Pregenerated sensors for CEACAM14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023185Ensembl transcript IDs: ENSMUST00000023953.5
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTTCCAGCCGGGTCAAGGCTTCTGATGTATTTCAATTTGCCCCATaGTGTGTGTCTTTTACTAAAGGCTCAAACCCAAGTGAGAGTACA | + |
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Preference number: 1 (lower is better) Translates to: GSSRVKASDVFQFAP*CVSFTKGSNPSEST Trigger: TGTACTCTCACTTGGGTTTGAGCCTTTAGTAAAAGACACACATCATGGGGCAAATTGAAATACATCAGAAGCCTTGACCCGGCTGGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| 3UTR-3UTR CCA 90 bp | CTGATGTATTTCAATTTGCCCCATGATGTGTGTCTTTTACTAAAGGCTCAAACCAGTACACATTCCAGATaGGAGGGAGGTAGAATAGAA | + |
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Preference number: 2 (lower is better) Translates to: LMYFNLPHDVCLLLKAQTSTHSR*EGGRIE Trigger: TTCTATTCTACCTCCCTCCCATCTGGAATGTGTACT...GGTTTGAGCCTTTAGTAAAAGACACACATCATGGGGCAAATTGAAATACATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| 3UTR TCA 72 bp | CGGGTCAAGGCTTCTGATGTATTTCAATTTGCCCCATaGTGTGTGTCTTTTACTAAAGGCTCAAACCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: RVKASDVFQFAP*CVSFTKGSNPS Trigger: ACTTGGGTTTGAGCCTTTAGTAAAAGACACACATCATGGGGCAAATTGAAATACATCAGAAGCCTTGACCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR GCA 90 bp | AACCCAAGTGAGAGTACACATTCCAGATGGGAGGGAGGTAGAATAGAAACCTCAGTGAGCAGGAGCCCCTaGCAGGAGGTACAGACTTTA | + |
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Preference number: 4 (lower is better) Translates to: NPSESTHSRWEGGRIETSVSRSP*QEVQTL Trigger: TAAAGTCTGTACCTCCTGGCAGGGGCTCCTGCTCAC...TGAGGTTTCTATTCTACCTCCCTCCCATCTGGAATGTGTACTCTCACTTGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR TCA 90 bp | TGTGTGTCTTTTACTAAAGGCTCAAACCCAAGTGAGAGTACACATTCCAGATGGTTAAAAGGGAGACTGTaGGCAGGAGCCCCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: CVSFTKGSNPSESTHSRWLKGRL*AGAPAR Trigger: CCTGGCAGGGGCTCCTGCTCACAGTCTCCCTTTTAA...CCATCTGGAATGTGTACTCTCACTTGGGTTTGAGCCTTTAGTAAAAGACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR TCA 90 bp | CTCACTGTCTTAAGTTTACAGAGAAGAATAAACCCCACCATCACCCAGGAGTCACTCTCTACCACTATGTaGAAGTCCGATCACAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LTVLSLQRRINPTITQESLSTTM*KSDHSS Trigger: GCTACTGTGATCGGACTTTCACATAGTGGTAGAGAG...TGACTCCTGGGTGATGGTGGGGTTTATTCTTCTCTGTAAACTTAAGACAGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR TCA 90 bp | CTCACTGTCTTAAGTTTACAGAGAAGAATAAACCCCACCATCACCCAGGAGTCAGCAGAGATCCATTTTTaGACACTGTCTCTCTACCAC | + |
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Preference number: 4 (lower is better) Translates to: LTVLSLQRRINPTITQESAEIHF*TLSLYH Trigger: GTGGTAGAGAGACAGTGTTCAAAAATGGATCTCTGC...TGACTCCTGGGTGATGGTGGGGTTTATTCTTCTCTGTAAACTTAAGACAGTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| 3UTR CAA 72 bp | GTTCCAGCCGGGTCAAGGCTTCTGATGTATTTCAATTaGCCCCATGATGTGTGTCTTTTACTAAAGGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: VPAGSRLLMYFN*PHDVCLLLKAQ Trigger: