Pregenerated sensors for CEACAM11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030368Ensembl transcript IDs: ENSMUST00000094799.3
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGAATCAGCCAGCAGGTTAAAAGGGAGACTGTGAGCAGGATCCCCTaGCAGGAGGTAGAGTCTTTGCAGGAAAGTGCAAGAGAGTCCATC | + |
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Preference number: 5 (lower is better) Translates to: GISQQVKRETVSRIP*QEVESLQESARESI Trigger: GATGGACTCTCTTGCACTTTCCTGCAAAGACTCTACCTCCTGGCAGGGGATCCTGCTCACAGTCTCCCTTTTAACCTGCTGGCTGATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS GCA 90 bp | GATCAGCAGAGATCCATTTTTGAGTACAATCTCTCTACCACTGTGTaGAGGTCCCACCACAGTAGAATTGGTAGCTGTCACATGACTTGC | + |
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Preference number: 5 (lower is better) Translates to: DQQRSIFEYNLSTTV*RSHHSRIGSCHMTC Trigger: GCAAGTCATGTGACAGCTACCAATTCTACTGTGGTGGGACCTGCACACAGTGGTAGAGAGATTGTACTCAAAAATGGATCTCTGCTGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS TCA 90 bp | CCACTGTGTGCAGGTCCCACCACAGTAGAATTGGTAGCTGTCACATaGCTTGCAATTTCACAATTCTTGAGTGGTTTAACTCCTGTGTAC | + |
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Preference number: 5 (lower is better) Translates to: PLCAGPTTVELVAVT*LAISQFLSGLTPVY Trigger: GTACACAGGAGTTAAACCACTCAAGAATTGTGAAATTGCAAGTCATGTGACAGCTACCAATTCTACTGTGGTGGGACCTGCACACAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS TCA 90 bp | CCACAGATATGGTTCGGAAGGTGTAAAGCCCTGTGTCATTCTGAGTaGCATTCAAGAGCACCAGGGTTCCATCATTACATATTATCACTC | + |
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Preference number: 5 (lower is better) Translates to: PQIWFGRCKALCHSE*HSRAPGFHHYILSL Trigger: GAGTGATAATATGTAATGATGGAACCCTGGTGCTCTTGAATGTCACTCAGAATGACACAGGGCTTTACACCTTCCGAACCATATCTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS TCA 90 bp | CTCGTCTTCGACTCTTCGAGAAAGTCCATGGTTTACTTGTTGGTCTaGGATTGGGTGAAGCCCAATTTCCAGGTTTATTTACTTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: LVFDSSRKSMVYLLV*DWVKPNFQVYLLGG Trigger: ACCTCCAAGTAAATAAACCTGGAAATTGGGCTTCACCCAATCTCAGACCAACAAGTAAACCATGGACTTTCTCGAAGAGTCGAAGACGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS CCA 90 bp | AAGTGGAAGTACTCCTTTGTGCCAGGCAAAGCCTTGAAGCTTCTGTaGCAGATGATAAACCTGCAGGAGAATATTGTCATTTTCTTCAAC | + |
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Preference number: 5 (lower is better) Translates to: KWKYSFVPGKALKLL*QMINLQENIVIFFN Trigger: GTTGAAGAAAATGACAATATTCTCCTGCAGGTTTATCATCTGCCACAGAAGCTTCAAGGCTTTGCCTGGCACAAAGGAGTACTTCCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS TCA 90 bp | ACTCTTCGAGAAAGTCCATGGTTTACTTGTTGGTCTGAGATTGGGTaGAGCCCAATTTCCAGGTTTATTTACTTGGAGGTCCAAAATGTC | + |
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Preference number: 5 (lower is better) Translates to: TLRESPWFTCWSEIG*SPISRFIYLEVQNV Trigger: GACATTTTGGACCTCCAAGTAAATAAACCTGGAAATTGGGCTTCACCCAATCTCAGACCAACAAGTAAACCATGGACTTTCTCGAAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS CCA 90 bp | AGAATTGGTAGCTGTCACATGACTTGCAATTTCACAATTCTTGAGTaGTTTAACTCCTGTGTACCAGGAAAGGGTTTGAACATTCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: RIGSCHMTCNFTILE*FNSCVPGKGLNILW Trigger: CCAGAGAATGTTCAAACCCTTTCCTGGTACACAGGAGTTAAACCACTCAAGAATTGTGAAATTGCAAGTCATGTGACAGCTACCAATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS CCA 90 bp | GTTGGTCTGAGATTGGGTGAAGCCCAATTTCCAGGTTTATTTACTTaGAGGTCCAAAATGTCCCATTCTGATTTCAAATCCACAGATATG | + |
