Pregenerated sensors for CEACAM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074272Ensembl transcript IDs: ENSMUST00000098666.9, ENSMUST00000098668.3, ENSMUST00000098669.8, ENSMUST00000205308.2, ENSMUST00000206171.2, ENSMUST00000206583.2, ENSMUST00000206676.2, ENSMUST00000206687.2
Found 194 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTCCTGAGAGTGCAGGGCAGACAGAATGTCCAGGTAGCCAGGCCTaGTGGCCAGGGCTGCAGTCTGAGCAGGTGGGGTGCTGCAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: FPESAGQTECPGSQA*WPGLQSEQVGCCRR Trigger: CCTTCTGCAGCACCCCACCTGCTCAGACTGCAGCCCTGGCCACCAGGCCTGGCTACCTGGACATTCTGTCTGCCCTGCACTCTCAGGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098666.9 |
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| 3UTR CCA 90 bp | TGTTTGCCTCTCCTCCTGCTGCTGCACTCATCCCTGGTGCCCTGGTaGGGAAGGCAGGATTCAAGGCTACAGAAAGGCCAGGGCCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: CLPLLLLLHSSLVPW*GRQDSRLQKGQGQV Trigger: CACCTGGCCCTGGCCTTTCTGTAGCCTTGAATCCTGCCTTCCCCACCAGGGCACCAGGGATGAGTGCAGCAGCAGGAGGAGAGGCAAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098666.9 |
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| 3UTR CCA 90 bp | GACTGTTTGCCTCTCCTCCTGCTGCTGCACTCATCCCTGGTGCCCTaGTGGGGAAGGCAGGATTCAAGGCTACAGAAAGGCCAGGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: DCLPLLLLLHSSLVP*WGRQDSRLQKGQGQ Trigger: CTGGCCCTGGCCTTTCTGTAGCCTTGAATCCTGCCTTCCCCACCAGGGCACCAGGGATGAGTGCAGCAGCAGGAGGAGAGGCAAACAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098666.9 |
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| 3UTR TCA 90 bp | GCGCGCGCGCATGTGTACGTGTGTGTGTGTGCTGAGACCCTCCAGTaGGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: ARAHVYVCVCAETLQ*GTESGNASLVQPAG Trigger: TCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGAGGGTCTCAGCACACACACACACGTACACATGCGCGCGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
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| 3UTR GCA 90 bp | GAGTTGTCAGAAGGAGCCAGATTGTGGTTGGAGGCTGAGGGTTTGTaGTCTGTGAGATCTCGCTGGTCACTTCCCCCGCCAGACTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: ELSEGARLWLEAEGL*SVRSRWSLPPPDFL Trigger: CAGGAAGTCTGGCGGGGGAAGTGACCAGCGAGATCTCACAGAGCACAAACCCTCAGCCTCCAACCACAATCTGGCTCCTTCTGACAACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
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| 3UTR TCA 90 bp | CTTGTTAGGAGAGTTGTCAGAAGGAGCCAGATTGTGGTTGGAGGCTaGGGGTTTGTGCTCTGTGAGATCTCGCTGGTCACTTCCCCCGCC | + |
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Preference number: 1 (lower is better) Translates to: LVRRVVRRSQIVVGG*GFVLCEISLVTSPA Trigger: GGCGGGGGAAGTGACCAGCGAGATCTCACAGAGCACAAACCCTCAGCCTCCAACCACAATCTGGCTCCTTCTGACAACTCTCCTAACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
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| 3UTR CCA 90 bp | GTGGCTCTTGGAGAAGAAGGGGCTGAAGTTGGCCGGTTGGGTTGCTaGGAATTGAAGTTCAGGACAGTGTATGCGACGTCATCCACCTTG | + |
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Preference number: 1 (lower is better) Translates to: VALGEEGAEVGRLGC*ELKFRTVYATSSTL Trigger: CAAGGTGGATGACGTCGCATACACTGTCCTGAACTTCAATTCCCAGCAACCCAACCGGCCAACTTCAGCCCCTTCTTCTCCAAGAGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000206583.2 ENSMUST00000206687.2 |
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| 3UTR CCA 90 bp | GTGCTGAGACCCTCCAGTGAGGAACAGAATCCGGGAATGCATCACTaGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: VLRPSSEEQNPGMHH*CSQQDRRTDYAHFF Trigger: AAAGAAGTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGAGGGTCTCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| 3UTR TCA 90 bp | CTGAGGATGCTGTTGTTCTGGGAGAGTGTCATTCTCTCTGTGAGCTaGAGACTCTGGCTATTGAAGAGCCACTGGATGTTGGCTCCAATG | + |
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Preference number: 1 (lower is better) Translates to: LRMLLFWESVILSVS*RLWLLKSHWMLAPM Trigger: CATTGGAGCCAACATCCAGTGGCTCTTCAATAGCCAGAGTCTTCAGCTCACAGAGAGAATGACACTCTCCCAGAACAACAGCATCCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
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| 3UTR CCA 90 bp | CCCAGATGGGTAAGCATGACAGTTGTCGGGTGTGTAGATTGCCCATaGAGGTTTGATCTTCTCATGTATGGTGGCTTCCAATCAGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: PRWVSMTVVGCVDCP*RFDLLMYGGFQSAF Trigger: AAAGGCTGATTGGAAGCCACCATACATGAGAAGATCAAACCTCCATGGGCAATCTACACACCCGACAACTGTCATGCTTACCCATCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
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| 3UTR CCA 90 bp | ACCAGTCTGTCTTTCTGTGCAGTGTTGAGGAGTAGAGACCCATACTaGATTTCACAGTTGTGTCTCTTCAAGAATACTTTTCTCAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: TSLSFCAVLRSRDPY*ISQLCLFKNTFLSL Trigger: CAAGCTGAGAAAAGTATTCTTGAAGAGACACAACTGTGAAATCCAGTATGGGTCTCTACTCCTCAACACTGCACAGAAAGACAGACTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
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| 3UTR CAA 90 bp | GGAGAGTTGTCAGAAGGAGCCAGATTGTGGTTGGAGGCTGAGGGTTaGTGCTCTGTGAGATCTCGCTGGTCACTTCCCCCGCCAGACTTC | + |
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Preference number: 2 (lower is better) Translates to: GELSEGARLWLEAEG*CSVRSRWSLPPPDF Trigger: GAAGTCTGGCGGGGGAAGTGACCAGCGAGATCTCACAGAGCACAAACCCTCAGCCTCCAACCACAATCTGGCTCCTTCTGACAACTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTTCCGGGAATGCATCACTaGTGCAGCCAGCAGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: GNASLVQPAGQTDRLCSLPGMHH*CSQQDR Trigger: TCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGG...AAGTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| 3UTR CAA 90 bp | GCGACGTCATCCACCTTGTTAGGAGAGTTGTCAGAAGGAGCCAGATaGTGGTTGGAGGCTGAGGGTTTGTGCTCTGTGAGATCTCGCTGG | + |
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Preference number: 2 (lower is better) Translates to: ATSSTLLGELSEGAR*WLEAEGLCSVRSRW Trigger: CCAGCGAGATCTCACAGAGCACAAACCCTCAGCCTCCAACCACAATCTGGCTCCTTCTGACAACTCTCCTAACAAGGTGGATGACGTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
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| 3UTR-3UTR CCA 90 bp | GAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTTCTCCGGGAATGCATCACTaGTGCAGCCAGCAGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: ECITGAASRTDGQIMLTSPGMHH*CSQQDR Trigger: TCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGG...AGAAGTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGCTGCTGCACTCATCCCTGGTGCCCTGGTGGGGAAGGCAGGATTCAAGGTCTAGTTGCTGTGAGTaGATTTTCTGGAGAAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LLLLHSSLVPWWGRQDSRSSCCE*IFWRKA Trigger: AGCCTTTCTCCAGAAAATCCACTCACAGCAACTAGA...CCTTGAATCCTGCCTTCCCCACCAGGGCACCAGGGATGAGTGCAGCAGCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098666.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGAAGTTGGCCGGTTGGGTTGCTGGGAATTGAAGTTCAGGACAGTGTATGCGCAACTCCAATCACGATaGCAGCAATGGCGCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: AEVGRLGCWELKFRTVYAQLQSR*QQWRHL Trigger: CAGATGGCGCCATTGCTGGCATCGTGATTGGAGTTG...CGCATACACTGTCCTGAACTTCAATTCCCAGCAACCCAACCGGCCAACTTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
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| 3UTR-3UTR CCA 90 bp | CTATTGAAGAGCCACTGGATGTTGGCTCCAATGTCATTCGACAAGCAGGTCAGGCCGGGAATGCATCACTaGTGCAGCCAGCAGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: LLKSHWMLAPMSFDKQVRPGMHH*CSQQDR Trigger: TCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGG...CCTGACCTGCTTGTCGAATGACATTGGAGCCAACATCCAGTGGCTCTTCAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
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| 3UTR-3UTR TCA 90 bp | ACGATGCCAGCAATGGCGCCATCTGAGAGGCCTCCTTGTGTTGGGTCAAATATTTTCGAGATTTCACACTaGTACTCGCCGGCATCTTCC | + |
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Preference number: 2 (lower is better) Translates to: TMPAMAPSERPPCVGSNIFEISH*YSPASS Trigger: GGAAGATGCCGGCGAGTATCAGTGTGAAATCTCGAA...AATATTTGACCCAACACAAGGAGGCCTCTCAGATGGCGCCATTGCTGGCATCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTAAGGGAGACAGAAATCTAGTGGCCCTAAGGCAAAGTGATCAGCTCGCACTCGAATGTCCCAGATaGGTAAGCATGACAGTTGTC | + |
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Preference number: 2 (lower is better) Translates to: GAKGDRNLVALRQSDQLALECPR*VSMTVV Trigger: GACAACTGTCATGCTTACCCATCTGGGACATTCGAG...TGCGAGCTGATCACTTTGCCTTAGGGCCACTAGATTTCTGTCTCCCTTAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
