Pregenerated sensors for CDYL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031758Ensembl transcript IDs: ENSMUST00000109102.4
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGGACCCTGGGCTCCGATGGTAGAAACACACACAGGGCCCGGCTaGGAGTCTGAGACCCTTGAGCAAGTGGGGGCAGGTGAGCCGGGG | + |
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Preference number: 1 (lower is better) Translates to: GGPWAPMVETHTGPG*ESETLEQVGAGEPG Trigger: CCCCGGCTCACCTGCCCCCACTTGCTCAAGGGTCTCAGACTCCCAGCCGGGCCCTGTGTGTGTTTCTACCATCGGAGCCCAGGGTCCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| 3UTR CCA 90 bp | GCGGAGCGCTTAGAAGATGGATCCCTGGAAGGCTCTATGGCTGGCTaGGACAGGGTGCACAGGGAGGCCAAGGGTGCTGTGTTTGCCACC | + |
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Preference number: 1 (lower is better) Translates to: AERLEDGSLEGSMAG*DRVHREAKGAVFAT Trigger: GGTGGCAAACACAGCACCCTTGGCCTCCCTGTGCACCCTGTCCCAGCCAGCCATAGAGCCTTCCAGGGATCCATCTTCTAAGCGCTCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| 3UTR TCA 90 bp | GTGATGGCCTCATCTCCAAGTTGGAGGCACTGTGTAGACACAGACTaGGTCGGGAGGATGAGGGAGGTTGGTCTTCCCCCTTCTGGACCA | + |
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Preference number: 1 (lower is better) Translates to: VMASSPSWRHCVDTD*VGRMREVGLPPSGP Trigger: TGGTCCAGAAGGGGGAAGACCAACCTCCCTCATCCTCCCGACTCAGTCTGTGTCTACACAGTGCCTCCAACTTGGAGATGAGGCCATCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| 3UTR CCA 90 bp | GAGGCACTGTGTAGACACAGACTGAGTCGGGAGGATGAGGGAGGTTaGTCTTCCCCCTTCTGGACCAAGGTAGGAGAGTTTCAGCTAGTG | + |
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Preference number: 1 (lower is better) Translates to: EALCRHRLSREDEGG*SSPFWTKVGEFQLV Trigger: CACTAGCTGAAACTCTCCTACCTTGGTCCAGAAGGGGGAAGACCAACCTCCCTCATCCTCCCGACTCAGTCTGTGTCTACACAGTGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| 3UTR TCA 90 bp | AGACCAAGCCCTAAGAGTCACACCGAGTTGCATTGGAGAGAAGACTaGAGCCAGGCCTATGTAGTCAAGAGCTTACCGCACGCTCGTTGG | + |
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Preference number: 1 (lower is better) Translates to: RPSPKSHTELHWRED*SQAYVVKSLPHARW Trigger: CCAACGAGCGTGCGGTAAGCTCTTGACTACATAGGCCTGGCTTCAGTCTTCTCTCCAATGCAACTCGGTGTGACTCTTAGGGCTTGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGATGGATCCCTGGAAGGCTCTATGGCTGGCTGGGACAGGGTGCACAGGGAGAGACCCTTGAGCAAGTaGGGGCAGGTGAGCCGGGGC | + |
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Preference number: 2 (lower is better) Translates to: EDGSLEGSMAGWDRVHRERPLSK*GQVSRG Trigger: GCCCCGGCTCACCTGCCCCCACTTGCTCAAGGGTCT...CTCCCTGTGCACCCTGTCCCAGCCAGCCATAGAGCCTTCCAGGGATCCATCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGATGGATCCCTGGAAGGCTCTATGGCTGGCTGGGACAGGGTGCACAGGGAGCACACAGGGCCCGGCTaGGAGTCTGAGACCCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: EDGSLEGSMAGWDRVHREHTGPG*ESETLE Trigger: CTCAAGGGTCTCAGACTCCCAGCCGGGCCCTGTGTG...CTCCCTGTGCACCCTGTCCCAGCCAGCCATAGAGCCTTCCAGGGATCCATCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| 3UTR CAA 90 bp | TGGCTGGCTGGGACAGGGTGCACAGGGAGGCCAAGGGTGCTGTGTTaGCCACCTTTACACAAAATCAAACCAATGAGGAACAACCGAAGG | + |
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Preference number: 2 (lower is better) Translates to: WLAGTGCTGRPRVLC*PPLHKIKPMRNNRR Trigger: CCTTCGGTTGTTCCTCATTGGTTTGATTTTGTGTAAAGGTGGCAAACACAGCACCCTTGGCCTCCCTGTGCACCCTGTCCCAGCCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| 3UTR-3UTR TCA 90 bp | GAAGATGGATCCCTGGAAGGCTCTATGGCTGGCTGGGACAGGGTGCACAGGGAGACAAAATCAAACCAATaGGGAACAACCGAAGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: EDGSLEGSMAGWDRVHRETKSNQ*GTTEGH Trigger: GTGCCCTTCGGTTGTTCCTCATTGGTTTGATTTTGT...CTCCCTGTGCACCCTGTCCCAGCCAGCCATAGAGCCTTCCAGGGATCCATCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| 3UTR-3UTR CCA 90 bp | GCTCGTTGGTCTGTGGGTTCCCTAAGACGATCGTTCCCTGGTCCCAGATCACATGCCTCATCTCCAAGTTaGAGGCACTGTGTAGACACA | + |
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Preference number: 2 (lower is better) Translates to: ARWSVGSLRRSFPGPRSHASSPS*RHCVDT Trigger: TGTGTCTACACAGTGCCTCCAACTTGGAGATGAGGC...ATGTGATCTGGGACCAGGGAACGATCGTCTTAGGGAACCCACAGACCAACGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| 3UTR-3UTR CCA 90 bp | AGTTGGGTATTAAGACCAAGCCCTAAGAGTCACACCGAGTTGCATTGGAGAGAAGGAAGGCTCTATGGCTaGCTGGGACAGGGTGCACAG | + |
