Pregenerated sensors for CEACAM13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057195Ensembl transcript IDs: ENSMUST00000081703.8, ENSMUST00000108488.7
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATTTATTCAGAGTAGAGAGTAAGGGTAGAAGTAATGCACATATTTaGCTTTCTTCTTTGATTCTTCAAGGGCCATGGTTTACATCTTCT | + |
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Preference number: 1 (lower is better) Translates to: YLFRVESKGRSNAHI*LSSLILQGPWFTSS Trigger: AGAAGATGTAAACCATGGCCCTTGAAGAATCAAAGAAGAAAGGCAAATATGTGCATTACTTCTACCCTTACTCTCTACTCTGAATAAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR GCA 90 bp | CATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGCAGCCCCTGCCAAGAGGTaGAGTCTTTACAGGAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: HCLRYTEKNKPHLHPGVAAPAKR*SLYRKV Trigger: CACTTTCCTGTAAAGACTGCACCTCTTGGCAGGGGC...TGCGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR TCA 90 bp | CTCATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGCAATTTCACAACACTTaGACGGTGCAGCTCCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: LIVLGIQRRINPTFTQESQFHNT*TVQLPS Trigger: ACTCGGGAGCTGCACCGTTCAAGTGTTGTGAAATTG...CGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR GCA 90 bp | CTCATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGGTGAACAGAAGCCCCTaGCAAGAGGTGCAGTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: LIVLGIQRRINPTFTQESVNRSP*QEVQSL Trigger: TAAAGACTGCACCTCTTGGCAGGGGCTTCTGTTCAC...CGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR TCA 90 bp | CTCATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGTTAAAAGAGAGACTGTaGACAGAAGCCCCTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LIVLGIQRRINPTFTQESLKERL*TEAPAK Trigger: CTTGGCAGGGGCTTCTGTTCACAGTCTCTCTTTTAA...CGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR TCA 90 bp | GATTCTTCAAGGGCCATGGTTTACATCTTCTTCCTTGATTGTCTGAAGCCTGACTTAAAAGAGAGACTGTaGACAGAAGCCCCTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: DSSRAMVYIFFLDCLKPDLKERL*TEAPAK Trigger: CTTGGCAGGGGCTTCTGTTCACAGTCTCTCTTTTAA...GTCAGGCTTCAGACAATCAAGGAAGAAGATGTAAACCATGGCCCTTGAAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR TCA 90 bp | ATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGCAAGCTTTAATGGTGAGATaGGAAGTAGTGGGATGCAGC | + |
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Preference number: 4 (lower is better) Translates to: IVLGIQRRINPTFTQESQALMVR*EVVGCS Trigger: GCTGCATCCCACTACTTCTCATCTCACCATTAAAGC...TTGCGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR TCA 90 bp | GATTCTTCAAGGGCCATGGTTTACATCTTCTTCCTTGATTGTCTGAAGCCTGACGCTTTAATGGTGAGATaGGAAGTAGTGGGATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSSRAMVYIFFLDCLKPDALMVR*EVVGCS Trigger: GCTGCATCCCACTACTTCTCATCTCACCATTAAAGC...GTCAGGCTTCAGACAATCAAGGAAGAAGATGTAAACCATGGCCCTTGAAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR GCA 90 bp | CTCATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGGCAAGGACCCATCATTaGGTACTTTCACTCTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LIVLGIQRRINPTFTQESARTHH*VLSLCH Trigger: ATGACAGAGTGAAAGTACGCAATGATGGGTCCTTGC...CGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR CCA 90 bp | CATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGCATTCTTCAACCCTAAGTaGCACCAACTGAATTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HCLRYTEKNKPHLHPGVAFFNPK*HQLNCE Trigger: CTCACAATTCAGTTGGTGCCACTTAGGGTTGAAGAA...TGCGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR GCA 90 bp | AATGCACATATTTGCCTTTCTTCTTTGATTCTTCAAGGGCCATGGTTTACATCTGCCCCTGCCAAGAGGTaGAGTCTTTACAGGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NAHICLSSLILQGPWFTSAPAKR*SLYRKV