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| 3UTR CAA 90 bp | TGCTGGGAATTGAAGTTCAGGACAGTGTATGCGACGTCATCCACCTaGTTAGGAGAGTTGTCAGAAGGAGCCAGATTGTGGTTGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: CWELKFRTVYATSST*LGELSEGARLWLEA Trigger: AGCCTCCAACCACAATCTGGCTCCTTCTGACAACTCTCCTAACAAGGTGGATGACGTCGCATACACTGTCCTGAACTTCAATTCCCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTCTGAATAGGTCAATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGGTGCCGGGAATGCATCACTaGTGCAGCCAGCAGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: GALNRSIFNNLGQESERVPGMHH*CSQQDR Trigger: TCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGG...CACCCTTTCACTTTCCTGACCCAGATTGTTGAAAATTGACCTATTCAGAGCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTTAATAAACTGTTTCTGTaGCTCTTGGAGAAGAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GNASLVQPAGQTDRLCSLNKLFL*LLEKKG Trigger: CCCCTTCTTCTCCAAGAGCCACAGAAACAGTTTATT...AAGTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGAAGTTGGCCGGTTGGGTTGCTGGGAATTGAAGTTCAGGACAGTGTATGCGAATAAACTGTTTCTGTaGCTCTTGGAGAAGAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: AEVGRLGCWELKFRTVYANKLFL*LLEKKG Trigger: CCCCTTCTTCTCCAAGAGCCACAGAAACAGTTTATT...CGCATACACTGTCCTGAACTTCAATTCCCAGCAACCCAACCGGCCAACTTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000206583.2 ENSMUST00000206687.2 |
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| 3UTR-3UTR TCA 90 bp | CCATCTGAGAGGCCTCCTTGTGTTGGGTCAAATATTATGTCCAGCTTGATTGAGGAAGACTCTGGCTATTaGAGAGCCACTGGATGTTGG | + |
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Preference number: 2 (lower is better) Translates to: PSERPPCVGSNIMSSLIEEDSGY*RATGCW Trigger: CCAACATCCAGTGGCTCTTCAATAGCCAGAGTCTTC...CTCAATCAAGCTGGACATAATATTTGACCCAACACAAGGAGGCCTCTCAGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
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| 3UTR CAA 90 bp | GAGATAATTCCAACACACACTCTTGTAGTAGACTCATGGGACCCATaGACCAGTCTGTCTTTCTGTGCAGTGTTGAGGAGTAGAGACCCA | + |
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Preference number: 2 (lower is better) Translates to: EIIPTHTLVVDSWDP*TSLSFCAVLRSRDP Trigger: TGGGTCTCTACTCCTCAACACTGCACAGAAAGACAGACTGGTCAATGGGTCCCATGAGTCTACTACAAGAGTGTGTGTTGGAATTATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGGTGAGAAATTTTGATACCTCACCGGGAATGCATCACTaGTGCAGCCAGCAGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: IFNNLGQESERVRNFDTSPGMHH*CSQQDR Trigger: TCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGG...TGAGGTATCAAAATTTCTCACCCTTTCACTTTCCTGACCCAGATTGTTGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGGTGAGAAATTTTGATACCTCAGGCAGGACTTGGAGTTaGGAGGGGAATGAAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: IFNNLGQESERVRNFDTSGRTWS*EGNEGA Trigger: AGCACCTTCATTCCCCTCCCAACTCCAAGTCCTGCC...TGAGGTATCAAAATTTCTCACCCTTTCACTTTCCTGACCCAGATTGTTGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
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| 3UTR-3UTR CCA 90 bp | ATGACAGTGGTACTGCAAGGGACTGCCTCACTGTTCATTTATTTATTTTTGGTTTTCTGGGCACCTTCCTaGTGGATGTTAGAGATGCTG | + |
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Preference number: 2 (lower is better) Translates to: MTVVLQGTASLFIYLFLVFWAPS*WMLEML Trigger: CAGCATCTCTAACATCCACCAGGAAGGTGCCCAGAA...AACCAAAAATAAATAAATGAACAGTGAGGCAGTCCCTTGCAGTACCACTGTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGAATAGGTCAATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGGTGAGAAATAAACTGTTTCTGTaGCTCTTGGAGAAGAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: ALNRSIFNNLGQESERVRNKLFL*LLEKKG Trigger: CCCCTTCTTCTCCAAGAGCCACAGAAACAGTTTATT...TCTCACCCTTTCACTTTCCTGACCCAGATTGTTGAAAATTGACCTATTCAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098666.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGCAGTGTTGAGGAGTAGAGACCCATACTGGATTTCACAGTTGTGTCTCTTCGTTCAAGGCCAACTTTaGTTACATAGTTCAAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: CAVLRSRDPYWISQLCLFVQGQL*LHSSKV Trigger: AACCTTTGAACTATGTAACCAAAGTTGGCCTTGAAC...GAAGAGACACAACTGTGAAATCCAGTATGGGTCTCTACTCCTCAACACTGCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
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| 3UTR-3UTR CCA 90 bp | ATGACAGTGGTACTGCAAGGGACTGCCTCACTGTTCATTTATTTATTTTTGGTTTGTGAGTGGATTTTCTaGAGAAAGGCTCAGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: MTVVLQGTASLFIYLFLVCEWIF*RKAQRR Trigger: CCTTCTCTGAGCCTTTCTCCAGAAAATCCACTCACA...AACCAAAAATAAATAAATGAACAGTGAGGCAGTCCCTTGCAGTACCACTGTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
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| 3UTR-3UTR CCA 90 bp | TCGCATACTGAGAGGCAATTCAGTAGCTACAATTTTCAAATAGTGGATTGTCTCTCTAGTTGCTGTGAGTaGATTTTCTGGAGAAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SHTERQFSSYNFQIVDCLSSCCE*IFWRKA Trigger: AGCCTTTCTCCAGAAAATCCACTCACAGCAACTAGA...GAGACAATCCACTATTTGAAAATTGTAGCTACTGAATTGCCTCTCAGTATGCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
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| 3UTR CCA 72 bp | AGTGCAGGGCAGACAGAATGTCCAGGTAGCCAGGCCTaGTGGCCAGGGCTGCAGTCTGAGCAGGTGGGGTGC | + |
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Preference number: 3 (lower is better) Translates to: SAGQTECPGSQA*WPGLQSEQVGC Trigger: GCACCCCACCTGCTCAGACTGCAGCCCTGGCCACCAGGCCTGGCTACCTGGACATTCTGTCTGCCCTGCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098666.9 |
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| 3UTR CCA 72 bp | CCTCTCCTCCTGCTGCTGCACTCATCCCTGGTGCCCTaGTGGGGAAGGCAGGATTCAAGGCTACAGAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: PLLLLLHSSLVP*WGRQDSRLQKG Trigger: GCCTTTCTGTAGCCTTGAATCCTGCCTTCCCCACCAGGGCACCAGGGATGAGTGCAGCAGCAGGAGGAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098666.9 |
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| 3UTR-3UTR CAA 90 bp | CGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTTGTGGTGTTGGTGACTaGGAGGAAGGGCTGAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: RECITGAASRTDGQIMLTCGVGD*EEGLSH Trigger: GTGACTCAGCCCTTCCTCCAAGTCACCAACACCACA...AGTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
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| 3UTR CCA 72 bp | CCCTCCAGTGAGGAACAGAATCCGGGAATGCATCACTaGTGCAGCCAGCAGGACAGACGGACAGATTATGCT | + |
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Preference number: 3 (lower is better) Translates to: PSSEEQNPGMHH*CSQQDRRTDYA Trigger: AGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| 3UTR GCA 72 bp | TCCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTaGAGCCAGCAGGACAGACGGACAGATTATGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: SSEEQNPGMHHW*SQQDRRTDYAH Trigger: GTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| 3UTR CCA 72 bp | GGAGAAGAAGGGGCTGAAGTTGGCCGGTTGGGTTGCTaGGAATTGAAGTTCAGGACAGTGTATGCGACGTCA | + |
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Preference number: 3 (lower is better) Translates to: GEEGAEVGRLGC*ELKFRTVYATS Trigger: TGACGTCGCATACACTGTCCTGAACTTCAATTCCCAGCAACCCAACCGGCCAACTTCAGCCCCTTCTTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000206583.2 ENSMUST00000206687.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGGTTGCTGGGAATTGAAGTTCAGGACAGTGTATGCGACGTCATCCACCTTGTCTTTGACTGTGGTGTaGGTGACTTGGAGGAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: LGCWELKFRTVYATSSTLSLTVV*VTWRKG Trigger: GCCCTTCCTCCAAGTCACCAACACCACAGTCAAAGA...CAAGGTGGATGACGTCGCATACACTGTCCTGAACTTCAATTCCCAGCAACCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
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| 3UTR TCA 72 bp | CACAACTCCAATCACGATGCCAGCAATGGCGCCATCTaGGAGGCCTCCTTGTGTTGGGTCAAATATTATGTC | + |
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Preference number: 3 (lower is better) Translates to: HNSNHDASNGAI*EASLCWVKYYV Trigger: GACATAATATTTGACCCAACACAAGGAGGCCTCTCAGATGGCGCCATTGCTGGCATCGTGATTGGAGTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
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| 3UTR TCA 72 bp | CTGTTGTTCTGGGAGAGTGTCATTCTCTCTGTGAGCTaGAGACTCTGGCTATTGAAGAGCCACTGGATGTTG | + |
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Preference number: 3 (lower is better) Translates to: LLFWESVILSVS*RLWLLKSHWML Trigger: CAACATCCAGTGGCTCTTCAATAGCCAGAGTCTTCAGCTCACAGAGAGAATGACACTCTCCCAGAACAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
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| 3UTR GCA 72 bp | AGATGGGTAAGCATGACAGTTGTCGGGTGTGTAGATTaGCCATGGAGGTTTGATCTTCTCATGTATGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: RWVSMTVVGCVD*PWRFDLLMYGG Trigger: GCCACCATACATGAGAAGATCAAACCTCCATGGGCAATCTACACACCCGACAACTGTCATGCTTACCCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
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| 3UTR CCA 72 bp | GTAAGCATGACAGTTGTCGGGTGTGTAGATTGCCCATaGAGGTTTGATCTTCTCATGTATGGTGGCTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: VSMTVVGCVDCP*RFDLLMYGGFQ Trigger: TTGGAAGCCACCATACATGAGAAGATCAAACCTCCATGGGCAATCTACACACCCGACAACTGTCATGCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
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| 3UTR CCA 72 bp | GAAGCTGGAGATCTCAGAGGAAGAGTGTCCAGGCTCTaGCCAGTATCTGAAAGACAAGATAAAGAGATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: EAGDLRGRVSRL*PVSERQDKEME Trigger: TTCCATCTCTTTATCTTGTCTTTCAGATACTGGCCAGAGCCTGGACACTCTTCCTCTGAGATCTCCAGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