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Preference number: 2 (lower is better) Translates to: SWVLRPSPKSHTELHWREGRLYG*LGQGAQ Trigger: CTGTGCACCCTGTCCCAGCCAGCCATAGAGCCTTCC...TTCTCTCCAATGCAACTCGGTGTGACTCTTAGGGCTTGGTCTTAATACCCAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| 3UTR CCA 72 bp | GAAAGGTCGACAGGGCCTGGCGGAGCGCTTAGAAGATaGATCCCTGGAAGGCTCTATGGCTGGCTGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: ERSTGPGGALRR*IPGRLYGWLGQ Trigger: CTGTCCCAGCCAGCCATAGAGCCTTCCAGGGATCCATCTTCTAAGCGCTCCGCCAGGCCCTGTCGACCTTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| 3UTR TCA 72 bp | TCATCTCCAAGTTGGAGGCACTGTGTAGACACAGACTaGGTCGGGAGGATGAGGGAGGTTGGTCTTCCCCCT | + |
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Preference number: 3 (lower is better) Translates to: SSPSWRHCVDTD*VGRMREVGLPP Trigger: AGGGGGAAGACCAACCTCCCTCATCCTCCCGACTCAGTCTGTGTCTACACAGTGCCTCCAACTTGGAGATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| 3UTR CCA 72 bp | CAGGCCTATGTAGTCAAGAGCTTACCGCACGCTCGTTaGTCTGTGGGTTCCCTAAGACGATCGTTCCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: QAYVVKSLPHAR*SVGSLRRSFPG Trigger: ACCAGGGAACGATCGTCTTAGGGAACCCACAGACCAACGAGCGTGCGGTAAGCTCTTGACTACATAGGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| 3UTR-3UTR CAA 90 bp | CAAAATCAAACCAATGAGGAACAACCGAAGGGCACGAGGAATGGATACAACCGTGGGAGTCTGAGACCCTaGAGCAAGTGGGGGCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: QNQTNEEQPKGTRNGYNRGSLRP*SKWGQV Trigger: CACCTGCCCCCACTTGCTCAAGGGTCTCAGACTCCC...ACGGTTGTATCCATTCCTCGTGCCCTTCGGTTGTTCCTCATTGGTTTGATTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| 3UTR TCA 72 bp | CCTAAGAGTCACACCGAGTTGCATTGGAGAGAAGACTaGAGCCAGGCCTATGTAGTCAAGAGCTTACCGCAC | + |
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Preference number: 3 (lower is better) Translates to: PKSHTELHWRED*SQAYVVKSLPH Trigger: GTGCGGTAAGCTCTTGACTACATAGGCCTGGCTTCAGTCTTCTCTCCAATGCAACTCGGTGTGACTCTTAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR GCA 90 bp | CCCTGGGCTCCGATGGTAGAAACACACACAGGGCCCGGCTGGGAGTCTGAGACCCATCTGTGGCCGCGTTaGACAGGGCTCGCCGGACTT | + |
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Preference number: 4 (lower is better) Translates to: PWAPMVETHTGPGWESETHLWPR*TGLAGL Trigger: AAGTCCGGCGAGCCCTGTGCAACGCGGCCACAGATG...GGTCTCAGACTCCCAGCCGGGCCCTGTGTGTGTTTCTACCATCGGAGCCCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR CCA 90 bp | CCCTGGGCTCCGATGGTAGAAACACACACAGGGCCCGGCTGGGAGTCTGAGACCGGGAGTCCAGGCCCTTaGAGGAGCTCCAGAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PWAPMVETHTGPGWESETGSPGP*RSSRAA Trigger: AGCAGCTCTGGAGCTCCTCCAAGGGCCTGGACTCCC...GGTCTCAGACTCCCAGCCGGGCCCTGTGTGTGTTTCTACCATCGGAGCCCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR TCA 90 bp | GGTGGACCCTGGGCTCCGATGGTAGAAACACACACAGGGCCCGGCTGGGAGTCTTCACAGTGCAGGAGGTaGTGCTCCGGTTCCCACGTG | + |
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Preference number: 4 (lower is better) Translates to: GGPWAPMVETHTGPGWESSQCRR*CSGSHV Trigger: CACGTGGGAACCGGAGCATCACCTCCTGCACTGTGA...AGACTCCCAGCCGGGCCCTGTGTGTGTTTCTACCATCGGAGCCCAGGGTCCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR TCA 90 bp | CCCTGGGCTCCGATGGTAGAAACACACACAGGGCCCGGCTGGGAGTCTGAGACCTGTCCTGCAGATAGCTaGACAGGGAGTCCAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: PWAPMVETHTGPGWESETCPADS*TGSPGP Trigger: AGGGCCTGGACTCCCTGTTCAGCTATCTGCAGGACA...GGTCTCAGACTCCCAGCCGGGCCCTGTGTGTGTTTCTACCATCGGAGCCCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR GCA 90 bp | CCCTGGGCTCCGATGGTAGAAACACACACAGGGCCCGGCTGGGAGTCTGAGACCAAGGCCCCGGCTGCATaGCTCTTGGGCAGTGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: PWAPMVETHTGPGWESETKAPAA*LLGSEF Trigger: AAACTCACTGCCCAAGAGGCATGCAGCCGGGGCCTT...GGTCTCAGACTCCCAGCCGGGCCCTGTGTGTGTTTCTACCATCGGAGCCCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR GCA 90 bp | GGTGGACCCTGGGCTCCGATGGTAGAAACACACACAGGGCCCGGCTGGGAGTCTCTCTTCACAGGGCTGTaGAGGTTCAGGCCTCCATTG | + |
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Preference number: 4 (lower is better) Translates to: GGPWAPMVETHTGPGWESLFTGL*RFRPPL Trigger: CAATGGAGGCCTGAACCTGCACAGCCCTGTGAAGAG...AGACTCCCAGCCGGGCCCTGTGTGTGTTTCTACCATCGGAGCCCAGGGTCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR CCA 90 bp | CCCTGGGCTCCGATGGTAGAAACACACACAGGGCCCGGCTGGGAGTCTGAGACCAGGACACAGTCTTGGTaGCCCTGTCTGGAGCCTTAC | + |