Trigger: CACTTTCCTGTAAAGACTGCACCTCTTGGCAGGGGC...AGATGTAAACCATGGCCCTTGAAGAATCAAAGAAGAAAGGCAAATATGTGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR CCA 90 bp | CATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGCAGACTTGAAGCTTCTTTaGCAGATTAAAAACCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: HCLRYTEKNKPHLHPGVADLKLL*QIKNRQ Trigger: CTGTCGGTTTTTAATCTGCCAAAGAAGCTTCAAGTC...TGCGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR CCA 90 bp | CTCATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGCTTCAAATGTTCAAGTaGAAGTACTCCTTTGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LIVLGIQRRINPTFTQESLQMFK*KYSFVP Trigger: TGGCACAAAGGAGTACTTCCACTTGAACATTTGAAG...CGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR GCA 90 bp | TTCAGAGTAGAGAGTAAGGGTAGAAGTAATGCACATATTTGCCTTTCTTCTTTGGTGAACAGAAGCCCCTaGCAAGAGGTGCAGTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: FRVESKGRSNAHICLSSLVNRSP*QEVQSL Trigger: TAAAGACTGCACCTCTTGGCAGGGGCTTCTGTTCAC...CAAAGAAGAAAGGCAAATATGTGCATTACTTCTACCCTTACTCTCTACTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR GCA 90 bp | CTCATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGTTCTTTGGCAGGTTATaGACAAACAGAAGAACGTTT | + |
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Preference number: 4 (lower is better) Translates to: LIVLGIQRRINPTFTQESFFGRL*TNRRTF Trigger: AAACGTTCTTCTGTTTGTGCATAACCTGCCAAAGAA...CGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR GCA 90 bp | CTCATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGAGCTATCACATGACTTaGAATTTCACAACACTTGAA | + |
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Preference number: 4 (lower is better) Translates to: LIVLGIQRRINPTFTQESSYHMT*NFTTLE Trigger: TTCAAGTGTTGTGAAATTGCAAGTCATGTGATAGCT...CGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR GCA 90 bp | CATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGCAGTGTACAAAGAATTCTaGACGTATTATTTCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HCLRYTEKNKPHLHPGVAVYKEF*TYYFRS Trigger: AGACCTGAAATAATACGTGCAGAATTCTTTGTACAC...TGCGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGCAACACTTACTATTTACTTaGAGGTCAATAATGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: IVLGIQRRINPTFTQESQHLLFT*RSIMAH Trigger: ATGGGCCATTATTGACCTCCAAGTAAATAGTAAGTG...TTGCGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR GCA 90 bp | TTCAGAGTAGAGAGTAAGGGTAGAAGTAATGCACATATTTGCCTTTCTTCTTTGGCAAGGACCCATCATTaGGTACTTTCACTCTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: FRVESKGRSNAHICLSSLARTHH*VLSLCH Trigger: ATGACAGAGTGAAAGTACGCAATGATGGGTCCTTGC...CAAAGAAGAAAGGCAAATATGTGCATTACTTCTACCCTTACTCTCTACTCTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR CCA 90 bp | TTTGATTCTTCAAGGGCCATGGTTTACATCTTCTTCCTTGATTGTCTGAAGCCTCAAGGTGTATTTACTTaGAGGTCAATAATGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: FDSSRAMVYIFFLDCLKPQGVFT*RSIMAH Trigger: ATGGGCCATTATTGACCTCCAAGTAAATACACCTTG...AGGCTTCAGACAATCAAGGAAGAAGATGTAAACCATGGCCCTTGAAGAATCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR CCA 90 bp | TTCAGAGTAGAGAGTAAGGGTAGAAGTAATGCACATATTTGCCTTTCTTCTTTGTTCTTCAACCCTAAGTaGCACCAACTGAATTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FRVESKGRSNAHICLSSLFFNPK*HQLNCE Trigger: CTCACAATTCAGTTGGTGCCACTTAGGGTTGAAGAA...CAAAGAAGAAAGGCAAATATGTGCATTACTTCTACCCTTACTCTCTACTCTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR CCA 90 bp | AATGCACATATTTGCCTTTCTTCTTTGATTCTTCAAGGGCCATGGTTTACATCTGACTTGAAGCTTCTTTaGCAGATTAAAAACCGACAG | + |