TTGAGCCTTTAGTAAAAGACACACATCATGGGGCAAATTGAAATACATCAGAAGCCTTGACCCGGCTGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR TCA 90 bp | TTGCCCCATGATGTGTGTCTTTTACTAAAGGCTCAAACCCAAGTGAGAGTACACCTGTGTCATTCTTTGTaGCATTCAAGAGAAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LPHDVCLLLKAQTQVRVHLCHSL*HSREAR Trigger: CCTTGCTTCTCTTGAATGTCACAAAGAATGACACAG...GTGTACTCTCACTTGGGTTTGAGCCTTTAGTAAAAGACACACATCATGGGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR CCA 90 bp | TTTACTAAAGGCTCAAACCCAAGTGAGAGTACACATTCCAGATGGGAGGGAGGTCTTGCTATCTTCAAATaGTCAAGTGGAAGTACTCCT | + |
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Preference number: 4 (lower is better) Translates to: FTKGSNPSESTHSRWEGGLAIFK*SSGSTP Trigger: AGGAGTACTTCCACTTGACCATTTGAAGATAGCAAG...ACCTCCCTCCCATCTGGAATGTGTACTCTCACTTGGGTTTGAGCCTTTAGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR TCA 90 bp | GTGTGTCTTTTACTAAAGGCTCAAACCCAAGTGAGAGTACACATTCCAGATGGGAGCTTCTTTGGCATCTaGAAGACCCACAAAATAACA | + |
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Preference number: 4 (lower is better) Translates to: VCLLLKAQTQVRVHIPDGSFFGI*KTHKIT Trigger: TGTTATTTTGTGGGTCTTTCAGATGCCAAAGAAGCT...CCCATCTGGAATGTGTACTCTCACTTGGGTTTGAGCCTTTAGTAAAAGACACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR GCA 90 bp | GTCTTAAGTTTACAGAGAAGAATAAACCCCACCATCACCCAGGAGTCACAAAGATTCTTCGGCAGGTTATaGACAAACAGAAGAACGTTT | + |
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Preference number: 4 (lower is better) Translates to: VLSLQRRINPTITQESQRFFGRL*TNRRTF Trigger: AAACGTTCTTCTGTTTGTGCATAACCTGCCGAAGAA...TCTTTGTGACTCCTGGGTGATGGTGGGGTTTATTCTTCTCTGTAAACTTAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR CCA 90 bp | TCAAGGCTTCTGATGTATTTCAATTTGCCCCATGATGTGTGTCTTTTACTAAAGGGCTTGAAGCTTCTTTaGCATCTGAAAGACCCACAA | + |
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Preference number: 4 (lower is better) Translates to: SRLLMYFNLPHDVCLLLKGLKLL*HLKDPQ Trigger: TTGTGGGTCTTTCAGATGCCAAAGAAGCTTCAAGCC...CTTTAGTAAAAGACACACATCATGGGGCAAATTGAAATACATCAGAAGCCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR CCA 90 bp | TCAAGGCTTCTGATGTATTTCAATTTGCCCCATGATGTGTGTCTTTTACTAAAGATGCATGCCCCAGCATaGTTGAATTGGTTAGGAATG | + |
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Preference number: 4 (lower is better) Translates to: SRLLMYFNLPHDVCLLLKMHAPA*LNWLGM Trigger: CATTCCTAACCAATTCAACCATGCTGGGGCATGCAT...CTTTAGTAAAAGACACACATCATGGGGCAAATTGAAATACATCAGAAGCCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR CCA 90 bp | TCAAGGCTTCTGATGTATTTCAATTTGCCCCATGATGTGTGTCTTTTACTAAAGCTTCAAATGGTCAAGTaGAAGTACTCCTTTGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SRLLMYFNLPHDVCLLLKLQMVK*KYSFVP Trigger: TGGCACAAAGGAGTACTTCCACTTGACCATTTGAAG...CTTTAGTAAAAGACACACATCATGGGGCAAATTGAAATACATCAGAAGCCTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR CCA 90 bp | TCAAGGCTTCTGATGTATTTCAATTTGCCCCATGATGTGTGTCTTTTACTAAAGCATTTACTGTTTACTTaGACTTCAATAATGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: SRLLMYFNLPHDVCLLLKHLLFT*TSIMAH Trigger: ATGGGCCATTATTGAAGTCCAAGTAAACAGTAAATG...CTTTAGTAAAAGACACACATCATGGGGCAAATTGAAATACATCAGAAGCCTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS GCA 90 bp | GGAATCAGCCAGCAGGTTAAAAGGGAGACTGTGAGCAGGAGCCCCTaGCAGGAGGTACAGACTTTACAGGAAAGTGCAACGCAGTCCATC | + |