||
| 3UTR TCA 72 bp | TCCTTGTGTTGGGTCAAATATTATGTCCAGCTTGATTaGGTTGCTCCTCCTGACGCTGACTGGATTCGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SLCWVKYYVQLD*VAPPDADWIRD Trigger: ATCTCGAATCCAGTCAGCGTCAGGAGGAGCAACTCAATCAAGCTGGACATAATATTTGACCCAACACAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
||
| 3UTR CCA 72 bp | GTTTGGCGTAAGCACTTAGGTGACCTCCAAGGTTTATaGAAATTCAAGTCAGACTCTGATAGGGCAGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: VWRKHLGDLQGL*KFKSDSDRAGL Trigger: AAGTCCTGCCCTATCAGAGTCTGACTTGAATTTCCATAAACCTTGGAGGTCACCTAAGTGCTTACGCCAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
||
| 3UTR CCA 72 bp | CACAGTTGTGTCTCTTCAAGAATACTTTTCTCAGCTTaGTGTGGTAGCACACACTTGTCATCCCAGCACATG | + |
|
Preference number: 3 (lower is better) Translates to: HSCVSSRILFSA*CGSTHLSSQHM Trigger: CATGTGCTGGGATGACAAGTGTGTGCTACCACACCAAGCTGAGAAAAGTATTCTTGAAGAGACACAACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| 3UTR CCA 72 bp | GAGATAATTCCAACACACACTCTTGTAGTAGACTCATaGGACCCATTGACCAGTCTGTCTTTCTGTGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: EIIPTHTLVVDS*DPLTSLSFCAV Trigger: CACTGCACAGAAAGACAGACTGGTCAATGGGTCCCATGAGTCTACTACAAGAGTGTGTGTTGGAATTATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| 3UTR CCA 72 bp | GTGCTGGGTTTCCAGAAACCTAGCTGGGTCCCTCTTTaGTGGGGATGTGGAAAGCTTGTTATTATTTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: VLGFQKPSWVPL*WGCGKLVIILF Trigger: AAATAAAATAATAACAAGCTTTCCACATCCCCACCAAAGAGGGACCCAGCTAGGTTTCTGGAAACCCAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098666.9 |
||
| 3UTR CCA 72 bp | GGAGAACTAATTAATTCTCTCCAAAGCCTGTTGGCTTaGCGTGAGACCAAACACTTGATATCCAATACAACC | + |
|
Preference number: 3 (lower is better) Translates to: GELINSLQSLLA*RETKHLISNTT Trigger: GGTTGTATTGGATATCAAGTGTTTGGTCTCACGCCAAGCCAACAGGCTTTGGAGAGAATTAATTAGTTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098666.9 |
||
| 3UTR CCA 72 bp | TCTTTCTGTGCAGTGTTGAGGAGTAGAGACCCATACTaGATTTCACAGTTGTGTCTCTTCAAGAATACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SFCAVLRSRDPY*ISQLCLFKNTF Trigger: AAAAGTATTCTTGAAGAGACACAACTGTGAAATCCAGTATGGGTCTCTACTCCTCAACACTGCACAGAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACACTTGGAGGAAGGGCTaGGTCACTGGCTGGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PVRNRIRECITGAASRTDTWRKG*VTGWCT Trigger: TGTACACCAGCCAGTGACTCAGCCCTTCCTCCAAGT...GTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098668.3 ENSMUST00000205308.2 ENSMUST00000206687.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGAACTTGGAGGAAGGGCTaGGTCACTGGCTGGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VRNRIRECITGAASRTDGTWRKG*VTGWCT Trigger: TGTACACCAGCCAGTGACTCAGCCCTTCCTCCAAGT...TCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098668.3 ENSMUST00000205308.2 ENSMUST00000206687.2 |
||
| CDS-3UTR GCA 90 bp | GCGCGCATGTGTACGTGTGTGTGTGTGCTGAGACCCTCCAGTGAGGAACAGAATCCTCCCCAGGGAACCTaGCCTTTGTGGAGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARMCTCVCVLRPSSEEQNPPQGT*PLWRCA Trigger: AGCACATCTCCACAAAGGGCAGGTTCCCTGGGGAGG...ATTCTGTTCCTCACTGGAGGGTCTCAGCACACACACACACGTACACATGCGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGCTGAGACCCTCCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCTCACGATGCCAGCAATaGCGCCATCTGAGAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CVLRPSSEEQNPGMHHWCSRCQQ*RHLRGL Trigger: GAGGCCTCTCAGATGGCGCCATTGCTGGCATCGTGA...GCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGAGGGTCTCAGCACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000206687.2 |
||
| 3UTR CAA 72 bp | TCAGAAGGAGCCAGATTGTGGTTGGAGGCTGAGGGTTaGTGCTCTGTGAGATCTCGCTGGTCACTTCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SEGARLWLEAEG*CSVRSRWSLPP Trigger: CGGGGGAAGTGACCAGCGAGATCTCACAGAGCACAAACCCTCAGCCTCCAACCACAATCTGGCTCCTTCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
||
| CDS-3UTR GCA 90 bp | AATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCCTCCCCAGGGAACCTaGCCTTTGTGGAGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NPGMHHWCSQQDRRTDYAPPQGT*PLWRCA Trigger: AGCACATCTCCACAAAGGGCAGGTTCCCTGGGGAGG...AGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGCAACTCCAATCACGATaGCAGCAATGGCGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEEQNPGMHHWCSQQDRRQLQSR*QQWRHL Trigger: CAGATGGCGCCATTGCTGGCATCGTGATTGGAGTTG...CCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000206687.2 |
||
| CDS-3UTR GCA 90 bp | AGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGCAACTCCAATCACGATaGCAGCAATGGCGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNRIRECITGAASRTDGQQLQSR*QQWRHL Trigger: CAGATGGCGCCATTGCTGGCATCGTGATTGGAGTTG...CTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000206687.2 |
||
| 3UTR CAA 72 bp | GAAGGGGCTGAAGTTGGCCGGTTGGGTTGCTGGGAATaGAAGTTCAGGACAGTGTATGCGACGTCATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: EGAEVGRLGCWE*KFRTVYATSST Trigger: GGTGGATGACGTCGCATACACTGTCCTGAACTTCAATTCCCAGCAACCCAACCGGCCAACTTCAGCCCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000206583.2 ENSMUST00000206687.2 |
||
| CDS-3UTR TCA 90 bp | AGACCCTCCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGAAGACTCTGGCTATTaGAGAGCCACTGGATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPSSEEQNPGMHHWCSQQEDSGY*RATGCW Trigger: CCAACATCCAGTGGCTCTTCAATAGCCAGAGTCTTC...CTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGAGGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | CCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACCCTCCTGACGCTGACTaGATTCGAGATTTCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: PGMHHWCSQQDRRTDYAHPPDAD*IRDFTL Trigger: CAGTGTGAAATCTCGAATCCAGTCAGCGTCAGGAGG...GTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGCCTCCTGACGCTGACTaGATTCGAGATTTCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: SEEQNPGMHHWCSQQDRRPPDAD*IRDFTL Trigger: CAGTGTGAAATCTCGAATCCAGTCAGCGTCAGGAGG...CCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR TCA 90 bp | CCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACGTGTCATTCTCTCTGTaGGCTGAAGACTCTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PGMHHWCSQQDRRTDYAHVSFSL*AEDSGY Trigger: ATAGCCAGAGTCTTCAGCTCACAGAGAGAATGACAC...GTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACAGAGCCACTGGATGTTaGCTCCAATGTCATTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: PVRNRIRECITGAASRTDRATGC*LQCHST Trigger: TGTCGAATGACATTGGAGCCAACATCCAGTGGCTCT...GTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCTCTTGGAGAAGAAGGGGCTGAAGTTGGCCGGTTGGGTTGCTGGGAATTGAGAGCCACTGGATGTTaGCTCCAATGTCATTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: VALGEEGAEVGRLGCWELRATGC*LQCHST Trigger: TGTCGAATGACATTGGAGCCAACATCCAGTGGCTCT...CAATTCCCAGCAACCCAACCGGCCAACTTCAGCCCCTTCTTCTCCAAGAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | GAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCCCTCCTGACGCTGACTaGATTCGAGATTTCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: ESGNASLVQPAGQTDRLCPPDAD*IRDFTL Trigger: CAGTGTGAAATCTCGAATCCAGTCAGCGTCAGGAGG...GCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | GAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCCCCCGCCAGACTTCCTaGAATAGAGGAAATATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESGNASLVQPAGQTDRLCPRQTS*NRGNMP Trigger: TGGCATATTTCCTCTATTCCAGGAAGTCTGGCGGGG...GCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098668.3 ENSMUST00000098669.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGCTGAGACCCTCCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCCCCCGCCAGACTTCCTaGAATAGAGGAAATATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVLRPSSEEQNPGMHHWCPRQTS*NRGNMP Trigger: TGGCATATTTCCTCTATTCCAGGAAGTCTGGCGGGG...GCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGAGGGTCTCAGCACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098668.3 ENSMUST00000098669.8 |
||