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Preference number: 4 (lower is better) Translates to: PWAPMVETHTGPGWESETRTQSW*PCLEPY Trigger: GTAAGGCTCCAGACAGGGCCACCAAGACTGTGTCCT...GGTCTCAGACTCCCAGCCGGGCCCTGTGTGTGTTTCTACCATCGGAGCCCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR TCA 90 bp | GAAGATGGATCCCTGGAAGGCTCTATGGCTGGCTGGGACAGGGTGCACAGGGAGTTCTCCAGGCCGTTCTaGGCCTTCTTCAGGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: EDGSLEGSMAGWDRVHREFSRPF*AFFRGM Trigger: CATGCCCCTGAAGAAGGCTCAGAACGGCCTGGAGAA...CTCCCTGTGCACCCTGTCCCAGCCAGCCATAGAGCCTTCCAGGGATCCATCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR TCA 90 bp | GGTGGACCCTGGGCTCCGATGGTAGAAACACACACAGGGCCCGGCTGGGAGTCTGTAGCGTATGGTGTCTaGAACCAGGCCTTCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: GGPWAPMVETHTGPGWESVAYGV*NQAFSL Trigger: CAGTGAGAAGGCCTGGTTTCAGACACCATACGCTAC...AGACTCCCAGCCGGGCCCTGTGTGTGTTTCTACCATCGGAGCCCAGGGTCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR TCA 90 bp | GAGGATGAGGGAGGTTGGTCTTCCCCCTTCTGGACCAAGGTAGGAGAGTTTCAGGGGCCAGAAGACCTGTaGCACAAGGCCCCGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: EDEGGWSSPFWTKVGEFQGPEDL*HKAPAA Trigger: TGCAGCCGGGGCCTTGTGTCACAGGTCTTCTGGCCC...CTGAAACTCTCCTACCTTGGTCCAGAAGGGGGAAGACCAACCTCCCTCATCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR TCA 90 bp | GAAGATGGATCCCTGGAAGGCTCTATGGCTGGCTGGGACAGGGTGCACAGGGAGCACCTCCTCCAGCACTaGCTTCAGGAAGCTTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: EDGSLEGSMAGWDRVHREHLLQH*LQEASD Trigger: GTCCGAAGCTTCCTGAAGTCAGTGCTGGAGGAGGTG...CTCCCTGTGCACCCTGTCCCAGCCAGCCATAGAGCCTTCCAGGGATCCATCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR GCA 90 bp | GGTGGACCCTGGGCTCCGATGGTAGAAACACACACAGGGCCCGGCTGGGAGTCTCACGAAACCGACAGTTaGTTTCATTCTGGCGGACGC | + |
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Preference number: 4 (lower is better) Translates to: GGPWAPMVETHTGPGWESHETDS*FHSGGR Trigger: GCGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGTG...AGACTCCCAGCCGGGCCCTGTGTGTGTTTCTACCATCGGAGCCCAGGGTCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR CCA 90 bp | GGTGGACCCTGGGCTCCGATGGTAGAAACACACACAGGGCCCGGCTGGGAGTCTCAGTTGCTTTCATTCTaGCGGACGCTGTACCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: GGPWAPMVETHTGPGWESQLLSF*RTLYLS Trigger: GCTCAGGTACAGCGTCCGCCAGAATGAAAGCAACTG...AGACTCCCAGCCGGGCCCTGTGTGTGTTTCTACCATCGGAGCCCAGGGTCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR CCA 90 bp | CCCGGCTGGGAGTCTGAGACCCTTGAGCAAGTGGGGGCAGGTGAGCCGGGGCCCTTGTTATCCGAAGTCTaGCTGGACAGAAGAATGTGT | + |
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Preference number: 4 (lower is better) Translates to: PGWESETLEQVGAGEPGPLLSEV*LDRRMC Trigger: ACACATTCTTCTGTCCAGCCAGACTTCGGATAACAA...GGGCCCCGGCTCACCTGCCCCCACTTGCTCAAGGGTCTCAGACTCCCAGCCGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR TCA 90 bp | GAGGATGAGGGAGGTTGGTCTTCCCCCTTCTGGACCAAGGTAGGAGAGTTTCAGCACTGCCCACGGCACTaGGCAGCAGTAGCTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: EDEGGWSSPFWTKVGEFQHCPRH*AAVACC Trigger: ACAGCAAGCTACTGCTGCTCAGTGCCGTGGGCAGTG...CTGAAACTCTCCTACCTTGGTCCAGAAGGGGGAAGACCAACCTCCCTCATCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR GCA 90 bp | GAGGATGAGGGAGGTTGGTCTTCCCCCTTCTGGACCAAGGTAGGAGAGTTTCAGCCCACGTGTCCTCCGTaGTGCCGTAGCCTTTCCATC | + |
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Preference number: 4 (lower is better) Translates to: EDEGGWSSPFWTKVGEFQPTCPP*CRSLSI Trigger: GATGGAAAGGCTACGGCAGCACGGAGGACACGTGGG...CTGAAACTCTCCTACCTTGGTCCAGAAGGGGGAAGACCAACCTCCCTCATCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR CCA 90 bp | GAAGATGGATCCCTGGAAGGCTCTATGGCTGGCTGGGACAGGGTGCACAGGGAGACCAGGCCTTCTCACTaGCCCATACGATGTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: EDGSLEGSMAGWDRVHRETRPSH*PIRCHR Trigger: TCTGTGACATCGTATGGGCCAGTGAGAAGGCCTGGT...CTCCCTGTGCACCCTGTCCCAGCCAGCCATAGAGCCTTCCAGGGATCCATCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR GCA 90 bp | GAGGATGAGGGAGGTTGGTCTTCCCCCTTCTGGACCAAGGTAGGAGAGTTTCAGACGTGTCCTCCGTGCTaGCGTAGCCTTTCCATCGGA | + |