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Preference number: 5 (lower is better) Translates to: GISQQVKRETVSRSP*QEVQTLQESATQSI Trigger: GATGGACTGCGTTGCACTTTCCTGTAAAGTCTGTACCTCCTGGCAGGGGCTCCTGCTCACAGTCTCCCTTTTAACCTGCTGGCTGATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR CAA 90 bp | GGCTCAAACCCAAGTGAGAGTACACATTCCAGATGGGAGGGAGGTAGAATAGAAGTGCCAAGCAAAGGCTaGAAGCTTCTTTGGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: GSNPSESTHSRWEGGRIEVPSKG*KLLWHL Trigger: CAGATGCCAAAGAAGCTTCAAGCCTTTGCTTGGCAC...TTCTATTCTACCTCCCTCCCATCTGGAATGTGTACTCTCACTTGGGTTTGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR CAA 90 bp | TTACTAAAGGCTCAAACCCAAGTGAGAGTACACATTCCAGATGGGAGGGAGGTAATGGGAGGCACTGATTaGATGGTGAGCTGGGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: LLKAQTQVRVHIPDGREVMGGTD*MVSWEV Trigger: TACTTCCCAGCTCACCATCAAATCAGTGCCTCCCAT...TACCTCCCTCCCATCTGGAATGTGTACTCTCACTTGGGTTTGAGCCTTTAGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS TCA 90 bp | CAACAGATATGGTTCGTAGGGTGTAAAGCCCTGTGTCATTCTTTGTaGCATTCAAGAGAAGCAAGGACCCATCGTTGCGTACTGTCAATC | + |
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Preference number: 5 (lower is better) Translates to: QQIWFVGCKALCHSL*HSREARTHRCVLSI Trigger: GATTGACAGTACGCAACGATGGGTCCTTGCTTCTCTTGAATGTCACAAAGAATGACACAGGGCTTTACACCCTACGAACCATATCTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR CAA 90 bp | CTCACTGTCTTAAGTTTACAGAGAAGAATAAACCCCACCATCACCCAGGAGTCAAGCAGAGATCCATTTTaGAACACTGTCTCTCTACCA | + |
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Preference number: 5 (lower is better) Translates to: LTVLSLQRRINPTITQESSRDPF*NTVSLP Trigger: TGGTAGAGAGACAGTGTTCAAAAATGGATCTCTGCT...TGACTCCTGGGTGATGGTGGGGTTTATTCTTCTCTGTAAACTTAAGACAGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR CAA 90 bp | GTCTTAAGTTTACAGAGAAGAATAAACCCCACCATCACCCAGGAGTCACAAAGACATGCCCCAGCATGGTaGAATTGGTTAGGAATGAAT | + |
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Preference number: 5 (lower is better) Translates to: VLSLQRRINPTITQESQRHAPAW*NWLGMN Trigger: ATTCATTCCTAACCAATTCAACCATGCTGGGGCATG...TCTTTGTGACTCCTGGGTGATGGTGGGGTTTATTCTTCTCTGTAAACTTAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS CCA 90 bp | CATCGTTGCGTACTGTCAATCTGTCATAATATGCATGCCCCAGCATaGTTGAATTGGTTAGGAATGAATGGCTTGCTATCTTCAAATGGT | + |
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Preference number: 5 (lower is better) Translates to: HRCVLSICHNMHAPA*LNWLGMNGLLSSNG Trigger: ACCATTTGAAGATAGCAAGCCATTCATTCCTAACCAATTCAACCATGCTGGGGCATGCATATTATGACAGATTGACAGTACGCAACGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR CAA 90 bp | CTTTTACTAAAGGCTCAAACCCAAGTGAGAGTACACATTCCAGATGGGAGGGAGTCATTTACTGTTTACTaGGACTTCAATAATGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: LLLKAQTQVRVHIPDGRESFTVY*DFNNGP Trigger: TGGGCCATTATTGAAGTCCAAGTAAACAGTAAATGA...CTCCCTCCCATCTGGAATGTGTACTCTCACTTGGGTTTGAGCCTTTAGTAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR CAA 90 bp | TCAAGGCTTCTGATGTATTTCAATTTGCCCCATGATGTGTGTCTTTTACTAAAGAGGCTTGAAGCTTCTTaGGCATCTGAAAGACCCACA | + |