| 3UTR CAA 72 bp | GTGGCTCTTGGAGAAGAAGGGGCTGAAGTTGGCCGGTaGGGTTGCTGGGAATTGAAGTTCAGGACAGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VALGEEGAEVGR*GCWELKFRTVY Trigger: ATACACTGTCCTGAACTTCAATTCCCAGCAACCCAACCGGCCAACTTCAGCCCCTTCTTCTCCAAGAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000206583.2 ENSMUST00000206687.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTGCTGAGACCCTCCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCGTGTCATTCTCTCTGTaGGCTGAAGACTCTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: CVLRPSSEEQNPGMHHWCVSFSL*AEDSGY Trigger: ATAGCCAGAGTCTTCAGCTCACAGAGAGAATGACAC...GCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGAGGGTCTCAGCACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGAGTGTCATTCTCTCTGTaGGCTGAAGACTCTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSEEQNPGMHHWCSQQDRVSFSL*AEDSGY Trigger: ATAGCCAGAGTCTTCAGCTCACAGAGAGAATGACAC...TCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR GCA 90 bp | ATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCTGTATATTATCTCTCTaGCGCTGTATGCTTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: IRECITGAASRTDGQIMLCILSL*RCMLAP Trigger: CGGGGCAAGCATACAGCGGCAGAGAGATAATATACA...GAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGATGTATATTATCTCTCTaGCGCTGTATGCTTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSEEQNPGMHHWCSQQDRCILSL*RCMLAP Trigger: CGGGGCAAGCATACAGCGGCAGAGAGATAATATACA...TCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | AGACCCTCCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGCTATTGAAGAGCCACTaGATGTTGGCTCCAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPSSEEQNPGMHHWCSQQLLKSH*MLAPMS Trigger: TGACATTGGAGCCAACATCCAGTGGCTCTTCAATAG...CTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGAGGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | CAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATCCTCCTGACGCTGACTaGATTCGAGATTTCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: QNPGMHHWCSQQDRRTDYPPDAD*IRDFTL Trigger: CAGTGTGAAATCTCGAATCCAGTCAGCGTCAGGAGG...ATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR TCA 90 bp | CAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGTGTCATTCTCTCTGTaGGCTGAAGACTCTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: QNPGMHHWCSQQDRRTDYVSFSL*AEDSGY Trigger: ATAGCCAGAGTCTTCAGCTCACAGAGAGAATGACAC...ATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR GCA 90 bp | AATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTTGTATATTATCTCTCTaGCGCTGTATGCTTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NPGMHHWCSQQDRRTDYACILSL*RCMLAP Trigger: CGGGGCAAGCATACAGCGGCAGAGAGATAATATACA...AGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | AATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTAGAGCCACTGGATGTTaGCTCCAATGTCATTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: NPGMHHWCSQQDRRTDYARATGC*LQCHST Trigger: TGTCGAATGACATTGGAGCCAACATCCAGTGGCTCT...AGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACTATTGAAGAGCCACTaGATGTTGGCTCCAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSEEQNPGMHHWCSQQDRLLKSH*MLAPMS Trigger: TGACATTGGAGCCAACATCCAGTGGCTCTTCAATAG...TCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | CGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTCTATTGAAGAGCCACTaGATGTTGGCTCCAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RECITGAASRTDGQIMLTLLKSH*MLAPMS Trigger: TGACATTGGAGCCAACATCCAGTGGCTCTTCAATAG...AGTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | GCGCGCATGTGTACGTGTGTGTGTGTGCTGAGACCCTCCAGTGAGGAACAGAATGAGGCCTCCTTGTGTTaGGTCAAATATTATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARMCTCVCVLRPSSEEQNEASLC*VKYYVQ Trigger: CTGGACATAATATTTGACCCAACACAAGGAGGCCTC...ATTCTGTTCCTCACTGGAGGGTCTCAGCACACACACACACGTACACATGCGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGTTGCTGGGAATTGAAGTTCAGGACAGTGTATGCGACGTCATCCACCTTGGAAGACTCTGGCTATTaGAGAGCCACTGGATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGCWELKFRTVYATSSTLEDSGY*RATGCW Trigger: CCAACATCCAGTGGCTCTTCAATAGCCAGAGTCTTC...CAAGGTGGATGACGTCGCATACACTGTCCTGAACTTCAATTCCCAGCAACCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000206687.2 |
||
| CDS-3UTR GCA 90 bp | GCTAAGGCAAGTGTATGGCCACAGTTCAAGGCCAACTTTGGTTACATAGTTCAACCTCCCCAGGGAACCTaGCCTTTGTGGAGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AKASVWPQFKANFGYIVQPPQGT*PLWRCA Trigger: AGCACATCTCCACAAAGGGCAGGTTCCCTGGGGAGG...TTGAACTATGTAACCAAAGTTGGCCTTGAACTGTGGCCATACACTTGCCTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| CDS-3UTR GCA 90 bp | GAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTTCTTGTATATTATCTCTCTaGCGCTGTATGCTTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ECITGAASRTDGQIMLTSCILSL*RCMLAP Trigger: CGGGGCAAGCATACAGCGGCAGAGAGATAATATACA...AGAAGTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGATTCATGGTGATCATTTaGAAGAGCAGGGATCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SSEEQNPGMHHWCSQQDRFMVII*KSRDPL Trigger: CAATGGATCCCTGCTCTTCCAAATGATCACCATGAA...TCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | GAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTTCATGGTGATCATTTaGAAGAGCAGGGATCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ESGNASLVQPAGQTDRLCFMVII*KSRDPL Trigger: CAATGGATCCCTGCTCTTCCAAATGATCACCATGAA...GCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | AATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCTATTGAAGAGCCACTaGATGTTGGCTCCAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NPGMHHWCSQQDRRTDYALLKSH*MLAPMS Trigger: TGACATTGGAGCCAACATCCAGTGGCTCTTCAATAG...AGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTGAATAGGTCAATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGGTGAGACCTCCCCAGGGAACCTaGCCTTTGTGGAGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALNRSIFNNLGQESERVRPPQGT*PLWRCA Trigger: AGCACATCTCCACAAAGGGCAGGTTCCCTGGGGAGG...TCTCACCCTTTCACTTTCCTGACCCAGATTGTTGAAAATTGACCTATTCAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
||
| CDS-3UTR CCA 90 bp | AATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTTCTTAGAGCCACTGGATGTTaGCTCCAATGTCATTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: NASLVQPAGQTDRLCSLLRATGC*LQCHST Trigger: TGTCGAATGACATTGGAGCCAACATCCAGTGGCTCT...AAGAAGTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGAATAGGTCAATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGGTGAGATCACGATGCCAGCAATaGCGCCATCTGAGAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALNRSIFNNLGQESERVRSRCQQ*RHLRGL Trigger: GAGGCCTCTCAGATGGCGCCATTGCTGGCATCGTGA...TCTCACCCTTTCACTTTCCTGACCCAGATTGTTGAAAATTGACCTATTCAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGTGCTCTGAATAGGTCAATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGTCACGATGCCAGCAATaGCGCCATCTGAGAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGALNRSIFNNLGQESERSRCQQ*RHLRGL Trigger: GAGGCCTCTCAGATGGCGCCATTGCTGGCATCGTGA...CCTTTCACTTTCCTGACCCAGATTGTTGAAAATTGACCTATTCAGAGCACCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
||
| CDS-3UTR CCA 90 bp | GAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTTCTATCCGCCAGACTTCCTaGAATAGAGGAAATATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ECITGAASRTDGQIMLTSIRQTS*NRGNMP Trigger: TGGCATATTTCCTCTATTCCAGGAAGTCTGGCGGAT...AGAAGTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000206687.2 |
||
| 3UTR CAA 72 bp | CCAACACACACTCTTGTAGTAGACTCATGGGACCCATaGACCAGTCTGTCTTTCTGTGCAGTGTTGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PTHTLVVDSWDP*TSLSFCAVLRS Trigger: ACTCCTCAACACTGCACAGAAAGACAGACTGGTCAATGGGTCCCATGAGTCTACTACAAGAGTGTGTGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| 3UTR CAA 72 bp | AGGCCTCCTTGTGTTGGGTCAAATATTATGTCCAGCTaGATTGAGTTGCTCCTCCTGACGCTGACTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: RPPCVGSNIMSS*IELLLLTLTGF Trigger: GAATCCAGTCAGCGTCAGGAGGAGCAACTCAATCAAGCTGGACATAATATTTGACCCAACACAAGGAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
||
| 3UTR CAA 72 bp | TTGAAGTTCAGGACAGTGTATGCGACGTCATCCACCTaGTTAGGAGAGTTGTCAGAAGGAGCCAGATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKFRTVYATSST*LGELSEGARLW Trigger: CCACAATCTGGCTCCTTCTGACAACTCTCCTAACAAGGTGGATGACGTCGCATACACTGTCCTGAACTTCAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTGGAGTTGCTGACAAAGAGCCTCTCTAGTTGCTGTGAGTGGATTTTCTGGGTGTCATTCTCTCTGTaGGCTGAAGACTCTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: CLELLTKSLSSCCEWIFWVSFSL*AEDSGY Trigger: ATAGCCAGAGTCTTCAGCTCACAGAGAGAATGACAC...CCAGAAAATCCACTCACAGCAACTAGAGAGGCTCTTTGTCAGCAACTCCAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTGGAGTTGCTGACAAAGAGCCTCTCTAGTTGCTGTGAGTGGATTTTCTGGTGTATATTATCTCTCTaGCGCTGTATGCTTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CLELLTKSLSSCCEWIFWCILSL*RCMLAP Trigger: CGGGGCAAGCATACAGCGGCAGAGAGATAATATACA...CCAGAAAATCCACTCACAGCAACTAGAGAGGCTCTTTGTCAGCAACTCCAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGTGACCTCCAAGGTTTATGGAAATTCAAGTCAGACTCTGATAGGGCAGGACAACTCCAATCACGATaGCAGCAATGGCGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGDLQGLWKFKSDSDRAGQLQSR*QQWRHL Trigger: CAGATGGCGCCATTGCTGGCATCGTGATTGGAGTTG...TCCTGCCCTATCAGAGTCTGACTTGAATTTCCATAAACCTTGGAGGTCACCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
||
| CDS-3UTR GCA 90 bp | TGTATGGCCACAGTTCAAGGCCAACTTTGGTTACATAGTTCAAAGGTTGCCAAGCAACTCCAATCACGATaGCAGCAATGGCGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: CMATVQGQLWLHSSKVAKQLQSR*QQWRHL Trigger: CAGATGGCGCCATTGCTGGCATCGTGATTGGAGTTG...CTTGGCAACCTTTGAACTATGTAACCAAAGTTGGCCTTGAACTGTGGCCATACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| CDS-3UTR GCA 90 bp | AATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTGGCTTTCACCATTTCTaGTCCACAGGTAGTTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: NPGMHHWCSQQDRRTDYAGFHHF*STGSLY Trigger: ATATAAACTACCTGTGGAGCAGAAATGGTGAAAGCC...AGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000206583.2 ENSMUST00000206676.2 |
