGAAGAGGCGGCGGTGGCTACTCCAGGGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RGDAARGVSLQVSAA*AAAEEAAVATPGQA Trigger: TGCCTGCCCTGGAGTAGCCACCGCCGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGCAGCATCTCCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208198.2 |
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| CDS CCA 90 bp | CGGCCTGTGTGCGCCGGGCCAGCGATCCAGTTCCCTGACGGCAGCTaGCTGAGCAGTCGGTTGGGTTCCGAGGCAGGTCCACGATACCAG | + |
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Preference number: 5 (lower is better) Translates to: RPVCAGPAIQFPDGS*LSSRLGSEAGPRYQ Trigger: CTGGTATCGTGGACCTGCCTCGGAACCCAACCGACTGCTCAGCCAGCTGCCGTCAGGGAACTGGATCGCTGGCCCGGCGCACACAGGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR CAA 90 bp | GGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGAGGCGGCGGTGGCTGAGCAGTCGGTaGGGTTCCGAGGCAGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: GAFLSRSQRPALQLKRRRWLSSR*GSEAGP Trigger: TGGACCTGCCTCGGAACCCAACCGACTGCTCAGCCA...CCGCCGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR CAA 90 bp | TGCGGGGAGATGCTGCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGGTCCCCCTCTGCAGGTaGTGCAGGCTCGGGGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: CGEMLQGAFLSRSQRPALVPLCR*CRLGGD Trigger: ATCACCCCCGAGCCTGCACAACCTGCAGAGGGGGAC...CAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGCAGCATCTCCCCGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS TCA 90 bp | CTGTGTGCGCCGGGCCAGCGATCCAGTTCCCTGACGGCAGCTGGCTaGGCAGTCGGTTGGGTTCCGAGGCAGGTCCACGATACCAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: LCAPGQRSSSLTAAG*AVGWVPRQVHDTRH Trigger: ATGCCTGGTATCGTGGACCTGCCTCGGAACCCAACCGACTGCTCAGCCAGCTGCCGTCAGGGAACTGGATCGCTGGCCCGGCGCACACAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS CCA 90 bp | AGGCGGCGGTGGCTACTCCAGGGCAGGCATAGACTAGCAGGTCCTTaGGGTAGCCCTGGACAGTCAGGGTCACGTCCTGGCCCTCCGTTG | + |
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Preference number: 5 (lower is better) Translates to: RRRWLLQGRHRLAGP*GSPGQSGSRPGPPL Trigger: CAACGGAGGGCCAGGACGTGACCCTGACTGTCCAGGGCTACCCCAAGGACCTGCTAGTCTATGCCTGCCCTGGAGTAGCCACCGCCGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208198.2 |
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| CDS CCA 90 bp | GGTCAGCATCCTGCCATCGGGGGACATGCCCAAGCGGACGGCAACTaGCAGAGCGTCACCATTGAAGAACCAGCGGACCTCAGCGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: GQHPAIGGHAQADGN*QSVTIEEPADLSGA Trigger: AGCCCCGCTGAGGTCCGCTGGTTCTTCAATGGTGACGCTCTGCCAGTTGCCGTCCGCTTGGGCATGTCCCCCGATGGCAGGATGCTGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR CAA 90 bp | GGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGAGGCGGCGGTGGGCAGAGCGTCACCATaGAAGAACCAGCGGACCTCA | + |
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Preference number: 5 (lower is better) Translates to: GVSLQVSAACAAAEEAAVGRASP*KNQRTS Trigger: TGAGGTCCGCTGGTTCTTCAATGGTGACGCTCTGCC...CACCGCCGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS GCA 90 bp | TGTAGGTGCCTGTGTGCCCAGGTAAGGCACCATGGATATCAAGGCTaGCATCAGGACGGACAGCTTCCCGCCCTGTGTGGGCTGGTCCGG | + |