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Preference number: 4 (lower is better) Translates to: EDEGGWSSPFWTKVGEFQTCPPC*RSLSIG Trigger: TCCGATGGAAAGGCTACGGCAGCACGGAGGACACGT...CTGAAACTCTCCTACCTTGGTCCAGAAGGGGGAAGACCAACCTCCCTCATCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR GCA 90 bp | GCTCGTTGGTCTGTGGGTTCCCTAAGACGATCGTTCCCTGGTCCCAGATCACATCAGTCACTGGCCTCCTaGTCTCCAAGCTGGTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: ARWSVGSLRRSFPGPRSHQSLAS*SPSWSF Trigger: GAACGACCAGCTTGGAGAGCAGGAGGCCAGTGACTG...ATGTGATCTGGGACCAGGGAACGATCGTCTTAGGGAACCCACAGACCAACGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR GCA 90 bp | GGTGGACCCTGGGCTCCGATGGTAGAAACACACACAGGGCCCGGCTGGGAGTCTGATCTCAGGAGTCAGTaGATTGTTATCCGAAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: GGPWAPMVETHTGPGWESDLRSQ*IVIRSL Trigger: CAGACTTCGGATAACAATGCACTGACTCCTGAGATC...AGACTCCCAGCCGGGCCCTGTGTGTGTTTCTACCATCGGAGCCCAGGGTCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR CCA 90 bp | GCTCGTTGGTCTGTGGGTTCCCTAAGACGATCGTTCCCTGGTCCCAGATCACATCGCAGCATGACCTCTTaGCTGAAAGTCGTGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: ARWSVGSLRRSFPGPRSHRSMTS*LKVVGQ Trigger: CTGGCCCACGACTTTCAGCCAAGAGGTCATGCTGCG...ATGTGATCTGGGACCAGGGAACGATCGTCTTAGGGAACCCACAGACCAACGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR TCA 90 bp | GAGGATGAGGGAGGTTGGTCTTCCCCCTTCTGGACCAAGGTAGGAGAGTTTCAGGCCGGACTTCCTTCATaGTCTCAGGAGTCAGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: EDEGGWSSPFWTKVGEFQAGLPS*SQESVH Trigger: ATGCACTGACTCCTGAGATCATGAAGGAAGTCCGGC...CTGAAACTCTCCTACCTTGGTCCAGAAGGGGGAAGACCAACCTCCCTCATCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR TCA 90 bp | GCTCGTTGGTCTGTGGGTTCCCTAAGACGATCGTTCCCTGGTCCCAGATCACATATGCCTCTTGGGCAGTaGGTTTCCGCCCACAAAACA | + |
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Preference number: 4 (lower is better) Translates to: ARWSVGSLRRSFPGPRSHMPLGQ*VSAHKT Trigger: TGTTTTGTGGGCGGAAACTCACTGCCCAAGAGGCAT...ATGTGATCTGGGACCAGGGAACGATCGTCTTAGGGAACCCACAGACCAACGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR TCA 90 bp | GAGGATGAGGGAGGTTGGTCTTCCCCCTTCTGGACCAAGGTAGGAGAGTTTCAGAGAGCTGCTTCAGCATaGCGCACTCCTTCTCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: EDEGGWSSPFWTKVGEFQRAASA*RTPSRS Trigger: TGAACGAGAAGGAGTGCGTCATGCTGAAGCAGCTCT...CTGAAACTCTCCTACCTTGGTCCAGAAGGGGGAAGACCAACCTCCCTCATCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR GCA 90 bp | GAGGATGAGGGAGGTTGGTCTTCCCCCTTCTGGACCAAGGTAGGAGAGTTTCAGGTCCCTGATAGCTTCTaGGATTCGAGTGCTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: EDEGGWSSPFWTKVGEFQVPDSF*DSSALL Trigger: AAGGAGAGCACTCGAATCGCAGAAGCTATCAGGGAC...CTGAAACTCTCCTACCTTGGTCCAGAAGGGGGAAGACCAACCTCCCTCATCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR CCA 90 bp | CAAAATCAAACCAATGAGGAACAACCGAAGGGCACGAGGAATGGATACAACCGTTCCCGTCGCAGTCACTaGCCTCCTGCTCTCCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: QNQTNEEQPKGTRNGYNRSRRSH*PPALQA Trigger: AGCTTGGAGAGCAGGAGGCCAGTGACTGCGACGGGA...ACGGTTGTATCCATTCCTCGTGCCCTTCGGTTGTTCCTCATTGGTTTGATTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR CCA 90 bp | AGTTGGGTATTAAGACCAAGCCCTAAGAGTCACACCGAGTTGCATTGGAGAGAACGGCTGCATGCCTCTTaGGCAGTGAGTTTCCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SWVLRPSPKSHTELHWRERLHAS*AVSFRP Trigger: TGGGCGGAAACTCACTGCCCAAGAGGCATGCAGCCG...TTCTCTCCAATGCAACTCGGTGTGACTCTTAGGGCTTGGTCTTAATACCCAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR GCA 90 bp | AGTTGGGTATTAAGACCAAGCCCTAAGAGTCACACCGAGTTGCATTGGAGAGAAGAGGAGCTCCAGAGCTaGTTCAGCATGACGCACTCC | + |
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Preference number: 4 (lower is better) Translates to: SWVLRPSPKSHTELHWREEELQS*FSMTHS Trigger: GGAGTGCGTCATGCTGAAGCAGCTCTGGAGCTCCTC...TTCTCTCCAATGCAACTCGGTGTGACTCTTAGGGCTTGGTCTTAATACCCAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR TCA 90 bp | CAAAATCAAACCAATGAGGAACAACCGAAGGGCACGAGGAATGGATACAACCGTCCCGTTTCCAAAGTGTaGCTCGTCCTTCTCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: QNQTNEEQPKGTRNGYNRPVSKV*LVLLRA Trigger: GGCTCTGAGAAGGACGAGTCACACTTTGGAAACGGG...ACGGTTGTATCCATTCCTCGTGCCCTTCGGTTGTTCCTCATTGGTTTGATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR TCA 90 bp | AGTTGGGTATTAAGACCAAGCCCTAAGAGTCACACCGAGTTGCATTGGAGAGAAGGCGGACGCTGTACCTaGGCCTTTTGTCAAAGACAT | + |
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Preference number: 4 (lower is better) Translates to: SWVLRPSPKSHTELHWREGGRCT*AFCQRH Trigger: ATGTCTTTGACAAAAGGCTCAGGTACAGCGTCCGCC...TTCTCTCCAATGCAACTCGGTGTGACTCTTAGGGCTTGGTCTTAATACCCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS-3UTR CCA 90 bp | GAGGATGAGGGAGGTTGGTCTTCCCCCTTCTGGACCAAGGTAGGAGAGTTTCAGATGGGTTTCTTAAACTaGATAAAGGCCTTCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EDEGGWSSPFWTKVGEFQMGFLN*IKAFTK Trigger: CTTCGTGAAGGCCTTTATCCAGTTTAAGAAACCCAT...CTGAAACTCTCCTACCTTGGTCCAGAAGGGGGAAGACCAACCTCCCTCATCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGTATTAAGACCAAGCCCTAAGAGTCACACCGAGTTGCATTGGAGAGAATCGGATGGTAGCGTATaGTGTCTGAAACCAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SWVLRPSPKSHTELHWRESDGSV*CLKPGL