Pregenerated sensors for CEACAM15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078795Ensembl transcript IDs: ENSMUST00000108498.3
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATCTGCGGCTTTTGGTGAGCGTAAGGCATCCGAGCAGTTCCCTCTaGATCCTGAGGGCGGGTCCACTTGTGATTCAGAGCCTGGGCCCT | + |
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Preference number: 1 (lower is better) Translates to: HLRLLVSVRHPSSSL*ILRAGPLVIQSLGP Trigger: AGGGCCCAGGCTCTGAATCACAAGTGGACCCGCCCTCAGGATCCAGAGGGAACTGCTCGGATGCCTTACGCTCACCAAAAGCCGCAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| 3UTR GCA 90 bp | TGGGGATTGCAGGTGTATGTCACCATGCTGACTGTCTCTCTTGTCTaGACTGATAGTTTTCTCCTTACAACTTTCATAAACTGTGCACAC | + |
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Preference number: 1 (lower is better) Translates to: WGLQVYVTMLTVSLV*TDSFLLTTFINCAH Trigger: GTGTGCACAGTTTATGAAAGTTGTAAGGAGAAAACTATCAGTGCAGACAAGAGAGACAGTCAGCATGGTGACATACACCTGCAATCCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| 3UTR CCA 72 bp | AGCCCAGGGCTTAGGCACCAGGAAGGATTTGAGCTGTaGGAAGATGTGACTAGCTCTAGGCGAGCACAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SPGLRHQEGFEL*EDVTSSRRAQQ Trigger: CTGCTGTGCTCGCCTAGAGCTAGTCACATCTTCCCACAGCTCAAATCCTTCCTGGTGCCTAAGCCCTGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| 3UTR-3UTR CAA 90 bp | GGGCTTAGGCACCAGGAAGGATTTGAGCTGTGGGAAGATGTGACTAGCTCTAGGTGTTTTATTTGGGGATaGCAGGTGTATGTCACCATG | + |
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Preference number: 3 (lower is better) Translates to: GLRHQEGFELWEDVTSSRCFIWG*QVYVTM Trigger: CATGGTGACATACACCTGCAATCCCCAAATAAAACA...CCTAGAGCTAGTCACATCTTCCCACAGCTCAAATCCTTCCTGGTGCCTAAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| 3UTR GCA 72 bp | CAGGTGTATGTCACCATGCTGACTGTCTCTCTTGTCTaGACTGATAGTTTTCTCCTTACAACTTTCATAAAC | + |
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Preference number: 3 (lower is better) Translates to: QVYVTMLTVSLV*TDSFLLTTFIN Trigger: GTTTATGAAAGTTGTAAGGAGAAAACTATCAGTGCAGACAAGAGAGACAGTCAGCATGGTGACATACACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| 3UTR GCA 72 bp | ATACATCTACAGCAAAACATATCCAGTCTGATACCCTaGCATTTTTCCAACTTCAAGCAGATAGATAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: IHLQQNISSLIP*HFSNFKQIDRV Trigger: GACCCTATCTATCTGCTTGAAGTTGGAAAAATGGCAGGGTATCAGACTGGATATGTTTTGCTGTAGATGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR TCA 90 bp | CCTCTGGATCCTGAGGGCGGGTCCACTTGTGATTCAGAGCCTGGGCCCTCCTTTTTAAAAGTGAGGCTGTaGGCAGGAGCCCTTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: PLDPEGGSTCDSEPGPSFLKVRL*AGALCR Trigger: TCTGCAAAGGGCTCCTGCTCACAGCCTCACTTTTAA...AAAGGAGGGCCCAGGCTCTGAATCACAAGTGGACCCGCCCTCAGGATCCAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR GCA 90 bp | TCCCTCTGGATCCTGAGGGCGGGTCCACTTGTGATTCAGAGCCTGGGCCCTCCTATAGATCCCAACATCTaGCCTCCAGACAGGAGATAT | + |