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Preference number: 4 (lower is better) Translates to: NAHICLSSLILQGPWFTSDLKLL*QIKNRQ Trigger: CTGTCGGTTTTTAATCTGCCAAAGAAGCTTCAAGTC...AGATGTAAACCATGGCCCTTGAAGAATCAAAGAAGAAAGGCAAATATGTGCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR GCA 90 bp | TTCAGAGTAGAGAGTAAGGGTAGAAGTAATGCACATATTTGCCTTTCTTCTTTGAGCTATCACATGACTTaGAATTTCACAACACTTGAA | + |
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Preference number: 4 (lower is better) Translates to: FRVESKGRSNAHICLSSLSYHMT*NFTTLE Trigger: TTCAAGTGTTGTGAAATTGCAAGTCATGTGATAGCT...CAAAGAAGAAAGGCAAATATGTGCATTACTTCTACCCTTACTCTCTACTCTGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR GCA 90 bp | AATGCACATATTTGCCTTTCTTCTTTGATTCTTCAAGGGCCATGGTTTACATCTGTGTACAAAGAATTCTaGACGTATTATTTCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: NAHICLSSLILQGPWFTSVYKEF*TYYFRS Trigger: AGACCTGAAATAATACGTGCAGAATTCTTTGTACAC...AGATGTAAACCATGGCCCTTGAAGAATCAAAGAAGAAAGGCAAATATGTGCATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR CAA 90 bp | CATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGCAGCAATTTCACAACACTaGAACGGTGCAGCTCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: HCLRYTEKNKPHLHPGVAAISQH*NGAAPE Trigger: CTCGGGAGCTGCACCGTTCAAGTGTTGTGAAATTGC...TGCGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS TCA 90 bp | CCACTGTGTGCAAGTCCCACTGCAGTAAAATTGGTAGCTATCACATaGCTTGCAATTTCACAACACTTGAACGGTGCAGCTCCCGAGTAC | + |
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Preference number: 5 (lower is better) Translates to: PLCASPTAVKLVAIT*LAISQHLNGAAPEY Trigger: GTACTCGGGAGCTGCACCGTTCAAGTGTTGTGAAATTGCAAGTCATGTGATAGCTACCAATTTTACTGCAGTGGGACTTGCACACAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS-3UTR CAA 90 bp | CTCATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGGTGCCAGGCAAAGACTaGAAGCTTCTTTGGCAGATT | + |
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Preference number: 5 (lower is better) Translates to: LIVLGIQRRINPTFTQESVPGKD*KLLWQI Trigger: AATCTGCCAAAGAAGCTTCAAGTCTTTGCCTGGCAC...CGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR CAA 90 bp | CTCATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGCCCAGAGTGGTTGAATaGGTGAGGAATGAATGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LIVLGIQRRINPTFTQESPRVVE*VRNEWL Trigger: AAGCCATTCATTCCTCACCAATTCAACCACTCTGGG...CGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR CAA 90 bp | TTTGATTCTTCAAGGGCCATGGTTTACATCTTCTTCCTTGATTGTCTGAAGCCTGCAATTTCACAACACTaGAACGGTGCAGCTCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: FDSSRAMVYIFFLDCLKPAISQH*NGAAPE Trigger: CTCGGGAGCTGCACCGTTCAAGTGTTGTGAAATTGC...AGGCTTCAGACAATCAAGGAAGAAGATGTAAACCATGGCCCTTGAAGAATCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS GCA 90 bp | ATTGGTAGCTATCACATGACTTGCAATTTCACAACACTTGAACGGTaGAGCTCCCGAGTACCAGGAAAAGGCTTTAACATTCTTTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: IGSYHMTCNFTTLER*SSRVPGKGFNILWQ Trigger: CTGCCAAAGAATGTTAAAGCCTTTTCCTGGTACTCGGGAGCTGCACCGTTCAAGTGTTGTGAAATTGCAAGTCATGTGATAGCTACCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS GCA 90 bp | GATCAACAGAGATCCATTGTTGAGTACTGTCTCTCTACCACTGTGTaGAAGTCCCACTGCAGTAAAATTGGTAGCTATCACATGACTTGC | + |
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Preference number: 5 (lower is better) Translates to: DQQRSIVEYCLSTTV*KSHCSKIGSYHMTC Trigger: GCAAGTCATGTGATAGCTACCAATTTTACTGCAGTGGGACTTGCACACAGTGGTAGAGAGACAGTACTCAACAATGGATCTCTGTTGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS-3UTR CAA 90 bp | CATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGCATCTTTCTTCTTGACATaGAAGAGAAGCAAGGACCCA | + |