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| CDS-3UTR CCA 90 bp | GGAATTGAAGTTCAGGACAGTGTATGCGACGTCATCCACCTTGTTAGGAGAGTTCCTCCTGACGCTGACTaGATTCGAGATTTCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: GIEVQDSVCDVIHLVRRVPPDAD*IRDFTL Trigger: CAGTGTGAAATCTCGAATCCAGTCAGCGTCAGGAGG...AACTCTCCTAACAAGGTGGATGACGTCGCATACACTGTCCTGAACTTCAATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000206687.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGATTTCACAGTTGTGTCTCTTCAAGAATACTTTTCTCAGCTTGGTGTGGTTCACGATGCCAGCAATaGCGCCATCTGAGAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGFHSCVSSRILFSAWCGSRCQQ*RHLRGL Trigger: GAGGCCTCTCAGATGGCGCCATTGCTGGCATCGTGA...ACCACACCAAGCTGAGAAAAGTATTCTTGAAGAGACACAACTGTGAAATCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| CDS-3UTR CCA 90 bp | CGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTTGGGCTTTAATAATATaGGGTGTACATGAAATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RECITGAASRTDGQIMLTWALII*GVHEIA Trigger: TGCGATTTCATGTACACCCCATATTATTAAAGCCCA...AGTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000206583.2 ENSMUST00000206676.2 |
||
| CDS-3UTR CCA 90 bp | GCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTTCTTTTTTTCATGGTGATCATTTaGAAGAGCAGGGATCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ASLVQPAGQTDRLCSLLFFMVII*KSRDPL Trigger: CAATGGATCCCTGCTCTTCCAAATGATCACCATGAA...AAAAAGAAGTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGC 47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| CDS-3UTR CCA 90 bp | GCCAACTTTGGTTACATAGTTCAAAGGTTGCCAAGGCTGCATGGTGAGATCCTTAGAGCCACTGGATGTTaGCTCCAATGTCATTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: ANFGYIVQRLPRLHGEILRATGC*LQCHST Trigger: TGTCGAATGACATTGGAGCCAACATCCAGTGGCTCT...AAGGATCTCACCATGCAGCCTTGGCAACCTTTGAACTATGTAACCAAAGTTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAATTGAAGTTCAGGACAGTGTATGCGACGTCATCCACCTTGTTAGGAGAGGAGGCCTCCTTGTGTTaGGTCAAATATTATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WELKFRTVYATSSTLLGEEASLC*VKYYVQ Trigger: CTGGACATAATATTTGACCCAACACAAGGAGGCCTC...CTCTCCTAACAAGGTGGATGACGTCGCATACACTGTCCTGAACTTCAATTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000206687.2 |
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| CDS-3UTR TCA 90 bp | AGTGTATGGCCACAGTTCAAGGCCAACTTTGGTTACATAGTTCAAAGGTTGCCAGTGTCATTCTCTCTGTaGGCTGAAGACTCTGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SVWPQFKANFGYIVQRLPVSFSL*AEDSGY Trigger: ATAGCCAGAGTCTTCAGCTCACAGAGAGAATGACAC...TGGCAACCTTTGAACTATGTAACCAAAGTTGGCCTTGAACTGTGGCCATACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| CDS-3UTR GCA 90 bp | ATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGGTGAGAAATTTTGATACCTCACCTCCCCAGGGAACCTaGCCTTTGTGGAGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IFNNLGQESERVRNFDTSPPQGT*PLWRCA Trigger: AGCACATCTCCACAAAGGGCAGGTTCCCTGGGGAGG...TGAGGTATCAAAATTTCTCACCCTTTCACTTTCCTGACCCAGATTGTTGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
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| CDS-3UTR GCA 90 bp | CTGGGAGAGTGTCATTCTCTCTGTGAGCTGAAGACTCTGGCTATTGAAGAGCCAGGCTTTCACCATTTCTaGTCCACAGGTAGTTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: LGECHSLCELKTLAIEEPGFHHF*STGSLY Trigger: ATATAAACTACCTGTGGAGCAGAAATGGTGAAAGCC...TGGCTCTTCAATAGCCAGAGTCTTCAGCTCACAGAGAGAATGACACTCTCCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
||
| CDS-3UTR CCA 90 bp | AATTTTGATACCTCACTCTCAGCCAAATTTGAAAGCCTAGAAGGGTTGAGTTTTTCACGATGCCAGCAATaGCGCCATCTGAGAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NFDTSLSAKFESLEGLSFSRCQQ*RHLRGL Trigger: GAGGCCTCTCAGATGGCGCCATTGCTGGCATCGTGA...AAAACTCAACCCTTCTAGGCTTTCAAATTTGGCTGAGAGTGAGGTATCAAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
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| CDS-3UTR CCA 90 bp | CTTCAAGAATACTTTTCTCAGCTTGGTGTGGTAGCACACACTTGTCATCCCAGCATCCGCCAGACTTCCTaGAATAGAGGAAATATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQEYFSQLGVVAHTCHPSIRQTS*NRGNMP Trigger: TGGCATATTTCCTCTATTCCAGGAAGTCTGGCGGAT...GCTGGGATGACAAGTGTGTGCTACCACACCAAGCTGAGAAAAGTATTCTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| 3UTR CAA 72 bp | CAGTTCAAGGCCAACTTTGGTTACATAGTTCAAAGGTaGCCAAGGCTGCATGGTGAGATCCTTGTTAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QFKANFGYIVQR*PRLHGEILVRR Trigger: TCTCCTAACAAGGATCTCACCATGCAGCCTTGGCAACCTTTGAACTATGTAACCAAAGTTGGCCTTGAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCAATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGGTGAGAAATTTTGATACTTGGAGGAAGGGCTaGGTCACTGGCTGGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RSIFNNLGQESERVRNFDTWRKG*VTGWCT Trigger: TGTACACCAGCCAGTGACTCAGCCCTTCCTCCAAGT...ATCAAAATTTCTCACCCTTTCACTTTCCTGACCCAGATTGTTGAAAATTGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098668.3 |
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| CDS-3UTR CCA 90 bp | GAAGGTGCTCTGAATAGGTCAATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGAGAGCCACTGGATGTTaGCTCCAATGTCATTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: EGALNRSIFNNLGQESERRATGC*LQCHST Trigger: TGTCGAATGACATTGGAGCCAACATCCAGTGGCTCT...CCTTTCACTTTCCTGACCCAGATTGTTGAAAATTGACCTATTCAGAGCACCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
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| CDS-3UTR CCA 90 bp | TTAGGTGACCTCCAAGGTTTATGGAAATTCAAGTCAGACTCTGATAGGGCAGGACTATTGAAGAGCCACTaGATGTTGGCTCCAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGDLQGLWKFKSDSDRAGLLKSH*MLAPMS Trigger: TGACATTGGAGCCAACATCCAGTGGCTCTTCAATAG...TCCTGCCCTATCAGAGTCTGACTTGAATTTCCATAAACCTTGGAGGTCACCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
||
| CDS-3UTR CCA 90 bp | GACCCATACTGGATTTCACAGTTGTGTCTCTTCAAGAATACTTTTCTCAGCTTGCCTCCTGACGCTGACTaGATTCGAGATTTCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: DPYWISQLCLFKNTFLSLPPDAD*IRDFTL Trigger: CAGTGTGAAATCTCGAATCCAGTCAGCGTCAGGAGG...CAAGCTGAGAAAAGTATTCTTGAAGAGACACAACTGTGAAATCCAGTATGGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| CDS-3UTR CCA 90 bp | GCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTTCTTTTTTGGGCTTTAATAATATaGGGTGTACATGAAATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASLVQPAGQTDRLCSLLFWALII*GVHEIA Trigger: TGCGATTTCATGTACACCCCATATTATTAAAGCCCA...AAAAAGAAGTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000206583.2 ENSMUST00000206676.2 |
||
| CDS-3UTR GCA 90 bp | AGAGACCCATACTGGATTTCACAGTTGTGTCTCTTCAAGAATACTTTTCTCAGCTGTATATTATCTCTCTaGCGCTGTATGCTTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RDPYWISQLCLFKNTFLSCILSL*RCMLAP Trigger: CGGGGCAAGCATACAGCGGCAGAGAGATAATATACA...GCTGAGAAAAGTATTCTTGAAGAGACACAACTGTGAAATCCAGTATGGGTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| CDS-3UTR GCA 90 bp | AATTTTGATACCTCACTCTCAGCCAAATTTGAAAGCCTAGAAGGGTTGAGTTTTCAACTCCAATCACGATaGCAGCAATGGCGCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: NFDTSLSAKFESLEGLSFQLQSR*QQWRHL Trigger: CAGATGGCGCCATTGCTGGCATCGTGATTGGAGTTG...AAAACTCAACCCTTCTAGGCTTTCAAATTTGGCTGAGAGTGAGGTATCAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
||
| CDS-3UTR CCA 90 bp | TTCACAGTTGTGTCTCTTCAAGAATACTTTTCTCAGCTTGGTGTGGTAGCACACCTATTGAAGAGCCACTaGATGTTGGCTCCAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FTVVSLQEYFSQLGVVAHLLKSH*MLAPMS Trigger: TGACATTGGAGCCAACATCCAGTGGCTCTTCAATAG...GTGTGCTACCACACCAAGCTGAGAAAAGTATTCTTGAAGAGACACAACTGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGAATAGGTCAATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGGTGAGAGAGGCCTCCTTGTGTTaGGTCAAATATTATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALNRSIFNNLGQESERVREASLC*VKYYVQ Trigger: CTGGACATAATATTTGACCCAACACAAGGAGGCCTC...TCTCACCCTTTCACTTTCCTGACCCAGATTGTTGAAAATTGACCTATTCAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGTGACCTCCAAGGTTTATGGAAATTCAAGTCAGACTCTGATAGGGCAGGAGGCTTTCACCATTTCTaGTCCACAGGTAGTTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: LGDLQGLWKFKSDSDRAGGFHHF*STGSLY Trigger: ATATAAACTACCTGTGGAGCAGAAATGGTGAAAGCC...TCCTGCCCTATCAGAGTCTGACTTGAATTTCCATAAACCTTGGAGGTCACCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
||
| CDS-3UTR CCA 90 bp | TTCACAGTTGTGTCTCTTCAAGAATACTTTTCTCAGCTTGGTGTGGTAGCACACTTCATGGTGATCATTTaGAAGAGCAGGGATCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: FTVVSLQEYFSQLGVVAHFMVII*KSRDPL Trigger: CAATGGATCCCTGCTCTTCCAAATGATCACCATGAA...GTGTGCTACCACACCAAGCTGAGAAAAGTATTCTTGAAGAGACACAACTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCAATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGGTGAGAAATTTTGATCCTCCTGACGCTGACTaGATTCGAGATTTCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: RSIFNNLGQESERVRNFDPPDAD*IRDFTL Trigger: CAGTGTGAAATCTCGAATCCAGTCAGCGTCAGGAGG...ATCAAAATTTCTCACCCTTTCACTTTCCTGACCCAGATTGTTGAAAATTGACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
||