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Preference number: 5 (lower is better) Translates to: CRCLCAQVRHHGYQG*HQDGQLPALCGLVR Trigger: CCGGACCAGCCCACACAGGGCGGGAAGCTGTCCGTCCTGATGGCAGCCTTGATATCCATGGTGCCTTACCTGGGCACACAGGCACCTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS CCA 90 bp | GTTCCGAGGCAGGTCCACGATACCAGGCATAGACTAGCAGGTCCTTaGGGTAGCCCTGGACAGTCAGGGTCACGTCCTGGCCCTCCGTTG | + |
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Preference number: 5 (lower is better) Translates to: VPRQVHDTRHRLAGP*GSPGQSGSRPGPPL Trigger: CAACGGAGGGCCAGGACGTGACCCTGACTGTCCAGGGCTACCCCAAGGACCTGCTAGTCTATGCCTGGTATCGTGGACCTGCCTCGGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS TCA 90 bp | GACGAAGGGTATCCCTACGCTCCACCAGCGCAGTGTCGTTGGCCATaGCCGTGGGAGGGGCCAGGATCTCATAGACCTGCATGTGTCCGT | + |
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Preference number: 5 (lower is better) Translates to: DEGYPYAPPAQCRWP*PWEGPGSHRPACVR Trigger: ACGGACACATGCAGGTCTATGAGATCCTGGCCCCTCCCACGGTCATGGCCAACGACACTGCGCTGGTGGAGCGTAGGGATACCCTTCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS CCA 90 bp | ATCAAGGCTGCCATCAGGACGGACAGCTTCCCGCCCTGTGTGGGCTaGTCCGGGGGTCTCATCACCAGTGCTGACAATGTAACTGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: IKAAIRTDSFPPCVG*SGGLITSADNVTGH Trigger: GTGGCCAGTTACATTGTCAGCACTGGTGATGAGACCCCCGGACCAGCCCACACAGGGCGGGAAGCTGTCCGTCCTGATGGCAGCCTTGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS CCA 90 bp | CTTGGGGTAGCCCTGGACAGTCAGGGTCACGTCCTGGCCCTCCGTTaGCTTAGTCGGTACAGGAACGATCATCATGGCTACAGCTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: LGVALDSQGHVLALR*LSRYRNDHHGYSCR Trigger: GCGGCAGCTGTAGCCATGATGATCGTTCCTGTACCGACTAAGCCAACGGAGGGCCAGGACGTGACCCTGACTGTCCAGGGCTACCCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014830.8 ENSMUST00000208198.2 |
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| CDS TCA 90 bp | GCTGAGCGTAGGCCCTGCGTACCAATTGTAGGCAAGCAGTTCCCCTaGAAGCCCATGGACTACCAGCGTGACATTGTCCCCCTCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: AERRPCVPIVGKQFP*KPMDYQRDIVPLCR Trigger: CCTGCAGAGGGGGACAATGTCACGCTGGTAGTCCATGGGCTTTCAGGGGAACTGCTTGCCTACAATTGGTACGCAGGGCCTACGCTCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS CCA 90 bp | AAGGATAGCTACTCGTTCAGGGCCGAAGTATACCGTCAAGTTCAGTaGCTCGCTGCGGCTGACGCTGACGGGGTTCCACACCTCGCACTG | + |
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Preference number: 5 (lower is better) Translates to: KDSYSFRAEVYRQVQ*LAAADADGVPHLAL Trigger: CAGTGCGAGGTGTGGAACCCCGTCAGCGTCAGCCGCAGCGAGCCACTGAACTTGACGGTATACTTCGGCCCTGAACGAGTAGCTATCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS-3UTR CAA 90 bp | GGCGTTTCTCTCCAGGTCTCAGCGGCCTGCGCTGCAGCTGAAGAGGCGGCGGTGAGGGTGAGGGACATGTaGAAGTCCACTTTAATAGTG | + |