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Preference number: 5 (lower is better) Translates to: VGLRLGEAQFPGLFT*RSKMSHSDFKSTDM Trigger: CATATCTGTGGATTTGAAATCAGAATGGGACATTTTGGACCTCCAAGTAAATAAACCTGGAAATTGGGCTTCACCCAATCTCAGACCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS TCA 90 bp | TCACAATTCTTGAGTGGTTTAACTCCTGTGTACCAGGAAAGGGTTTaGACATTCTCTGGCAAGTTATGCACAAACAGAAGAACATTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SQFLSGLTPVYQERV*TFSGKLCTNRRTFS Trigger: GGAAAATGTTCTTCTGTTTGTGCATAACTTGCCAGAGAATGTTCAAACCCTTTCCTGGTACACAGGAGTTAAACCACTCAAGAATTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS GCA 72 bp | CAGCAGGTTAAAAGGGAGACTGTGAGCAGGATCCCCTaGCAGGAGGTAGAGTCTTTGCAGGAAAGTGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: QQVKRETVSRIP*QEVESLQESAR Trigger: TCTTGCACTTTCCTGCAAAGACTCTACCTCCTGGCAGGGGATCCTGCTCACAGTCTCCCTTTTAACCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS CCA 72 bp | TCAACAGCAATGGGAGGCACTGATTCAATGGTGATCTaGGTGGTAGTTGGAATCAGCCAGCAGGTTAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: STAMGGTDSMVI*VVVGISQQVKR Trigger: CCTTTTAACCTGCTGGCTGATTCCAACTACCACCCAGATCACCATTGAATCAGTGCCTCCCATTGCTGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS GCA 72 bp | AGATCCATTTTTGAGTACAATCTCTCTACCACTGTGTaGAGGTCCCACCACAGTAGAATTGGTAGCTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: RSIFEYNLSTTV*RSHHSRIGSCH Trigger: GTGACAGCTACCAATTCTACTGTGGTGGGACCTGCACACAGTGGTAGAGAGATTGTACTCAAAAATGGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS CAA 72 bp | TTTCTGGTGGTACTCTTGATCAGCAGAGATCCATTTTaGAGTACAATCTCTCTACCACTGTGTGCAGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: FLVVLLISRDPF*STISLPLCAGP Trigger: GGGACCTGCACACAGTGGTAGAGAGATTGTACTCAAAAATGGATCTCTGCTGATCAAGAGTACCACCAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS CCA 72 bp | GAATGGGTGAGGAATGAATGGCTTGCTATCTTAAAATaGTCAAGTGGAAGTACTCCTTTGTGCCAGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: EWVRNEWLAILK*SSGSTPLCQAK Trigger: CTTTGCCTGGCACAAAGGAGTACTTCCACTTGACCATTTTAAGATAGCAAGCCATTCATTCCTCACCCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS CCA 72 bp | GCACTCCCCAGCATAGTTGAATGGGTGAGGAATGAATaGCTTGCTATCTTAAAATGGTCAAGTGGAAGTACT | + |
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Preference number: 6 (lower is better) Translates to: ALPSIVEWVRNE*LAILKWSSGST Trigger: AGTACTTCCACTTGACCATTTTAAGATAGCAAGCCATTCATTCCTCACCCATTCAACTATGCTGGGGAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS TCA 72 bp | GCAGGTCCCACCACAGTAGAATTGGTAGCTGTCACATaGCTTGCAATTTCACAATTCTTGAGTGGTTTAACT | + |
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Preference number: 6 (lower is better) Translates to: AGPTTVELVAVT*LAISQFLSGLT Trigger: AGTTAAACCACTCAAGAATTGTGAAATTGCAAGTCATGTGACAGCTACCAATTCTACTGTGGTGGGACCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS TCA 72 bp | GAAAGTCCATGGTTTACTTGTTGGTCTGAGATTGGGTaGAGCCCAATTTCCAGGTTTATTTACTTGGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: ESPWFTCWSEIG*SPISRFIYLEV Trigger: GACCTCCAAGTAAATAAACCTGGAAATTGGGCTTCACCCAATCTCAGACCAACAAGTAAACCATGGACTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS CCA 72 bp | AACTCCTGTGTACCAGGAAAGGGTTTGAACATTCTCTaGCAAGTTATGCACAAACAGAAGAACATTTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: NSCVPGKGLNIL*QVMHKQKNIFP Trigger: GGGGAAAATGTTCTTCTGTTTGTGCATAACTTGCCAGAGAATGTTCAAACCCTTTCCTGGTACACAGGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS TCA 72 bp | TTGAGTGGTTTAACTCCTGTGTACCAGGAAAGGGTTTaGACATTCTCTGGCAAGTTATGCACAAACAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LSGLTPVYQERV*TFSGKLCTNRR Trigger: TCTTCTGTTTGTGCATAACTTGCCAGAGAATGTTCAAACCCTTTCCTGGTACACAGGAGTTAAACCACTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS TCA 72 bp | GACTCTTCGAGAAAGTCCATGGTTTACTTGTTGGTCTaGGATTGGGTGAAGCCCAATTTCCAGGTTTATTTA | + |
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Preference number: 6 (lower is better) Translates to: DSSRKSMVYLLV*DWVKPNFQVYL Trigger: TAAATAAACCTGGAAATTGGGCTTCACCCAATCTCAGACCAACAAGTAAACCATGGACTTTCTCGAAGAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS GCA 72 bp | TCCCACCACAGTAGAATTGGTAGCTGTCACATGACTTaGAATTTCACAATTCTTGAGTGGTTTAACTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SHHSRIGSCHMT*NFTILEWFNSC Trigger: ACAGGAGTTAAACCACTCAAGAATTGTGAAATTGCAAGTCATGTGACAGCTACCAATTCTACTGTGGTGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS CCA 72 bp | AGCTGTCACATGACTTGCAATTTCACAATTCTTGAGTaGTTTAACTCCTGTGTACCAGGAAAGGGTTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: SCHMTCNFTILE*FNSCVPGKGLN Trigger: GTTCAAACCCTTTCCTGGTACACAGGAGTTAAACCACTCAAGAATTGTGAAATTGCAAGTCATGTGACAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS CCA 72 bp | AGATTGGGTGAAGCCCAATTTCCAGGTTTATTTACTTaGAGGTCCAAAATGTCCCATTCTGATTTCAAATCC | + |
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Preference number: 6 (lower is better) Translates to: RLGEAQFPGLFT*RSKMSHSDFKS Trigger: GGATTTGAAATCAGAATGGGACATTTTGGACCTCCAAGTAAATAAACCTGGAAATTGGGCTTCACCCAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS CAA 90 bp | TTCACAATTCTTGAGTGGTTTAACTCCTGTGTACCAGGAAAGGGTTaGAACATTCTCTGGCAAGTTATGCACAAACAGAAGAACATTTTC | + |
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Preference number: 6 (lower is better) Translates to: FTILEWFNSCVPGKG*NILWQVMHKQKNIF Trigger: GAAAATGTTCTTCTGTTTGTGCATAACTTGCCAGAGAATGTTCAAACCCTTTCCTGGTACACAGGAGTTAAACCACTCAAGAATTGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS CAA 90 bp | GGCTGTGAACAAAGAATTCTGCACGTATTAATTCAGGTCTTGAGGTaGTATCAAGTATTTGTAGAGTGTAATAACCTGAGTCTTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: GCEQRILHVLIQVLR*YQVFVECNNLSLFW Trigger: CCAGAAAAGACTCAGGTTATTACACTCTACAAATACTTGATACAACCTCAAGACCTGAATTAATACGTGCAGAATTCTTTGTTCACAGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS CAA 90 bp | AAAGTGGGCTGTGAACAAAGAATTCTGCACGTATTAATTCAGGTCTaGAGGTTGTATCAAGTATTTGTAGAGTGTAATAACCTGAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: KVGCEQRILHVLIQV*RLYQVFVECNNLSL Trigger: AAGACTCAGGTTATTACACTCTACAAATACTTGATACAACCTCAAGACCTGAATTAATACGTGCAGAATTCTTTGTTCACAGCCCACTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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| CDS CAA 72 bp | CAAAGAATTCTGCACGTATTAATTCAGGTCTTGAGGTaGTATCAAGTATTTGTAGAGTGTAATAACCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: QRILHVLIQVLR*YQVFVECNNLS Trigger: ACTCAGGTTATTACACTCTACAAATACTTGATACAACCTCAAGACCTGAATTAATACGTGCAGAATTCTTTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094799.3 |
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