Trigger: AAGGCCTGGTTTCAGACACCATACGCTACCATCCGA...TTCTCTCCAATGCAACTCGGTGTGACTCTTAGGGCTTGGTCTTAATACCCAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS-3UTR GCA 90 bp | CAAAATCAAACCAATGAGGAACAACCGAAGGGCACGAGGAATGGATACAACCGTCCAAAACCACAGCACTaGAAGATGCCATCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QNQTNEEQPKGTRNGYNRPKPQH*KMPSPS Trigger: TGAAGGAGATGGCATCTTGCAGTGCTGTGGTTTTGG...ACGGTTGTATCCATTCCTCGTGCCCTTCGGTTGTTCCTCATTGGTTTGATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS GCA 90 bp | ACTGGCAGGCCGCGGGCGTCGCGGAGGAGCTTGGAGGCTCCGGCCTaGTTCCCTGACTTCACCCTCTTATCCTTGGACAAGTGGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TGRPRASRRSLEAPA*FPDFTLLSLDKWSP Trigger: CGGGCTCCACTTGTCCAAGGATAAGAGGGTGAAGTCAGGGAAGCAGGCCGGAGCCTCCAAGCTCCTCCGCGACGCCCGCGGCCTGCCAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CCA 90 bp | GGGAGAGTCTTTCCACTGGCAGGCCGCGGGCGTCGCGGAGGAGCTTaGAGGCTCCGGCCTGCTTCCCTGACTTCACCCTCTTATCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRVFPLAGRGRRGGA*RLRPASLTSPSYPW Trigger: CCAAGGATAAGAGGGTGAAGTCAGGGAAGCAGGCCGGAGCCTCCAAGCTCCTCCGCGACGCCCGCGGCCTGCCAGTGGAAAGACTCTCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 90 bp | GCCGCGGGCGTCGCGGAGGAGCTTGGAGGCTCCGGCCTGCTTCCCTaGCTTCACCCTCTTATCCTTGGACAAGTGGAGCCCGTTGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: AAGVAEELGGSGLLP*LHPLILGQVEPVEL Trigger: GAGTTCAACGGGCTCCACTTGTCCAAGGATAAGAGGGTGAAGTCAGGGAAGCAGGCCGGAGCCTCCAAGCTCCTCCGCGACGCCCGCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS-3UTR CAA 90 bp | CCCGGCTGGGAGTCTGAGACCCTTGAGCAAGTGGGGGCAGGTGAGCCGGGGCCCTTGTGGGAAGATGGTTaGCTCTTCCCGGGTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PGWESETLEQVGAGEPGPLWEDG*LFPGSR Trigger: TCTGGAACCCGGGAAGAGCAAACCATCTTCCCACAA...GGGCCCCGGCTCACCTGCCCCCACTTGCTCAAGGGTCTCAGACTCCCAGCCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS-3UTR CAA 90 bp | GAAGATGGATCCCTGGAAGGCTCTATGGCTGGCTGGGACAGGGTGCACAGGGAGAGGGAGTCCAGGCCCTaGGAGGAGCTCCAGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EDGSLEGSMAGWDRVHRERESRP*EELQSC Trigger: GCAGCTCTGGAGCTCCTCCAAGGGCCTGGACTCCCT...CTCCCTGTGCACCCTGTCCCAGCCAGCCATAGAGCCTTCCAGGGATCCATCTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CCA 90 bp | CAACTCCATTCTCCACCAGCGCGGAGTGGGTCCCGTCGCAGTCACTaGCCTCCTGCTCTCCAAGCTGGTCGTTCAACTCCAGATCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QLHSPPARSGSRRSH*PPALQAGRSTPDPA Trigger: AGCCGGATCTGGAGTTGAACGACCAGCTTGGAGAGCAGGAGGCCAGTGACTGCGACGGGACCCACTCCGCGCTGGTGGAGAATGGAGTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 90 bp | CCGCAGCATGACCTCTTGGCTGAAAGTCGTGGGCCAGAAGACCTGTaGCACAAGGCCCCGGCTGCATGCCTCTTGGGCAGTGAGTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PQHDLLAESRGPEDL*HKAPAACLLGSEFP Trigger: CGGAAACTCACTGCCCAAGAGGCATGCAGCCGGGGCCTTGTGTCACAGGTCTTCTGGCCCACGACTTTCAGCCAAGAGGTCATGCTGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS-3UTR CAA 90 bp | GGTGGACCCTGGGCTCCGATGGTAGAAACACACACAGGGCCCGGCTGGGAGTCTCAAAACAGCATTTCATaGGCCAGCGCCACACCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGPWAPMVETHTGPGWESQNSIS*ASATPR Trigger: CCTGGGTGTGGCGCTGGCCAATGAAATGCTGTTTTG...AGACTCCCAGCCGGGCCCTGTGTGTGTTTCTACCATCGGAGCCCAGGGTCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 90 bp | GAGCCTTACCCGAAGACCCCTTCTTGGGCCTGGACAGGGGAGAGTTaGCGCGCTTCCGCTTGTGGGAAGATGGTTTGCTCTTCCCGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EPYPKTPSWAWTGES*RASACGKMVCSSRV Trigger: AACCCGGGAAGAGCAAACCATCTTCCCACAAGCGGAAGCGCGTCAACTCTCCCCTGTCCAGGCCCAAGAAGGGGTCTTCGGGTAAGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 90 bp | GACTCGTCCTTCTCAGAGCCGGCATCTCCGTTCTCCAGGCCGTTCTaGGCCTTCTTCAGGGGCATGATCTGTAAGCCACTGGGGGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: DSSFSEPASPFSRPF*AFFRGMICKPLGVV Trigger: GACTACCCCCAGTGGCTTACAGATCATGCCCCTGAAGAAGGCTCAGAACGGCCTGGAGAACGGAGATGCCGGCTCTGAGAAGGACGAGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 90 bp | CTGGCCTCCTGCTCTCCAAGCTGGTCGTTCAACTCCAGATCCGGCTaGTGGGACCCGTTTCCAAAGTGTGACTCGTCCTTCTCAGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LASCSPSWSFNSRSG*WDPFPKCDSSFSEP Trigger: CGGCTCTGAGAAGGACGAGTCACACTTTGGAAACGGGTCCCATCAGCCGGATCTGGAGTTGAACGACCAGCTTGGAGAGCAGGAGGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 90 bp | GAGGAACAGCCAGCAGGCGTGAGTCGGATGGTAGCGTATGGTGTCTaGAACCAGGCCTTCTCACTGGCCCATACGATGTCACAGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EEQPAGVSRMVAYGV*NQAFSLAHTMSQRG Trigger: GCCCCTCTGTGACATCGTATGGGCCAGTGAGAAGGCCTGGTTTCAGACACCATACGCTACCATCCGACTCACGCCTGCTGGCTGTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 90 bp | GTCGTTCAACTCCAGATCCGGCTGATGGGACCCGTTTCCAAAGTGTaGCTCGTCCTTCTCAGAGCCGGCATCTCCGTTCTCCAGGCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: VVQLQIRLMGPVSKV*LVLLRAGISVLQAV Trigger: AACGGCCTGGAGAACGGAGATGCCGGCTCTGAGAAGGACGAGTCACACTTTGGAAACGGGTCCCATCAGCCGGATCTGGAGTTGAACGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS-3UTR CAA 90 bp | GAAGATGGATCCCTGGAAGGCTCTATGGCTGGCTGGGACAGGGTGCACAGGGAGTTCACCCTCTTATCCTaGGACAAGTGGAGCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EDGSLEGSMAGWDRVHREFTLLS*DKWSPL Trigger: CAACGGGCTCCACTTGTCCAAGGATAAGAGGGTGAA...CTCCCTGTGCACCCTGTCCCAGCCAGCCATAGAGCCTTCCAGGGATCCATCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS-3UTR CAA 90 bp | GCTCGTTGGTCTGTGGGTTCCCTAAGACGATCGTTCCCTGGTCCCAGATCACATCCGCAGCATGACCTCTaGGCTGAAAGTCGTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ARWSVGSLRRSFPGPRSHPQHDL*AESRGP Trigger: TGGCCCACGACTTTCAGCCAAGAGGTCATGCTGCGG...ATGTGATCTGGGACCAGGGAACGATCGTCTTAGGGAACCCACAGACCAACGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CCA 90 bp | GCTCCGGCCTGCTTCCCTGACTTCACCCTCTTATCCTTGGACAAGTaGAGCCCGTTGAACTCGTCGATAAACTCCTCACAGTGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: APACFPDFTLLSLDK*SPLNSSINSSQCRR Trigger: CCTCCTGCACTGTGAGGAGTTTATCGACGAGTTCAACGGGCTCCACTTGTCCAAGGATAAGAGGGTGAAGTCAGGGAAGCAGGCCGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 90 bp | CTGCTTCAGCATGACGCACTCCTTCTCGTTCACCTCCTCCAGCACTaGCTTCAGGAAGCTTCGGACCAGGCATTTGGACTCCTCCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLQHDALLLVHLLQH*LQEASDQAFGLLQN Trigger: GTTTTGGAGGAGTCCAAATGCCTGGTCCGAAGCTTCCTGAAGTCAGTGCTGGAGGAGGTGAACGAGAAGGAGTGCGTCATGCTGAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGTATTAAGACCAAGCCCTAAGAGTCACACCGAGTTGCATTGGAGAGAACCCGAAGACCCCTTCTaGGGCCTGGACAGGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SWVLRPSPKSHTELHWREPEDPF*GLDRGE Trigger: CTCTCCCCTGTCCAGGCCCAAGAAGGGGTCTTCGGG...TTCTCTCCAATGCAACTCGGTGTGACTCTTAGGGCTTGGTCTTAATACCCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGTATTAAGACCAAGCCCTAAGAGTCACACCGAGTTGCATTGGAGAGAATCATCTGTGGCCGCGTaGCACAGGGCTCGCCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SWVLRPSPKSHTELHWRESSVAA*HRARRT Trigger: AGTCCGGCGAGCCCTGTGCAACGCGGCCACAGATGA...TTCTCTCCAATGCAACTCGGTGTGACTCTTAGGGCTTGGTCTTAATACCCAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 90 bp | TGTCACGAAACCGACAGTTGCTTTCATTCTGGCGGACGCTGTACCTaGGCCTTTTGTCAAAGACATAGTCCTTCTCCGTCTCCAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CHETDSCFHSGGRCT*AFCQRHSPSPSPAS Trigger: GGAAGCTGGAGACGGAGAAGGACTATGTCTTTGACAAAAGGCTCAGGTACAGCGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CCA 90 bp | ACTTCCTTCATGATCTCAGGAGTCAGTGCATTGTTATCCGAAGTCTaGCTGGACAGAAGAATGTGTGTGAAGCCCTCTTCCTTCCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: TSFMISGVSALLSEV*LDRRMCVKPSSFLT Trigger: GGTGAGGAAGGAAGAGGGCTTCACACACATTCTTCTGTCCAGCCAGACTTCGGATAACAATGCACTGACTCCTGAGATCATGAAGGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CCA 90 bp | CCCAATGCTGGCCCATTAATGGCTACCACGATGGGTTTCTTAAACTaGATAAAGGCCTTCACGAAGTCCCTGATAGCTTCTGCGATTCGA | + |
|
Preference number: 5 (lower is better) Translates to: PNAGPLMATTMGFLN*IKAFTKSLIASAIR Trigger: TCGAATCGCAGAAGCTATCAGGGACTTCGTGAAGGCCTTTATCCAGTTTAAGAAACCCATCGTGGTAGCCATTAATGGGCCAGCATTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS-3UTR CAA 90 bp | CAAAATCAAACCAATGAGGAACAACCGAAGGGCACGAGGAATGGATACAACCGTTCACGAAACCGACAGTaGCTTTCATTCTGGCGGACG | + |
|
Preference number: 5 (lower is better) Translates to: QNQTNEEQPKGTRNGYNRSRNRQ*LSFWRT Trigger: CGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGTGA...ACGGTTGTATCCATTCCTCGTGCCCTTCGGTTGTTCCTCATTGGTTTGATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CAA 72 bp | CTTTCCACTGGCAGGCCGCGGGCGTCGCGGAGGAGCTaGGAGGCTCCGGCCTGCTTCCCTGACTTCACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSTGRPRASRRS*EAPACFPDFTL Trigger: GAGGGTGAAGTCAGGGAAGCAGGCCGGAGCCTCCAAGCTCCTCCGCGACGCCCGCGGCCTGCCAGTGGAAAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CCA 72 bp | TTTCCACTGGCAGGCCGCGGGCGTCGCGGAGGAGCTTaGAGGCTCCGGCCTGCTTCCCTGACTTCACCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FPLAGRGRRGGA*RLRPASLTSPS Trigger: AGAGGGTGAAGTCAGGGAAGCAGGCCGGAGCCTCCAAGCTCCTCCGCGACGCCCGCGGCCTGCCAGTGGAAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS GCA 72 bp | CCGCGGGCGTCGCGGAGGAGCTTGGAGGCTCCGGCCTaGTTCCCTGACTTCACCCTCTTATCCTTGGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: PRASRRSLEAPA*FPDFTLLSLDK Trigger: CTTGTCCAAGGATAAGAGGGTGAAGTCAGGGAAGCAGGCCGGAGCCTCCAAGCTCCTCCGCGACGCCCGCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CAA 90 bp | TGGGAGAGTCTTTCCACTGGCAGGCCGCGGGCGTCGCGGAGGAGCTaGGAGGCTCCGGCCTGCTTCCCTGACTTCACCCTCTTATCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WESLSTGRPRASRRS*EAPACFPDFTLLSL Trigger: CAAGGATAAGAGGGTGAAGTCAGGGAAGCAGGCCGGAGCCTCCAAGCTCCTCCGCGACGCCCGCGGCCTGCCAGTGGAAAGACTCTCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CCA 72 bp | TCTCCACCAGCGCGGAGTGGGTCCCGTCGCAGTCACTaGCCTCCTGCTCTCCAAGCTGGTCGTTCAACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPPARSGSRRSH*PPALQAGRSTP Trigger: TGGAGTTGAACGACCAGCTTGGAGAGCAGGAGGCCAGTGACTGCGACGGGACCCACTCCGCGCTGGTGGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 72 bp | GTCGCGGAGGAGCTTGGAGGCTCCGGCCTGCTTCCCTaGCTTCACCCTCTTATCCTTGGACAAGTGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VAEELGGSGLLP*LHPLILGQVEP Trigger: GGGCTCCACTTGTCCAAGGATAAGAGGGTGAAGTCAGGGAAGCAGGCCGGAGCCTCCAAGCTCCTCCGCGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CAA 90 bp | GGAGCCTTACCCGAAGACCCCTTCTTGGGCCTGGACAGGGGAGAGTaGACGCGCTTCCGCTTGTGGGAAGATGGTTTGCTCTTCCCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GALPEDPFLGLDRGE*TRFRLWEDGLLFPG Trigger: ACCCGGGAAGAGCAAACCATCTTCCCACAAGCGGAAGCGCGTCAACTCTCCCCTGTCCAGGCCCAAGAAGGGGTCTTCGGGTAAGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CAA 90 bp | ACAGTCTTGGTGGCCCTGTCTGGAGCCTTACCCGAAGACCCCTTCTaGGGCCTGGACAGGGGAGAGTTGACGCGCTTCCGCTTGTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TVLVALSGALPEDPF*GLDRGELTRFRLWE Trigger: TTCCCACAAGCGGAAGCGCGTCAACTCTCCCCTGTCCAGGCCCAAGAAGGGGTCTTCGGGTAAGGCTCCAGACAGGGCCACCAAGACTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 72 bp | GACCTCTTGGCTGAAAGTCGTGGGCCAGAAGACCTGTaGCACAAGGCCCCGGCTGCATGCCTCTTGGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: DLLAESRGPEDL*HKAPAACLLGS Trigger: ACTGCCCAAGAGGCATGCAGCCGGGGCCTTGTGTCACAGGTCTTCTGGCCCACGACTTTCAGCCAAGAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CAA 72 bp | CCCGAAGACCCCTTCTTGGGCCTGGACAGGGGAGAGTaGACGCGCTTCCGCTTGTGGGAAGATGGTTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PEDPFLGLDRGE*TRFRLWEDGLL Trigger: GAGCAAACCATCTTCCCACAAGCGGAAGCGCGTCAACTCTCCCCTGTCCAGGCCCAAGAAGGGGTCTTCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 72 bp | CCGAAGACCCCTTCTTGGGCCTGGACAGGGGAGAGTTaGCGCGCTTCCGCTTGTGGGAAGATGGTTTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PKTPSWAWTGES*RASACGKMVCS Trigger: AGAGCAAACCATCTTCCCACAAGCGGAAGCGCGTCAACTCTCCCCTGTCCAGGCCCAAGAAGGGGTCTTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CAA 72 bp | GGAGAGTTGACGCGCTTCCGCTTGTGGGAAGATGGTTaGCTCTTCCCGGGTTCCAGAGGCCGATGGGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GELTRFRLWEDG*LFPGSRGRWES Trigger: ACTCTCCCATCGGCCTCTGGAACCCGGGAAGAGCAAACCATCTTCCCACAAGCGGAAGCGCGTCAACTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CAA 72 bp | TTGGGCCTGGACAGGGGAGAGTTGACGCGCTTCCGCTaGTGGGAAGATGGTTTGCTCTTCCCGGGTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LGLDRGELTRFR*WEDGLLFPGSR Trigger: TCTGGAACCCGGGAAGAGCAAACCATCTTCCCACAAGCGGAAGCGCGTCAACTCTCCCCTGTCCAGGCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CAA 90 bp | CTGGACAGGGGAGAGTTGACGCGCTTCCGCTTGTGGGAAGATGGTTaGCTCTTCCCGGGTTCCAGAGGCCGATGGGAGAGTCTTTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: LDRGELTRFRLWEDG*LFPGSRGRWESLST Trigger: AGTGGAAAGACTCTCCCATCGGCCTCTGGAACCCGGGAAGAGCAAACCATCTTCCCACAAGCGGAAGCGCGTCAACTCTCCCCTGTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 72 bp | TTGAACTCGTCGATAAACTCCTCACAGTGCAGGAGGTaGTGCTCCGGTTCCCACGTGTCCTCCGTGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LNSSINSSQCRR*CSGSHVSSVLP Trigger: CGGCAGCACGGAGGACACGTGGGAACCGGAGCATCACCTCCTGCACTGTGAGGAGTTTATCGACGAGTTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CCA 72 bp | GGTAGTCCTATAGGACACAGTCTTGGTGGCCCTGTCTaGAGCCTTACCCGAAGACCCCTTCTTGGGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSPIGHSLGGPV*SLTRRPLLGPG Trigger: TCCAGGCCCAAGAAGGGGTCTTCGGGTAAGGCTCCAGACAGGGCCACCAAGACTGTGTCCTATAGGACTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CCA 72 bp | TCCTCTTCACAGGGCTGTGCAGGTTCAGGCCTCCATTaGTCAGAGCAGAGCCAACTCCATTCTCCACCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSSQGCAGSGLH*SEQSQLHSPPA Trigger: CGCTGGTGGAGAATGGAGTTGGCTCTGCTCTGACCAATGGAGGCCTGAACCTGCACAGCCCTGTGAAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 72 bp | CCAGCAGGCGTGAGTCGGATGGTAGCGTATGGTGTCTaGAACCAGGCCTTCTCACTGGCCCATACGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PAGVSRMVAYGV*NQAFSLAHTMS Trigger: TGACATCGTATGGGCCAGTGAGAAGGCCTGGTTTCAGACACCATACGCTACCATCCGACTCACGCCTGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 72 bp | GTGACACAAGGCCCCGGCTGCATGCCTCTTGGGCAGTaGGTTTCCGCCCACAAAACAGCATTTCATTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VTQGPGCMPLGQ*VSAHKTAFHWP Trigger: TGGCCAATGAAATGCTGTTTTGTGGGCGGAAACTCACTGCCCAAGAGGCATGCAGCCGGGGCCTTGTGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CCA 72 bp | CTTCTGCGATTCGAGTGCTCTCCTTTCTCCGGTCGCTaGACAGCCGGCCGATCAGGTAGGAATAGTCTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LLRFECSPFSGR*TAGRSGRNSLV Trigger: GACTAGACTATTCCTACCTGATCGGCCGGCTGTCCAGCGACCGGAGAAAGGAGAGCACTCGAATCGCAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS CAA 90 bp | AGCTTGGAGGCTCCGGCCTGCTTCCCTGACTTCACCCTCTTATCCTaGGACAAGTGGAGCCCGTTGAACTCGTCGATAAACTCCTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SLEAPACFPDFTLLS*DKWSPLNSSINSSQ Trigger: CTGTGAGGAGTTTATCGACGAGTTCAACGGGCTCCACTTGTCCAAGGATAAGAGGGTGAAGTCAGGGAAGCAGGCCGGAGCCTCCAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
||
| CDS TCA 72 bp | TGCTCTCCAAGCTGGTCGTTCAACTCCAGATCCGGCTaGTGGGACCCGTTTCCAAAGTGTGACTCGTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CSPSWSFNSRSG*WDPFPKCDSSF Trigger: GAAGGACGAGTCACACTTTGGAAACGGGTCCCATCAGCCGGATCTGGAGTTGAACGACCAGCTTGGAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS CAA 72 bp | TCCAGCACTGACTTCAGGAAGCTTCGGACCAGGCATTaGGACTCCTCCAAAACCACAGCACTGCAAGATGCC | + |
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Preference number: 6 (lower is better) Translates to: SSTDFRKLRTRH*DSSKTTALQDA Trigger: GGCATCTTGCAGTGCTGTGGTTTTGGAGGAGTCCAAATGCCTGGTCCGAAGCTTCCTGAAGTCAGTGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS CAA 90 bp | CACAGGGCTCGCCGGACTTCCTTCATGATCTCAGGAGTCAGTGCATaGTTATCCGAAGTCTGGCTGGACAGAAGAATGTGTGTGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: HRARRTSFMISGVSA*LSEVWLDRRMCVKP Trigger: GGGCTTCACACACATTCTTCTGTCCAGCCAGACTTCGGATAACAATGCACTGACTCCTGAGATCATGAAGGAAGTCCGGCGAGCCCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS CAA 72 bp | GACTTCACCCTCTTATCCTTGGACAAGTGGAGCCCGTaGAACTCGTCGATAAACTCCTCACAGTGCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: DFTLLSLDKWSP*NSSINSSQCRR Trigger: CCTCCTGCACTGTGAGGAGTTTATCGACGAGTTCAACGGGCTCCACTTGTCCAAGGATAAGAGGGTGAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS CAA 72 bp | TCTTCCTTCCTCACCACGATGTCACGAAACCGACAGTaGCTTTCATTCTGGCGGACGCTGTACCTGAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: SSFLTTMSRNRQ*LSFWRTLYLSL Trigger: AAGGCTCAGGTACAGCGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGTGACATCGTGGTGAGGAAGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS GCA 72 bp | GGCTCGCCGGACTTCCTTCATGATCTCAGGAGTCAGTaGATTGTTATCCGAAGTCTGGCTGGACAGAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: GSPDFLHDLRSQ*IVIRSLAGQKN Trigger: ATTCTTCTGTCCAGCCAGACTTCGGATAACAATGCACTGACTCCTGAGATCATGAAGGAAGTCCGGCGAGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS TCA 72 bp | ACCGACAGTTGCTTTCATTCTGGCGGACGCTGTACCTaGGCCTTTTGTCAAAGACATAGTCCTTCTCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: TDSCFHSGGRCT*AFCQRHSPSPS Trigger: AGACGGAGAAGGACTATGTCTTTGACAAAAGGCTCAGGTACAGCGTCCGCCAGAATGAAAGCAACTGTCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS CCA 72 bp | ATGATCTCAGGAGTCAGTGCATTGTTATCCGAAGTCTaGCTGGACAGAAGAATGTGTGTGAAGCCCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: MISGVSALLSEV*LDRRMCVKPSS Trigger: GGAAGAGGGCTTCACACACATTCTTCTGTCCAGCCAGACTTCGGATAACAATGCACTGACTCCTGAGATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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| CDS CCA 72 bp | GGCCCATTAATGGCTACCACGATGGGTTTCTTAAACTaGATAAAGGCCTTCACGAAGTCCCTGATAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GPLMATTMGFLN*IKAFTKSLIAS Trigger: AGAAGCTATCAGGGACTTCGTGAAGGCCTTTATCCAGTTTAAGAAACCCATCGTGGTAGCCATTAATGGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109102.4 |
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