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Preference number: 5 (lower is better) Translates to: HCLRYTEKNKPHLHPGVASFFLT*KRSKDP Trigger: TGGGTCCTTGCTTCTCTTCAATGTCAAGAAGAAAGA...TGCGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR CAA 90 bp | ATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGCAACCTGCGTCTTTCTTCTaGACATTGAAGAGAAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: IVLGIQRRINPTFTQESQPASFF*TLKRSK Trigger: CTTGCTTCTCTTCAATGTCAAGAAGAAAGACGCAGG...TTGCGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR CAA 90 bp | ATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGCAAAACAGAGATCCATTGTaGAGTACTGTCTCTCTACCA | + |
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Preference number: 5 (lower is better) Translates to: IVLGIQRRINPTFTQESQNRDPL*STVSLP Trigger: TGGTAGAGAGACAGTACTCAACAATGGATCTCTGTT...TTGCGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR CAA 90 bp | CTCATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGATCAACAGAGATCCATaGTTGAGTACTGTCTCTCTA | + |
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Preference number: 5 (lower is better) Translates to: LIVLGIQRRINPTFTQESINRDP*LSTVSL Trigger: TAGAGAGACAGTACTCAACAATGGATCTCTGTTGAT...CGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR CAA 90 bp | ATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGCAACAACTGAATTGTGAGTaGAGAAGGGGTAAGATGCTT | + |
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Preference number: 5 (lower is better) Translates to: IVLGIQRRINPTFTQESQQLNCE*RRGKML Trigger: AAGCATCTTACCCCTTCTCAACTCACAATTCAGTTG...TTGCGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS GCA 90 bp | TCCATTGTTGAGTACTGTCTCTCTACCACTGTGTGCAAGTCCCACTaGAGTAAAATTGGTAGCTATCACATGACTTGCAATTTCACAACA | + |
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Preference number: 5 (lower is better) Translates to: SIVEYCLSTTVCKSH*SKIGSYHMTCNFTT Trigger: TGTTGTGAAATTGCAAGTCATGTGATAGCTACCAATTTTACTGCAGTGGGACTTGCACACAGTGGTAGAGAGACAGTACTCAACAATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS-3UTR CAA 90 bp | ATTGTCTTAGGTATACAGAGAAGAATAAACCCCACCTTCACCCAGGAGTCGCAATTTCTGGTAACACTCTaGATCAACAGAGATCCATTG | + |
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Preference number: 5 (lower is better) Translates to: IVLGIQRRINPTFTQESQFLVTL*INRDPL Trigger: CAATGGATCTCTGTTGATCAAGAGTGTTACCAGAAA...TTGCGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081703.8 |
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| CDS-3UTR CAA 90 bp | TTCTTTGATTCTTCAAGGGCCATGGTTTACATCTTCTTCCTTGATTGTCTGAAGCCCAGAGTGGTTGAATaGGTGAGGAATGAATGGCTT | + |
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Preference number: 5 (lower is better) Translates to: FFDSSRAMVYIFFLDCLKPRVVE*VRNEWL Trigger: AAGCCATTCATTCCTCACCAATTCAACCACTCTGGG...CTTCAGACAATCAAGGAAGAAGATGTAAACCATGGCCCTTGAAGAATCAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR CAA 90 bp | TTCAGAGTAGAGAGTAAGGGTAGAAGTAATGCACATATTTGCCTTTCTTCTTTGGTGCCAGGCAAAGACTaGAAGCTTCTTTGGCAGATT | + |
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Preference number: 5 (lower is better) Translates to: FRVESKGRSNAHICLSSLVPGKD*KLLWQI Trigger: AATCTGCCAAAGAAGCTTCAAGTCTTTGCCTGGCAC...CAAAGAAGAAAGGCAAATATGTGCATTACTTCTACCCTTACTCTCTACTCTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR CAA 90 bp | TTTGATTCTTCAAGGGCCATGGTTTACATCTTCTTCCTTGATTGTCTGAAGCCTTCTTTCTTCTTGACATaGAAGAGAAGCAAGGACCCA | + |