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Preference number: 4 (lower is better) Translates to: SLWILRAGPLVIQSLGPPIDPNI*PPDRRY Trigger: ATATCTCCTGTCTGGAGGGCAGATGTTGGGATCTAT...AGGAGGGCCCAGGCTCTGAATCACAAGTGGACCCGCCCTCAGGATCCAGAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR TCA 90 bp | CCTCTGGATCCTGAGGGCGGGTCCACTTGTGATTCAGAGCCTGGGCCCTCCTTTACTTTCTTTCCAAGTTaGAGCGAATCGCTGGACTTT | + |
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Preference number: 4 (lower is better) Translates to: PLDPEGGSTCDSEPGPSFTFFPS*SESLDF Trigger: AAAGTCCAGCGATTCGCTTCAACTTGGAAAGAAAGT...AAAGGAGGGCCCAGGCTCTGAATCACAAGTGGACCCGCCCTCAGGATCCAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR GCA 90 bp | CCTCTGGATCCTGAGGGCGGGTCCACTTGTGATTCAGAGCCTGGGCCCTCCTTTTTAGCCATAAGCCAATaGCATGAGCAGTGGATAAGA | + |
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Preference number: 4 (lower is better) Translates to: PLDPEGGSTCDSEPGPSFLAISQ*HEQWIR Trigger: TCTTATCCACTGCTCATGGCATTGGCTTATGGCTAA...AAAGGAGGGCCCAGGCTCTGAATCACAAGTGGACCCGCCCTCAGGATCCAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR CCA 90 bp | GGGCTTAGGCACCAGGAAGGATTTGAGCTGTGGGAAGATGTGACTAGCTCTAGGTCAGCAGTGCTGCAGTaGACCAGTTCCAGCAGATTA | + |
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Preference number: 4 (lower is better) Translates to: GLRHQEGFELWEDVTSSRSAVLQ*TSSSRL Trigger: TAATCTGCTGGAACTGGTCCACTGCAGCACTGCTGA...CCTAGAGCTAGTCACATCTTCCCACAGCTCAAATCCTTCCTGGTGCCTAAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR TCA 90 bp | TGGGGATTGCAGGTGTATGTCACCATGCTGACTGTCTCTCTTGTCTGCACTGATAGACAGGAGATATGGTaGGCTCTCGCTTTTCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: WGLQVYVTMLTVSLVCTDRQEIW*ALAFQV Trigger: CACCTGAAAAGCGAGAGCTCACCATATCTCCTGTCT...ATCAGTGCAGACAAGAGAGACAGTCAGCATGGTGACATACACCTGCAATCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR TCA 90 bp | GGGCTTAGGCACCAGGAAGGATTTGAGCTGTGGGAAGATGTGACTAGCTCTAGGCATAAGCCAATGCCATaGGCAGTGGATAAGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: GLRHQEGFELWEDVTSSRHKPMP*AVDKTS Trigger: AGAAGTCTTATCCACTGCTCATGGCATTGGCTTATG...CCTAGAGCTAGTCACATCTTCCCACAGCTCAAATCCTTCCTGGTGCCTAAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR TCA 90 bp | CTTGTGATTCAGAGCCTGGGCCCTCCTTTGCAATTCTGTTCCTATATTGAGGTCTTTCAGGTGACAGCGTaGTCCTCTCAGTGGCATTCA | + |
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Preference number: 4 (lower is better) Translates to: LVIQSLGPPLQFCSYIEVFQVTA*SSQWHS Trigger: TGAATGCCACTGAGAGGATCACGCTGTCACCTGAAA...GACCTCAATATAGGAACAGAATTGCAAAGGAGGGCCCAGGCTCTGAATCACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR GCA 90 bp | TATTTGGGGATTGCAGGTGTATGTCACCATGCTGACTGTCTCTCTTGTCTGCACTTTAGAGGTCAGCAGTaGTGCAGTGGACCAGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: YLGIAGVCHHADCLSCLHFRGQQ*CSGPVP Trigger: TGGAACTGGTCCACTGCAGCACTGCTGACCTCTAAA...GTGCAGACAAGAGAGACAGTCAGCATGGTGACATACACCTGCAATCCCCAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR CCA 90 bp | CCGTGTTTTATTTGGGGATTGCAGGTGTATGTCACCATGCTGACTGTCTCTCTTAGGAGGTTCTCCTCCTaGTCAGGAACAGAGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PCFIWGLQVYVTMLTVSLRRFSS*SGTERR Trigger: TCTTCTCTCTGTTCCTGACCAGGAGGAGAACCTCCT...AAGAGAGACAGTCAGCATGGTGACATACACCTGCAATCCCCAAATAAAACACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR CCA 90 bp | TGGGGATTGCAGGTGTATGTCACCATGCTGACTGTCTCTCTTGTCTGCACTGATCAATGCCATGAGCAGTaGATAAGACTTCTTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: WGLQVYVTMLTVSLVCTDQCHEQ*IRLLGT Trigger: AGTTCCAAGAAGTCTTATCCACTGCTCATGGCATTG...ATCAGTGCAGACAAGAGAGACAGTCAGCATGGTGACATACACCTGCAATCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR CCA 90 bp | CTTGTGATTCAGAGCCTGGGCCCTCCTTTGCAATTCTGTTCCTATATTGAGGTCACGATCTTGTATACTTaGAGATGGACATGTGTTACT | + |
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Preference number: 4 (lower is better) Translates to: LVIQSLGPPLQFCSYIEVTILYT*RWTCVT Trigger: AGTAACACATGTCCATCTCCAAGTATACAAGATCGT...GACCTCAATATAGGAACAGAATTGCAAAGGAGGGCCCAGGCTCTGAATCACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| 3UTR CAA 72 bp | AGAGCCTGGGCCCTCCTTTGCAATTCTGTTCCTATATaGAGGTCTTGTTTTAAAGTCACTGTCATACTGTGT | + |
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Preference number: 4 (lower is better) Translates to: RAWALLCNSVPI*RSCFKVTVILC Trigger: ACACAGTATGACAGTGACTTTAAAACAAGACCTCAATATAGGAACAGAATTGCAAAGGAGGGCCCAGGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR TCA 90 bp | ATGAAAACTGTCCCAAACCATACATCTACAGCAAAACATATCCAGTCTGATACCTTTCTTCCCTGCCGCTaGCTTTCTTTCCAAGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: MKTVPNHTSTAKHIQSDTFLPCR*LSFQVE Trigger: TTCAACTTGGAAAGAAAGTCAGCGGCAGGGAAGAAA...GGTATCAGACTGGATATGTTTTGCTGTAGATGTATGGTTTGGGACAGTTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR CCA 90 bp | ATGAAAACTGTCCCAAACCATACATCTACAGCAAAACATATCCAGTCTGATACCTGTGTTACTTCCTGTTaGCCGTGTGCTTTAAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: MKTVPNHTSTAKHIQSDTCVTSC*PCALKV Trigger: AACCTTTAAAGCACACGGCCAACAGGAAGTAACACA...GGTATCAGACTGGATATGTTTTGCTGTAGATGTATGGTTTGGGACAGTTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR CCA 90 bp | ATGAAAACTGTCCCAAACCATACATCTACAGCAAAACATATCCAGTCTGATACCGTTGAAGCGAATCGCTaGACTTTTTATAATGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: MKTVPNHTSTAKHIQSDTVEANR*TFYNVQ Trigger: TTGCACATTATAAAAAGTCCAGCGATTCGCTTCAAC...GGTATCAGACTGGATATGTTTTGCTGTAGATGTATGGTTTGGGACAGTTTTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR CCA 90 bp | ATGAAAACTGTCCCAAACCATACATCTACAGCAAAACATATCCAGTCTGATACCTTGTATACTTGGAGATaGACATGTGTTACTTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: MKTVPNHTSTAKHIQSDTLYTWR*TCVTSC Trigger: ACAGGAAGTAACACATGTCCATCTCCAAGTATACAA...GGTATCAGACTGGATATGTTTTGCTGTAGATGTATGGTTTGGGACAGTTTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR CAA 90 bp | TCCCTCTGGATCCTGAGGGCGGGTCCACTTGTGATTCAGAGCCTGGGCCCTCCTCAGAGAGAAGAACCTTaGCCCCTTCAGCAGCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: SLWILRAGPLVIQSLGPPQREEP*PLQQLR Trigger: TCTCAGCTGCTGAAGGGGCAAAGGTTCTTCTCTCTG...AGGAGGGCCCAGGCTCTGAATCACAAGTGGACCCGCCCTCAGGATCCAGAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS TCA 90 bp | CCAGTTGATGTCCACTCCGGTGTCAGGCGACACGCAGGTGAGAATTaGGGCACTCTTCCTTTTCAGCCTAGTGTGGTTGAGCTGGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: PVDVHSGVRRHAGEN*GTLPFQPSVVELEV Trigger: TACCTCCAGCTCAACCACACTAGGCTGAAAAGGAAGAGTGCCTCAATTCTCACCTGCGTGTCGCCTGACACCGGAGTGGACATCAACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR CAA 90 bp | TCCCTCTGGATCCTGAGGGCGGGTCCACTTGTGATTCAGAGCCTGGGCCCTCCTCACGATCTTGTATACTaGGAGATGGACATGTGTTAC | + |