| CDS-3UTR CCA 90 bp | ACCCATACTGGATTTCACAGTTGTGTCTCTTCAAGAATACTTTTCTCAGCTTGGGAGGCCTCCTTGTGTTaGGTCAAATATTATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: THTGFHSCVSSRILFSAWEASLC*VKYYVQ Trigger: CTGGACATAATATTTGACCCAACACAAGGAGGCCTC...CCAAGCTGAGAAAAGTATTCTTGAAGAGACACAACTGTGAAATCCAGTATGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| CDS-3UTR CCA 90 bp | GGAATTGAAGTTCAGGACAGTGTATGCGACGTCATCCACCTTGTTAGGAGAGTTTGGGCTTTAATAATATaGGGTGTACATGAAATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GIEVQDSVCDVIHLVRRVWALII*GVHEIA Trigger: TGCGATTTCATGTACACCCCATATTATTAAAGCCCA...AACTCTCCTAACAAGGTGGATGACGTCGCATACACTGTCCTGAACTTCAATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000206583.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCAGTGTTGAGGAGTAGAGACCCATACTGGATTTCACAGTTGTGTCTCTTCTGGGCTTTAATAATATaGGGTGTACATGAAATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: CAVLRSRDPYWISQLCLFWALII*GVHEIA Trigger: TGCGATTTCATGTACACCCCATATTATTAAAGCCCA...GAAGAGACACAACTGTGAAATCCAGTATGGGTCTCTACTCCTCAACACTGCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCAAATAATTTCAACACTCTCCGAAGGTTAGCTCTGTGCTGCTTTTTCACAAGAGCCACTGGATGTTaGCTCCAATGTCATTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: FSNNFNTLRRLALCCFFTRATGC*LQCHST Trigger: TGTCGAATGACATTGGAGCCAACATCCAGTGGCTCT...TGTGAAAAAGCAGCACAGAGCTAACCTTCGGAGAGTGTTGAAATTATTTGAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
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| CDS-3UTR GCA 90 bp | GACCCATACTGGATTTCACAGTTGTGTCTCTTCAAGAATACTTTTCTCAGCTTGGGCTTTCACCATTTCTaGTCCACAGGTAGTTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: DPYWISQLCLFKNTFLSLGFHHF*STGSLY Trigger: ATATAAACTACCTGTGGAGCAGAAATGGTGAAAGCC...CAAGCTGAGAAAAGTATTCTTGAAGAGACACAACTGTGAAATCCAGTATGGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCAAATAATTTCAACACTCTCCGAAGGTTAGCTCTGTGCTGCTTTTTCACAATCCGCCAGACTTCCTaGAATAGAGGAAATATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSNNFNTLRRLALCCFFTIRQTS*NRGNMP Trigger: TGGCATATTTCCTCTATTCCAGGAAGTCTGGCGGAT...TGTGAAAAAGCAGCACAGAGCTAACCTTCGGAGAGTGTTGAAATTATTTGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098666.9 |
||
| CDS-3UTR GCA 90 bp | TCGCATACTGAGAGGCAATTCAGTAGCTACAATTTTCAAATAGTGGATTGTCTCGGCTTTCACCATTTCTaGTCCACAGGTAGTTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: SHTERQFSSYNFQIVDCLGFHHF*STGSLY Trigger: ATATAAACTACCTGTGGAGCAGAAATGGTGAAAGCC...GAGACAATCCACTATTTGAAAATTGTAGCTACTGAATTGCCTCTCAGTATGCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
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| CDS-3UTR CCA 90 bp | AGGTCAATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGGTGAGAAATTTTGATTTCATGGTGATCATTTaGAAGAGCAGGGATCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RSIFNNLGQESERVRNFDFMVII*KSRDPL Trigger: CAATGGATCCCTGCTCTTCCAAATGATCACCATGAA...ATCAAAATTTCTCACCCTTTCACTTTCCTGACCCAGATTGTTGAAAATTGACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
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| CDS-3UTR CCA 90 bp | ATGACAGTGGTACTGCAAGGGACTGCCTCACTGTTCATTTATTTATTTTTGGTTTGGGCTTTAATAATATaGGGTGTACATGAAATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: MTVVLQGTASLFIYLFLVWALII*GVHEIA Trigger: TGCGATTTCATGTACACCCCATATTATTAAAGCCCA...AACCAAAAATAAATAAATGAACAGTGAGGCAGTCCCTTGCAGTACCACTGTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
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| CDS-3UTR CAA 90 bp | AGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGTGTGGTGTTGGTGACTaGGAGGAAGGGCTGAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RNRIRECITGAASRTDGQCGVGD*EEGLSH Trigger: GTGACTCAGCCCTTCCTCCAAGTCACCAACACCACA...CTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGATGTGGTGTTGGTGACTaGGAGGAAGGGCTGAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSEEQNPGMHHWCSQQDRCGVGD*EEGLSH Trigger: GTGACTCAGCCCTTCCTCCAAGTCACCAACACCACA...TCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CAA 90 bp | CCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTCTTTGACTGTGGTGTaGGTGACTTGGAGGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGMHHWCSQQDRRTDYAHSLTVV*VTWRKG Trigger: GCCCTTCCTCCAAGTCACCAACACCACAGTCAAAGA...GTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CAA 90 bp | ATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCTCTTTGACTGTGGTGTaGGTGACTTGGAGGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IRECITGAASRTDGQIMLSLTVV*VTWRKG Trigger: GCCCTTCCTCCAAGTCACCAACACCACAGTCAAAGA...GAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CAA 90 bp | AGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGTCTTTGACTGTGGTGTaGGTGACTTGGAGGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RIRECITGAASRTDGQIMSLTVV*VTWRKG Trigger: GCCCTTCCTCCAAGTCACCAACACCACAGTCAAAGA...CATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| CDS-3UTR CAA 90 bp | GTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACTTCATGGTGATCATTaGGAAGAGCAGGGATCCATT | + |
|
Preference number: 5 (lower is better) Translates to: VRNRIRECITGAASRTDGLHGDH*EEQGSI Trigger: AATGGATCCCTGCTCTTCCAAATGATCACCATGAAG...TCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CAA 90 bp | TTGGGTTGCTGGGAATTGAAGTTCAGGACAGTGTATGCGACGTCATCCACCTTGTGTGGTGTTGGTGACTaGGAGGAAGGGCTGAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGCWELKFRTVYATSSTLCGVGD*EEGLSH Trigger: GTGACTCAGCCCTTCCTCCAAGTCACCAACACCACA...CAAGGTGGATGACGTCGCATACACTGTCCTGAACTTCAATTCCCAGCAACCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000206687.2 |
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| CDS-3UTR CAA 90 bp | CAGGGCTGCAGTCTGAGCAGGTGGGGTGCTGCAGAAGGTGTTACTGTGGGATTGAATATTATGTCCAGCTaGATTGAGTTGCTCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGCSLSRWGAAEGVTVGLNIMSS*IELLLL Trigger: CAGGAGGAGCAACTCAATCAAGCTGGACATAATATT...CAATCCCACAGTAACACCTTCTGCAGCACCCCACCTGCTCAGACTGCAGCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098666.9 |
||
| CDS-3UTR CAA 90 bp | AGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGCATATTATGTCCAGCTaGATTGAGTTGCTCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SEEQNPGMHHWCSQQDRRHIMSS*IELLLL Trigger: CAGGAGGAGCAACTCAATCAAGCTGGACATAATATG...CCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205308.2 ENSMUST00000206676.2 |
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| CDS GCA 90 bp | GAGTTGTCAGAAGGAGCCAGATTGTGGTTGGAGGCTGAGGGTTTGTaGTCTGTGAGATCTCGCTGGTCACTTCCCATATTATGTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ELSEGARLWLEAEGL*SVRSRWSLPILCPA Trigger: AGCTGGACATAATATGGGAAGTGACCAGCGAGATCTCACAGAGCACAAACCCTCAGCCTCCAACCACAATCTGGCTCCTTCTGACAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205308.2 ENSMUST00000206676.2 |
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| CDS-3UTR CAA 90 bp | AGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGACAAGTAGAAGAACATaGTTGTCTTCAGCAACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RNRIRECITGAASRTDGQTSRRT*LSSATW Trigger: CCAGGTTGCTGAAGACAACAATGTTCTTCTACTTGT...CTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| CDS-3UTR CAA 90 bp | CCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACACAAGTAGAAGAACATaGTTGTCTTCAGCAACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PVRNRIRECITGAASRTDTSRRT*LSSATW Trigger: CCAGGTTGCTGAAGACAACAATGTTCTTCTACTTGT...GTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| CDS-3UTR CAA 90 bp | GCTCTTGGAGAAGAAGGGGCTGAAGTTGGCCGGTTGGGTTGCTGGGAATTGAAGCTTCATGGTGATCATTaGGAAGAGCAGGGATCCATT | + |
|
Preference number: 5 (lower is better) Translates to: ALGEEGAEVGRLGCWELKLHGDH*EEQGSI Trigger: AATGGATCCCTGCTCTTCCAAATGATCACCATGAAG...CTTCAATTCCCAGCAACCCAACCGGCCAACTTCAGCCCCTTCTTCTCCAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| CDS-3UTR CAA 90 bp | AATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTTCTTTCTTTGACTGTGGTGTaGGTGACTTGGAGGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NASLVQPAGQTDRLCSLLSLTVV*VTWRKG Trigger: GCCCTTCCTCCAAGTCACCAACACCACAGTCAAAGA...AAGAAGTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGAATATTATGTCCAGCTaGATTGAGTTGCTCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SEEQNPGMHHWCSQQDRRNIMSS*IELLLL Trigger: CAGGAGGAGCAACTCAATCAAGCTGGACATAATATT...CCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000206687.2 |
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| CDS TCA 90 bp | CTTGTTAGGAGAGTTGTCAGAAGGAGCCAGATTGTGGTTGGAGGCTaGGGGTTTGTGCTCTGTGAGATCTCGCTGGTCACTTCCCATATT | + |
|
Preference number: 5 (lower is better) Translates to: LVRRVVRRSQIVVGG*GFVLCEISLVTSHI Trigger: AATATGGGAAGTGACCAGCGAGATCTCACAGAGCACAAACCCTCAGCCTCCAACCACAATCTGGCTCCTTCTGACAACTCTCCTAACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205308.2 ENSMUST00000206676.2 |
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| CDS CCA 90 bp | GGATATAATCGGGGTGTCCGGACCATAGATAATGTTCAGGCTGAATaGGTCACTTCGGTTGACACTCACTGGATTCCGGGTTTCACACAC | + |
|