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Preference number: 5 (lower is better) Translates to: SRLLMYFNLPHDVCLLLKRLEAS*ASERPT Trigger: TGTGGGTCTTTCAGATGCCAAAGAAGCTTCAAGCCT...CTTTAGTAAAAGACACACATCATGGGGCAAATTGAAATACATCAGAAGCCTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS CCA 90 bp | AAGTGGAAGTACTCCTTTGTGCCAAGCAAAGGCTTGAAGCTTCTTTaGCATCTGAAAGACCCACAAAATAACATTGATGTTTTCTTCAAC | + |
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Preference number: 5 (lower is better) Translates to: KWKYSFVPSKGLKLL*HLKDPQNNIDVFFN Trigger: GTTGAAGAAAACATCAATGTTATTTTGTGGGTCTTTCAGATGCCAAAGAAGCTTCAAGCCTTTGCTTGGCACAAAGGAGTACTTCCACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS-3UTR CAA 90 bp | CTTCTGATGTATTTCAATTTGCCCCATGATGTGTGTCTTTTACTAAAGGCTCAACAACGCAATTTTGAGTaGAGAAGGGGTGAGATGCTT | + |
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Preference number: 5 (lower is better) Translates to: LLMYFNLPHDVCLLLKAQQRNFE*RRGEML Trigger: AAGCATCTCACCCCTTCTCAACTCAAAATTGCGTTG...TTGAGCCTTTAGTAAAAGACACACATCATGGGGCAAATTGAAATACATCAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS CAA 72 bp | ACGTTTTCCCCTTCAACAGCAATGGGAGGCACTGATTaGATGGTGAGCTGGGAAGTAGTGGGAATCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: TFSPSTAMGGTD*MVSWEVVGISQ Trigger: CTGGCTGATTCCCACTACTTCCCAGCTCACCATCAAATCAGTGCCTCCCATTGCTGTTGAAGGGGAAAACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS CCA 72 bp | TCAACAGCAATGGGAGGCACTGATTTGATGGTGAGCTaGGAAGTAGTGGGAATCAGCCAGCAGGTTAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: STAMGGTDLMVS*EVVGISQQVKR Trigger: CCTTTTAACCTGCTGGCTGATTCCCACTACTTCCCAGCTCACCATCAAATCAGTGCCTCCCATTGCTGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS TCA 72 bp | AAGAACGTTTTCCCCTTCAACAGCAATGGGAGGCACTaGTTTGATGGTGAGCTGGGAAGTAGTGGGAATCAG | + |
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Preference number: 6 (lower is better) Translates to: KNVFPFNSNGRH*FDGELGSSGNQ Trigger: CTGATTCCCACTACTTCCCAGCTCACCATCAAATCAGTGCCTCCCATTGCTGTTGAAGGGGAAAACGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS CAA 90 bp | AACAGAAGAACGTTTTCCCCTTCAACAGCAATGGGAGGCACTGATTaGATGGTGAGCTGGGAAGTAGTGGGAATCAGCCAGCAGGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: NRRTFSPSTAMGGTD*MVSWEVVGISQQVK Trigger: TTTAACCTGCTGGCTGATTCCCACTACTTCCCAGCTCACCATCAAATCAGTGCCTCCCATTGCTGTTGAAGGGGAAAACGTTCTTCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS TCA 72 bp | TGGTTCGTAGGGTGTAAAGCCCTGTGTCATTCTTTGTaGCATTCAAGAGAAGCAAGGACCCATCGTTGCGTA | + |