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Preference number: 5 (lower is better) Translates to: SLWILRAGPLVIQSLGPPHDLVY*EMDMCY Trigger: GTAACACATGTCCATCTCCAAGTATACAAGATCGTG...AGGAGGGCCCAGGCTCTGAATCACAAGTGGACCCGCCCTCAGGATCCAGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS TCA 90 bp | CTCCTGGTCAGGAACAGAGAGAAGAACCTTTGCCCCTTCAGCAGCTaGGAAGCGCATTTCTTTAGAGGTCAGCAGTGCTGCAGTGGACCA | + |
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Preference number: 5 (lower is better) Translates to: LLVRNREKNLCPFSS*EAHFFRGQQCCSGP Trigger: TGGTCCACTGCAGCACTGCTGACCTCTAAAGAAATGCGCTTCTCAGCTGCTGAAGGGGCAAAGGTTCTTCTCTCTGTTCCTGACCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR CAA 90 bp | CCGTGTTTTATTTGGGGATTGCAGGTGTATGTCACCATGCTGACTGTCTCTCTTGTGAGCAGGAGCCCTTaGCAGAGAAACAAAGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: PCFIWGLQVYVTMLTVSLVSRSP*QRNKEG Trigger: CCCTTCTTTGTTTCTCTGCAAAGGGCTCCTGCTCAC...AAGAGAGACAGTCAGCATGGTGACATACACCTGCAATCCCCAAATAAAACACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS-3UTR CAA 90 bp | CCGTGTTTTATTTGGGGATTGCAGGTGTATGTCACCATGCTGACTGTCTCTCTTTTTACATCCTTCCCTTaGTACCAGGAAAAGGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: PCFIWGLQVYVTMLTVSLFTSFP*YQEKER Trigger: CCTCTCCTTTTCCTGGTACAAAGGGAAGGATGTAAA...AAGAGAGACAGTCAGCATGGTGACATACACCTGCAATCCCCAAATAAAACACGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS TCA 72 bp | GTCCACTCCGGTGTCAGGCGACACGCAGGTGAGAATTaGGGCACTCTTCCTTTTCAGCCTAGTGTGGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: VHSGVRRHAGEN*GTLPFQPSVVE Trigger: CTCAACCACACTAGGCTGAAAAGGAAGAGTGCCTCAATTCTCACCTGCGTGTCGCCTGACACCGGAGTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS TCA 72 bp | CCAGACAGGAGATATGGTGAGCTCTCGCTTTTCAGGTaGCAGCGTGATCCTCTCAGTGGCATTCAGGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: PDRRYGELSLFR*QRDPLSGIQGL Trigger: AAGCCCCTGAATGCCACTGAGAGGATCACGCTGTCACCTGAAAAGCGAGAGCTCACCATATCTCCTGTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS CCA 72 bp | CCTTTGTACCAGGAAAAGGAGAGGAGGTTCTCCTCCTaGTCAGGAACAGAGAGAAGAACCTTTGCCCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PLYQEKERRFSS*SGTERRTFAPS Trigger: TGAAGGGGCAAAGGTTCTTCTCTCTGTTCCTGACCAGGAGGAGAACCTCCTCTCCTTTTCCTGGTACAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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| CDS CAA 72 bp | ATAGATTTCTTCCCTGCCGCTGACTTTCTTTCCAAGTaGAAGCGAATCGCTGGACTTTTTATAATGTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: IDFFPAADFLSK*KRIAGLFIMCN Trigger: ATTGCACATTATAAAAAGTCCAGCGATTCGCTTCAACTTGGAAAGAAAGTCAGCGGCAGGGAAGAAATCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108498.3 |
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