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Preference number: 5 (lower is better) Translates to: GVSLQVSAACAAAEEAAVRVRDM*KSTLIV Trigger: CACTATTAAAGTGGACTTCAACATGTCCCTCACCCT...CACCGCCGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS TCA 90 bp | TCGGTACAGGAACGATCATCATGGCTACAGCTGCCGCGGACAGCTTaGCTACCACTGAGGCAGAGCCAGACAGCAGCGTCTTGGAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SVQERSSWLQLPRTA*LPLRQSQTAASWSS Trigger: AGAACTCCAAGACGCTGCTGTCTGGCTCTGCCTCAGTGGTAGTCAAGCTGTCCGCGGCAGCTGTAGCCATGATGATCGTTCCTGTACCGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014830.8 ENSMUST00000208198.2 |
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| CDS TCA 90 bp | GTGTACGTGCCCTCATGGGCTGCAGTCATACTGCTGATGTTCAGGTaGTCCTGGCCATTCTTCAAGGCCTTTCCATTGAAGGCCCACACG | + |
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Preference number: 5 (lower is better) Translates to: VYVPSWAAVILLMFR*SWPFFKAFPLKAHT Trigger: CGTGTGGGCCTTCAATGGAAAGGCCTTGAAGAATGGCCAGGATCACCTGAACATCAGCAGTATGACTGCAGCCCATGAGGGCACGTACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014830.8 ENSMUST00000208198.2 |
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| CDS GCA 90 bp | CGTCTTGGAGTTCTTAGCGATGCACGTGTACGTGCCCTCATGGGCTaGAGTCATACTGCTGATGTTCAGGTGATCCTGGCCATTCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: RLGVLSDARVRALMG*SHTADVQVILAILQ Trigger: TTGAAGAATGGCCAGGATCACCTGAACATCAGCAGTATGACTGCAGCCCATGAGGGCACGTACACGTGCATCGCTAAGAACTCCAAGACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014830.8 ENSMUST00000208198.2 |
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| CDS TCA 90 bp | TTGAAGTCCACTTTAATAGTGCAGCCCGTGCGGGTGGTAGAGTCTTaGAGGATAGCTACTCGTTCAGGGCCGAAGTATACCGTCAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LKSTLIVQPVRVVES*RIATRSGPKYTVKF Trigger: GAACTTGACGGTATACTTCGGCCCTGAACGAGTAGCTATCCTTCAAGACTCTACCACCCGCACGGGCTGCACTATTAAAGTGGACTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS TCA 72 bp | CCGGCCTGTGTGCGCCGGGCCAGCGATCCAGTTCCCTaGCGGCAGCTGGCTGAGCAGTCGGTTGGGTTCCGA | + |
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Preference number: 6 (lower is better) Translates to: PACVRRASDPVP*RQLAEQSVGFR Trigger: TCGGAACCCAACCGACTGCTCAGCCAGCTGCCGTCAGGGAACTGGATCGCTGGCCCGGCGCACACAGGCCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS GCA 72 bp | CCTCCTCCCTGCGGACGCCATGCCGGGTCAGCATCCTaGCATCGGGGGACATGCCCAAGCGGACGGCAACTG | + |
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Preference number: 6 (lower is better) Translates to: PPPCGRHAGSAS*HRGTCPSGRQL Trigger: CAGTTGCCGTCCGCTTGGGCATGTCCCCCGATGGCAGGATGCTGACCCGGCATGGCGTCCGCAGGGAGGAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS GCA 72 bp | GCTGACGGGGTTCCACACCTCGCACTGGTAGGCACCTaGCTCCTCCCTGCGGACGCCATGCCGGGTCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: ADGVPHLALVGT*LLPADAMPGQH Trigger: ATGCTGACCCGGCATGGCGTCCGCAGGGAGGAGGCAGGTGCCTACCAGTGCGAGGTGTGGAACCCCGTCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS CCA 72 bp | TGCGCCGGGCCAGCGATCCAGTTCCCTGACGGCAGCTaGCTGAGCAGTCGGTTGGGTTCCGAGGCAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: CAGPAIQFPDGS*LSSRLGSEAGP Trigger: TGGACCTGCCTCGGAACCCAACCGACTGCTCAGCCAGCTGCCGTCAGGGAACTGGATCGCTGGCCCGGCGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS TCA 72 bp | TGCCCAAGCGGACGGCAACTGGCAGAGCGTCACCATTaGAGAACCAGCGGACCTCAGCGGGGCTGGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CPSGRQLAERHH*RTSGPQRGWGC Trigger: GCAGCCCCAGCCCCGCTGAGGTCCGCTGGTTCTTCAATGGTGACGCTCTGCCAGTTGCCGTCCGCTTGGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS TCA 72 bp | CCGGGCCAGCGATCCAGTTCCCTGACGGCAGCTGGCTaGGCAGTCGGTTGGGTTCCGAGGCAGGTCCACGAT | + |