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Preference number: 6 (lower is better) Translates to: WFVGCKALCHSL*HSREARTHRCV Trigger: TACGCAACGATGGGTCCTTGCTTCTCTTGAATGTCACAAAGAATGACACAGGGCTTTACACCCTACGAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS CCA 72 bp | GCATGCCCCAGCATGGTTGAATTGGTTAGGAATGAATaGCTTGCTATCTTCAAATGGTCAAGTGGAAGTACT | + |
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Preference number: 6 (lower is better) Translates to: ACPSMVELVRNE*LAIFKWSSGST Trigger: AGTACTTCCACTTGACCATTTGAAGATAGCAAGCCATTCATTCCTAACCAATTCAACCATGCTGGGGCATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS CAA 72 bp | GTCAAGTGGAAGTACTCCTTTGTGCCAAGCAAAGGCTaGAAGCTTCTTTGGCATCTGAAAGACCCACAAAAT | + |
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Preference number: 6 (lower is better) Translates to: VKWKYSFVPSKG*KLLWHLKDPQN Trigger: ATTTTGTGGGTCTTTCAGATGCCAAAGAAGCTTCAAGCCTTTGCTTGGCACAAAGGAGTACTTCCACTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS CAA 72 bp | GCCCCAGCATGGTTGAATTGGTTAGGAATGAATGGCTaGCTATCTTCAAATGGTCAAGTGGAAGTACTCCTT | + |
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Preference number: 6 (lower is better) Translates to: APAWLNWLGMNG*LSSNGQVEVLL Trigger: AAGGAGTACTTCCACTTGACCATTTGAAGATAGCAAGCCATTCATTCCTAACCAATTCAACCATGCTGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS CAA 90 bp | AATATGCATGCCCCAGCATGGTTGAATTGGTTAGGAATGAATGGCTaGCTATCTTCAAATGGTCAAGTGGAAGTACTCCTTTGTGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: NMHAPAWLNWLGMNG*LSSNGQVEVLLCAK Trigger: CTTGGCACAAAGGAGTACTTCCACTTGACCATTTGAAGATAGCAAGCCATTCATTCCTAACCAATTCAACCATGCTGGGGCATGCATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS CAA 72 bp | TTACTGGTGACACTCTTGATCAGCAGAGATCCATTTTaGAACACTGTCTCTCTACCACTATGTGAAAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: LLVTLLISRDPF*NTVSLPLCESP Trigger: CGGACTTTCACATAGTGGTAGAGAGACAGTGTTCAAAAATGGATCTCTGCTGATCAAGAGTGTCACCAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS CAA 90 bp | CGTTGCGTACTGTCAATCTGTCATAATATGCATGCCCCAGCATGGTaGAATTGGTTAGGAATGAATGGCTTGCTATCTTCAAATGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: RCVLSICHNMHAPAW*NWLGMNGLLSSNGQ Trigger: TTGACCATTTGAAGATAGCAAGCCATTCATTCCTAACCAATTCAACCATGCTGGGGCATGCATATTATGACAGATTGACAGTACGCAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS CCA 72 bp | GAATTGGTTAGGAATGAATGGCTTGCTATCTTCAAATaGTCAAGTGGAAGTACTCCTTTGTGCCAAGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: ELVRNEWLAIFK*SSGSTPLCQAK Trigger: CTTTGCTTGGCACAAAGGAGTACTTCCACTTGACCATTTGAAGATAGCAAGCCATTCATTCCTAACCAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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| CDS CCA 72 bp | TACTCCTTTGTGCCAAGCAAAGGCTTGAAGCTTCTTTaGCATCTGAAAGACCCACAAAATAACATTGATGTT | + |
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Preference number: 6 (lower is better) Translates to: YSFVPSKGLKLL*HLKDPQNNIDV Trigger: AACATCAATGTTATTTTGTGGGTCTTTCAGATGCCAAAGAAGCTTCAAGCCTTTGCTTGGCACAAAGGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023953.5 |
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