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Preference number: 5 (lower is better) Translates to: FDSSRAMVYIFFLDCLKPSFFLT*KRSKDP Trigger: TGGGTCCTTGCTTCTCTTCAATGTCAAGAAGAAAGA...AGGCTTCAGACAATCAAGGAAGAAGATGTAAACCATGGCCCTTGAAGAATCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR CAA 90 bp | AATGCACATATTTGCCTTTCTTCTTTGATTCTTCAAGGGCCATGGTTTACATCTCCTGCGTCTTTCTTCTaGACATTGAAGAGAAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: NAHICLSSLILQGPWFTSPASFF*TLKRSK Trigger: CTTGCTTCTCTTCAATGTCAAGAAGAAAGACGCAGG...AGATGTAAACCATGGCCCTTGAAGAATCAAAGAAGAAAGGCAAATATGTGCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR CAA 90 bp | AATGCACATATTTGCCTTTCTTCTTTGATTCTTCAAGGGCCATGGTTTACATCTAACAGAGATCCATTGTaGAGTACTGTCTCTCTACCA | + |
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Preference number: 5 (lower is better) Translates to: NAHICLSSLILQGPWFTSNRDPL*STVSLP Trigger: TGGTAGAGAGACAGTACTCAACAATGGATCTCTGTT...AGATGTAAACCATGGCCCTTGAAGAATCAAAGAAGAAAGGCAAATATGTGCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS-3UTR CAA 90 bp | TTCAGAGTAGAGAGTAAGGGTAGAAGTAATGCACATATTTGCCTTTCTTCTTTGCAACTGAATTGTGAGTaGAGAAGGGGTAAGATGCTT | + |
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Preference number: 5 (lower is better) Translates to: FRVESKGRSNAHICLSSLQLNCE*RRGKML Trigger: AAGCATCTTACCCCTTCTCAACTCACAATTCAGTTG...CAAAGAAGAAAGGCAAATATGTGCATTACTTCTACCCTTACTCTCTACTCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS TCA 90 bp | TTCAAATGTTCAAGTGGAAGTACTCCTTTGTGCCAGGCAAAGACTTaGAGCTTCTTTGGCAGATTAAAAACCGACAGAAAAATATTGATG | + |
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Preference number: 5 (lower is better) Translates to: FKCSSGSTPLCQAKT*SFFGRLKTDRKILM Trigger: CATCAATATTTTTCTGTCGGTTTTTAATCTGCCAAAGAAGCTTCAAGTCTTTGCCTGGCACAAAGGAGTACTTCCACTTGAACATTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS-3UTR CAA 90 bp | AATGCACATATTTGCCTTTCTTCTTTGATTCTTCAAGGGCCATGGTTTACATCTTTTCTGGTAACACTCTaGATCAACAGAGATCCATTG | + |
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Preference number: 5 (lower is better) Translates to: NAHICLSSLILQGPWFTSFLVTL*INRDPL Trigger: CAATGGATCTCTGTTGATCAAGAGTGTTACCAGAAA...AGATGTAAACCATGGCCCTTGAAGAATCAAAGAAGAAAGGCAAATATGTGCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108488.7 |
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| CDS GCA 72 bp | CAGCATGTTAAAAGAGAGACTGTGAACAGAAGCCCCTaGCAAGAGGTGCAGTCTTTACAGGAAAGTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: QHVKRETVNRSP*QEVQSLQESAA Trigger: TGCTGCACTTTCCTGTAAAGACTGCACCTCTTGGCAGGGGCTTCTGTTCACAGTCTCTCTTTTAACATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS CAA 90 bp | CCTGAGTCTTTTCTGGTAACACTCTTGATCAACAGAGATCCATTGTaGAGTACTGTCTCTCTACCACTGTGTGCAAGTCCCACTGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: PESFLVTLLINRDPL*STVSLPLCASPTAV Trigger: TACTGCAGTGGGACTTGCACACAGTGGTAGAGAGACAGTACTCAACAATGGATCTCTGTTGATCAAGAGTGTTACCAGAAAAGACTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS GCA 72 bp | TCCCACTGCAGTAAAATTGGTAGCTATCACATGACTTaGAATTTCACAACACTTGAACGGTGCAGCTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: SHCSKIGSYHMT*NFTTLERCSSR Trigger: TCGGGAGCTGCACCGTTCAAGTGTTGTGAAATTGCAAGTCATGTGATAGCTACCAATTTTACTGCAGTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS CAA 90 bp | TATCCTGAGTCTTTTCTGGTAACACTCTTGATCAACAGAGATCCATaGTTGAGTACTGTCTCTCTACCACTGTGTGCAAGTCCCACTGCA | + |