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Preference number: 6 (lower is better) Translates to: PGQRSSSLTAAG*AVGWVPRQVHD Trigger: ATCGTGGACCTGCCTCGGAACCCAACCGACTGCTCAGCCAGCTGCCGTCAGGGAACTGGATCGCTGGCCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS GCA 72 bp | GCTGCAAGGGGCGTTTCTCTCCAGGTCTCAGCGGCCTaGGCTGCAGCTGAAGAGGCGGCGGTGGCTACTCCA | + |
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Preference number: 6 (lower is better) Translates to: AARGVSLQVSAA*AAAEEAAVATP Trigger: TGGAGTAGCCACCGCCGCCTCTTCAGCTGCAGCGCAGGCCGCTGAGACCTGGAGAGAAACGCCCCTTGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208198.2 |
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| CDS CCA 72 bp | AGGCTGCCATCAGGACGGACAGCTTCCCGCCCTGTGTaGGCTGGTCCGGGGGTCTCATCACCAGTGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: RLPSGRTASRPV*AGPGVSSPVLT Trigger: TGTCAGCACTGGTGATGAGACCCCCGGACCAGCCCACACAGGGCGGGAAGCTGTCCGTCCTGATGGCAGCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS CAA 72 bp | ATGCCCAAGCGGACGGCAACTGGCAGAGCGTCACCATaGAAGAACCAGCGGACCTCAGCGGGGCTGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: MPKRTATGRASP*KNQRTSAGLGL Trigger: CAGCCCCAGCCCCGCTGAGGTCCGCTGGTTCTTCAATGGTGACGCTCTGCCAGTTGCCGTCCGCTTGGGCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS CCA 72 bp | CCTGCCATCGGGGGACATGCCCAAGCGGACGGCAACTaGCAGAGCGTCACCATTGAAGAACCAGCGGACCTC | + |
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Preference number: 6 (lower is better) Translates to: PAIGGHAQADGN*QSVTIEEPADL Trigger: GAGGTCCGCTGGTTCTTCAATGGTGACGCTCTGCCAGTTGCCGTCCGCTTGGGCATGTCCCCCGATGGCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS TCA 72 bp | TATCCCTACGCTCCACCAGCGCAGTGTCGTTGGCCATaGCCGTGGGAGGGGCCAGGATCTCATAGACCTGCA | + |
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Preference number: 6 (lower is better) Translates to: YPYAPPAQCRWP*PWEGPGSHRPA Trigger: TGCAGGTCTATGAGATCCTGGCCCCTCCCACGGTCATGGCCAACGACACTGCGCTGGTGGAGCGTAGGGATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS GCA 72 bp | CTGTGTGCCCAGGTAAGGCACCATGGATATCAAGGCTaGCATCAGGACGGACAGCTTCCCGCCCTGTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: LCAQVRHHGYQG*HQDGQLPALCG Trigger: CCCACACAGGGCGGGAAGCTGTCCGTCCTGATGGCAGCCTTGATATCCATGGTGCCTTACCTGGGCACACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS TCA 72 bp | CAAGCAGTTCCCCTGAAAGCCCATGGACTACCAGCGTaGCATTGTCCCCCTCTGCAGGTTGTGCAGGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: QAVPLKAHGLPA*HCPPLQVVQAR Trigger: CCGAGCCTGCACAACCTGCAGAGGGGGACAATGTCACGCTGGTAGTCCATGGGCTTTCAGGGGAACTGCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS GCA 72 bp | AAGCCCATGGACTACCAGCGTGACATTGTCCCCCTCTaGAGGTTGTGCAGGCTCGGGGGTGATGGAGATCTC | + |