Preference number: 5 (lower is better) Translates to: GYNRGVRTIDNVQAE*VTSVDTHWIPGFTH Trigger: GTGTGTGAAACCCGGAATCCAGTGAGTGTCAACCGAAGTGACCCATTCAGCCTGAACATTATCTATGGTCCGGACACCCCGATTATATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 ENSMUST00000206171.2 ENSMUST00000206676.2 |
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| CDS-3UTR CAA 90 bp | TCCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGAACAAGTAGAAGAACATaGTTGTCTTCAGCAACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSEEQNPGMHHWCSQQDRTSRRT*LSSATW Trigger: CCAGGTTGCTGAAGACAACAATGTTCTTCTACTTGT...TCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| CDS-3UTR CAA 90 bp | GCTCTTGGAGAAGAAGGGGCTGAAGTTGGCCGGTTGGGTTGCTGGGAATTGAAGACAAGTAGAAGAACATaGTTGTCTTCAGCAACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ALGEEGAEVGRLGCWELKTSRRT*LSSATW Trigger: CCAGGTTGCTGAAGACAACAATGTTCTTCTACTTGT...CTTCAATTCCCAGCAACCCAACCGGCCAACTTCAGCCCCTTCTTCTCCAAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| CDS-3UTR CAA 90 bp | AGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTTCATGGTGATCATTaGGAAGAGCAGGGATCCATT | + |
|
Preference number: 5 (lower is better) Translates to: RIRECITGAASRTDGQIMLHGDH*EEQGSI Trigger: AATGGATCCCTGCTCTTCCAAATGATCACCATGAAG...CATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| CDS-3UTR CAA 90 bp | TGTGCAGTGTTGAGGAGTAGAGACCCATACTGGATTTCACAGTTGTGTCTCTTCTGTGGTGTTGGTGACTaGGAGGAAGGGCTGAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CAVLRSRDPYWISQLCLFCGVGD*EEGLSH Trigger: GTGACTCAGCCCTTCCTCCAAGTCACCAACACCACA...GAAGAGACACAACTGTGAAATCCAGTATGGGTCTCTACTCCTCAACACTGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
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| CDS-3UTR CAA 90 bp | AGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGTTGTTGCTTGTGATGTaGGGCTTTAATAATATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RNRIRECITGAASRTDGQLLLVM*GFNNMG Trigger: CCCCATATTATTAAAGCCCAACATCACAAGCAACAA...CTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 ENSMUST00000206583.2 ENSMUST00000206676.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGAATCGTGCAATTTCTTaGTCTATAGCCGTAGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SEEQNPGMHHWCSQQDRRNRAIS*SIAVVF Trigger: AAACACTACGGCTATAGACAAAGAAATTGCACGATT...CCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| CDS-3UTR CAA 90 bp | AGGAACAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGAATCGTGCAATTTCTTaGTCTATAGCCGTAGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RNRIRECITGAASRTDGQNRAIS*SIAVVF Trigger: AAACACTACGGCTATAGACAAAGAAATTGCACGATT...CTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTGTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| CDS-3UTR CAA 90 bp | GTGGCTCTTGGAGAAGAAGGGGCTGAAGTTGGCCGGTTGGGTTGCTGGGAATTGAATCGTGCAATTTCTTaGTCTATAGCCGTAGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VALGEEGAEVGRLGCWELNRAIS*SIAVVF Trigger: AAACACTACGGCTATAGACAAAGAAATTGCACGATT...CAATTCCCAGCAACCCAACCGGCCAACTTCAGCCCCTTCTTCTCCAAGAGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| CDS-3UTR CAA 90 bp | CTTCAAGAATACTTTTCTCAGCTTGGTGTGGTAGCACACACTTGTCATCCCAGCTCTTTGACTGTGGTGTaGGTGACTTGGAGGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LQEYFSQLGVVAHTCHPSSLTVV*VTWRKG Trigger: GCCCTTCCTCCAAGTCACCAACACCACAGTCAAAGA...GCTGGGATGACAAGTGTGTGCTACCACACCAAGCTGAGAAAAGTATTCTTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
||
| CDS-3UTR CAA 90 bp | GAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTTGTTGCTTGTGATGTaGGGCTTTAATAATATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ESGNASLVQPAGQTDRLCLLLVM*GFNNMG Trigger: CCCCATATTATTAAAGCCCAACATCACAAGCAACAA...GCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 ENSMUST00000206583.2 ENSMUST00000206676.2 |
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| CDS-3UTR CAA 90 bp | TGTGTGCTGAGACCCTCCAGTGAGGAACAGAATCCGGGAATGCATCACTGGTGCTTGTTGCTTGTGATGTaGGGCTTTAATAATATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CVLRPSSEEQNPGMHHWCLLLVM*GFNNMG Trigger: CCCCATATTATTAAAGCCCAACATCACAAGCAACAA...GCACCAGTGATGCATTCCCGGATTCTGTTCCTCACTGGAGGGTCTCAGCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 ENSMUST00000206583.2 ENSMUST00000206676.2 |
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| CDS-3UTR CAA 90 bp | GGGTTGCTGGGAATTGAAGTTCAGGACAGTGTATGCGACGTCATCCACCTTGTTCTTCATGGTGATCATTaGGAAGAGCAGGGATCCATT | + |
|
Preference number: 5 (lower is better) Translates to: GLLGIEVQDSVCDVIHLVLHGDH*EEQGSI Trigger: AATGGATCCCTGCTCTTCCAAATGATCACCATGAAG...AACAAGGTGGATGACGTCGCATACACTGTCCTGAACTTCAATTCCCAGCAACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000206583.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CAA 90 bp | TGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTTCTTTTCTTCATGGTGATCATTaGGAAGAGCAGGGATCCATT | + |
|
Preference number: 5 (lower is better) Translates to: CITGAASRTDGQIMLTSFLHGDH*EEQGSI Trigger: AATGGATCCCTGCTCTTCCAAATGATCACCATGAAG...AAAAGAAGTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
||
| CDS-3UTR CAA 90 bp | GGGGCTAAGGGAGACAGAAATCTAGTGGCCCTAAGGCAAAGTGATCAGCTCGCATTGTTGCTTGTGATGTaGGGCTTTAATAATATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GAKGDRNLVALRQSDQLALLLVM*GFNNMG Trigger: CCCCATATTATTAAAGCCCAACATCACAAGCAACAA...TGCGAGCTGATCACTTTGCCTTAGGGCCACTAGATTTCTGTCTCCCTTAGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
||
| CDS-3UTR CAA 90 bp | GCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATGCTCACTTCTTTTTCATATTATGTCCAGCTaGATTGAGTTGCTCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASLVQPAGQTDRLCSLLFHIMSS*IELLLL Trigger: CAGGAGGAGCAACTCAATCAAGCTGGACATAATATG...AAAAAGAAGTGAGCATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000205308.2 ENSMUST00000206676.2 |
||
| CDS TCA 90 bp | ATGATACGGAGTCGTCACCCTCCACGGGATTGGAGTTGTTGCTTGTaGTGTTGGGCTTTAATAATATGGGGTGTACATGAAATCGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: MIRSRHPPRDWSCCL*CWALIIWGVHEIAQ Trigger: CTGTGCGATTTCATGTACACCCCATATTATTAAAGCCCAACATCACAAGCAACAACTCCAATCCCGTGGAGGGTGACGACTCCGTATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 ENSMUST00000206171.2 ENSMUST00000206583.2 ENSMUST00000206676.2 |
||
| CDS-3UTR CAA 90 bp | CAGAATCCGGGAATGCATCACTGGTGCAGCCAGCAGGACAGACGGACAGATTATAATCGTGCAATTTCTTaGTCTATAGCCGTAGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: QNPGMHHWCSQQDRRTDYNRAIS*SIAVVF Trigger: AAACACTACGGCTATAGACAAAGAAATTGCACGATT...ATAATCTGTCCGTCTGTCCTGCTGGCTGCACCAGTGATGCATTCCCGGATTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| CDS-3UTR CAA 90 bp | GAAGGTGCTCTGAATAGGTCAATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGTCTTTGACTGTGGTGTaGGTGACTTGGAGGAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: EGALNRSIFNNLGQESERSLTVV*VTWRKG Trigger: GCCCTTCCTCCAAGTCACCAACACCACAGTCAAAGA...CCTTTCACTTTCCTGACCCAGATTGTTGAAAATTGACCTATTCAGAGCACCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
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| CDS GCA 90 bp | CAGACAGCTTCAGCCTGTCACCTTCTGAAAGGCTTTCACCATTTCTaGTCCACAGGTAGTTTATATTATCAGGGTCAGTGTAAGAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: QTASACHLLKGFHHF*STGSLYYQGQCKSH Trigger: GTGACTCTTACACTGACCCTGATAATATAAACTACCTGTGGAGCAGAAATGGTGAAAGCCTTTCAGAAGGTGACAGGCTGAAGCTGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 ENSMUST00000206171.2 ENSMUST00000206583.2 ENSMUST00000206676.2 |
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| CDS-3UTR CAA 90 bp | GTCATCCACCTTGTTAGGAGAGTTGTCAGAAGGAGCCAGATTGTGGTTGGAGGCAATCGTGCAATTTCTTaGTCTATAGCCGTAGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: VIHLVRRVVRRSQIVVGGNRAIS*SIAVVF Trigger: AAACACTACGGCTATAGACAAAGAAATTGCACGATT...GCCTCCAACCACAATCTGGCTCCTTCTGACAACTCTCCTAACAAGGTGGATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206583.2 |
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| CDS-3UTR CAA 90 bp | TTGCTGGGAATTGAAGTTCAGGACAGTGTATGCGACGTCATCCACCTTGTTAGGAATATTATGTCCAGCTaGATTGAGTTGCTCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: LLGIEVQDSVCDVIHLVRNIMSS*IELLLL Trigger: CAGGAGGAGCAACTCAATCAAGCTGGACATAATATT...CCTAACAAGGTGGATGACGTCGCATACACTGTCCTGAACTTCAATTCCCAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000206687.2 |
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| CDS-3UTR CAA 90 bp | GGTGCTCTGAATAGGTCAATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGGTGCTTCATGGTGATCATTaGGAAGAGCAGGGATCCATT | + |
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Preference number: 5 (lower is better) Translates to: GALNRSIFNNLGQESERVLHGDH*EEQGSI Trigger: AATGGATCCCTGCTCTTCCAAATGATCACCATGAAG...CACCCTTTCACTTTCCTGACCCAGATTGTTGAAAATTGACCTATTCAGAGCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
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| CDS-3UTR CAA 90 bp | TACATAGTTCAAAGGTTGCCAAGGCTGCATGGTGAGATCCTTGTTAGGAGAGTTCTTCATGGTGATCATTaGGAAGAGCAGGGATCCATT | + |