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Preference number: 6 (lower is better) Translates to: YPESFLVTLLINRDP*LSTVSLPLCASPTA Trigger: TGCAGTGGGACTTGCACACAGTGGTAGAGAGACAGTACTCAACAATGGATCTCTGTTGATCAAGAGTGTTACCAGAAAAGACTCAGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS GCA 72 bp | GAGTACTGTCTCTCTACCACTGTGTGCAAGTCCCACTaGAGTAAAATTGGTAGCTATCACATGACTTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: EYCLSTTVCKSH*SKIGSYHMTCN Trigger: ATTGCAAGTCATGTGATAGCTACCAATTTTACTGCAGTGGGACTTGCACACAGTGGTAGAGAGACAGTACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS GCA 72 bp | AGATCCATTGTTGAGTACTGTCTCTCTACCACTGTGTaGAAGTCCCACTGCAGTAAAATTGGTAGCTATCAC | + |
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Preference number: 6 (lower is better) Translates to: RSIVEYCLSTTV*KSHCSKIGSYH Trigger: GTGATAGCTACCAATTTTACTGCAGTGGGACTTGCACACAGTGGTAGAGAGACAGTACTCAACAATGGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS CAA 72 bp | TTTCTGGTAACACTCTTGATCAACAGAGATCCATTGTaGAGTACTGTCTCTCTACCACTGTGTGCAAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: FLVTLLINRDPL*STVSLPLCASP Trigger: GGGACTTGCACACAGTGGTAGAGAGACAGTACTCAACAATGGATCTCTGTTGATCAAGAGTGTTACCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS GCA 72 bp | TATCACATGACTTGCAATTTCACAACACTTGAACGGTaGAGCTCCCGAGTACCAGGAAAAGGCTTTAACATT | + |
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Preference number: 6 (lower is better) Translates to: YHMTCNFTTLER*SSRVPGKGFNI Trigger: AATGTTAAAGCCTTTTCCTGGTACTCGGGAGCTGCACCGTTCAAGTGTTGTGAAATTGCAAGTCATGTGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS CAA 90 bp | GGCGGTGTACAAAGAATTCTGCACGTATTATTTCAGGTCTTGAGGTaGAATCAAGTGTTCGTAGAGTGTAGTATCCTGAGTCTTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: GGVQRILHVLFQVLR*NQVFVECSILSLFW Trigger: CCAGAAAAGACTCAGGATACTACACTCTACGAACACTTGATTCAACCTCAAGACCTGAAATAATACGTGCAGAATTCTTTGTACACCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS TCA 72 bp | TCAAGTGGAAGTACTCCTTTGTGCCAGGCAAAGACTTaGAGCTTCTTTGGCAGATTAAAAACCGACAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: SSGSTPLCQAKT*SFFGRLKTDRK Trigger: TTTTCTGTCGGTTTTTAATCTGCCAAAGAAGCTTCAAGTCTTTGCCTGGCACAAAGGAGTACTTCCACTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS CAA 90 bp | ATAGTGGGCGGTGTACAAAGAATTCTGCACGTATTATTTCAGGTCTaGAGGTTGAATCAAGTGTTCGTAGAGTGTAGTATCCTGAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: IVGGVQRILHVLFQV*RLNQVFVECSILSL Trigger: AAGACTCAGGATACTACACTCTACGAACACTTGATTCAACCTCAAGACCTGAAATAATACGTGCAGAATTCTTTGTACACCGCCCACTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS TCA 72 bp | TGTCATAATATGCATACCCCAGAGTGGTTGAATTGGTaGGGAATGAATGGCTTGCTATCTTCAAATGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: CHNMHTPEWLNW*GMNGLLSSNVQ Trigger: TTGAACATTTGAAGATAGCAAGCCATTCATTCCTCACCAATTCAACCACTCTGGGGTATGCATATTATGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS CAA 72 bp | GGTGTACAAAGAATTCTGCACGTATTATTTCAGGTCTaGAGGTTGAATCAAGTGTTCGTAGAGTGTAGTATC | + |
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Preference number: 6 (lower is better) Translates to: GVQRILHVLFQV*RLNQVFVECSI Trigger: GATACTACACTCTACGAACACTTGATTCAACCTCAAGACCTGAAATAATACGTGCAGAATTCTTTGTACACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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| CDS CCA 72 bp | TACTCCTTTGTGCCAGGCAAAGACTTGAAGCTTCTTTaGCAGATTAAAAACCGACAGAAAAATATTGATGTT | + |
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Preference number: 6 (lower is better) Translates to: YSFVPGKDLKLL*QIKNRQKNIDV Trigger: AACATCAATATTTTTCTGTCGGTTTTTAATCTGCCAAAGAAGCTTCAAGTCTTTGCCTGGCACAAAGGAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000081703.8 ENSMUST00000108488.7 |
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