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Preference number: 6 (lower is better) Translates to: KPMDYQRDIVPL*RLCRLGGDGDL Trigger: GAGATCTCCATCACCCCCGAGCCTGCACAACCTGCAGAGGGGGACAATGTCACGCTGGTAGTCCATGGGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS CCA 72 bp | TACTCGTTCAGGGCCGAAGTATACCGTCAAGTTCAGTaGCTCGCTGCGGCTGACGCTGACGGGGTTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: YSFRAEVYRQVQ*LAAADADGVPH Trigger: GTGTGGAACCCCGTCAGCGTCAGCCGCAGCGAGCCACTGAACTTGACGGTATACTTCGGCCCTGAACGAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS CCA 72 bp | GCCCTGGACAGTCAGGGTCACGTCCTGGCCCTCCGTTaGCTTAGTCGGTACAGGAACGATCATCATGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: ALDSQGHVLALR*LSRYRNDHHGY Trigger: GTAGCCATGATGATCGTTCCTGTACCGACTAAGCCAACGGAGGGCCAGGACGTGACCCTGACTGTCCAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014830.8 ENSMUST00000208198.2 |
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| CDS CAA 72 bp | GGAACGATCATCATGGCTACAGCTGCCGCGGACAGCTaGACTACCACTGAGGCAGAGCCAGACAGCAGCGTC | + |
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Preference number: 6 (lower is better) Translates to: GTIIMATAAADS*TTTEAEPDSSV Trigger: GACGCTGCTGTCTGGCTCTGCCTCAGTGGTAGTCAAGCTGTCCGCGGCAGCTGTAGCCATGATGATCGTTCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014830.8 ENSMUST00000208198.2 |
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| CDS CAA 90 bp | GGCTCAGGGCAAGACCGCGCCACACACCACAGGGTGAGGGACATGTaGAAGTCCACTTTAATAGTGCAGCCCGTGCGGGTGGTAGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: GSGQDRATHHRVRDM*KSTLIVQPVRVVES Trigger: AGACTCTACCACCCGCACGGGCTGCACTATTAAAGTGGACTTCAACATGTCCCTCACCCTGTGGTGTGTGGCGCGGTCTTGCCCTGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS CAA 90 bp | GCGGACAGCTTGACTACCACTGAGGCAGAGCCAGACAGCAGCGTCTaGGAGTTCTTAGCGATGCACGTGTACGTGCCCTCATGGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ADSLTTTEAEPDSSV*EFLAMHVYVPSWAA Trigger: TGCAGCCCATGAGGGCACGTACACGTGCATCGCTAAGAACTCCAAGACGCTGCTGTCTGGCTCTGCCTCAGTGGTAGTCAAGCTGTCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014830.8 ENSMUST00000208198.2 |
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| CDS CAA 90 bp | GTCGGTACAGGAACGATCATCATGGCTACAGCTGCCGCGGACAGCTaGACTACCACTGAGGCAGAGCCAGACAGCAGCGTCTTGGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: VGTGTIIMATAAADS*TTTEAEPDSSVLEF Trigger: GAACTCCAAGACGCTGCTGTCTGGCTCTGCCTCAGTGGTAGTCAAGCTGTCCGCGGCAGCTGTAGCCATGATGATCGTTCCTGTACCGAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014830.8 ENSMUST00000208198.2 |