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Preference number: 5 (lower is better) Translates to: YIVQRLPRLHGEILVRRVLHGDH*EEQGSI Trigger: AATGGATCCCTGCTCTTCCAAATGATCACCATGAAG...AACTCTCCTAACAAGGATCTCACCATGCAGCCTTGGCAACCTTTGAACTATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
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| CDS-3UTR CAA 90 bp | TTTTCAAATAATTTCAACACTCTCCGAAGGTTAGCTCTGTGCTGCTTTTTCACATGTGGTGTTGGTGACTaGGAGGAAGGGCTGAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: FSNNFNTLRRLALCCFFTCGVGD*EEGLSH Trigger: GTGACTCAGCCCTTCCTCCAAGTCACCAACACCACA...TGTGAAAAAGCAGCACAGAGCTAACCTTCGGAGAGTGTTGAAATTATTTGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 |
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| CDS-3UTR CAA 90 bp | GCCAACTTTGGTTACATAGTTCAAAGGTTGCCAAGGCTGCATGGTGAGATCCTTAATATTATGTCCAGCTaGATTGAGTTGCTCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: ANFGYIVQRLPRLHGEILNIMSS*IELLLL Trigger: CAGGAGGAGCAACTCAATCAAGCTGGACATAATATT...AAGGATCTCACCATGCAGCCTTGGCAACCTTTGAACTATGTAACCAAAGTTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
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| CDS-3UTR CAA 90 bp | AAGGCAAGTGTATGGCCACAGTTCAAGGCCAACTTTGGTTACATAGTTCAAAGGACAAGTAGAAGAACATaGTTGTCTTCAGCAACCTGG | + |
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Preference number: 5 (lower is better) Translates to: KASVWPQFKANFGYIVQRTSRRT*LSSATW Trigger: CCAGGTTGCTGAAGACAACAATGTTCTTCTACTTGT...CCTTTGAACTATGTAACCAAAGTTGGCCTTGAACTGTGGCCATACACTTGCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
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| CDS-3UTR CAA 90 bp | GAAGGTGCTCTGAATAGGTCAATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGCTTCATGGTGATCATTaGGAAGAGCAGGGATCCATT | + |
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Preference number: 5 (lower is better) Translates to: EGALNRSIFNNLGQESERLHGDH*EEQGSI Trigger: AATGGATCCCTGCTCTTCCAAATGATCACCATGAAG...CCTTTCACTTTCCTGACCCAGATTGTTGAAAATTGACCTATTCAGAGCACCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
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| CDS-3UTR CAA 90 bp | AATTTTGATACCTCACTCTCAGCCAAATTTGAAAGCCTAGAAGGGTTGAGTTTTTCTTTGACTGTGGTGTaGGTGACTTGGAGGAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: NFDTSLSAKFESLEGLSFSLTVV*VTWRKG Trigger: GCCCTTCCTCCAAGTCACCAACACCACAGTCAAAGA...AAAACTCAACCCTTCTAGGCTTTCAAATTTGGCTGAGAGTGAGGTATCAAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
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| CDS-3UTR CAA 90 bp | CTTCAAGAATACTTTTCTCAGCTTGGTGTGGTAGCACACACTTGTCATCCCAGCAATCGTGCAATTTCTTaGTCTATAGCCGTAGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: LQEYFSQLGVVAHTCHPSNRAIS*SIAVVF Trigger: AAACACTACGGCTATAGACAAAGAAATTGCACGATT...GCTGGGATGACAAGTGTGTGCTACCACACCAAGCTGAGAAAAGTATTCTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
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| CDS-3UTR CAA 90 bp | GCTAAGGCAAGTGTATGGCCACAGTTCAAGGCCAACTTTGGTTACATAGTTCAATTGTTGCTTGTGATGTaGGGCTTTAATAATATGGGG | + |
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Preference number: 5 (lower is better) Translates to: AKASVWPQFKANFGYIVQLLLVM*GFNNMG Trigger: CCCCATATTATTAAAGCCCAACATCACAAGCAACAA...TTGAACTATGTAACCAAAGTTGGCCTTGAACTGTGGCCATACACTTGCCTTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206171.2 |
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| CDS GCA 90 bp | GTATGCTTGCCCCGTGAAATTCATATTACTATTTGGTACAAATCGTaGAATTTCTTTGTCTATAGCCGTAGTGTTTCCCTTGTACCAGGC | + |
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Preference number: 5 (lower is better) Translates to: VCLPREIHITIWYKS*NFFVYSRSVSLVPG Trigger: GCCTGGTACAAGGGAAACACTACGGCTATAGACAAAGAAATTGCACGATTTGTACCAAATAGTAATATGAATTTCACGGGGCAAGCATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206171.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| CDS-3UTR CAA 90 bp | GCTCTGAATAGGTCAATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGGTGAGAAATCGTGCAATTTCTTaGTCTATAGCCGTAGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: ALNRSIFNNLGQESERVRNRAIS*SIAVVF Trigger: AAACACTACGGCTATAGACAAAGAAATTGCACGATT...TCTCACCCTTTCACTTTCCTGACCCAGATTGTTGAAAATTGACCTATTCAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
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| CDS-3UTR CAA 90 bp | AGGTCAATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGGTGAGAAATTTTGATAATATTATGTCCAGCTaGATTGAGTTGCTCCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: RSIFNNLGQESERVRNFDNIMSS*IELLLL Trigger: CAGGAGGAGCAACTCAATCAAGCTGGACATAATATT...ATCAAAATTTCTCACCCTTTCACTTTCCTGACCCAGATTGTTGAAAATTGACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
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| CDS-3UTR CAA 90 bp | ATTTTCAACAATCTGGGTCAGGAAAGTGAAAGGGTGAGAAATTTTGATACCTCAAATCGTGCAATTTCTTaGTCTATAGCCGTAGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: IFNNLGQESERVRNFDTSNRAIS*SIAVVF Trigger: AAACACTACGGCTATAGACAAAGAAATTGCACGATT...TGAGGTATCAAAATTTCTCACCCTTTCACTTTCCTGACCCAGATTGTTGAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 |
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| CDS CAA 72 bp | TCAGAAGGAGCCAGATTGTGGTTGGAGGCTGAGGGTTaGTGCTCTGTGAGATCTCGCTGGTCACTTCCCATA | + |
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Preference number: 6 (lower is better) Translates to: SEGARLWLEAEG*CSVRSRWSLPI Trigger: TATGGGAAGTGACCAGCGAGATCTCACAGAGCACAAACCCTCAGCCTCCAACCACAATCTGGCTCCTTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205308.2 ENSMUST00000206676.2 |
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| CDS CAA 90 bp | GGAGAGTTGTCAGAAGGAGCCAGATTGTGGTTGGAGGCTGAGGGTTaGTGCTCTGTGAGATCTCGCTGGTCACTTCCCATATTATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: GELSEGARLWLEAEG*CSVRSRWSLPILCP Trigger: TGGACATAATATGGGAAGTGACCAGCGAGATCTCACAGAGCACAAACCCTCAGCCTCCAACCACAATCTGGCTCCTTCTGACAACTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205308.2 ENSMUST00000206676.2 |
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| CDS CAA 90 bp | GTGCTCTGTGAGATCTCGCTGGTCACTTCCCATATTATGTCCAGCTaGATTGAGTTGCTCCTCCTGACGCTGACTGGATTCGAGATTTCA | + |
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Preference number: 6 (lower is better) Translates to: VLCEISLVTSHIMSS*IELLLLTLTGFEIS Trigger: TGAAATCTCGAATCCAGTCAGCGTCAGGAGGAGCAACTCAATCAAGCTGGACATAATATGGGAAGTGACCAGCGAGATCTCACAGAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205308.2 ENSMUST00000206676.2 |
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| CDS CAA 72 bp | GATACGGAGTCGTCACCCTCCACGGGATTGGAGTTGTaGCTTGTGATGTTGGGCTTTAATAATATGGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: DTESSPSTGLEL*LVMLGFNNMGC Trigger: ACACCCCATATTATTAAAGCCCAACATCACAAGCAACAACTCCAATCCCGTGGAGGGTGACGACTCCGTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 ENSMUST00000206171.2 ENSMUST00000206583.2 ENSMUST00000206676.2 |
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| CDS CAA 72 bp | AATGATACGGAGTCGTCACCCTCCACGGGATTGGAGTaGTTGCTTGTGATGTTGGGCTTTAATAATATGGGG | + |
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Preference number: 6 (lower is better) Translates to: NDTESSPSTGLE*LLVMLGFNNMG Trigger: CCCCATATTATTAAAGCCCAACATCACAAGCAACAACTCCAATCCCGTGGAGGGTGACGACTCCGTATCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 ENSMUST00000206171.2 ENSMUST00000206583.2 ENSMUST00000206676.2 |
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| CDS GCA 72 bp | TCAGCCTGTCACCTTCTGAAAGGCTTTCACCATTTCTaGTCCACAGGTAGTTTATATTATCAGGGTCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: SACHLLKGFHHF*STGSLYYQGQC Trigger: ACACTGACCCTGATAATATAAACTACCTGTGGAGCAGAAATGGTGAAAGCCTTTCAGAAGGTGACAGGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000098666.9 ENSMUST00000098669.8 ENSMUST00000206171.2 ENSMUST00000206583.2 ENSMUST00000206676.2 |
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| CDS TCA 72 bp | TCATATCTAGTGTGTAGACTCCCATATCCTTCATGGTaGTCATTTGGAAGAGCAGGGATCCATTGCTGTATA | + |
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Preference number: 6 (lower is better) Translates to: SYLVCRLPYPSW*SFGRAGIHCCI Trigger: TATACAGCAATGGATCCCTGCTCTTCCAAATGATCACCATGAAGGATATGGGAGTCTACACACTAGATATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206171.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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| CDS CAA 90 bp | CCCGTGAAATTCATATTACTATTTGGTACAAATCGTGCAATTTCTTaGTCTATAGCCGTAGTGTTTCCCTTGTACCAGGCAAAGGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PVKFILLFGTNRAIS*SIAVVFPLYQAKAP Trigger: TGGAGCCTTTGCCTGGTACAAGGGAAACACTACGGCTATAGACAAAGAAATTGCACGATTTGTACCAAATAGTAATATGAATTTCACGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000098666.9 ENSMUST00000098668.3 ENSMUST00000098669.8 ENSMUST00000205308.2 ENSMUST00000206171.2 ENSMUST00000206583.2 ENSMUST00000206676.2 ENSMUST00000206687.2 |
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