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| CDS CAA 72 bp | CAAGACCGCGCCACACACCACAGGGTGAGGGACATGTaGAAGTCCACTTTAATAGTGCAGCCCGTGCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: QDRATHHRVRDM*KSTLIVQPVRV Trigger: CACCCGCACGGGCTGCACTATTAAAGTGGACTTCAACATGTCCCTCACCCTGTGGTGTGTGGCGCGGTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS TCA 72 bp | AGGCCCTGCGTACCAATTGTAGGCAAGCAGTTCCCCTaGAAGCCCATGGACTACCAGCGTGACATTGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: RPCVPIVGKQFP*KPMDYQRDIVP Trigger: GGGGACAATGTCACGCTGGTAGTCCATGGGCTTTCAGGGGAACTGCTTGCCTACAATTGGTACGCAGGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS TCA 72 bp | TCAGGTGATCCTGGCCATTCTTCAAGGCCTTTCCATTaGAGGCCCACACGTACTCTGGCTCAGGGCAAGACC | + |
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Preference number: 6 (lower is better) Translates to: SGDPGHSSRPFH*RPTRTLAQGKT Trigger: GGTCTTGCCCTGAGCCAGAGTACGTGTGGGCCTTCAATGGAAAGGCCTTGAAGAATGGCCAGGATCACCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS CAA 72 bp | TTGACTACCACTGAGGCAGAGCCAGACAGCAGCGTCTaGGAGTTCTTAGCGATGCACGTGTACGTGCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LTTTEAEPDSSV*EFLAMHVYVPS Trigger: TGAGGGCACGTACACGTGCATCGCTAAGAACTCCAAGACGCTGCTGTCTGGCTCTGCCTCAGTGGTAGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014830.8 ENSMUST00000208198.2 |
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| CDS TCA 72 bp | ACGTGTACGTGCCCTCATGGGCTGCAGTCATACTGCTaGTGTTCAGGTGATCCTGGCCATTCTTCAAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: TCTCPHGLQSYC*CSGDPGHSSRP Trigger: AGGCCTTGAAGAATGGCCAGGATCACCTGAACATCAGCAGTATGACTGCAGCCCATGAGGGCACGTACACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014830.8 ENSMUST00000208198.2 |
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| CDS TCA 72 bp | ACTTTAATAGTGCAGCCCGTGCGGGTGGTAGAGTCTTaGAGGATAGCTACTCGTTCAGGGCCGAAGTATACC | + |
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Preference number: 6 (lower is better) Translates to: TLIVQPVRVVES*RIATRSGPKYT Trigger: GGTATACTTCGGCCCTGAACGAGTAGCTATCCTTCAAGACTCTACCACCCGCACGGGCTGCACTATTAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS TCA 72 bp | CCCTCATGGGCTGCAGTCATACTGCTGATGTTCAGGTaGTCCTGGCCATTCTTCAAGGCCTTTCCATTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PSWAAVILLMFR*SWPFFKAFPLK Trigger: CTTCAATGGAAAGGCCTTGAAGAATGGCCAGGATCACCTGAACATCAGCAGTATGACTGCAGCCCATGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014830.8 ENSMUST00000208198.2 |
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| CDS CAA 72 bp | CACTTTAATAGTGCAGCCCGTGCGGGTGGTAGAGTCTaGAAGGATAGCTACTCGTTCAGGGCCGAAGTATAC | + |
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Preference number: 6 (lower is better) Translates to: HFNSAARAGGRV*KDSYSFRAEVY Trigger: GTATACTTCGGCCCTGAACGAGTAGCTATCCTTCAAGACTCTACCACCCGCACGGGCTGCACTATTAAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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| CDS CAA 90 bp | GTTGAAGTCCACTTTAATAGTGCAGCCCGTGCGGGTGGTAGAGTCTaGAAGGATAGCTACTCGTTCAGGGCCGAAGTATACCGTCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: VEVHFNSAARAGGRV*KDSYSFRAEVYRQV Trigger: AACTTGACGGTATACTTCGGCCCTGAACGAGTAGCTATCCTTCAAGACTCTACCACCCGCACGGGCTGCACTATTAAAGTGGACTTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014830.8 |
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